Pregenerated sensors for CATSPER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038498Ensembl transcript IDs: ENSMUST00000043380.5, ENSMUST00000235380.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATTGGCCTATGCAGGGTaGGGTGGGGGTGGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: YWDLSPTWFWIIPAALGPLAYAG*GGGGGG Trigger: CCCACCCCCACCCCCACCCCACCCTGCATAGGCCAA...TGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | GGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTCCGTCCCGGCCACTTCGTaGAGGCTGGTCAGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: GPQSNMVLDNTSSIRAMSVPATS*RLVRML Trigger: CAGCATCCTGACCAGCCTCCACGAAGTGGCCGGGAC...GGACATGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGTCCGAAGAACCCGGATaGCCCTCAGGGCCCGCATAC | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGSEEPG*PSGPAY Trigger: GTATGCGGGCCCTGAGGGCCATCCGGGTTCTTCGGA...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | CTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCGAAGCGCTTGGGGTCTaGGTCCTGAAACAGTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: LLGPQSNMVLDNTSSIRAEALGV*VLKQCS Trigger: CGAGCACTGTTTCAGGACTCAGACCCCAAGCGCTTC...GGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR GCA 90 bp | GGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTCCAAGTGGAGCACCCGCTaGTTCACTGTCATGTTGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPQSNMVLDNTSSIRAMSKWSTR*FTVMLP Trigger: TGGCAACATGACAGTGAAGCAGCGGGTGCTCCACTT...GGACATGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGGGTGGGGGTGGGATTaGTGGCTTGGGTCTAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRGWGWD*WLGSKL Trigger: TAGCTTAGACCCAAGCCATCAATCCCACCCCCACCC...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | CTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCGAAATGGTGTCTGCATaGTCTCTGTTCTGCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: LLGPQSNMVLDNTSSIRAEMVSA*SLFCWG Trigger: CCCCCAGCAGAACAGAGATCATGCAGACACCATTTC...GGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | GGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTCCGAGAGCGAGTTTATCTaGAGGAGCACAAAGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: GPQSNMVLDNTSSIRAMSESEFI*RSTKSS Trigger: GCTGGACTTTGTGCTCCTTCAGATAAACTCGCTCTC...GGACATGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGTTGGGGTCTGAGTCCTaGAACAGTGCTCGGAGAACC | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGLGSES*NSARRT Trigger: GGTTCTCCGAGCACTGTTTCAGGACTCAGACCCCAA...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | GGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTCCGAACGAAACTTCTGTTaGTGCTGTTCTACCGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GPQSNMVLDNTSSIRAMSERNFC*CCSTAA Trigger: GGCAGCGGTAGAACAGCATCAACAGAAGTTTCGTTC...GGACATGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR GCA 90 bp | TATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCAGATATTCCCGGTGTGTaGCTTCTTGTGGGCCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: YWDLSPTWFWIIPAALGPDIPGV*LLVGPL Trigger: CAGAGGGCCCACAAGAAGGCACACACCGGGAATATC...TGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR GCA 90 bp | TATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGGACCCGGGCAGCTTaGTCCAGCTTCACTTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YWDLSPTWFWIIPAALGPWTRAA*SSFTFS Trigger: AGAGAAAGTGAAGCTGGAGCAAGCTGCCCGGGTCCA...TGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | GGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTCCTGGGGGTTAAGATGGTaGGACCTCTCATGGTATTGT | + |
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Preference number: 4 (lower is better) Translates to: GPQSNMVLDNTSSIRAMSWGLRW*DLSWYC Trigger: ACAATACCATGAGAGGTCTCACCATCTTAACCCCCA...GGACATGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGACTTGTGTGAGAGTTaGGAGGCACTTGGGGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRDLCES*EALGER Trigger: TCGCTCCCCAAGTGCCTCCCAACTCTCACACAAGTC...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGTGTGTGCCTTCTTGTaGGCCCTCTGGGCCTTTTTG | + |
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Preference number: 4 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRVCAFL*ALWAFL Trigger: CAAAAAGGCCCAGAGGGCCCACAAGAAGGCACACAC...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | CTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATTGTCATGGGAGTCTaGGAACTCACGCAAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLGPQSNMVLDNTSSIRAIVMGV*ELTQML Trigger: CAGCATTTGCGTGAGTTCTCAGACTCCCATGACAAT...GGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGTGGCAAGTGTGCTGTaGGACTTGTGTGAGAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRVASVL*DLCESW Trigger: CCAACTCTCACACAAGTCTCACAGCACACTTGCCAC...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGGATCTCTAGCTCAGTaGAAGTCTGGGCCACAAGGA | + |
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Preference number: 4 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRGSLAQ*KSGPQG Trigger: TCCTTGTGGCCCAGACTTTCACTGAGCTAGAGATCC...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR GCA 90 bp | TATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCACCCTCTGGGCCTTTTTaGGTTTCTGAACGTGATCCT | + |
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Preference number: 4 (lower is better) Translates to: YWDLSPTWFWIIPAALGPPSGPF*VSERDP Trigger: AGGATCACGTTCAGAAACGCAAAAAGGCCCAGAGGG...TGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR GCA 90 bp | GGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTCCCACAAAGTCCAGCACTaGCATGACCATGATGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GPQSNMVLDNTSSIRAMSHKVQH*HDHDEE Trigger: TTCTTCATCATGGTCATGGCAGTGCTGGACTTTGTG...GGACATGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGCGATCCCACATGAGATaGAGAGGTGGCAAGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRRSHMR*RGGKCA Trigger: AGCACACTTGCCACCTCTCCATCTCATGTGGGATCG...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGAGCTCAGTGAAAGTCTaGGCCACAAGGATGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGSSVKV*ATRMTV Trigger: CACAGTCATCCTTGTGGCCCAGACTTTCACTGAGCT...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | TATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTTCTGGAAGCGCTTaGGGTCTGAGTCCTGAAACA | + |
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Preference number: 4 (lower is better) Translates to: YWDLSPTWFWIIPAALGPCSGSA*GLSPET Trigger: TGTTTCAGGACTCAGACCCCAAGCGCTTCCAGAACA...TGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGGTGGTAAAGATGTTCTaGAAGCGCTTGGGGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGVVKMF*KRLGSE Trigger: CTCAGACCCCAAGCGCTTCCAGAACATCTTTACCAC...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCAGGGACTGGGTCAGTaGCAATATCATTTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGQGLGQ*QYHLLK Trigger: CTTCAGCAAATGATATTGTCACTGACCCAGTCCCTG...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR GCA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCACCGCTGCCACCAACTaGAGGAACTGGAAGTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSTAATN*RNWKWS Trigger: GCTCCACTTCCAGTTCCTGCAGTTGGTGGCAGCGGT...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR TCA 90 bp | CTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCGACAATATCATTTGCTaGAGACCCAAAAGGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: LLGPQSNMVLDNTSSIRADNIIC*RPKRRW Trigger: CCATCTCCTTTTGGGTCTTCAGCAAATGATATTGTC...GGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGACCATGCTGTTGGTATaGTTGTTGGAACATCCCATG | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGTMLLV*LLEHPM Trigger: CATGGGATGTTCCAACAACCATACCAACAGCATGGT...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCGGTTCACTGGGTCTATaGGGGTCATCTTGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSGSLGL*GSSWWG Trigger: TCCCCACCAAGATGACCCCCATAGACCCAGTGAACC...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGTGGAGCGATAGGAAATaGTGTCTGCATGATCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGWSDRK*CLHDLC Trigger: ACAGAGATCATGCAGACACCATTTCCTATCGCTCCA...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCTGCCGTTGCTCCTTGTaGTGGGGATGTTCACCATGG | + |
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Preference number: 4 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSCRCSL*WGCSPW Trigger: CCATGGTGAACATCCCCACCACAAGGAGCAACGGCA...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGTCAAAGCCCAGGGACTaGGTCAGTGACAATATCATT | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGSKPRD*VSDNII Trigger: AATGATATTGTCACTGACCCAGTCCCTGGGCTTTGA...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCGAGTTGGGAGGCACTTaGGGAGCGATGATGGATATG | + |
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Preference number: 4 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSELGGT*GAMMDM Trigger: CATATCCATCATCGCTCCCCAAGTGCCTCCCAACTC...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGGTCCAGGTTGTTCCATaGGTCATAAAAATACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: LYWDLSPTWFWIIPAALGVQVVP*VIKILQ Trigger: CTGGAGTATTTTTATGACCCATGGAACAACCTGGAC...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR GCA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGATAGGAAATGGTGTCTaGATGATCTCTGTTCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRIGNGV*MISVLL Trigger: CAGCAGAACAGAGATCATGCAGACACCATTTCCTAT...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | TATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATTTTCCCATAGCAATTaGAAGATATTCCCGGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: YWDLSPTWFWIIPAALGPFSHSN*KIFPVC Trigger: ACACACCGGGAATATCTTCCAATTGCTATGGGAAAA...TGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CCA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGCTTCTAGTACATAGATaGAGAGGAAGATGGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRLLVHR*RGRWSP Trigger: TGGACTCCATCTTCCTCTCCATCTATGTACTAGAAG...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS CCA 90 bp | GCCGTGATGGATGGTAAAGATCCACTCAGAGTCCCGGCCACTTCGTaGAGGCTGGTCAGGATGCTGAGCCTCCGAAGAACCCGGATGGCC | + |
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Preference number: 5 (lower is better) Translates to: AVMDGKDPLRVPATS*RLVRMLSLRRTRMA Trigger: GGCCATCCGGGTTCTTCGGAGGCTCAGCATCCTGACCAGCCTCCACGAAGTGGCCGGGACTCTGAGTGGATCTTTACCATCCATCACGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CCA 90 bp | GAGCCCCACTGGCTGTGCTTTTCGATCCCACATGAGATGGAGAGGTaGCAAGTGTGCTGTGAGACTTGTGTGAGAGTTGGGAGGCACTTG | + |
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Preference number: 5 (lower is better) Translates to: EPHWLCFSIPHEMER*QVCCETCVRVGRHL Trigger: CAAGTGCCTCCCAACTCTCACACAAGTCTCACAGCACACTTGCCACCTCTCCATCTCATGTGGGATCGAAAAGCACAGCCAGTGGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS-3UTR CAA 90 bp | GGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTCCTTGATGGGTTGTCCCTaGGTGGCTGCCAGTAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GPQSNMVLDNTSSIRAMSLMGCP*VAASRG Trigger: TCCTCTACTGGCAGCCACCAAGGGACAACCCATCAA...GGACATGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | CTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGGACCCGGGCAGCTaGCTCCAGCTTCACTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: LLGPQSNMVLDNTSSIRAMDPGS*LQLHFL Trigger: GAGAAAGTGAAGCTGGAGCAAGCTGCCCGGGTCCAT...GGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS TCA 90 bp | CAGGGTGAAGAGTGTGGTAAAGATGTTCTGGAAGCGCTTGGGGTCTaGGTCCTGAAACAGTGCTCGGAGAACCACAGAGAAGAGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: QGEECGKDVLEALGV*VLKQCSENHREEEE Trigger: CTCTTCCTCTTCTCTGTGGTTCTCCGAGCACTGTTTCAGGACTCAGACCCCAAGCGCTTCCAGAACATCTTTACCACACTCTTCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS TCA 90 bp | TCCACAAGCTCATCGATGACGTACGCTTGGGAACGAAACTTCTGTTaGTGCTGTTCTACCGCTGCCACCAACTGCAGGAACTGGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: STSSSMTYAWERNFC*CCSTAATNCRNWKW Trigger: CCACTTCCAGTTCCTGCAGTTGGTGGCAGCGGTAGAACAGCATCAACAGAAGTTTCGTTCCCAAGCGTACGTCATCGATGAGCTTGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS GCA 90 bp | AGATATTCCCGGTGTGTGCCTTCTTGTGGGCCCTCTGGGCCTTTTTaGGTTTCTGAACGTGATCCTCCCCTTCACTCAAAGAGGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: RYSRCVPSCGPSGPF*VSERDPPLHSKRLI Trigger: AATCAGCCTCTTTGAGTGAAGGGGAGGATCACGTTCAGAAACGCAAAAAGGCCCAGAGGGCCCACAAGAAGGCACACACCGGGAATATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS TCA 90 bp | AAGAGTGTGGTAAAGATGTTCTGGAAGCGCTTGGGGTCTGAGTCCTaGAACAGTGCTCGGAGAACCACAGAGAAGAGGAAGAGGCAGGTA | + |
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Preference number: 5 (lower is better) Translates to: KSVVKMFWKRLGSES*NSARRTTEKRKRQV Trigger: TACCTGCCTCTTCCTCTTCTCTGTGGTTCTCCGAGCACTGTTTCAGGACTCAGACCCCAAGCGCTTCCAGAACATCTTTACCACACTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS TCA 90 bp | TCTTCAAGGCCTCCTCGGTCATTTGTGCATTGGCGTCTGCTTTGTTaGGATCTGTCAGAGAGTCATCCAACAACTTCTCATGGACCCGGG | + |
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Preference number: 5 (lower is better) Translates to: SSRPPRSFVHWRLLC*DLSESHPTTSHGPG Trigger: CCCGGGTCCATGAGAAGTTGTTGGATGACTCTCTGACAGATCTCAACAAAGCAGACGCCAATGCACAAATGACCGAGGAGGCCTTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS-3UTR CAA 90 bp | GGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCATGTCCCCCAGGGCAATTAGCTaGAGGACTGCTTCTAGTACA | + |
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Preference number: 5 (lower is better) Translates to: GPQSNMVLDNTSSIRAMSPRAIS*RTASST Trigger: TGTACTAGAAGCAGTCCTCAAGCTAATTGCCCTGGG...GGACATGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS CCA 90 bp | GCTTGCTCCAGCTTCACTTTCTCTAGGCCTTTGAGCAACGCCATCTaGAAGTTATCTACCAGGACAGCAATCACCAGGTTGAGGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: ACSSFTFSRPLSNAI*KLSTRTAITRLRKM Trigger: CATCTTCCTCAACCTGGTGATTGCTGTCCTGGTAGATAACTTCCAGATGGCGTTGCTCAAAGGCCTAGAGAAAGTGAAGCTGGAGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS-3UTR CAA 90 bp | CTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCAGGGCCCGCATACTTTaGAAGACTTTGAGAATCCGG | + |
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Preference number: 5 (lower is better) Translates to: LLGPQSNMVLDNTSSIRARARIL*KTLRIR Trigger: CCGGATTCTCAAAGTCTTCAAAAGTATGCGGGCCCT...GGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS CCA 90 bp | ACCATGAAGTACCATTCACCTCGGATCTCTAGCTCAGTGAAAGTCTaGGCCACAAGGATGACTGTGTTGAGGCAGACCACGATGAAGATA | + |
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Preference number: 5 (lower is better) Translates to: TMKYHSPRISSSVKV*ATRMTVLRQTTMKI Trigger: TATCTTCATCGTGGTCTGCCTCAACACAGTCATCCTTGTGGCCCAGACTTTCACTGAGCTAGAGATCCGAGGTGAATGGTACTTCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS CCA 90 bp | ACCATGATGAAGAAGTCACCTCGGATCTCTAGCTCAGTGAAAGTCTaGGCCACAAGGATGACTGTGTTGAGGCAGACCACGATGAAGATA | + |
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Preference number: 5 (lower is better) Translates to: TMMKKSPRISSSVKV*ATRMTVLRQTTMKI Trigger: TATCTTCATCGTGGTCTGCCTCAACACAGTCATCCTTGTGGCCCAGACTTTCACTGAGCTAGAGATCCGAGGTGACTTCTTCATCATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235380.2 |
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| CDS-3UTR CAA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGTCTATGGGGGTCATCTaGGTGGGGATGATGATTCGG | + |
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Preference number: 5 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRSMGVI*VGMMIR Trigger: CCGAATCATCATCCCCACCAAGATGACCCCCATAGA...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGGAACCCACCATGCTGTaGGTATGGTTGTTGGAACAT | + |
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Preference number: 5 (lower is better) Translates to: LYWDLSPTWFWIIPAALGEPTML*VWLLEH Trigger: ATGTTCCAACAACCATACCAACAGCATGGTGGGTTC...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS TCA 90 bp | TGTTCCATGGGTCATAAAAATACTCCAGGCCCAGGGCAATTAGCTTaGGGACTGCTTCTAGTACATAGATGGAGAGGAAGATGGAGTCCA | + |
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Preference number: 5 (lower is better) Translates to: CSMGHKNTPGPGQLA*GLLLVHRWRGRWSP Trigger: TGGACTCCATCTTCCTCTCCATCTATGTACTAGAAGCAGTCCTCAAGCTAATTGCCCTGGGCCTGGAGTATTTTTATGACCCATGGAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | CTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCTGCAATTCATTTTGTaGATGGAACCCACCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: LYWDLSPTWFWIIPAALGLQFIL*MEPTML Trigger: CAGCATGGTGGGTTCCATCAACAAAATGAATTGCAG...CCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCGATGTACCAGGCGCCTaGGGCCCTGTTGTCTATGTA | + |
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Preference number: 5 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSDVPGA*GPVVYV Trigger: TACATAGACAACAGGGCCCAAGGCGCCTGGTACATC...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | TATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGGCCAATACTTTTGAAGACTTaGAGAATCCGGAACAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: YWDLSPTWFWIIPAALGPILLKT*RIRNRL Trigger: CAGCCTGTTCCGGATTCTCAAAGTCTTCAAAAGTAT...TGGCCCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS TCA 90 bp | GACCACGATGAAGATAAAGGTCTCAAAGCCCAGGGACTGGGTCAGTaGCAATATCATTTGCTGAAGACCCAAAAGGAGATGGCTTATTTT | + |
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Preference number: 5 (lower is better) Translates to: DHDEDKGLKAQGLGQ*QYHLLKTQKEMAYF Trigger: AAAATAAGCCATCTCCTTTTGGGTCTTCAGCAAATGATATTGTCACTGACCCAGTCCCTGGGCTTTGAGACCTTTATCTTCATCGTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS-3UTR CAA 90 bp | ACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCAGCATTAGGTGCTTCACTGTCATGTaGCCAAACATTCCCTCAATA | + |
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Preference number: 5 (lower is better) Translates to: TLLGPQSNMVLDNTSSIRCFTVM*PNIPSI Trigger: TATTGAGGGAATGTTTGGCAACATGACAGTGAAGCA...CCTAATGCTGCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCGGAACGAAACTTCTGTaGATGCTGTTCTACCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSGTKLL*MLFYRC Trigger: GCAGCGGTAGAACAGCATCAACAGAAGTTTCGTTCC...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCATGCTGTTGGTATGGTaGTTGGAACATCCCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSMLLVW*LEHPML Trigger: CAGCATGGGATGTTCCAACAACCATACCAACAGCAT...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCACAGCAATCACCAGGTaGAGGAAGATGAAGTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSTAITR*RKMKYW Trigger: CCAGTACTTCATCTTCCTCAACCTGGTGATTGCTGT...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS-3UTR CAA 90 bp | GTTTTAAAAACTCTATTGGGACCTCAGTCCAACATGGTTCTGGATAATACCAGCATGCTGCAATTCATTTaGTTGATGGAACCCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: VLKTLLGPQSNMVLDNTSMLQFI*LMEPTM Trigger: CATGGTGGGTTCCATCAACAAAATGAATTGCAGCAT...GCTGGTATTATCCAGAACCATGTTGGACTGAGGTCCCAATAGAGTTTTTAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS CCA 72 bp | GATGGTAAAGATCCACTCAGAGTCCCGGCCACTTCGTaGAGGCTGGTCAGGATGCTGAGCCTCCGAAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: DGKDPLRVPATS*RLVRMLSLRRT Trigger: GGTTCTTCGGAGGCTCAGCATCCTGACCAGCCTCCACGAAGTGGCCGGGACTCTGAGTGGATCTTTACCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 72 bp | CGAAGAACCCGGATGGCCCTCAGGGCCCGCATACTTTaGAAGACTTTGAGAATCCGGAACAGGCTGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RRTRMALRARIL*KTLRIRNRLWL Trigger: CAACCACAGCCTGTTCCGGATTCTCAAAGTCTTCAAAAGTATGCGGGCCCTGAGGGCCATCCGGGTTCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS GCA 72 bp | TTGGGAACGAAACTTCTGTTGATGCTGTTCTACCGCTaGCACCAACTGCAGGAACTGGAAGTGGAGCACCCG | + |
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Preference number: 6 (lower is better) Translates to: LGTKLLLMLFYR*HQLQELEVEHP Trigger: CGGGTGCTCCACTTCCAGTTCCTGCAGTTGGTGGCAGCGGTAGAACAGCATCAACAGAAGTTTCGTTCCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS GCA 72 bp | GAGTCATCCAACAACTTCTCATGGACCCGGGCAGCTTaGTCCAGCTTCACTTTCTCTAGGCCTTTGAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: ESSNNFSWTRAA*SSFTFSRPLSN Trigger: GTTGCTCAAAGGCCTAGAGAAAGTGAAGCTGGAGCAAGCTGCCCGGGTCCATGAGAAGTTGTTGGATGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CCA 72 bp | TGGCTGTGCTTTTCGATCCCACATGAGATGGAGAGGTaGCAAGTGTGCTGTGAGACTTGTGTGAGAGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: WLCFSIPHEMER*QVCCETCVRVG Trigger: CCCAACTCTCACACAAGTCTCACAGCACACTTGCCACCTCTCCATCTCATGTGGGATCGAAAAGCACAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CCA 72 bp | TACCATTCACCTCGGATCTCTAGCTCAGTGAAAGTCTaGGCCACAAGGATGACTGTGTTGAGGCAGACCACG | + |
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Preference number: 6 (lower is better) Translates to: YHSPRISSSVKV*ATRMTVLRQTT Trigger: CGTGGTCTGCCTCAACACAGTCATCCTTGTGGCCCAGACTTTCACTGAGCTAGAGATCCGAGGTGAATGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS CCA 72 bp | AAGAAGTCACCTCGGATCTCTAGCTCAGTGAAAGTCTaGGCCACAAGGATGACTGTGTTGAGGCAGACCACG | + |
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Preference number: 6 (lower is better) Translates to: KKSPRISSSVKV*ATRMTVLRQTT Trigger: CGTGGTCTGCCTCAACACAGTCATCCTTGTGGCCCAGACTTTCACTGAGCTAGAGATCCGAGGTGACTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235380.2 |
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| CDS CAA 90 bp | CGGATCTCTAGCTCAGTGAAAGTCTGGGCCACAAGGATGACTGTGTaGAGGCAGACCACGATGAAGATAAAGGTCTCAAAGCCCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RISSSVKVWATRMTV*RQTTMKIKVSKPRD Trigger: GTCCCTGGGCTTTGAGACCTTTATCTTCATCGTGGTCTGCCTCAACACAGTCATCCTTGTGGCCCAGACTTTCACTGAGCTAGAGATCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 90 bp | GTCCACAAGCTCATCGATGACGTACGCTTGGGAACGAAACTTCTGTaGATGCTGTTCTACCGCTGCCACCAACTGCAGGAACTGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VHKLIDDVRLGTKLL*MLFYRCHQLQELEV Trigger: CACTTCCAGTTCCTGCAGTTGGTGGCAGCGGTAGAACAGCATCAACAGAAGTTTCGTTCCCAAGCGTACGTCATCGATGAGCTTGTGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 90 bp | TCCAGCCTCAAATGCCATGTCCACAAGCTCATCGATGACGTACGCTaGGGAACGAAACTTCTGTTGATGCTGTTCTACCGCTGCCACCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSLKCHVHKLIDDVR*GTKLLLMLFYRCHQ Trigger: TTGGTGGCAGCGGTAGAACAGCATCAACAGAAGTTTCGTTCCCAAGCGTACGTCATCGATGAGCTTGTGGACATGGCATTTGAGGCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS TCA 72 bp | GTAAAGATGTTCTGGAAGCGCTTGGGGTCTGAGTCCTaGAACAGTGCTCGGAGAACCACAGAGAAGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VKMFWKRLGSES*NSARRTTEKRK Trigger: CTTCCTCTTCTCTGTGGTTCTCCGAGCACTGTTTCAGGACTCAGACCCCAAGCGCTTCCAGAACATCTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS TCA 72 bp | GAGTGTGGTAAAGATGTTCTGGAAGCGCTTGGGGTCTaGGTCCTGAAACAGTGCTCGGAGAACCACAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ECGKDVLEALGV*VLKQCSENHRE Trigger: TTCTCTGTGGTTCTCCGAGCACTGTTTCAGGACTCAGACCCCAAGCGCTTCCAGAACATCTTTACCACACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 72 bp | CTCATCGATGACGTACGCTTGGGAACGAAACTTCTGTaGATGCTGTTCTACCGCTGCCACCAACTGCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LIDDVRLGTKLL*MLFYRCHQLQE Trigger: TTCCTGCAGTTGGTGGCAGCGGTAGAACAGCATCAACAGAAGTTTCGTTCCCAAGCGTACGTCATCGATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 90 bp | ATCTTCAAGGCCTCCTCGGTCATTTGTGCATTGGCGTCTGCTTTGTaGAGATCTGTCAGAGAGTCATCCAACAACTTCTCATGGACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: IFKASSVICALASAL*RSVRESSNNFSWTR Trigger: CCGGGTCCATGAGAAGTTGTTGGATGACTCTCTGACAGATCTCAACAAAGCAGACGCCAATGCACAAATGACCGAGGAGGCCTTGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS GCA 72 bp | ATAGAACCGCGTACTGGAGCGATAGGAAATGGTGTCTaGATGATCTCTGTTCTGCTGGGGGTTAAGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IEPRTGAIGNGV*MISVLLGVKMV Trigger: CACCATCTTAACCCCCAGCAGAACAGAGATCATGCAGACACCATTTCCTATCGCTCCAGTACGCGGTTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS GCA 72 bp | GAGCGAGTTTATCTGAAGGAGCACAAAGTCCAGCACTaGCATGACCATGATGAAGAAGTCACCTCGGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: ERVYLKEHKVQH*HDHDEEVTSDL Trigger: GAGATCCGAGGTGACTTCTTCATCATGGTCATGGCAGTGCTGGACTTTGTGCTCCTTCAGATAAACTCGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235380.2 |
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| CDS GCA 72 bp | GAGCGAGTTTATCTGAAGGAGCACAAAGTCCAGCACTaGCATGACCATGATGAAGAAGTCCAGGTTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ERVYLKEHKVQH*HDHDEEVQVVP Trigger: TGGAACAACCTGGACTTCTTCATCATGGTCATGGCAGTGCTGGACTTTGTGCTCCTTCAGATAAACTCGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS CCA 72 bp | AGCTTCACTTTCTCTAGGCCTTTGAGCAACGCCATCTaGAAGTTATCTACCAGGACAGCAATCACCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFTFSRPLSNAI*KLSTRTAITRL Trigger: CAACCTGGTGATTGCTGTCCTGGTAGATAACTTCCAGATGGCGTTGCTCAAAGGCCTAGAGAAAGTGAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 72 bp | AGCTCAGTGAAAGTCTGGGCCACAAGGATGACTGTGTaGAGGCAGACCACGATGAAGATAAAGGTCTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SSVKVWATRMTV*RQTTMKIKVSK Trigger: CTTTGAGACCTTTATCTTCATCGTGGTCTGCCTCAACACAGTCATCCTTGTGGCCCAGACTTTCACTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 72 bp | GCCTCCTCGGTCATTTGTGCATTGGCGTCTGCTTTGTaGAGATCTGTCAGAGAGTCATCCAACAACTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ASSVICALASAL*RSVRESSNNFS Trigger: TGAGAAGTTGTTGGATGACTCTCTGACAGATCTCAACAAAGCAGACGCCAATGCACAAATGACCGAGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 72 bp | AACTGGAAGTGGAGCACCCGCTGCTTCACTGTCATGTaGCCAAACATTCCCTCAATAAGCTGCATCTTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: NWKWSTRCFTVM*PNIPSISCIFK Trigger: CTTGAAGATGCAGCTTATTGAGGGAATGTTTGGCAACATGACAGTGAAGCAGCGGGTGCTCCACTTCCAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 72 bp | AAATGCCATGTCCACAAGCTCATCGATGACGTACGCTaGGGAACGAAACTTCTGTTGATGCTGTTCTACCGC | + |
|
Preference number: 6 (lower is better) Translates to: KCHVHKLIDDVR*GTKLLLMLFYR Trigger: GCGGTAGAACAGCATCAACAGAAGTTTCGTTCCCAAGCGTACGTCATCGATGAGCTTGTGGACATGGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS TCA 72 bp | CCTCCTCGGTCATTTGTGCATTGGCGTCTGCTTTGTTaGGATCTGTCAGAGAGTCATCCAACAACTTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PPRSFVHWRLLC*DLSESHPTTSH Trigger: ATGAGAAGTTGTTGGATGACTCTCTGACAGATCTCAACAAAGCAGACGCCAATGCACAAATGACCGAGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS GCA 72 bp | AATAAGCTGCATCTTCAAGGCCTCCTCGGTCATTTGTaGATTGGCGTCTGCTTTGTTGAGATCTGTCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: NKLHLQGLLGHL*IGVCFVEICQR Trigger: TCTCTGACAGATCTCAACAAAGCAGACGCCAATGCACAAATGACCGAGGAGGCCTTGAAGATGCAGCTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS TCA 72 bp | GAAGATAAAGGTCTCAAAGCCCAGGGACTGGGTCAGTaGCAATATCATTTGCTGAAGACCCAAAAGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: EDKGLKAQGLGQ*QYHLLKTQKEM Trigger: CATCTCCTTTTGGGTCTTCAGCAAATGATATTGTCACTGACCCAGTCCCTGGGCTTTGAGACCTTTATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043380.5 ENSMUST00000235380.2 |
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| CDS CAA 72 bp | ATTTTGTTGATGGAACCCACCATGCTGTTGGTATGGTaGTTGGAACATCCCATGCTGAGGAGAATCGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: ILLMEPTMLLVW*LEHPMLRRIVI Trigger: TATTACGATTCTCCTCAGCATGGGATGTTCCAACAACCATACCAACAGCATGGTGGGTTCCATCAACAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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| CDS TCA 72 bp | ATAGGAATGATGGGAGAAAGCATTGTCATGGGAGTCTaGGAACTCACGCAAATGCTGCAATTCATTTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IGMMGESIVMGV*ELTQMLQFILL Trigger: CAACAAAATGAATTGCAGCATTTGCGTGAGTTCTCAGACTCCCATGACAATGCTTTCTCCCATCATTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043380.5 |
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