Pregenerated sensors for CASTOR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015944Ensembl transcript IDs: ENSMUST00000016088.9
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGAGCAGCAGCGGCGGCTGCCTCTCTCTGCTTCCTGACTGTGGATaGCACGTGACCAGCGGCCACGTGACCAGCCGTCTCCCGCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: RSSSGGCLSLLPDCG*HVTSGHVTSRLPLL Trigger: CAGGAGCGGGAGACGGCTGGTCACGTGGCCGCTGGTCACGTGGCATCCACAGTCAGGAAGCAGAGAGAGGCAGCCGCCGCTGCTGCTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR TCA 90 bp | CACAGGAGGTGCCAGCTTCCTTTGGTGTTTGCTGCGGGCTGTAGGTaGGGCCTTGGGCTGGTCCCAAGTGTCCTGGGCCTCGGAGACCGC | + |
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Preference number: 1 (lower is better) Translates to: HRRCQLPLVFAAGCR*GLGLVPSVLGLGDR Trigger: GCGGTCTCCGAGGCCCAGGACACTTGGGACCAGCCCAAGGCCTCACCTACAGCCCGCAGCAAACACCAAAGGAAGCTGGCACCTCCTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | CTGGGGAGGTGGGACATGGCCCAAGGCACCCTAGGCCTGGGCAGGTaGGGATGCCCACCGCTGAAAGAAGCCGAGTCTTTGCTTGCCCAT | + |
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Preference number: 1 (lower is better) Translates to: LGRWDMAQGTLGLGR*GCPPLKEAESLLAH Trigger: ATGGGCAAGCAAAGACTCGGCTTCTTTCAGCGGTGGGCATCCCCACCTGCCCAGGCCTAGGGTGCCTTGGGCCATGTCCCACCTCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR GCA 90 bp | AGGTGGGACATGGCCCAAGGCACCCTAGGCCTGGGCAGGTGGGGATaGCCACCGCTGAAAGAAGCCGAGTCTTTGCTTGCCCATGATGGG | + |
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Preference number: 1 (lower is better) Translates to: RWDMAQGTLGLGRWG*PPLKEAESLLAHDG Trigger: CCCATCATGGGCAAGCAAAGACTCGGCTTCTTTCAGCGGTGGGCATCCCCACCTGCCCAGGCCTAGGGTGCCTTGGGCCATGTCCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR GCA 90 bp | GGTGGACAGAGGAGGACACCCGTCCCCCACCCCCTTCACCCAAGCTaGAGGACTGATGAAGTACCACTGTTGCTGGTGACCTGGGCACGA | + |
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Preference number: 1 (lower is better) Translates to: GGQRRTPVPHPLHPS*RTDEVPLLLVTWAR Trigger: TCGTGCCCAGGTCACCAGCAACAGTGGTACTTCATCAGTCCTGCAGCTTGGGTGAAGGGGGTGGGGGACGGGTGTCCTCCTCTGTCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | AGCTTCCTTTGGTGTTTGCTGCGGGCTGTAGGTGAGGCCTTGGGCTaGTCCCAAGTGTCCTGGGCCTCGGAGACCGCTTTCTGGGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: SFLWCLLRAVGEALG*SQVSWASETAFWGG Trigger: TCCACCCCAGAAAGCGGTCTCCGAGGCCCAGGACACTTGGGACCAGCCCAAGGCCTCACCTACAGCCCGCAGCAAACACCAAAGGAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | CCACAGGTGGGCCTACGCCAGTTCAGGCTGCCTGCATGGATTCCCTaGGCTGCTGAGGGGCAGAGTCTTTCTTGGGGATGTAGCGGATGG | + |
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Preference number: 1 (lower is better) Translates to: PQVGLRQFRLPAWIP*AAEGQSLSWGCSGW Trigger: CCATCCGCTACATCCCCAAGAAAGACTCTGCCCCTCAGCAGCCCAGGGAATCCATGCAGGCAGCCTGAACTGGCGTAGGCCCACCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | CACCCAAGCTGCAGGACTGATGAAGTACCACTGTTGCTGGTGACCTaGGCACGACATGCCAGGAGAGGGTCAGCTGGGGCTGTGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: HPSCRTDEVPLLLVT*ARHARRGSAGAVGR Trigger: CCTGCCCACAGCCCCAGCTGACCCTCTCCTGGCATGTCGTGCCCAGGTCACCAGCAACAGTGGTACTTCATCAGTCCTGCAGCTTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR TCA 90 bp | CCCTTCACCCAAGCTGCAGGACTGATGAAGTACCACTGTTGCTGGTaGCCTGGGCACGACATGCCAGGAGAGGGTCAGCTGGGGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: PFTQAAGLMKYHCCW*PGHDMPGEGQLGLW Trigger: CCACAGCCCCAGCTGACCCTCTCCTGGCATGTCGTGCCCAGGTCACCAGCAACAGTGGTACTTCATCAGTCCTGCAGCTTGGGTGAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | GGGAGAGCGAACAAAGGACAGATAGAAGCTGGCGCTCTAGGCTGGTaGGAGAGGGGGTGTCCTGGGATCCCCTCCAGGGACAAGTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: GRANKGQIEAGALGW*ERGCPGIPSRDKCS Trigger: AGAGCACTTGTCCCTGGAGGGGATCCCAGGACACCCCCTCTCCCACCAGCCTAGAGCGCCAGCTTCTATCTGTCCTTTGTTCGCTCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | CAAGGACCCACTGCAGCTGAACAGCAGTGCGGTCCCTTAAAAGGTTaGCCGGCAGAAGCCAGGCCCAGCCCTTTCTGGACACACAACCGT | + |
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Preference number: 1 (lower is better) Translates to: QGPTAAEQQCGPLKG*PAEARPSPFWTHNR Trigger: ACGGTTGTGTGTCCAGAAAGGGCTGGGCCTGGCTTCTGCCGGCCAACCTTTTAAGGGACCGCACTGCTGTTCAGCTGCAGTGGGTCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR GCA 90 bp | ATCATTGGGGACCTCACTAGTCTAAGCAGGTTGCTCCAGCAACACTaGCCAATGGGCAGCAGACAGAACCAGGTCCCCGGGTCCGTCCCA | + |
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Preference number: 1 (lower is better) Translates to: IIGDLTSLSRLLQQH*PMGSRQNQVPGSVP Trigger: TGGGACGGACCCGGGGACCTGGTTCTGTCTGCTGCCCATTGGGCAGTGTTGCTGGAGCAACCTGCTTAGACTAGTGAGGTCCCCAATGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | GGTCCCTTAAAAGGTTGGCCGGCAGAAGCCAGGCCCAGCCCTTTCTaGACACACAACCGTGGGAGTATGTGTGGTGGTCTGGGTCCTTAT | + |
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Preference number: 1 (lower is better) Translates to: GPLKGWPAEARPSPF*THNRGSMCGGLGPY Trigger: ATAAGGACCCAGACCACCACACATACTCCCACGGTTGTGTGTCCAGAAAGGGCTGGGCCTGGCTTCTGCCGGCCAACCTTTTAAGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR GCA 90 bp | CAATTGTTTGAAGAGTCCCACAGGTGGGCCTACGCCAGTTCAGGCTaGCTGCATGGATTCCCTGGGCTGCTGAGGGGCAGAGTCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: QLFEESHRWAYASSG*LHGFPGLLRGRVFL Trigger: AAGAAAGACTCTGCCCCTCAGCAGCCCAGGGAATCCATGCAGGCAGCCTGAACTGGCGTAGGCCCACCTGTGGGACTCTTCAAACAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | CTGCCTGCATGGATTCCCTGGGCTGCTGAGGGGCAGAGTCTTTCTTaGGGATGTAGCGGATGGAGAAAGGAGCCAATCCCATCACAGCAA | + |
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Preference number: 1 (lower is better) Translates to: LPAWIPWAAEGQSLS*GCSGWRKEPIPSQQ Trigger: TTGCTGTGATGGGATTGGCTCCTTTCTCCATCCGCTACATCCCCAAGAAAGACTCTGCCCCTCAGCAGCCCAGGGAATCCATGCAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | TTGCCCAGTCTAGAGCTTTGTGGACCCTTTCCCAAGGTGAGTTCCTaGGAAGCAAGGGGCACCTCTTGTCCCCAACCTCTCTCCGTGCAA | + |
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Preference number: 1 (lower is better) Translates to: LPSLELCGPFPKVSS*EARGTSCPQPLSVQ Trigger: TTGCACGGAGAGAGGTTGGGGACAAGAGGTGCCCCTTGCTTCCCAGGAACTCACCTTGGGAAAGGGTCCACAAAGCTCTAGACTGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR TCA 90 bp | AAATGTGGCCGGGAAGAGCTGTTGGCAGGTGGCTCAGACCTTCTTTaGAGATCGTGTACCAGACAATTGGGTGGGGTGTGGGCTGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: KCGREELLAGGSDLL*RSCTRQLGGVWAAC Trigger: ACAGGCAGCCCACACCCCACCCAATTGTCTGGTACACGATCTTCAAAGAAGGTCTGAGCCACCTGCCAACAGCTCTTCCCGGCCACATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | AGGTGGCTCAGACCTTCTTTGAAGATCGTGTACCAGACAATTGGGTaGGGTGTGGGCTGCCTGTGCTTAAGGGCCAGCTCCTTTACACCC | + |
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Preference number: 1 (lower is better) Translates to: RWLRPSLKIVYQTIG*GVGCLCLRASSFTP Trigger: GGGTGTAAAGGAGCTGGCCCTTAAGCACAGGCAGCCCACACCCCACCCAATTGTCTGGTACACGATCTTCAAAGAAGGTCTGAGCCACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | TGGCAGGTGGCTCAGACCTTCTTTGAAGATCGTGTACCAGACAATTaGGTGGGGTGTGGGCTGCCTGTGCTTAAGGGCCAGCTCCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: WQVAQTFFEDRVPDN*VGCGLPVLKGQLLY Trigger: GTAAAGGAGCTGGCCCTTAAGCACAGGCAGCCCACACCCCACCCAATTGTCTGGTACACGATCTTCAAAGAAGGTCTGAGCCACCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | GGCTCAGCCCATGGAAACCTGAATTTTGCCCAGTCTAGAGCTTTGTaGACCCTTTCCCAAGGTGAGTTCCTGGGAAGCAAGGGGCACCTC | + |
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Preference number: 1 (lower is better) Translates to: GSAHGNLNFAQSRAL*TLSQGEFLGSKGHL Trigger: GAGGTGCCCCTTGCTTCCCAGGAACTCACCTTGGGAAAGGGTCCACAAAGCTCTAGACTGGGCAAAATTCAGGTTTCCATGGGCTGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR GCA 90 bp | AACGGAAATGATTTTGGCATACAGGAGGAGGGCCGGGAGGACTACTaGTGTACTTCCGTCTCCCCTATTGTTTGGAGGCTGACCCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: NGNDFGIQEEGREDY*CTSVSPIVWRLTLL Trigger: GAGCAGGGTCAGCCTCCAAACAATAGGGGAGACGGAAGTACAGCAGTAGTCCTCCCGGCCCTCCTCCTGTATGCCAAAATCATTTCCGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR TCA 90 bp | GGTGTGGGCTGCCTGTGCTTAAGGGCCAGCTCCTTTACACCCGCTTaGGTTTCTCTTCACTCTTACAGGTCTTTCCATCATTGGGGACCT | + |
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Preference number: 1 (lower is better) Translates to: GVGCLCLRASSFTPA*VSLHSYRSFHHWGP Trigger: AGGTCCCCAATGATGGAAAGACCTGTAAGAGTGAAGAGAAACTCAAGCGGGTGTAAAGGAGCTGGCCCTTAAGCACAGGCAGCCCACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | ACCTTCACAGCAGCTTCTGAGAGCAATGTAAGGCTGACTGGCTGTTaGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: TFTAASESNVRLTGC*PCWPHFPPGCEDGG Trigger: ACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACAGCCAGTCAGCCTTACATTGCTCTCAGAAGCTGCTGTGAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | CCTGGAGCCAGGGCCAGCATTCCTATCTGTTTAACTGTGAGGCAATaGGTTAGGCTAAGGGGCCAAACACTGCATGAAACAGCTCACAGC | + |
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Preference number: 1 (lower is better) Translates to: PGARASIPICLTVRQ*VRLRGQTLHETAHS Trigger: GCTGTGAGCTGTTTCATGCAGTGTTTGGCCCCTTAGCCTAACCCATTGCCTCACAGTTAAACAGATAGGAATGCTGGCCCTGGCTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | GGACTTTTAAAGGTCAGCCTGGGAAATGTGGCCGGGAAGAGCTGTTaGCAGGTGGCTCAGACCTTCTTTGAAGATCGTGTACCAGACAAT | + |
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Preference number: 1 (lower is better) Translates to: GLLKVSLGNVAGKSC*QVAQTFFEDRVPDN Trigger: ATTGTCTGGTACACGATCTTCAAAGAAGGTCTGAGCCACCTGCCAACAGCTCTTCCCGGCCACATTTCCCAGGCTGACCTTTAAAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR TCA 90 bp | CCCCGCTGTGATGGACTGGATCTCATCAAACCCAAGAGTCAAAATTaGCACTTCCTCCCTTTGGCTCCTCTCTTCAGTTGCCTTAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: PRCDGLDLIKPKSQN*HFLPLAPLFSCLSG Trigger: TCCACTAAGGCAACTGAAGAGAGGAGCCAAAGGGAGGAAGTGTCAATTTTGACTCTTGGGTTTGATGAGATCCAGTCCATCACAGCGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR GCA 90 bp | AGACAACGAAGAAGAAACCCCGCAGGGGTAATGTCTCTCTACAAATaGTTGAAGATAGCTGCCTCCCAGGTTATCACCGTGACCACAGAT | + |
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Preference number: 1 (lower is better) Translates to: RQRRRNPAGVMSLYK*LKIAASQVITVTTD Trigger: ATCTGTGGTCACGGTGATAACCTGGGAGGCAGCTATCTTCAAGCATTTGTAGAGAGACATTACCCCTGCGGGGTTTCTTCTTCGTTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CCA 90 bp | TGGCTTCTACATGATTCTAGAAGAGTTCCTCTGGGTGTGTTTCTGTaGCCCAGAGAGGAGGGAAACACAGTTTGTACAAGACTGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: WLLHDSRRVPLGVFL*PREEGNTVCTRLCR Trigger: CCTGCACAGTCTTGTACAAACTGTGTTTCCCTCCTCTCTGGGCCACAGAAACACACCCAGAGGAACTCTTCTAGAATCATGTAGAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR GCA 90 bp | AAACCCCGCAGGGGTAATGTCTCTCTACAAATGCTTGAAGATAGCTaGCTCCCAGGTTATCACCGTGACCACAGATTGCTGTGTGTATTT | + |
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Preference number: 1 (lower is better) Translates to: KPRRGNVSLQMLEDS*LPGYHRDHRLLCVF Trigger: AAATACACACAGCAATCTGTGGTCACGGTGATAACCTGGGAGGCAGCTATCTTCAAGCATTTGTAGAGAGACATTACCCCTGCGGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCGGCGCTCTAGGCTGGTaGGAGAGGGGGTGTCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GLRPQASLGVFSNRPAPAGALGW*ERGCPG Trigger: CCCAGGACACCCCCTCTCCCACCAGCCTAGAGCGCC...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CAA 90 bp | GGTGCCAGCTTCCTTTGGTGTTTGCTGCGGGCTGTAGGTGAGGCCTaGGGCTGGTCCCAAGTGTCCTGGGCCTCGGAGACCGCTTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: GASFLWCLLRAVGEA*GWSQVSWASETAFW Trigger: CCAGAAAGCGGTCTCCGAGGCCCAGGACACTTGGGACCAGCCCAAGGCCTCACCTACAGCCCGCAGCAAACACCAAAGGAAGCTGGCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCAGAGGCCCTGGCCAGTaGCCCAGAGGTGCTTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GLRPQASLGVFSNRPAPARGPGQ*PRGAWG Trigger: TCCCCAAGCACCTCTGGGCCACTGGCCAGGGCCTCT...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGGTCTCCCCTCCAGGCTaGCCTCAGGACCCCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: PSPVESSSEERLEVKLGSVSPPG*PQDPRA Trigger: AGCCCTGGGGTCCTGAGGCCAGCCTGGAGGGGAGAC...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCGCGGCTGCCTCTCTCTaGTTCCTGACTGTGGATGCC | + |
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Preference number: 2 (lower is better) Translates to: GLRPQASLGVFSNRPAPAAAASL*FLTVDA Trigger: GGCATCCACAGTCAGGAAGCAGAGAGAGGCAGCCGC...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCCAGGGACAAGTGCTCTaGGGGGAAGTTTGGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GLRPQASLGVFSNRPAPAQGQVL*GEVWPR Trigger: CCTGGGCCAAACTTCCCCCCAGAGCACTTGTCCCTG...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGGCTGGCGCTCTAGGCTaGTGGGAGAGGGGGTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQAGALG*WERGCP Trigger: AGGACACCCCCTCTCCCACCAGCCTAGAGCGCCAGC...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCAAGGTGGTGGAACACTaGCATGCCCTGCAGGGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GLRPQASLGVFSNRPAPAKVVEH*HALQGV Trigger: CACCCCCTGCAGGGCATGCCAGTGTTCCACCACCTT...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CAA 90 bp | GCTCCTCTCTTCAGTTGCCTTAGTGGAGGCAAGGAAGAGCCTGCTTaGTCCCCACATCCAATCCAGAGGCCCTGGCCAGTGGCCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: APLFSCLSGGKEEPA*SPHPIQRPWPVAQR Trigger: CCTCTGGGCCACTGGCCAGGGCCTCTGGATTGGATGTGGGGACAAAGCAGGCTCTTCCTTGCCTCCACTAAGGCAACTGAAGAGAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | AGGATCTGGGAGTGGCTCTGTGGAGTACTTGCCTCTCACGCAGGAGGCCCTGCCGACCGCTTTCTGGGGTaGAACTTGGGGGAGGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RIWEWLCGVLASHAGGPADRFLG*NLGEED Trigger: ATCTTCCTCCCCCAAGTTCCACCCCAGAAAGCGGTC...GGCAGGGCCTCCTGCGTGAGAGGCAAGTACTCCACAGAGCCACTCCCAGATCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGGGAGAGGGGGTGTCCTaGGATCCCCTCCAGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQGEGVS*DPLQGQ Trigger: TTGTCCCTGGAGGGGATCCCAGGACACCCCCTCTCC...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | AGGATCTGGGAGTGGCTCTGTGGAGTACTTGCCTCTCACGCAGGAGGCCCTGCCCTGCAGGGGGTGCTATaGGGTCCTGGTGTCTTGTAT | + |
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Preference number: 2 (lower is better) Translates to: RIWEWLCGVLASHAGGPALQGVL*GPGVLY Trigger: ATACAAGACACCAGGACCCCATAGCACCCCCTGCAG...GGCAGGGCCTCCTGCGTGAGAGGCAAGTACTCCACAGAGCCACTCCCAGATCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CAA 90 bp | GGGCACCCATACCCACTCCCCTGCCTCGGGATAACGGAAATGATTTaGGCATACAGGAGGAGGGCCGGGAGGACTACTGCTGTACTTCCG | + |
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Preference number: 2 (lower is better) Translates to: GHPYPLPCLGITEMI*AYRRRAGRTTAVLP Trigger: CGGAAGTACAGCAGTAGTCCTCCCGGCCCTCCTCCTGTATGCCAAAATCATTTCCGTTATCCCGAGGCAGGGGAGTGGGTATGGGTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGCTAGGCTGGTCTAAGTaGCAGCTGGGGAGGTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: PSPVESSSEERLEVKLGSLGWSK*QLGRWD Trigger: GTCCCACCTCCCCAGCTGTCACTTAGACCAGCCTAG...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGGCCGAGAGACTCTGCTaGGAGGATCTGGGAGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: PSPVESSSEERLEVKLGSAERLC*EDLGVA Trigger: AGCCACTCCCAGATCCTCGCAGCAGAGTCTCTCGGC...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACCTGTATGCAAAGACAACGAAGAAGAAACCCCGCAGGGGTAATGTCTCTCGGCCCAGGTGGGCTGTaGCAGGGAGGAGCCCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: ATCMQRQRRRNPAGVMSLGPGGL*QGGAQR Trigger: TCTCTGGGCTCCTCCCTGCCACAGCCCACCTGGGCC...GAGAGACATTACCCCTGCGGGGTTTCTTCTTCGTTGTCTTTGCATACAGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGGACACAGGCCCTGTGTaGTCAGCAGGTGGGGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQDTGPV*SAGGGL Trigger: TAGACCCCCACCTGCTGACCACACAGGGCCTGTGTC...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGGGTCTAAGTGACAGCTaGGGAGGTGGGACATGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PSPVESSSEERLEVKLGSGLSDS*GGGTWP Trigger: GGGCCATGTCCCACCTCCCCAGCTGTCACTTAGACC...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGTCTGCCAGCTCACTGGCCATTATaGCCTGAGGGTGGCCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: CWPCWPHFPPGCEDGGLPAHWPL*PEGGLL Trigger: CAGCAGGCCACCCTCAGGTCATAATGGCCAGTGAGC...TGGCAGACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | GCCACCTGTATGCAAAGACAACGAAGAAGAAACCCCGCAGGGGTAATGTCTCTCGCTCAGGCCCAGGCCTaGAGGAGTCAGGAATCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: ATCMQRQRRRNPAGVMSLAQAQA*RSQESG Trigger: CCCTGATTCCTGACTCCTCCAGGCCTGGGCCTGAGC...GAGAGACATTACCCCTGCGGGGTTTCTTCTTCGTTGTCTTTGCATACAGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCCTAGAAGAGTTCCTCTaGGTGTGTTTCTGTGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GLRPQASLGVFSNRPAPALEEFL*VCFCGP Trigger: TGGGCCACAGAAACACACCCAGAGGAACTCTTCTAG...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACACCAGGAACCTGTTACCTGCAGATGGTGGGACAGGGTGAGTGTTGATGCTAAAGCCCCGCCCACTTaGCCATTTCCCATTCGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PHQEPVTCRWWDRVSVDAKAPPT*PFPIRD Trigger: GTCCCGAATGGGAAATGGCCAAGTGGGCGGGGCTTT...AGCATCAACACTCACCCTGTCCCACCATCTGCAGGTAACAGGTTCCTGGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CAA 90 bp | GGAGGGCCGGGAGGACTACTGCTGTACTTCCGTCTCCCCTATTGTTaGGAGGCTGACCCTGCTCTAACTCTTCCTGTGATACGGGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: GGPGGLLLYFRLPYC*EADPALTLPVIRVN Trigger: GTTTACCCGTATCACAGGAAGAGTTAGAGCAGGGTCAGCCTCCAAACAATAGGGGAGACGGAAGTACAGCAGTAGTCCTCCCGGCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGGAGGGAACCAGCCCCTaGACCTCTAAAACTAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: PSPVESSSEERLEVKLGSEGTSP*TSKTRA Trigger: TGCTCTAGTTTTAGAGGTTCAGGGGCTGGTTCCCTC...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACACCAGGAACCTGTTACCTGCAGATGGTGGGACAGGGTGAGTGTTGATGCTGGTGCCAGCTTCCTTTaGTGTTTGCTGCGGGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: PHQEPVTCRWWDRVSVDAGASFL*CLLRAV Trigger: TACAGCCCGCAGCAAACACCAAAGGAAGCTGGCACC...AGCATCAACACTCACCCTGTCCCACCATCTGCAGGTAACAGGTTCCTGGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGATCTGGGAGTGGCTCTGTGGAGTACTTGCCTCTCACGCAGGAGGCCCTGCCAGCACACTTATATGGTaGGAAGGGATGACTGGAAAG | + |
|
Preference number: 2 (lower is better) Translates to: RIWEWLCGVLASHAGGPASTLIW*EGMTGK Trigger: CTTTCCAGTCATCCCTTCCCACCATATAAGTGTGCT...GGCAGGGCCTCCTGCGTGAGAGGCAAGTACTCCACAGAGCCACTCCCAGATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGTCTGCCACTTGCGGTAGGTTGTTaGTTCTGTCTCCCCTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: CWPCWPHFPPGCEDGGLPLAVGC*FCLPSR Trigger: CCTGGAGGGGAGACAGAACCAACAACCTACCGCAAG...TGGCAGACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGTCTGCCATCTGCTGCGAGGATCTaGGAGTGGCTCTGTGGAGTA | + |
|
Preference number: 2 (lower is better) Translates to: CWPCWPHFPPGCEDGGLPSAARI*EWLCGV Trigger: TACTCCACAGAGCCACTCCCAGATCCTCGCAGCAGA...TGGCAGACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACACCAGGAACCTGTTACCTGCAGATGGTGGGACAGGGTGAGTGTTGATGCTGATAAGGGGGCTTTATaGGGGCAGGGCTGCATACCT | + |
|
Preference number: 2 (lower is better) Translates to: PHQEPVTCRWWDRVSVDADKGAL*GQGCIP Trigger: AGGTATGCAGCCCTGCCCCCATAAAGCCCCCTTATC...AGCATCAACACTCACCCTGTCCCACCATCTGCAGGTAACAGGTTCCTGGTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 90 bp | GGGTGTGGGCTGCCTGTGCTTAAGGGCCAGCTCCTTTACACCCGCTaGAGTTTCTCTTCACTCTTACAGGTCTTTCCATCATTGGGGACC | + |
|
Preference number: 2 (lower is better) Translates to: GCGLPVLKGQLLYTR*SFSSLLQVFPSLGT Trigger: GGTCCCCAATGATGGAAAGACCTGTAAGAGTGAAGAGAAACTCAAGCGGGTGTAAAGGAGCTGGCCCTTAAGCACAGGCAGCCCACACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 90 bp | CTAGGCTCAGCCCATGGAAACCTGAATTTTGCCCAGTCTAGAGCTTaGTGGACCCTTTCCCAAGGTGAGTTCCTGGGAAGCAAGGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LGSAHGNLNFAQSRA*WTLSQGEFLGSKGH Trigger: GTGCCCCTTGCTTCCCAGGAACTCACCTTGGGAAAGGGTCCACAAAGCTCTAGACTGGGCAAAATTCAGGTTTCCATGGGCTGAGCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGTCTGCCAGATGGTGGGACAGGGTaGGTGTTGATGCTTAGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: CWPCWPHFPPGCEDGGLPDGGTG*VLMLRS Trigger: ACTCCTAAGCATCAACACTCACCCTGTCCCACCATC...TGGCAGACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCTCCTTTACACCCGCTTaGGTTTCTCTTCACTCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: GLRPQASLGVFSNRPAPASFTPA*VSLHSY Trigger: GTAAGAGTGAAGAGAAACTCAAGCGGGTGTAAAGGA...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR GCA 90 bp | AGGATCTGGGAGTGGCTCTGTGGAGTACTTGCCTCTCACGCAGGAGGCCCTGCCATGTCTCTCTACAAATaGTTGAAGATAGCTGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RIWEWLCGVLASHAGGPAMSLYK*LKIAAS Trigger: GGAGGCAGCTATCTTCAAGCATTTGTAGAGAGACAT...GGCAGGGCCTCCTGCGTGAGAGGCAAGTACTCCACAGAGCCACTCCCAGATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGGCTCCTCTCTTCAGTTaGCTTAGTGGAGGCAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PSPVESSSEERLEVKLGSAPLFS*LSGGKE Trigger: TTCCTTGCCTCCACTAAGGCAACTGAAGAGAGGAGC...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | CCACACCAGGAACCTGTTACCTGCAGATGGTGGGACAGGGTGAGTGTTGATGCTCAGAGCTCTAGGCTGTaGAAATGGGGGTACAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: PHQEPVTCRWWDRVSVDAQSSRL*KWGYSS Trigger: GCTACTGTACCCCCATTTCCACAGCCTAGAGCTCTG...AGCATCAACACTCACCCTGTCCCACCATCTGCAGGTAACAGGTTCCTGGTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 90 bp | TGGACCCTTTCCCAAGGTGAGTTCCTGGGAAGCAAGGGGCACCTCTaGTCCCCAACCTCTCTCCGTGCAAATACTGTCTTGAGAACTCAA | + |
|
Preference number: 2 (lower is better) Translates to: WTLSQGEFLGSKGHL*SPTSLRANTVLRTQ Trigger: TTGAGTTCTCAAGACAGTATTTGCACGGAGAGAGGTTGGGGACAAGAGGTGCCCCTTGCTTCCCAGGAACTCACCTTGGGAAAGGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCATTCTGAGGGAACCAGCCCCTGAACCTCTAAAACTAGAGCAGCAACCAAAAGGCTGGGGACTCTaGAAGGCAGGAGGAGGATGT | + |
|
Preference number: 2 (lower is better) Translates to: TSILREPAPEPLKLEQQPKGWGL*KAGGGC Trigger: ACATCCTCCTCCTGCCTTCCAGAGTCCCCAGCCTTT...TGGTTGCTGCTCTAGTTTTAGAGGTTCAGGGGCTGGTTCCCTCAGAATGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACCTGTATGCAAAGACAACGAAGAAGAAACCCCGCAGGGGTAATGTCTCTCTTCTGGGGTGGAACTTaGGGGAGGAAGATGGGCACA | + |
|
Preference number: 2 (lower is better) Translates to: ATCMQRQRRRNPAGVMSLFWGGT*GRKMGT Trigger: TGTGCCCATCTTCCTCCCCCAAGTTCCACCCCAGAA...GAGAGACATTACCCCTGCGGGGTTTCTTCTTCGTTGTCTTTGCATACAGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGCAGAGGCGGGTAGAGTCCTATCAATTCAAGGCCAGCCTGGTCTACAAAGCCAGCACACTTATATaGTGGGAAGGGATGACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GRQRRVESYQFKASLVYKASTLI*WEGMTG Trigger: TCCAGTCATCCCTTCCCACCATATAAGTGTGCTGGC...TTTGTAGACCAGGCTGGCCTTGAATTGATAGGACTCTACCCGCCTCTGCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | TGTTGGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGTCTGCCAGTTACCTGCAGATGGTaGGACAGGGTGAGTGTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: CWPCWPHFPPGCEDGGLPVTCRW*DRVSVD Trigger: ATCAACACTCACCCTGTCCCACCATCTGCAGGTAAC...TGGCAGACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR GCA 90 bp | CCTTTCTGGACACACAACCGTGGGAGTATGTGTGGTGGTCTGGGTCCTTATGGAGTGTCTCACAGGAGGTaGCAGCTTCCTTTGGTGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PFWTHNRGSMCGGLGPYGVSHRR*QLPLVF Trigger: AAACACCAAAGGAAGCTGGCACCTCCTGTGAGACAC...TCCATAAGGACCCAGACCACCACACATACTCCCACGGTTGTGTGTCCAGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR GCA 90 bp | CCTTTCTGGACACACAACCGTGGGAGTATGTGTGGTGGTCTGGGTCCTTATGGAACCGTGACCACAGATTaGTGTGTGTATTTCGGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PFWTHNRGSMCGGLGPYGTVTTD*CVYFGQ Trigger: CTGCCCGAAATACACACAGCAATCTGTGGTCACGGT...TCCATAAGGACCCAGACCACCACACATACTCCCACGGTTGTGTGTCCAGAAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGTCTAGGCTGTGGAAATaGGGGTACAGTAGCTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: PSPVESSSEERLEVKLGSSRLWK*GYSSYE Trigger: TTCATAGCTACTGTACCCCCATTTCCACAGCCTAGA...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR GCA 90 bp | CATCCCCCAGAACTGAAGACACCACACCATGCTGATCTACCCACAGAACACAGACTGTACCCCCAATCTTaGTCCACCAACTCCCTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: HPPELKTPHHADLPTEHRLYPQS*STNSLR Trigger: TCTTAGGGAGTTGGTGGAGCAAGATTGGGGGTACAG...TCTGTGTTCTGTGGGTAGATCAGCATGGTGTGGTGTCTTCAGTTCTGGGGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR-3UTR CCA 90 bp | CCTTTCTGGACACACAACCGTGGGAGTATGTGTGGTGGTCTGGGTCCTTATGGAGTCTATAGCTTTCTATaGAGAAGGGACTTGGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: PFWTHNRGSMCGGLGPYGVYSFL*RRDLGG Trigger: CCCTCCCAAGTCCCTTCTCCATAGAAAGCTATAGAC...TCCATAAGGACCCAGACCACCACACATACTCCCACGGTTGTGTGTCCAGAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 90 bp | CAACGAAGAAGAAACCCCGCAGGGGTAATGTCTCTCTACAAATGCTaGAAGATAGCTGCCTCCCAGGTTATCACCGTGACCACAGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: QRRRNPAGVMSLYKC*KIAASQVITVTTDC Trigger: GCAATCTGTGGTCACGGTGATAACCTGGGAGGCAGCTATCTTCAAGCATTTGTAGAGAGACATTACCCCTGCGGGGTTTCTTCTTCGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTCCTCTGGGTGTGTTTCTGTGGCCCAGAGAGGAGGGAAACACAGTTTGTACAAAACAGAGTCATTACTaGAAAGGCTGGGGACTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VPLGVFLWPREEGNTVCTKQSHY*KGWGLW Trigger: CCAGAGTCCCCAGCCTTTTCAGTAATGACTCTGTTT...TGTACAAACTGTGTTTCCCTCCTCTCTGGGCCACAGAAACACACCCAGAGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCCAACCTCTCTCCGTGCAAATACTGTCTTGAGAACTCAATTGTTTGAAGAGCACCAAGGCAAGTGCTaGTGCCACCTATGGCATCCC | + |
|
Preference number: 2 (lower is better) Translates to: SPTSLRANTVLRTQLFEEHQGKC*CHLWHP Trigger: GGGATGCCATAGGTGGCATCAGCACTTGCCTTGGTG...CTCTTCAAACAATTGAGTTCTCAAGACAGTATTTGCACGGAGAGAGGTTGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAACCTCTCTCCGTGCAAATACTGTCTTGAGAACTCAATTGTTTGAAGAGTCCAGGCTGACTGGCTGTTaGCCATGTTGGCCTCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: PTSLRANTVLRTQLFEESRLTGC*PCWPHF Trigger: GAAGTGAGGCCAACATGGCCAACAGCCAGTCAGCCT...GGACTCTTCAAACAATTGAGTTCTCAAGACAGTATTTGCACGGAGAGAGGTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCCAACCTCTCTCCGTGCAAATACTGTCTTGAGAACTCAATTGTTTGAAGAGAACCCAGGGGGTTCCTaGCTGCGGTTCCTAAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: SPTSLRANTVLRTQLFEENPGGS*LRFLKL Trigger: AAGTTTTAGGAACCGCAGTCAGGAACCCCCTGGGTT...CTCTTCAAACAATTGAGTTCTCAAGACAGTATTTGCACGGAGAGAGGTTGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTCCTCTGGGTGTGTTTCTGTGGCCCAGAGAGGAGGGAAACACAGTTTGTACATCCATAGGGAAATACTaGAAGAATAACCTTCGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: VPLGVFLWPREEGNTVCTSIGKY*KNNLRG Trigger: CCCACGAAGGTTATTCTTGCAGTATTTCCCTATGGA...TGTACAAACTGTGTTTCCCTCCTCTCTGGGCCACAGAAACACACCCAGAGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | GCGGAGCAGCAGCGGCGGCTGCCTCTCTCTGCTTCCTaGCTGTGGATGCCACGTGACCAGCGGCCACGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: AEQQRRLPLSAS*LWMPRDQRPRD Trigger: GTCACGTGGCCGCTGGTCACGTGGCATCCACAGTCAGGAAGCAGAGAGAGGCAGCCGCCGCTGCTGCTCCGC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | AGCGGCGGCTGCCTCTCTCTGCTTCCTGACTGTGGATaGCACGTGACCAGCGGCCACGTGACCAGCCGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SGGCLSLLPDCG*HVTSGHVTSRL Trigger: GAGACGGCTGGTCACGTGGCCGCTGGTCACGTGGCATCCACAGTCAGGAAGCAGAGAGAGGCAGCCGCCGCT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GAGGATGTGGGGGTGGCCCTAGCTCAGGCCCAGGCCTaGAGGAGTCAGGAATCAGGGGAGTGTCCCAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: EDVGVALAQAQA*RSQESGECPRG Trigger: GCCTCTGGGACACTCCCCTGATTCCTGACTCCTCCAGGCCTGGGCCTGAGCTAGGGCCACCCCCACATCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | ATGGCCCAAGGCACCCTAGGCCTGGGCAGGTGGGGATaGCCACCGCTGAAAGAAGCCGAGTCTTTGCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: MAQGTLGLGRWG*PPLKEAESLLA Trigger: GGCAAGCAAAGACTCGGCTTCTTTCAGCGGTGGGCATCCCCACCTGCCCAGGCCTAGGGTGCCTTGGGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | GAAGAGTCCCACAGGTGGGCCTACGCCAGTTCAGGCTaGCTGCATGGATTCCCTGGGCTGCTGAGGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EESHRWAYASSG*LHGFPGLLRGR Trigger: TCTGCCCCTCAGCAGCCCAGGGAATCCATGCAGGCAGCCTGAACTGGCGTAGGCCCACCTGTGGGACTCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | TGGTCCCAAGTGTCCTGGGCCTCGGAGACCGCTTTCTaGGGTGGAACTTGGGGGAGGAAGATGGGCACACCC | + |
|
Preference number: 3 (lower is better) Translates to: WSQVSWASETAF*GGTWGRKMGTP Trigger: GGGTGTGCCCATCTTCCTCCCCCAAGTTCCACCCCAGAAAGCGGTCTCCGAGGCCCAGGACACTTGGGACCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | TGGTGTTTGCTGCGGGCTGTAGGTGAGGCCTTGGGCTaGTCCCAAGTGTCCTGGGCCTCGGAGACCGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WCLLRAVGEALG*SQVSWASETAF Trigger: GAAAGCGGTCTCCGAGGCCCAGGACACTTGGGACCAGCCCAAGGCCTCACCTACAGCCCGCAGCAAACACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | TGGGACATGGCCCAAGGCACCCTAGGCCTGGGCAGGTaGGGATGCCCACCGCTGAAAGAAGCCGAGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WDMAQGTLGLGR*GCPPLKEAESL Trigger: CAAAGACTCGGCTTCTTTCAGCGGTGGGCATCCCCACCTGCCCAGGCCTAGGGTGCCTTGGGCCATGTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | TGCCAGCTTCCTTTGGTGTTTGCTGCGGGCTGTAGGTaGGGCCTTGGGCTGGTCCCAAGTGTCCTGGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CQLPLVFAAGCR*GLGLVPSVLGL Trigger: GAGGCCCAGGACACTTGGGACCAGCCCAAGGCCTCACCTACAGCCCGCAGCAAACACCAAAGGAAGCTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | CCACAGGTGGGCCTACGCCAGTTCAGGCTGCCTGCATaGATTCCCTGGGCTGCTGAGGGGCAGAGTCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PQVGLRQFRLPA*IPWAAEGQSLS Trigger: AGAAAGACTCTGCCCCTCAGCAGCCCAGGGAATCCATGCAGGCAGCCTGAACTGGCGTAGGCCCACCTGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | AGGAGGACACCCGTCCCCCACCCCCTTCACCCAAGCTaGAGGACTGATGAAGTACCACTGTTGCTGGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: RRTPVPHPLHPS*RTDEVPLLLVT Trigger: GGTCACCAGCAACAGTGGTACTTCATCAGTCCTGCAGCTTGGGTGAAGGGGGTGGGGGACGGGTGTCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | AACAAAGGACAGATAGAAGCTGGCGCTCTAGGCTGGTaGGAGAGGGGGTGTCCTGGGATCCCCTCCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: NKGQIEAGALGW*ERGCPGIPSRD Trigger: GTCCCTGGAGGGGATCCCAGGACACCCCCTCTCCCACCAGCCTAGAGCGCCAGCTTCTATCTGTCCTTTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GTGGTGGAACACTGGCATGCCCTGCAGGGGGTGCTATaGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VVEHWHALQGVL*GPGVLYQSSAP Trigger: GGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAGCACCCCCTGCAGGGCATGCCAGTGTTCCACCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGATCTGGGAGTGGCTCTGTGGAGTACTTGCCTCTCACGCAGGAGGCCCTGCCAGCTTCCTTTGGTGTTaGCTGCGGGCTGTAGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: RIWEWLCGVLASHAGGPASFLWC*LRAVGE Trigger: CTCACCTACAGCCCGCAGCAAACACCAAAGGAAGCT...GGCAGGGCCTCCTGCGTGAGAGGCAAGTACTCCACAGAGCCACTCCCAGATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGCAGGCTGGGACAGATGGGTTTACCAGACAAAGGTTTTGGGGTAACCCTATGAGGTGGGGGCCCTaGCCTGTGTCCTGCGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: GRQAGTDGFTRQRFWGNPMRWGP*PVSCAH Trigger: GTGTGCGCAGGACACAGGCAAGGGCCCCCACCTCAT...AGGGTTACCCCAAAACCTTTGTCTGGTAAACCCATCTGTCCCAGCCTGCCTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCTCTTGGAAAGCAGGTTaGCCCCAGGCTATGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLRPQASLGVFSNRPAPASWKAG*PQAMGL Trigger: CAGCCCCATAGCCTGGGGCAAACCTGCTTTCCAAGA...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | GGGCACACCCCCACCGAGCGGAAACAGAGTCATTACTaGAAAGGCTGGGGACTCTGGAAGGCAGGAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GHTPTERKQSHY*KGWGLWKAGGG Trigger: TCCTCCTCCTGCCTTCCAGAGTCCCCAGCCTTTTCAGTAATGACTCTGTTTCCGCTCGGTGGGGGTGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | TGCATCAGGACCCCGATCCCAGTGTCTCACAGGAGGTaGCAGCTTCCTTTGGTGTTTGCTGCGGGCTGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: CIRTPIPVSHRR*QLPLVFAAGCR Trigger: CCTACAGCCCGCAGCAAACACCAAAGGAAGCTGGCACCTCCTGTGAGACACTGGGATCGGGGTCCTGATGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | AAGCAGACTACACTGGCCCTCTCAGCCTGCCCCACTTaGGGTAGGTTGTTGGTTCTGTCTCCCCTCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KQTTLALSACPT*GRLLVLSPLQA Trigger: AGCCTGGAGGGGAGACAGAACCAACAACCTACCGCAAGTGGGGCAGGCTGAGAGGGCCAGTGTAGTCTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | AGCTTCCTCCAAGGACCCACTGCAGCTGAACAGCAGTaGGGTCCCTTAAAAGGTTGGCCGGCAGAAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SFLQGPTAAEQQ*GPLKGWPAEAR Trigger: CCTGGCTTCTGCCGGCCAACCTTTTAAGGGACCGCACTGCTGTTCAGCTGCAGTGGGTCCTTGGAGGAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | GACCTCACTAGTCTAAGCAGGTTGCTCCAGCAACACTaGCCAATGGGCAGCAGACAGAACCAGGTCCCCGGG | + |
|
Preference number: 3 (lower is better) Translates to: DLTSLSRLLQQH*PMGSRQNQVPG Trigger: CCCGGGGACCTGGTTCTGTCTGCTGCCCATTGGGCAGTGTTGCTGGAGCAACCTGCTTAGACTAGTGAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | AAAGGTTGGCCGGCAGAAGCCAGGCCCAGCCCTTTCTaGACACACAACCGTGGGAGTATGTGTGGTGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KGWPAEARPSPF*THNRGSMCGGL Trigger: CAGACCACCACACATACTCCCACGGTTGTGTGTCCAGAAAGGGCTGGGCCTGGCTTCTGCCGGCCAACCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | ACTGCAGCTGAACAGCAGTGCGGTCCCTTAAAAGGTTaGCCGGCAGAAGCCAGGCCCAGCCCTTTCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: TAAEQQCGPLKG*PAEARPSPFWT Trigger: TGTCCAGAAAGGGCTGGGCCTGGCTTCTGCCGGCCAACCTTTTAAGGGACCGCACTGCTGTTCAGCTGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | CAATCCAGAGGCCCTGGCCAGTGGCCCAGAGGTGCTTaGGGACTTTTAAAGGTCAGCCTGGGAAATGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSRGPGQWPRGA*GLLKVSLGNVA Trigger: GGCCACATTTCCCAGGCTGACCTTTAAAAGTCCCCAAGCACCTCTGGGCCACTGGCCAGGGCCTCTGGATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | TGCAGGACTGATGAAGTACCACTGTTGCTGGTGACCTaGGCACGACATGCCAGGAGAGGGTCAGCTGGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CRTDEVPLLLVT*ARHARRGSAGA Trigger: AGCCCCAGCTGACCCTCTCCTGGCATGTCGTGCCCAGGTCACCAGCAACAGTGGTACTTCATCAGTCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACACCAGGAACCTGTTACCTGCAGATGGTGGGACAGGGTGAGTGTTGATGCTGCTGTAGGTGAGGCCTaGGGCTGGTCCCAAGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PHQEPVTCRWWDRVSVDAAVGEA*GWSQVS Trigger: GGACACTTGGGACCAGCCCAAGGCCTCACCTACAGC...AGCATCAACACTCACCCTGTCCCACCATCTGCAGGTAACAGGTTCCTGGTGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCTGGGGGTCTAGAGTCTaGCCTTTCCTCCCCAGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLRPQASLGVFSNRPAPAWGSRV*PFLPSL Trigger: TAAGCTGGGGAGGAAAGGCAAGACTCTAGACCCCCA...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGTTTCTGGGGTGGAACTaGGGGGAGGAAGATGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQFLGWN*GEEDGH Trigger: GTGCCCATCTTCCTCCCCCAAGTTCCACCCCAGAAA...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | ACCCCACTGCTACTGTCTGAGGCTCACTGGCCATTATaGCCTGAGGGTGGCCTGCTGACCTCCATTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: TPLLLSEAHWPL*PEGGLLTSILR Trigger: CCTCAGAATGGAGGTCAGCAGGCCACCCTCAGGTCATAATGGCCAGTGAGCCTCAGACAGTAGCAGTGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | CTGTTGGCCATGTTGGCCTCACTTCCCTCCTGGATGTaGAGATGGAGGTCTGCCACCCTTCCAACCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LLAMLASLPSWM*RWRSATLPTLS Trigger: GCTGAGGGTTGGAAGGGTGGCAGACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | CAAGCTGCAGGACTGATGAAGTACCACTGTTGCTGGTaGCCTGGGCACGACATGCCAGGAGAGGGTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: QAAGLMKYHCCW*PGHDMPGEGQL Trigger: CAGCTGACCCTCTCCTGGCATGTCGTGCCCAGGTCACCAGCAACAGTGGTACTTCATCAGTCCTGCAGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | TCTACCAAGAGCCACAAATCACCACCACCAAACCGATaGCCGCAAGAGCCATGGCCTCAGGCCTCAAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: STKSHKSPPPNR*PQEPWPQASSL Trigger: GAGGCTTGAGGCCTGAGGCCATGGCTCTTGCGGGCATCGGTTTGGTGGTGGTGATTTGTGGCTCTTGGTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGCAGAGGCGGGTAGAGTCCTATCAATTCAAGGCCAGCCTGGTCTACAAATGGGGTCCTGGTGTCTaGTATCAGAGCTCTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRQRRVESYQFKASLVYKWGPGV*YQSSAP Trigger: GGGAGCAGAGCTCTGATACAAGACACCAGGACCCCA...TTTGTAGACCAGGCTGGCCTTGAATTGATAGGACTCTACCCGCCTCTGCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | GTAGCTATGAAGCAGACTACACTGGCCCTCTCAGCCTaGCCCACTTGCGGTAGGTTGTTGGTTCTGTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: VAMKQTTLALSA*PTCGRLLVLSP Trigger: GGGAGACAGAACCAACAACCTACCGCAAGTGGGGCAGGCTGAGAGGGCCAGTGTAGTCTGCTTCATAGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | TGGATTCCCTGGGCTGCTGAGGGGCAGAGTCTTTCTTaGGGATGTAGCGGATGGAGAAAGGAGCCAATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: WIPWAAEGQSLS*GCSGWRKEPIP Trigger: TGGGATTGGCTCCTTTCTCCATCCGCTACATCCCCAAGAAAGACTCTGCCCCTCAGCAGCCCAGGGAATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | CTAGAGCTTTGTGGACCCTTTCCCAAGGTGAGTTCCTaGGAAGCAAGGGGCACCTCTTGTCCCCAACCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LELCGPFPKVSS*EARGTSCPQPL Trigger: GAGAGGTTGGGGACAAGAGGTGCCCCTTGCTTCCCAGGAACTCACCTTGGGAAAGGGTCCACAAAGCTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTGAAGATAGCTGCCTCCCAGGTTATCACCGTGACCACAGATTGCTGTGTGGGCCCAGGGCCCCTCTaGGCAGTTGTAGAGGAAATC | + |
|
Preference number: 3 (lower is better) Translates to: CLKIAASQVITVTTDCCVGPGPL*AVVEEI Trigger: GATTTCCTCTACAACTGCCAAGAGGGGCCCTGGGCC...CACACAGCAATCTGTGGTCACGGTGATAACCTGGGAGGCAGCTATCTTCAAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | CGTCTCCCGCTCCTGCTGCTGTGCCTTTCCCCGCTGTaGTGGACTGGATCTCATCAAACCCAAGAGTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RLPLLLLCLSPL*WTGSHQTQESK Trigger: TTTTGACTCTTGGGTTTGATGAGATCCAGTCCATCACAGCGGGGAAAGGCACAGCAGCAGGAGCGGGAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | CATCCTGAAACATGGGACTGGACCACCCTGCACTACTaGCTCTCCCAGGTTCCCGTCTCTTCTACCAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HPETWDWTTLHY*LSQVPVSSTKS Trigger: GCTCTTGGTAGAAGAGACGGGAACCTGGGAGAGTCAGTAGTGCAGGGTGGTCCAGTCCCATGTTTCAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | TTGGCAGTTGTAGAGGAAATCGACACAGGCCCTGTGTaGTCAGCAGGTGGGGGTCTAGAGTCTTGCCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LAVVEEIDTGPV*SAGGGLESCLS Trigger: GGAAAGGCAAGACTCTAGACCCCCACCTGCTGACCACACAGGGCCTGTGTCGATTTCCTCTACAACTGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GCTCAGACCTTCTTTGAAGATCGTGTACCAGACAATTaGGTGGGGTGTGGGCTGCCTGTGCTTAAGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AQTFFEDRVPDN*VGCGLPVLKGQ Trigger: CTGGCCCTTAAGCACAGGCAGCCCACACCCCACCCAATTGTCTGGTACACGATCTTCAAAGAAGGTCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GCCTGGGAAATGTGGCCGGGAAGAGCTGTTGGCAGGTaGCTCAGACCTTCTTTGAAGATCGTGTACCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: AWEMWPGRAVGR*LRPSLKIVYQT Trigger: TGTCTGGTACACGATCTTCAAAGAAGGTCTGAGCCACCTGCCAACAGCTCTTCCCGGCCACATTTCCCAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTTGGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGTCTGCCATCTGTACCCCCAATCTaGCTCCACCAACTCCCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: CWPCWPHFPPGCEDGGLPSVPPI*LHQLPK Trigger: CTTAGGGAGTTGGTGGAGCAAGATTGGGGGTACAGA...TGGCAGACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | GTCTTTAGCAACAGGCCAGCACCTGCCTTCCCCAGTTaGGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: VFSNRPAPAFPS*VIFRGEARGQA Trigger: AGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGGCAGGTGCTGGCCTGTTGCTAAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | TCTGGACACACAACCGTGGGAGTATGTGTGGTGGTCTaGGTCCTTATGGAGTCAGTCCTAGGAAGAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGHTTVGVCVVV*VLMESVLGREQ Trigger: CTGCTCTCTTCCTAGGACTGACTCCATAAGGACCCAGACCACCACACATACTCCCACGGTTGTGTGTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | AAGGTCAGCCTGGGAAATGTGGCCGGGAAGAGCTGTTaGCAGGTGGCTCAGACCTTCTTTGAAGATCGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: KVSLGNVAGKSC*QVAQTFFEDRV Trigger: TACACGATCTTCAAAGAAGGTCTGAGCCACCTGCCAACAGCTCTTCCCGGCCACATTTCCCAGGCTGACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GAGAGCAATGTAAGGCTGACTGGCTGTTGGCCATGTTaGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ESNVRLTGCWPC*PHFPPGCEDGG Trigger: ACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACAGCCAGTCAGCCTTACATTGCTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GCAGCTTCTGAGAGCAATGTAAGGCTGACTGGCTGTTaGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: AASESNVRLTGC*PCWPHFPPGCE Trigger: TTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACAGCCAGTCAGCCTTACATTGCTCTCAGAAGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GAGCCAATCCCATCACAGCAACCCCACATTCCACCCTaGAGCCAGGGCCAGCATTCCTATCTGTTTAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: EPIPSQQPHIPP*SQGQHSYLFNC Trigger: ACAGTTAAACAGATAGGAATGCTGGCCCTGGCTCCAGGGTGGAATGTGGGGTTGCTGTGATGGGATTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | GCTCTGTGGAGTACTTGCCTCTCACGCAGGAGGCCCTaGCTACATTCCTCAGCACTGCAGAAAAACACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ALWSTCLSRRRP*LHSSALQKNTK Trigger: TTTTGTGTTTTTCTGCAGTGCTGAGGAATGTAGGCAGGGCCTCCTGCGTGAGAGGCAAGTACTCCACAGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGAGGCAGGCTGGGACAGATGGGTTTACCAGACAAAGGTTTTGGGGTAACCCTGATACATCTTTGCATTaGTGTCTGTCCCCAGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: GRQAGTDGFTRQRFWGNPDTSLH*CLSPET Trigger: TGTCTCTGGGGACAGACACAAATGCAAAGATGTATC...AGGGTTACCCCAAAACCTTTGTCTGGTAAACCCATCTGTCCCAGCCTGCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGTCTTACGATACATCTTaGCATTTGTGTCTGTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQSYDTS*HLCLSP Trigger: TGGGGACAGACACAAATGCAAAGATGTATCGTAAGA...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | GACCACAGATTGCTGTGTGTATTTCGGGCAGGTATATaGGCTGTGGGGGCTGAGGCCTCTTTATCCCCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: DHRLLCVFRAGI*AVGAEASLSPK Trigger: TTTAGGGGATAAAGAGGCCTCAGCCCCCACAGCTCATATACCTGCCCGAAATACACACAGCAATCTGTGGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | ATAGCTGCCTCCCAGGTTATCACCGTGACCACAGATTaGTGTGTGTATTTCGGGCAGGTATATGAGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: IAASQVITVTTD*CVYFGQVYELW Trigger: CCACAGCTCATATACCTGCCCGAAATACACACAGCAATCTGTGGTCACGGTGATAACCTGGGAGGCAGCTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | ATAAACAGCATCCTGAAACATGGGACTGGACCACCCTaGACTACTGACTCTCCCAGGTTCCCGTCTCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: INSILKHGTGPP*TTDSPRFPSLL Trigger: TAGAAGAGACGGGAACCTGGGAGAGTCAGTAGTGCAGGGTGGTCCAGTCCCATGTTTCAGGATGCTGTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GCTCCTGCTGCTGTGCCTTTCCCCGCTGTGATGGACTaGATCTCATCAAACCCAAGAGTCAAAATTGACACT | + |
|
Preference number: 3 (lower is better) Translates to: APAAVPFPAVMD*ISSNPRVKIDT Trigger: AGTGTCAATTTTGACTCTTGGGTTTGATGAGATCCAGTCCATCACAGCGGGGAAAGGCACAGCAGCAGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | TGTCTGTCCCCAGAGACACAGGGTGCTAAGTCTCACTaGACACTGGGTACCCTAATAAGACTCAAACAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CLSPETQGAKSH*TLGTLIRLKQA Trigger: AGCCTGTTTGAGTCTTATTAGGGTACCCAGTGTTCAGTGAGACTTAGCACCCTGTGTCTCTGGGGACAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | ACCTGTTACCTGCAGATGGTGGGACAGGGTGAGTGTTaGTGCTTAGGAGTCTTAGATAAGGGGGCTTTATGG | + |
|
Preference number: 3 (lower is better) Translates to: TCYLQMVGQGEC*CLGVLDKGALW Trigger: CCATAAAGCCCCCTTATCTAAGACTCCTAAGCATCAACACTCACCCTGTCCCACCATCTGCAGGTAACAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | TCTCCGTGCAAATACTGTCTTGAGAACTCAATTGTTTaGAGAGTCCCACAGGTGGGCCTACGCCAGTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SPCKYCLENSIV*RVPQVGLRQFR Trigger: CCTGAACTGGCGTAGGCCCACCTGTGGGACTCTTCAAACAATTGAGTTCTCAAGACAGTATTTGCACGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | ACTGCTGTACTTCCGTCTCCCCTATTGTTTGGAGGCTaGCCCTGCTCTAACTCTTCCTGTGATACGGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TAVLPSPLLFGG*PCSNSSCDTGK Trigger: TTTACCCGTATCACAGGAAGAGTTAGAGCAGGGTCAGCCTCCAAACAATAGGGGAGACGGAAGTACAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CCA 72 bp | GGTTCTGGCTTCTACATGATTCTAGAAGAGTTCCTCTaGGTGTGTTTCTGTGGCCCAGAGAGGAGGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: GSGFYMILEEFL*VCFCGPERRET Trigger: TGTTTCCCTCCTCTCTGGGCCACAGAAACACACCCAGAGGAACTCTTCTAGAATCATGTAGAAGCCAGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR TCA 72 bp | TCTTGTCCCCAACCTCTCTCCGTGCAAATACTGTCTTaGGAACTCAATTGTTTGAAGAGTCCCACAGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SCPQPLSVQILS*ELNCLKSPTGG Trigger: CCCACCTGTGGGACTCTTCAAACAATTGAGTTCTCAAGACAGTATTTGCACGGAGAGAGGTTGGGGACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | AGGGGTAATGTCTCTCTACAAATGCTTGAAGATAGCTaGCTCCCAGGTTATCACCGTGACCACAGATTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGNVSLQMLEDS*LPGYHRDHRLL Trigger: CAGCAATCTGTGGTCACGGTGATAACCTGGGAGGCAGCTATCTTCAAGCATTTGTAGAGAGACATTACCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR GCA 72 bp | TCAGAAGACACGGCCAAGAGTCTTACGATACATCTTTaGATTTGTGTCTGTCCCCAGAGACACAGGGTGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SEDTAKSLTIHL*ICVCPQRHRVL Trigger: TAGCACCCTGTGTCTCTGGGGACAGACACAAATGCAAAGATGTATCGTAAGACTCTTGGCCGTGTCTTCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CAA 72 bp | CTGGCCCTCTCAGCCTGCCCCACTTGCGGTAGGTTGTaGGTTCTGTCTCCCCTCCAGGCTGGCCTCAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LALSACPTCGRL*VLSPLQAGLRT Trigger: GGTCCTGAGGCCAGCCTGGAGGGGAGACAGAACCAACAACCTACCGCAAGTGGGGCAGGCTGAGAGGGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | ACACTGGCCCTCTCAGCCTGCCCCACTTGCGGTAGGTaGTTGGTTCTGTCTCCCCTCCAGGCTGGCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLALSACPTCGR*LVLSPLQAGLR Trigger: CCTGAGGCCAGCCTGGAGGGGAGACAGAACCAACAACCTACCGCAAGTGGGGCAGGCTGAGAGGGCCAGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CAA 72 bp | CAGTGTCTCACAGGAGGTGCCAGCTTCCTTTGGTGTTaGCTGCGGGCTGTAGGTGAGGCCTTGGGCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QCLTGGASFLWC*LRAVGEALGWS Trigger: GGACCAGCCCAAGGCCTCACCTACAGCCCGCAGCAAACACCAAAGGAAGCTGGCACCTCCTGTGAGACACTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | CATGCCCTGCAGGGGGTGCTATGGGGTCCTGGTGTCTaGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HALQGVLWGPGV*YQSSAPTSPPQ Trigger: CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAGCACCCCCTGCAGGGCATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | CCCGCAAGAGCCATGGCCTCAGGCCTCAAGCCTCTCTaGGTGTCTTTAGCAACAGGCCAGCACCTGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PARAMASGLKPL*VSLATGQHLPS Trigger: GGAAGGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCCATGGCTCTTGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | CCAATCCAGAGGCCCTGGCCAGTGGCCCAGAGGTGCTaGGGGACTTTTAAAGGTCAGCCTGGGAAATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIQRPWPVAQRC*GTFKGQPGKCG Trigger: GCCACATTTCCCAGGCTGACCTTTAAAAGTCCCCAAGCACCTCTGGGCCACTGGCCAGGGCCTCTGGATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGAGCTGCCAAGGGCTCTaGGATCTGGGCTACAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PSPVESSSEERLEVKLGSSCQGL*DLGYNP Trigger: GGGATTGTAGCCCAGATCTCAGAGCCCTTGGCAGCT...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCCAGTTGAGTCATCTTCAGAGGAGAGGCTAGAGGTCAAGCTGGGGTCGCTCGGGAACCTCTGCTaGGTCTGTACGTCCATCACC | + |
|
Preference number: 4 (lower is better) Translates to: PSPVESSSEERLEVKLGSLGNLC*VCTSIT Trigger: GGTGATGGACGTACAGACCCAGCAGAGGTTCCCGAG...CGACCCCAGCTTGACCTCTAGCCTCTCCTCTGAAGATGACTCAACTGGGGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR TCA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGCGGCGAGTGGGGCAATaGCAGACTTGGCAATCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQRRVGQ*QTWQSL Trigger: CAAAGATTGCCAAGTCTGTCATTGCCCCACTCGCCG...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | TACCCACTCCCCTGCCTCGGGATAACGGAAATGATTTaGGCATACAGGAGGAGGGCCGGGAGGACTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YPLPCLGITEMI*AYRRRAGRTTA Trigger: AGCAGTAGTCCTCCCGGCCCTCCTCCTGTATGCCAAAATCATTTCCGTTATCCCGAGGCAGGGGAGTGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTGGACACACAACCGTGGGAGTATGTGTGGTGGTCTGGGTCCTTATGGACAGTGGGTGGATGACTaGCCTCTGGACCATCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFWTHNRGSMCGGLGPYGQWVDD*PLDHLG Trigger: CCCAAGATGGTCCAGAGGCCAGTCATCCACCCACTG...TCCATAAGGACCCAGACCACCACACATACTCCCACGGTTGTGTGTCCAGAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | GTTCCTCTGGGTGTGTTTCTGTGGCCCAGAGAGGAGGGAAACACAGTTTGTACAGGGCTAGACAGTGGGTaGATGACTGGCCTCTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VPLGVFLWPREEGNTVCTGLDSG*MTGLWT Trigger: GGTCCAGAGGCCAGTCATCCACCCACTGTCTAGCCC...TGTACAAACTGTGTTTCCCTCCTCTCTGGGCCACAGAAACACACCCAGAGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCAAGGGCTCTGAGATCTaGGCTACAATCCCACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRPQASLGVFSNRPAPAKGSEI*ATIPHS Trigger: TGAATGTGGGATTGTAGCCCAGATCTCAGAGCCCTT...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCAGTACTGATGTAATATaGTGGGATGTCTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRPQASLGVFSNRPAPASTDVI*WDVCSC Trigger: GCAGCTGCAGACATCCCAGCATATTACATCAGTACT...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | ACCTCCATTCTGAGGGAACCAGCCCCTGAACCTCTAAAACTAGAGCAGCAACCAGCTTGGGCTAGACAGTaGGTGGATGACTGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSILREPAPEPLKLEQQPAWARQ*VDDWPL Trigger: CAGAGGCCAGTCATCCACCCACTGTCTAGCCCAAGC...TGGTTGCTGCTCTAGTTTTAGAGGTTCAGGGGCTGGTTCCCTCAGAATGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR TCA 90 bp | GGGAGGCAGGCTGGGACAGATGGGTTTACCAGACAAAGGTTTTGGGGTAACCCTTACGTCCATCACCAGTaGGATGTAGCCCTCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRQAGTDGFTRQRFWGNPYVHHQ*DVALNE Trigger: CTCATTGAGGGCTACATCTCACTGGTGATGGACGTA...AGGGTTACCCCAAAACCTTTGTCTGGTAAACCCATCTGTCCCAGCCTGCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTCTGGACACACAACCGTGGGAGTATGTGTGGTGGTCTGGGTCCTTATGGAGAGAAGAAGCGGATGTaGCCACAATCGTCACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFWTHNRGSMCGGLGPYGEKKRM*PQSSLA Trigger: TGCCAGTGACGATTGTGGCCACATCCGCTTCTTCTC...TCCATAAGGACCCAGACCACCACACATACTCCCACGGTTGTGTGTCCAGAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGCTGACCTTCAGGGCATaGATAACCCCACTGATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQLTFRA*ITPLIF Trigger: GAATATCAGTGGGGTTATCCATGCCCTGAAGGTCAG...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | GCCCATGGAAACCTGAATTTTGCCCAGTCTAGAGCTTaGTGGACCCTTTCCCAAGGTGAGTTCCTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHGNLNFAQSRA*WTLSQGEFLGS Trigger: GCTTCCCAGGAACTCACCTTGGGAAAGGGTCCACAAAGCTCTAGACTGGGCAAAATTCAGGTTTCCATGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR GCA 90 bp | TGCTTGAAGATAGCTGCCTCCCAGGTTATCACCGTGACCACAGATTGCTGTGTGAGGGTTGTCCTCCTATaGGCACCATCTTCCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLKIAASQVITVTTDCCVRVVLL*APSSRA Trigger: AGCTCTGGAAGATGGTGCGCATAGGAGGACAACCCT...CACACAGCAATCTGTGGTCACGGTGATAACCTGGGAGGCAGCTATCTTCAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | CGGGTAGAGTCCTATCAATTCAAGGCCAGCCTGGTCTACAAAGAGAGTTCCAGGTGGATGACTGGCCTCTaGACCATCTTGGGCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RVESYQFKASLVYKESSRWMTGL*TILGFT Trigger: TGTGAAGCCCAAGATGGTCCAGAGGCCAGTCATCCA...CCTGGAACTCTCTTTGTAGACCAGGCTGGCCTTGAATTGATAGGACTCTACCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGACTGATGTAATATGCTaGGATGTCTGCAGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQTDVIC*DVCSCQ Trigger: TTGGCAGCTGCAGACATCCCAGCATATTACATCAGT...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | TGTTGGCCATGTTGGCCTCACTTCCCTCCTGGATGTGAAGATGGAGGTCTGCCAGGTCCTTCACTCCATTaGAGTAGAACATCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CWPCWPHFPPGCEDGGLPGPSLH*SRTSHP Trigger: TGGATGTGATGTTCTACTCCAATGGAGTGAAGGACC...TGGCAGACCTCCATCTTCACATCCAGGAGGGAAGTGAGGCCAACATGGCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | AGAAACCCCGCAGGGGTAATGTCTCTCTACAAATGCTaGAAGATAGCTGCCTCCCAGGTTATCACCGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: RNPAGVMSLYKC*KIAASQVITVT Trigger: GGTCACGGTGATAACCTGGGAGGCAGCTATCTTCAAGCATTTGTAGAGAGACATTACCCCTGCGGGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | GGAGGACTACTGCTGTACTTCCGTCTCCCCTATTGTTaGGAGGCTGACCCTGCTCTAACTCTTCCTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GGLLLYFRLPYC*EADPALTLPVI Trigger: TATCACAGGAAGAGTTAGAGCAGGGTCAGCCTCCAAACAATAGGGGAGACGGAAGTACAGCAGTAGTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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| 3UTR CAA 72 bp | CTCAGAAGACACGGCCAAGAGTCTTACGATACATCTTaGCATTTGTGTCTGTCCCCAGAGACACAGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRRHGQESYDTS*HLCLSPETQGA Trigger: AGCACCCTGTGTCTCTGGGGACAGACACAAATGCAAAGATGTATCGTAAGACTCTTGGCCGTGTCTTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | ACCTCTCTCCGTGCAAATACTGTCTTGAGAACTCAATaGTTTGAAGAGTCCCACAGGTGGGCCTACGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSLRANTVLRTQ*FEESHRWAYAS Trigger: ACTGGCGTAGGCCCACCTGTGGGACTCTTCAAACAATTGAGTTCTCAAGACAGTATTTGCACGGAGAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| 3UTR CAA 72 bp | AGACACGGCCAAGAGTCTTACGATACATCTTTGCATTaGTGTCTGTCCCCAGAGACACAGGGTGCTAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHGQESYDTSLH*CLSPETQGAKS Trigger: AGACTTAGCACCCTGTGTCTCTGGGGACAGACACAAATGCAAAGATGTATCGTAAGACTCTTGGCCGTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR TCA 90 bp | TCCCCAACCTCTCTCCGTGCAAATACTGTCTTGAGAACTCAATTGTTTGAAGAGGTAGCCCTCAATGAGTaGGAAGGAGAAGAAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPTSLRANTVLRTQLFEEVALNE*EGEEAD Trigger: ATCCGCTTCTTCTCCTTCTCACTCATTGAGGGCTAC...CTCTTCAAACAATTGAGTTCTCAAGACAGTATTTGCACGGAGAGAGGTTGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCTGTATGCAAAGACAACGAAGAAGAAACCCCGCAGGGGTAATGTCTCTCACTGATATTCTCTTCTaGAACCAATGCATGGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATCMQRQRRRNPAGVMSLTDILF*NQCMVE Trigger: TTCGACCATGCATTGGTTCCAGAAGAGAATATCAGT...GAGAGACATTACCCCTGCGGGGTTTCTTCTTCGTTGTCTTTGCATACAGGTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CAA 90 bp | GGCCTCAGGCCTCAAGCCTCTCTTGGTGTCTTTAGCAACAGGCCAGCACCTGCCATCAAATCCCAAGGGTaGTCCTCCTATGCGCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: GLRPQASLGVFSNRPAPAIKSQG*SSYAHH Trigger: ATGGTGCGCATAGGAGGACAACCCTTGGGATTTGAT...GGCAGGTGCTGGCCTGTTGCTAAAGACACCAAGAGAGGCTTGAGGCCTGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGGCAGGCTGGGACAGATGGGTTTACCAGACAAAGGTTTTGGGGTAACCCTCAGACTTGGCAATCTTaGTCACACCGATGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRQAGTDGFTRQRFWGNPQTWQS*SHRWAG Trigger: CCCAGCCCATCGGTGTGACAAAGATTGCCAAGTCTG...AGGGTTACCCCAAAACCTTTGTCTGGTAAACCCATCTGTCCCAGCCTGCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CAA 90 bp | CTATGGGGTCCTGGTGTCTTGTATCAGAGCTCTGCTCCCACTAGCCCTCCTCAGGGCTTCACAAAGCCATaGGTGAAGCTGAGATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LWGPGVLYQSSAPTSPPQGFTKP*VKLRFS Trigger: TGAGAATCTCAGCTTCACCAATGGCTTTGTGAAGCC...CTGAGGAGGGCTAGTGGGAGCAGAGCTCTGATACAAGACACCAGGACCCCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CAA 90 bp | GTTCCTCTGGGTGTGTTTCTGTGGCCCAGAGAGGAGGGAAACACAGTTTGTACAGGGGCAATGACAGACTaGGCAATCTTTGTCACACCG | + |
|
Preference number: 5 (lower is better) Translates to: VPLGVFLWPREEGNTVCTGAMTD*AIFVTP Trigger: CGGTGTGACAAAGATTGCCAAGTCTGTCATTGCCCC...TGTACAAACTGTGTTTCCCTCCTCTCTGGGCCACAGAAACACACCCAGAGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS-3UTR CAA 90 bp | GGCCCAGAGAGGAGGGAAACACAGTTTGTACAAGACTGTGCAGGGGTAGATAAAGTCAGACTGAAAAACTaGCACCTGGTCTTGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GPERRETQFVQDCAGVDKVRLKN*HLVLED Trigger: GTCTTCCAAGACCAGGTGCAAGTTTTTCAGTCTGAC...TTTATCTACCCCTGCACAGTCTTGTACAAACTGTGTTTCCCTCCTCTCTGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS GCA 90 bp | CTTCAGGGCATGGATAACCCCACTGATATTCTCTTCTGGAACCAATaGATGGTCGAACTTGAAAGTACTGATGTAATATGCTGGGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQGMDNPTDILFWNQ*MVELESTDVICWDV Trigger: GACATCCCAGCATATTACATCAGTACTTTCAAGTTCGACCATGCATTGGTTCCAGAAGAGAATATCAGTGGGGTTATCCATGCCCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS TCA 72 bp | GGTCCTTCACTCCATTGGAGTAGAACATCACATCCATaGGAAGGGTGGCGACGGCGGGCAGTGTGTCAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GPSLHWSRTSHP*EGWRRRAVCQG Trigger: ACCCTGACACACTGCCCGCCGTCGCCACCCTTCTCATGGATGTGATGTTCTACTCCAATGGAGTGAAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS TCA 72 bp | TTCCAGAGCTCTCCAGATGCACTCGTGAATAGCAAGTaGCTCGGGAACCTCTGCTGGGTCTGTACGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: FQSSPDALVNSK*LGNLCWVCTSI Trigger: GATGGACGTACAGACCCAGCAGAGGTTCCCGAGTCACTTGCTATTCACGAGTGCATCTGGAGAGCTCTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS CCA 72 bp | AGAAGGAGAAGAAGCGGATGTGGCCACAATCGTCACTaGCAGCCATGGGGTCCTTCACTCCATTGGAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRRSGCGHNRH*QPWGPSLHWSR Trigger: TCTACTCCAATGGAGTGAAGGACCCCATGGCTGCCAGTGACGATTGTGGCCACATCCGCTTCTTCTCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS GCA 72 bp | TCCCACATTCATCAAATCCCAAGGGTTGTCCTCCTATaGGCACCATCTTCCAGAGCTCTCCAGATGCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SHIHQIPRVVLL*APSSRALQMHS Trigger: CGAGTGCATCTGGAGAGCTCTGGAAGATGGTGCGCATAGGAGGACAACCCTTGGGATTTGATGAATGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS CCA 72 bp | AGAAGCGGATGTGGCCACAATCGTCACTGGCAGCCATaGGGTCCTTCACTCCATTGGAGTAGAACATCACAT | + |
|
Preference number: 6 (lower is better) Translates to: RSGCGHNRHWQP*GPSLHWSRTSH Trigger: ATGTGATGTTCTACTCCAATGGAGTGAAGGACCCCATGGCTGCCAGTGACGATTGTGGCCACATCCGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
||
| CDS GCA 72 bp | ATGGATAACCCCACTGATATTCTCTTCTGGAACCAATaGATGGTCGAACTTGAAAGTACTGATGTAATATGC | + |
|
Preference number: 6 (lower is better) Translates to: MDNPTDILFWNQ*MVELESTDVIC Trigger: GCATATTACATCAGTACTTTCAAGTTCGACCATGCATTGGTTCCAGAAGAGAATATCAGTGGGGTTATCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016088.9 |
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