Pregenerated sensors for CATIP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073650Ensembl transcript IDs: ENSMUST00000097697.8, ENSMUST00000128445.8, ENSMUST00000191010.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCGATAACTCGCGTGGCTaGGGCGCAGCTGCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EAAAPARPSLRILAAHLVDNSRG*GAAAPS Trigger: GGAAGGAGCAGCTGCGCCTCAGCCACGCGAGTTATC...GACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCGCGCTGCAAAGGGCCTaGAGTGCTCGGCAGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: EAAAPARPSLRILAAHLVALQRA*SARQRK Trigger: CTTTCGCTGCCGAGCACTTCAGGCCCTTTGCAGCGC...GACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR TCA 90 bp | GCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTGATAACTCGCGTGGCTaGGGCGCAGCTGCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AAAPARPSLRILAAHLVFDNSRG*GAAAPS Trigger: GGAAGGAGCAGCTGCGCCTCAGCCACGCGAGTTATC...AAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | ACTGAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAAGTGACCACGTCCTCTaGCCGGCGGAGCAGCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: TEAAAPARPSLRILAAHLSDHVL*PAEQQE Trigger: TTCCTGCTGCTCCGCCGGCCAGAGGACGTGGTCACT...TAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | GCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTGAGTGCGGAAAGGGCTaGGCTGGTGTGAGGATCGCA | + |
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Preference number: 4 (lower is better) Translates to: AAAPARPSLRILAAHLVFECGKG*AGVRIA Trigger: TGCGATCCTCACACCAGCCCAGCCCTTTCCGCACTC...AAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR TCA 90 bp | CGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTGCGCTGCAAAGGGCCTaGAGTGCTCGGCAGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: RSPSQAQSPDSSRPPSLFALQRA*SARQRK Trigger: CTTTCGCTGCCGAGCACTTCAGGCCCTTTGCAGCGC...AAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | ACTGAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTACCTCATTCTCCAGAGTaGGGAAAGGGCTGGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TEAAAPARPSLRILAAHLPHSPE*GKGWAG Trigger: ACCAGCCCAGCCCTTTCCGCACTCTGGAGAATGAGG...TAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | CCCACTGAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTGGTCACAACAAACTaGCCATCCTGCTTCAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PTEAAAPARPSLRILAAHLVTTN*PSCFRT Trigger: CGTCCTGAAGCAGGATGGCCAGTTTGTTGTGACCAG...GTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTCAGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | CCCACTGAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACACAAACTGGCCATCCTaGTTCAGGACGCTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: PTEAAAPARPSLRILAAHTNWPS*FRTLIF Trigger: GAAGATGAGCGTCCTGAAGCAGGATGGCCAGTTTGT...GTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTCAGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | ACTGAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGGCAGGAGAAGGGGATaGCCTCTTCAGAGTGTATGG | + |
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Preference number: 4 (lower is better) Translates to: TEAAAPARPSLRILAAHLGRRRG*PLQSVW Trigger: CCATACACTCTGAAGAGGGCATCCCCTTCTCCTGCC...TAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | AGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTCGAAGTGACCACGTCCTCTaGCCGGCGGAGCAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSQAQSPDSSRPPSLFRSDHVL*PAEQQE Trigger: TTCCTGCTGCTCCGCCGGCCAGAGGACGTGGTCACT...TCGAAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | GCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTCGAGTGCGGAAAGGGCTaGGCTGGTGTGAGGATCGCA | + |
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Preference number: 4 (lower is better) Translates to: AAPARPSLRILAAHLVFFECGKG*AGVRIA Trigger: TGCGATCCTCACACCAGCCCAGCCCTTTCCGCACTC...GAAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | GCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTCAGCACCACATTGGCTaGACTGGAGACAAAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: AAAPARPSLRILAAHLVFQHHIG*TGDKAL Trigger: AAGGGCTTTGTCTCCAGTGCAGCCAATGTGGTGCTG...AAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | GCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTCCCTCATTCTCCAGAGTaGGGAAAGGGCTGGGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: AAPARPSLRILAAHLVFFPHSPE*GKGWAG Trigger: ACCAGCCCAGCCCTTTCCGCACTCTGGAGAATGAGG...GAAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | CGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTTCCAGCCCTGGGTGGTaGAGAGAAGCTGTCTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RSPSQAQSPDSSRPPSLFSSPGW*REAVSP Trigger: TGGAGAGACAGCTTCTCTGCACCACCCAGGGCTGGA...AAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | GAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCGATGATACAACATCCTaGAGAGCCCACCTGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: EAAAPARPSLRILAAHLVDDTTS*RAHLDS Trigger: AGAGTCCAGGTGGGCTCTCCAGGATGTTGTATCATC...GACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | CGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTTCCTCCAGCCCTGGGTaGTGCAGAGAAGCTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: RSPSQAQSPDSSRPPSLFSSSPG*CREAVS Trigger: AGAGACAGCTTCTCTGCACCACCCAGGGCTGGAGGA...AAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191010.2 |
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| CDS-3UTR TCA 90 bp | CGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTATGGTCAGTTCTCCCTaGGGTTCCCCTGTGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: RSPSQAQSPDSSRPPSLFMVSSP*GSPVSE Trigger: CTCAGACACAGGGGAACCTCAGGGAGAACTGACCAT...AAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | AGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTACAAACTGGCCATCCTaGTTCAGGACGCTCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSPSQAQSPDSSRPPSLTNWPS*FRTLIF Trigger: GAAGATGAGCGTCCTGAAGCAGGATGGCCAGTTTGT...AAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | CGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTGGCAGGAGAAGGGGATaGCCTCTTCAGAGTGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RSPSQAQSPDSSRPPSLFGRRRG*PLQSVW Trigger: CCATACACTCTGAAGAGGGCATCCCCTTCTCCTGCC...AAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR TCA 90 bp | AGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTCGAATGGTCAGTTCTCCCTaGGGTTCCCCTGTGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPSQAQSPDSSRPPSLFRMVSSP*GSPVSE Trigger: CTCAGACACAGGGGAACCTCAGGGAGAACTGACCAT...TCGAAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR TCA 90 bp | AGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTAACTTGATGAACTCCTaGCTGTGCTGTTCCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: SRSPSQAQSPDSSRPPSLNLMNS*LCCSIS Trigger: GCTGATGGAACAGCACAGTCAGGAGTTCATCAAGTT...AAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | CGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTTCAGCAGCACCACATTaGCTGCACTGGAGACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RSPSQAQSPDSSRPPSLFSAAPH*LHWRQS Trigger: GCTTTGTCTCCAGTGCAGCCAATGTGGTGCTGCTGA...AAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCG 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | GAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCATGAACATTTTAGCCTaGTGGTTGCCCACTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: EAAAPARPSLRILAAHLVMNILA*WLPTWI Trigger: AATCCAAGTGGGCAACCAGCAGGCTAAAATGTTCAT...GACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR TCA 90 bp | GCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTCAACTTGATGAACTCCTaGCTGTGCTGTTCCATCAGC | + |
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Preference number: 4 (lower is better) Translates to: AAPARPSLRILAAHLVFFNLMNS*LCCSIS Trigger: GCTGATGGAACAGCACAGTCAGGAGTTCATCAAGTT...GAAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR TCA 90 bp | GAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTGGAGACAAAGCCCTTaGATGTTTTATAGGGGAAAA | + |
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Preference number: 4 (lower is better) Translates to: EAAAPARPSLRILAAHLVWRQSP*MFYRGK Trigger: TTTTCCCCTATAAAACATTCAAGGGCTTTGTCTCCA...GACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | CCCACTGAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACTCAGAGTGTATGGTTTaGTCCACGATGAACATTTTA | + |
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Preference number: 4 (lower is better) Translates to: PTEAAAPARPSLRILAAHSECMV*STMNIL Trigger: TAAAATGTTCATCGTGGAGCAAACCATACACTCTGA...GTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CCA 90 bp | AGAGTAGAACTGGGAAAGGACCCTGCTTATCTCCCACTGAAGCCGCAGCCCCAGCTGGTCACAACAAACTaGCCATCCTGCTTCAGGACG | + |
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Preference number: 4 (lower is better) Translates to: RVELGKDPAYLPLKPQPQLVTTN*PSCFRT Trigger: CGTCCTGAAGCAGGATGGCCAGTTTGTTGTGACCAG...CTGGGGCTGCGGCTTCAGTGGGAGATAAGCAGGGTCCTTTCCCAGTTCTACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097697.8 |
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| CDS-3UTR CCA 90 bp | AGAGTAGAACTGGGAAAGGACCCTGCTTATCTCCCACTGAAGCCGCAGCCCCAGTCAGCAGCACCACATTaGCTGCACTGGAGACAAAGC | + |
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Preference number: 4 (lower is better) Translates to: RVELGKDPAYLPLKPQPQSAAPH*LHWRQS Trigger: GCTTTGTCTCCAGTGCAGCCAATGTGGTGCTGCTGA...CTGGGGCTGCGGCTTCAGTGGGAGATAAGCAGGGTCCTTTCCCAGTTCTACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097697.8 |
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| CDS-3UTR GCA 90 bp | ACTGAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTATCAGAGTGTATGGTTTaGTCCACGATGAACATTTTA | + |
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Preference number: 4 (lower is better) Translates to: TEAAAPARPSLRILAAHLSECMV*STMNIL Trigger: TAAAATGTTCATCGTGGAGCAAACCATACACTCTGA...TAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR GCA 90 bp | AGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTCGAATGAACATTTTAGCCTaGTGGTTGCCCACTTGGATT | + |
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Preference number: 4 (lower is better) Translates to: SPSQAQSPDSSRPPSLFRMNILA*WLPTWI Trigger: AATCCAAGTGGGCAACCAGCAGGCTAAAATGTTCAT...TCGAAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS GCA 90 bp | CGCAGGGCTGGGATAGGCGAGCGCAGCGCTGCAAAGGGCCTGAAGTaGTCGGCAGCGAAAGTGACCACGTCCTCTGGCCGGCGGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RRAGIGERSAAKGLK*SAAKVTTSSGRRSS Trigger: GCTGCTCCGCCGGCCAGAGGACGTGGTCACTTTCGCTGCCGAGCACTTCAGGCCCTTTGCAGCGCTGCGCTCGCCTATCCCAGCCCTGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS GCA 90 bp | CCCTCCGAGTCTAAGGCTAGGAAGCGAGCCCCACTGGGCACCGACTaGTGCCAGGCCATCACTCTCAGCAGCACCACATTGGCTGCACTG | + |
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Preference number: 5 (lower is better) Translates to: PSESKARKRAPLGTD*CQAITLSSTTLAAL Trigger: CAGTGCAGCCAATGTGGTGCTGCTGAGAGTGATGGCCTGGCAGCAGTCGGTGCCCAGTGGGGCTCGCTTCCTAGCCTTAGACTCGGAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 90 bp | GGCAGAGCTTGCCCTCCGAGTCTAAGGCTAGGAAGCGAGCCCCACTaGGCACCGACTGCTGCCAGGCCATCACTCTCAGCAGCACCACAT | + |
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Preference number: 5 (lower is better) Translates to: GRACPPSLRLGSEPH*APTAARPSLSAAPH Trigger: ATGTGGTGCTGCTGAGAGTGATGGCCTGGCAGCAGTCGGTGCCCAGTGGGGCTCGCTTCCTAGCCTTAGACTCGGAGGGCAAGCTCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 90 bp | GCCTCCTCTTCTTCCTCATTCTCCAGAGTGCGGAAAGGGCTGGGCTaGTGTGAGGATCGCAGGGCTGGGATAGGCGAGCGCAGCGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: ASSSSSFSRVRKGLG*CEDRRAGIGERSAA Trigger: TGCAGCGCTGCGCTCGCCTATCCCAGCCCTGCGATCCTCACACCAGCCCAGCCCTTTCCGCACTCTGGAGAATGAGGAAGAAGAGGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CAA 90 bp | GAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCCTCAGCAGCACCACATaGGCTGCACTGGAGACAAAG | + |
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Preference number: 5 (lower is better) Translates to: EAAAPARPSLRILAAHLVLSSTT*AALETK Trigger: CTTTGTCTCCAGTGCAGCCAATGTGGTGCTGCTGAG...GACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS TCA 90 bp | CTCTTCTTCCTCATTCTCCAGAGTGCGGAAAGGGCTGGGCTGGTGTaGGGATCGCAGGGCTGGGATAGGCGAGCGCAGCGCTGCAAAGGG | + |
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Preference number: 5 (lower is better) Translates to: LFFLILQSAERAGLV*GSQGWDRRAQRCKG Trigger: CCCTTTGCAGCGCTGCGCTCGCCTATCCCAGCCCTGCGATCCTCACACCAGCCCAGCCCTTTCCGCACTCTGGAGAATGAGGAAGAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS GCA 90 bp | TCCGAGTCTAAGGCTAGGAAGCGAGCCCCACTGGGCACCGACTGCTaGCAGGCCATCACTCTCAGCAGCACCACATTGGCTGCACTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SESKARKRAPLGTDC*QAITLSSTTLAALE Trigger: CTCCAGTGCAGCCAATGTGGTGCTGCTGAGAGTGATGGCCTGGCAGCAGTCGGTGCCCAGTGGGGCTCGCTTCCTAGCCTTAGACTCGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS-3UTR CAA 90 bp | AGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTCTCAGCAGCACCACATaGGCTGCACTGGAGACAAAG | + |
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Preference number: 5 (lower is better) Translates to: SRSPSQAQSPDSSRPPSLLSSTT*AALETK Trigger: CTTTGTCTCCAGTGCAGCCAATGTGGTGCTGCTGAG...AAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CAA 90 bp | ACTGAAGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGGTTGCCCACTTGGATaGTCTGGAAACCCAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: TEAAAPARPSLRILAAHLGCPLG*SGNPGI Trigger: AATCCCTGGGTTTCCAGACAATCCAAGTGGGCAACC...TAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCTTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS CCA 90 bp | GAAGGAGTTGAGAAAGCTGATGGCTTCAGCATTGGCTTCTGGGAATaGCTGCTGCTGCTGCCGCTGCTGCTGCTGTTGCTGCAGCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: EGVEKADGFSIGFWE*LLLLPLLLLLLQLA Trigger: GGCCAGCTGCAGCAACAGCAGCAGCAGCGGCAGCAGCAGCAGCCATTCCCAGAAGCCAATGCTGAAGCCATCAGCTTTCTCAACTCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS-3UTR CAA 90 bp | AGCCGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTACATCGTTGTCATCATaGTCGACACTGAGGTTGTCG | + |
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Preference number: 5 (lower is better) Translates to: SRSPSQAQSPDSSRPPSLTSLSS*STLRLS Trigger: CGACAACCTCAGTGTCGACAATGATGACAACGATGT...AAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS TCA 90 bp | TCGTCCTTGTACTTCCCCCTCTGCACCTCAATGGTCAGTTCTCCCTaGGGTTCCCCTGTGTCTGAGAGGATGGCCAGAGTCTCCGGGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSLYFPLCTSMVSSP*GSPVSERMARVSGK Trigger: CTTCCCGGAGACTCTGGCCATCCTCTCAGACACAGGGGAACCTCAGGGAGAACTGACCATTGAGGTGCAGAGGGGGAAGTACAAGGACGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS GCA 90 bp | GAGTTGAGAAAGCTGATGGCTTCAGCATTGGCTTCTGGGAATGGCTaGTGCTGCTGCCGCTGCTGCTGCTGTTGCTGCAGCTGGCCTAAG | + |
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Preference number: 5 (lower is better) Translates to: ELRKLMASALASGNG*CCCRCCCCCCSWPK Trigger: CTTAGGCCAGCTGCAGCAACAGCAGCAGCAGCGGCAGCAGCAGCAGCCATTCCCAGAAGCCAATGCTGAAGCCATCAGCTTTCTCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS CCA 90 bp | CCTCAATGGTCAGTTCTCCCTGAGGTTCCCCTGTGTCTGAGAGGATaGCCAGAGTCTCCGGGAAGAACAGGAGCATATCCTCCAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PQWSVLPEVPLCLRG*PESPGRTGAYPPAQ Trigger: CTGGGCTGGAGGATATGCTCCTGTTCTTCCCGGAGACTCTGGCCATCCTCTCAGACACAGGGGAACCTCAGGGAGAACTGACCATTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097697.8 |
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| CDS CCA 90 bp | GATTTGTCTAGGAAGCCGCGGCTAGAGGCGTGGACCAGTAGACAGTaGGTCAGGATCCCTATGTCGTCCTTGTACTTCCCCCTCTGCACC | + |
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Preference number: 5 (lower is better) Translates to: DLSRKPRLEAWTSRQ*VRIPMSSLYFPLCT Trigger: GGTGCAGAGGGGGAAGTACAAGGACGACATAGGGATCCTGACCCACTGTCTACTGGTCCACGCCTCTAGCCGCGGCTTCCTAGACAAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 90 bp | GAGCTCCCACACAGCGATTTGTCTAGGAAGCCGCGGCTAGAGGCGTaGACCAGTAGACAGTGGGTCAGGATCCCTATGTCGTCCTTGTAC | + |
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Preference number: 5 (lower is better) Translates to: ELPHSDLSRKPRLEA*TSRQWVRIPMSSLY Trigger: GTACAAGGACGACATAGGGATCCTGACCCACTGTCTACTGGTCCACGCCTCTAGCCGCGGCTTCCTAGACAAATCGCTGTGTGGGAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 90 bp | CCTCAATGGTCAGTTCTCCCTGAGGTTCCCCTGTGTCTGAGAGGATaGCCAGAGTCTCCGGGAAGAACAGGAGCATATCCTCCAGCCCTC | + |
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Preference number: 5 (lower is better) Translates to: PQWSVLPEVPLCLRG*PESPGRTGAYPPAL Trigger: GAGGGCTGGAGGATATGCTCCTGTTCTTCCCGGAGACTCTGGCCATCCTCTCAGACACAGGGGAACCTCAGGGAGAACTGACCATTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS CCA 90 bp | CCTCAATGGTCAGTTCTCCCTGAGGTTCCCCTGTGTCTGAGAGGATaGCCAGAGTCTCCGGGAAGAACAGGAGCATATCCTCCAGCCCTG | + |
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Preference number: 5 (lower is better) Translates to: PQWSVLPEVPLCLRG*PESPGRTGAYPPAL Trigger: CAGGGCTGGAGGATATGCTCCTGTTCTTCCCGGAGACTCTGGCCATCCTCTCAGACACAGGGGAACCTCAGGGAGAACTGACCATTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191010.2 |
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| CDS-3UTR CAA 90 bp | CGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTATTTTAGCCTGCTGGTaGCCCACTTGGATTGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPSQAQSPDSSRPPSLFILACW*PTWIVW Trigger: CCAGACAATCCAAGTGGGCAACCAGCAGGCTAAAAT...AAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS TCA 90 bp | CCTCTGCACCTCAATGGTCAGTTCTCCCTGAGGTTCCCCTGTGTCTaGGAGGATGGCCAGAGTCTCCGGGAAGAACAGGAGCATATCCTC | + |
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Preference number: 5 (lower is better) Translates to: PLHLNGQFSLRFPCV*EDGQSLREEQEHIL Trigger: GAGGATATGCTCCTGTTCTTCCCGGAGACTCTGGCCATCCTCTCAGACACAGGGGAACCTCAGGGAGAACTGACCATTGAGGTGCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGAACTGGGAAAGGACCCTGCTTATCTCCCACTGAAGCCGCAGCCCGGTTGCCCACTTGGATaGTCTGGAAACCCAGGGATT | + |
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Preference number: 5 (lower is better) Translates to: DRVELGKDPAYLPLKPQPGCPLG*SGNPGI Trigger: AATCCCTGGGTTTCCAGACAATCCAAGTGGGCAACC...GGGCTGCGGCTTCAGTGGGAGATAAGCAGGGTCCTTTCCCAGTTCTACTCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097697.8 |
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| CDS-3UTR CAA 90 bp | CGCAGCCCCAGCCAGGCCCAGTCTCCGGATTCTAGCCGCCCACCTAGTCTTTTTTCATTGTCGTCAACATaGGCAATGTCGTCATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: RSPSQAQSPDSSRPPSLFSLSST*AMSSSS Trigger: CGATGATGACGACATTGCCAATGTTGACGACAATGA...AAAAAGACTAGGTGGGCGGCTAGAATCCGGAGACTGGGCCTGGCTGGGGCTGCG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS CCA 90 bp | ATCCTCCTCTCTTATGAGGGGCATCTTGGTGATGATACAACATCCTaGAGAGCCCACCTGGACTCTCTTAGCCAGGTGCCCATCAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: ILLSYEGHLGDDTTS*RAHLDSLSQVPIRE Trigger: CTCCCTGATGGGCACCTGGCTAAGAGAGTCCAGGTGGGCTCTCCAGGATGTTGTATCATCACCAAGATGCCCCTCATAAGAGAGGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS-3UTR CAA 90 bp | GACAGAGTAGAACTGGGAAAGGACCCTGCTTATCTCCCACTGAAGCCGCAGCCCACATCGTTGTCATCATaGTCGACACTGAGGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DRVELGKDPAYLPLKPQPTSLSS*STLRLS Trigger: CGACAACCTCAGTGTCGACAATGATGACAACGATGT...GGGCTGCGGCTTCAGTGGGAGATAAGCAGGGTCCTTTCCCAGTTCTACTCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097697.8 |
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| CDS TCA 90 bp | TATAGGGGAAAACAGAGACTCCGGTCTTCGTTTCCTCACCCTCCTTaGCACTTCTGGTCACAACAAACTGGCCATCCTGCTTCAGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: YRGKQRLRSSFPHPP*HFWSQQTGHPASGR Trigger: GCGTCCTGAAGCAGGATGGCCAGTTTGTTGTGACCAGAAGTGTCAAGGAGGGTGAGGAAACGAAGACCGGAGTCTCTGTTTTCCCCTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS GCA 72 bp | GGGATAGGCGAGCGCAGCGCTGCAAAGGGCCTGAAGTaGTCGGCAGCGAAAGTGACCACGTCCTCTGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GIGERSAAKGLK*SAAKVTTSSGR Trigger: CCGGCCAGAGGACGTGGTCACTTTCGCTGCCGAGCACTTCAGGCCCTTTGCAGCGCTGCGCTCGCCTATCCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS TCA 72 bp | GGGCCTCGGGGTGATGCCGCAGATAACTCGCGTGGCTaGGGCGCAGCTGCTCCTTCCGGTCCAGGAATTTCG | + |
|
Preference number: 6 (lower is better) Translates to: GPRGDAADNSRG*GAAAPSGPGIS Trigger: CGAAATTCCTGGACCGGAAGGAGCAGCTGCGCCTCAGCCACGCGAGTTATCTGCGGCATCACCCCGAGGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS TCA 72 bp | CTCATTCTCCAGAGTGCGGAAAGGGCTGGGCTGGTGTaGGGATCGCAGGGCTGGGATAGGCGAGCGCAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LILQSAERAGLV*GSQGWDRRAQR Trigger: GCGCTGCGCTCGCCTATCCCAGCCCTGCGATCCTCACACCAGCCCAGCCCTTTCCGCACTCTGGAGAATGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS CCA 72 bp | TGCCCTCCGAGTCTAAGGCTAGGAAGCGAGCCCCACTaGGCACCGACTGCTGCCAGGCCATCACTCTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CPPSLRLGSEPH*APTAARPSLSA Trigger: TGCTGAGAGTGATGGCCTGGCAGCAGTCGGTGCCCAGTGGGGCTCGCTTCCTAGCCTTAGACTCGGAGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 72 bp | CCTGAAGTGCTCGGCAGCGAAAGTGACCACGTCCTCTaGCCGGCGGAGCAGCAGGAACAGCAGGAAGTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: PEVLGSESDHVL*PAEQQEQQEVG Trigger: TCCGACTTCCTGCTGTTCCTGCTGCTCCGCCGGCCAGAGGACGTGGTCACTTTCGCTGCCGAGCACTTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS GCA 72 bp | AAGGCTAGGAAGCGAGCCCCACTGGGCACCGACTGCTaGCAGGCCATCACTCTCAGCAGCACCACATTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: KARKRAPLGTDC*QAITLSSTTLA Trigger: AGCCAATGTGGTGCTGCTGAGAGTGATGGCCTGGCAGCAGTCGGTGCCCAGTGGGGCTCGCTTCCTAGCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS GCA 72 bp | TCTAAGGCTAGGAAGCGAGCCCCACTGGGCACCGACTaGTGCCAGGCCATCACTCTCAGCAGCACCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: SKARKRAPLGTD*CQAITLSSTTL Trigger: CAATGTGGTGCTGCTGAGAGTGATGGCCTGGCAGCAGTCGGTGCCCAGTGGGGCTCGCTTCCTAGCCTTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS GCA 72 bp | GCTTCAGCATTGGCTTCTGGGAATGGCTGCTGCTGCTaGCGCTGCTGCTGCTGTTGCTGCAGCTGGCCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASALASGNGCCC*RCCCCCCSWPK Trigger: CTTAGGCCAGCTGCAGCAACAGCAGCAGCAGCGGCAGCAGCAGCAGCCATTCCCAGAAGCCAATGCTGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS GCA 72 bp | ATGGCTTCAGCATTGGCTTCTGGGAATGGCTGCTGCTaGTGCCGCTGCTGCTGCTGTTGCTGCAGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: MASALASGNGCC*CRCCCCCCSWP Trigger: AGGCCAGCTGCAGCAACAGCAGCAGCAGCGGCAGCAGCAGCAGCCATTCCCAGAAGCCAATGCTGAAGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS GCA 72 bp | CTGATGGCTTCAGCATTGGCTTCTGGGAATGGCTGCTaGTGCTGCCGCTGCTGCTGCTGTTGCTGCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LMASALASGNGC*CCRCCCCCCSW Trigger: CCAGCTGCAGCAACAGCAGCAGCAGCGGCAGCAGCAGCAGCCATTCCCAGAAGCCAATGCTGAAGCCATCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS CCA 72 bp | TCCGGGAAGAACAGGAGCATATCCTCCAGCCCTGGGTaGTGCAGAGAAGCTGTCTCTCCAGGCCCAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SGKNRSISSSPG*CREAVSPGPAS Trigger: AGAGGCTGGGCCTGGAGAGACAGCTTCTCTGCACCACCCAGGGCTGGAGGATATGCTCCTGTTCTTCCCGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191010.2 |
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| CDS CCA 72 bp | AGTCTCCGGGAAGAACAGGAGCATATCCTCCAGCCCTaGGTGGTGCAGAGAAGCTGTCTCTCCAGGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLREEQEHILQP*VVQRSCLSRPS Trigger: GCTGGGCCTGGAGAGACAGCTTCTCTGCACCACCCAGGGCTGGAGGATATGCTCCTGTTCTTCCCGGAGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191010.2 |
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| CDS GCA 72 bp | AAGCTGATGGCTTCAGCATTGGCTTCTGGGAATGGCTaGTGCTGCTGCCGCTGCTGCTGCTGTTGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLMASALASGNG*CCCRCCCCCCS Trigger: GCTGCAGCAACAGCAGCAGCAGCGGCAGCAGCAGCAGCCATTCCCAGAAGCCAATGCTGAAGCCATCAGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS CCA 72 bp | AGGAAGCCGCGGCTAGAGGCGTGGACCAGTAGACAGTaGGTCAGGATCCCTATGTCGTCCTTGTACTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RKPRLEAWTSRQ*VRIPMSSLYFP Trigger: GGGGAAGTACAAGGACGACATAGGGATCCTGACCCACTGTCTACTGGTCCACGCCTCTAGCCGCGGCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 72 bp | CACAGCGATTTGTCTAGGAAGCCGCGGCTAGAGGCGTaGACCAGTAGACAGTGGGTCAGGATCCCTATGTCG | + |
|
Preference number: 6 (lower is better) Translates to: HSDLSRKPRLEA*TSRQWVRIPMS Trigger: CGACATAGGGATCCTGACCCACTGTCTACTGGTCCACGCCTCTAGCCGCGGCTTCCTAGACAAATCGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 72 bp | GAGAAAGCTGATGGCTTCAGCATTGGCTTCTGGGAATaGCTGCTGCTGCTGCCGCTGCTGCTGCTGTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EKADGFSIGFWE*LLLLPLLLLLL Trigger: CAGCAACAGCAGCAGCAGCGGCAGCAGCAGCAGCCATTCCCAGAAGCCAATGCTGAAGCCATCAGCTTTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS CCA 72 bp | GGAGTTGAGAAAGCTGATGGCTTCAGCATTGGCTTCTaGGAATGGCTGCTGCTGCTGCCGCTGCTGCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVEKADGFSIGF*EWLLLLPLLLL Trigger: CAGCAGCAGCAGCGGCAGCAGCAGCAGCCATTCCCAGAAGCCAATGCTGAAGCCATCAGCTTTCTCAACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128445.8 |
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| CDS CCA 72 bp | TCAGTTCTCCCTGAGGTTCCCCTGTGTCTGAGAGGATaGCCAGAGTCTCCGGGAAGAACAGGAGCATATCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVLPEVPLCLRG*PESPGRTGAYP Trigger: AGGATATGCTCCTGTTCTTCCCGGAGACTCTGGCCATCCTCTCAGACACAGGGGAACCTCAGGGAGAACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 72 bp | ATCTTGGTGATGATACAACATCCTGGAGAGCCCACCTaGACTCTCTTAGCCAGGTGCCCATCAGGGAGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ILVMIQHPGEPT*TLLARCPSGSK Trigger: CTTGCTCCCTGATGGGCACCTGGCTAAGAGAGTCCAGGTGGGCTCTCCAGGATGTTGTATCATCACCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS CCA 72 bp | TCTTATGAGGGGCATCTTGGTGATGATACAACATCCTaGAGAGCCCACCTGGACTCTCTTAGCCAGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SYEGHLGDDTTS*RAHLDSLSQVP Trigger: GGGCACCTGGCTAAGAGAGTCCAGGTGGGCTCTCCAGGATGTTGTATCATCACCAAGATGCCCCTCATAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS CAA 90 bp | GTGGGCGGAGACTCGATCACATCCTCCTCTCTTATGAGGGGCATCTaGGTGATGATACAACATCCTGGAGAGCCCACCTGGACTCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VGGDSITSSSLMRGI*VMIQHPGEPTWTLL Trigger: TAAGAGAGTCCAGGTGGGCTCTCCAGGATGTTGTATCATCACCAAGATGCCCCTCATAAGAGAGGAGGATGTGATCGAGTCTCCGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS GCA 72 bp | CTGCCAGGCCATCACTCTCAGCAGCACCACATTGGCTaGACTGGAGACAAAGCCCTTGAATGTTTTATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LPGHHSQQHHIG*TGDKALECFIG Trigger: CCCTATAAAACATTCAAGGGCTTTGTCTCCAGTGCAGCCAATGTGGTGCTGCTGAGAGTGATGGCCTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | ACCAGTAGACAGTGGGTCAGGATCCCTATGTCGTCCTaGTACTTCCCCCTCTGCACCTCAATGGTCAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TSRQWVRIPMSS*YFPLCTSMVSS Trigger: AGAACTGACCATTGAGGTGCAGAGGGGGAAGTACAAGGACGACATAGGGATCCTGACCCACTGTCTACTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | GCAGGAGAAGGGGATGCCCTCTTCAGAGTGTATGGTTaGCTCCACGATGAACATTTTAGCCTGCTGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AGEGDALFRVYG*LHDEHFSLLVA Trigger: GGCAACCAGCAGGCTAAAATGTTCATCGTGGAGCAAACCATACACTCTGAAGAGGGCATCCCCTTCTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | GACTCGATCACATCCTCCTCTCTTATGAGGGGCATCTaGGTGATGATACAACATCCTGGAGAGCCCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: DSITSSSLMRGI*VMIQHPGEPTW Trigger: CCAGGTGGGCTCTCCAGGATGTTGTATCATCACCAAGATGCCCCTCATAAGAGAGGAGGATGTGATCGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS CAA 90 bp | GTAGTACTGGCAGGAGAAGGGGATGCCCTCTTCAGAGTGTATGGTTaGCTCCACGATGAACATTTTAGCCTGCTGGTTGCCCACTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VVLAGEGDALFRVYG*LHDEHFSLLVAHLD Trigger: ATCCAAGTGGGCAACCAGCAGGCTAAAATGTTCATCGTGGAGCAAACCATACACTCTGAAGAGGGCATCCCCTTCTCCTGCCAGTACTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | AAAACAGAGACTCCGGTCTTCGTTTCCTCACCCTCCTaGACACTTCTGGTCACAACAAACTGGCCATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KTETPVFVSSPS*TLLVTTNWPSC Trigger: GCAGGATGGCCAGTTTGTTGTGACCAGAAGTGTCAAGGAGGGTGAGGAAACGAAGACCGGAGTCTCTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | CTCCACGATGAACATTTTAGCCTGCTGGTTGCCCACTaGGATTGTCTGGAAACCCAGGGATTTGTAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LHDEHFSLLVAH*DCLETQGFVGA Trigger: TGCACCTACAAATCCCTGGGTTTCCAGACAATCCAAGTGGGCAACCAGCAGGCTAAAATGTTCATCGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CAA 90 bp | TATGGTTTGCTCCACGATGAACATTTTAGCCTGCTGGTTGCCCACTaGGATTGTCTGGAAACCCAGGGATTTGTAGGTGCAATGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: YGLLHDEHFSLLVAH*DCLETQGFVGAMAE Trigger: CTCTGCCATTGCACCTACAAATCCCTGGGTTTCCAGACAATCCAAGTGGGCAACCAGCAGGCTAAAATGTTCATCGTGGAGCAAACCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS TCA 72 bp | CTCTCCATGGGAAGGACAGGGAACTTGATGAACTCCTaGCTGTGCTGTTCCATCAGCTCCAGATTGTTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSMGRTGNLMNS*LCCSISSRLLF Trigger: AAACAACAATCTGGAGCTGATGGAACAGCACAGTCAGGAGTTCATCAAGTTCCCTGTCCTTCCCATGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CCA 72 bp | TGTATGGTTTGCTCCACGATGAACATTTTAGCCTGCTaGTTGCCCACTTGGATTGTCTGGAAACCCAGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CMVCSTMNILAC*LPTWIVWKPRD Trigger: ATCCCTGGGTTTCCAGACAATCCAAGTGGGCAACCAGCAGGCTAAAATGTTCATCGTGGAGCAAACCATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | ATGGTTTGCTCCACGATGAACATTTTAGCCTGCTGGTaGCCCACTTGGATTGTCTGGAAACCCAGGGATTTG | + |
|
Preference number: 6 (lower is better) Translates to: MVCSTMNILACW*PTWIVWKPRDL Trigger: CAAATCCCTGGGTTTCCAGACAATCCAAGTGGGCAACCAGCAGGCTAAAATGTTCATCGTGGAGCAAACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000097697.8 ENSMUST00000128445.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | ACTTTGGCTCGGACTTTGTCGACATCATCGTCATCATaGTCGTCAACATCATCTTCGTCATCGTTGTCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: TLARTLSTSSSS*SSTSSSSSLSS Trigger: CGACGACAACGATGACGAAGATGATGTTGACGACAATGATGACGATGATGTCGACAAAGTCCGAGCCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | TTGTCGACACTGAGGTTGTCGACTTTGGCTCGGACTTaGTCGACATCATCGTCATCATTGTCGTCAACATCA | + |
|
Preference number: 6 (lower is better) Translates to: LSTLRLSTLART*STSSSSLSSTS Trigger: TGATGTTGACGACAATGATGACGATGATGTCGACAAAGTCCGAGCCAAAGTCGACAACCTCAGTGTCGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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| CDS CAA 72 bp | TTGTTGTTGTCATTGTCGACATCAACGTTGTCACTGTaGACAACATCGTTGTCATCATTGTCGACACTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLSLSTSTLSL*TTSLSSLSTLR Trigger: CCTCAGTGTCGACAATGATGACAACGATGTTGTCAACAGTGACAACGTTGATGTCGACAATGACAACAACAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097697.8 ENSMUST00000191010.2 |
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