Pregenerated sensors for CASQ2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027861Ensembl transcript IDs: ENSMUST00000029454.12, ENSMUST00000164123.2, ENSMUST00000165540.9
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTaGGCAGCCAGCAGACCCATTCAGAGACCTAAACGGTCTCCATCA | + |
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Preference number: 1 (lower is better) Translates to: SLAGTERVHSVPSSL*AASRPIQRPKRSPS Trigger: TGATGGAGACCGTTTAGGTCTCTGAATGGGTCTGCTGGCTGCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 90 bp | CTAGGTGTGGGCACCACTGCTTGCTGCCCCCTTGGGCTGTCTGTATaGTACATGGTGGTTGTAATGTCACTCATCAGAATCACCCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: LGVGTTACCPLGLSV*YMVVVMSLIRITQG Trigger: GCCCTGGGTGATTCTGATGAGTGACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACACCTAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 90 bp | GGAAAAGAGCTGACTAGGTGTGGGCACCACTGCTTGCTGCCCCCTTaGGCTGTCTGTATGGTACATGGTGGTTGTAATGTCACTCATCAG | + |
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Preference number: 1 (lower is better) Translates to: GKELTRCGHHCLLPP*AVCMVHGGCNVTHQ Trigger: CTGATGAGTGACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACACCTAGTCAGCTCTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 90 bp | AGGCTTGGGTCTGAGTTCACAGATGCTCTGGGTTTGGCGGGAGATTaGATAATCATGTGCCCTTCCTGGACTCTGATTAGAAGGCCACTC | + |
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Preference number: 1 (lower is better) Translates to: RLGSEFTDALGLAGD*IIMCPSWTLIRRPL Trigger: GAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCACATGATTATCCAATCTCCCGCCAAACCCAGAGCATCTGTGAACTCAGACCCAAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 90 bp | GATGCTCTGGGTTTGGCGGGAGATTGGATAATCATGTGCCCTTCCTaGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAACTAATAGCA | + |
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Preference number: 1 (lower is better) Translates to: DALGLAGDWIIMCPS*TLIRRPLPACELIA Trigger: TGCTATTAGTTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCACATGATTATCCAATCTCCCGCCAAACCCAGAGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCAGCCAGCAGACCCATTGTGGGCACCACTGCTTaGTGCCCCCTTGGGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TERVHSVPSSLWAASRPIVGTTA*CPLGLS Trigger: AGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCAC...AATGGGTCTGCTGGCTGCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR GCA 90 bp | ATCACTCCCCTTCTGTCCCTGCAGTGTGAGCCTGCTGGGTTTGGAAAGGCATTCAGGTGTGGGCACCACTaGTTGCTGCCCCCTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: ITPLLSLQCEPAGFGKAFRCGHH*LLPPWA Trigger: AGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACACCT...GAATGCCTTTCCAAACCCAGCAGGCTCACACTGCAGGGACAGAAGGGGAGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | GGACAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGTCTGTCCCTGCAGTGTaGGCCTGCTGGGTTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: GQLTSGDREGAFSSQLTLSVPAV*ACWVWK Trigger: TTTCCAAACCCAGCAGGCTCACACTGCAGGGACAGA...CAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCAGCCAGCAGACCCATTTCTGTCCCTGCAGTGTaGGCCTGCTGGGTTTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TERVHSVPSSLWAASRPISVPAV*ACWVWK Trigger: TTTCCAAACCCAGCAGGCTCACACTGCAGGGACAGA...AATGGGTCTGCTGGCTGCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | GGACAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGAGAAAGGAAAAGAGCTaGCTAGGTGTGGGCACCACT | + |
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Preference number: 2 (lower is better) Translates to: GQLTSGDREGAFSSQLTLRKEKS*LGVGTT Trigger: AGTGGTGCCCACACCTAGTCAGCTCTTTTCCTTTCT...CAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR GCA 90 bp | TCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTGTCCCTGCAGTGAGGTGTGGGCACCACTaGTTGCTGCCCCCTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SMVRSSQHGNHSPSVPAVRCGHH*LLPPWA Trigger: AGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACACCT...CACTGCAGGGACAGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CCA 90 bp | ATCACTCCCCTTCTGTCCCTGCAGTGTGAGCCTGCTGGGTTTGGAAAGGCATTCTGCTTGCTGCCCCCTTaGGCTGTCTGTATGGTACAT | + |
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Preference number: 2 (lower is better) Translates to: ITPLLSLQCEPAGFGKAFCLLPP*AVCMVH Trigger: ATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCA...GAATGCCTTTCCAAACCCAGCAGGCTCACACTGCAGGGACAGAAGGGGAGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | GGACAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGCAAGGCATTTCTAATTaGCATCCAAAGGCTTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: GQLTSGDREGAFSSQLTLQGISN*HPKAWV Trigger: GACCCAAGCCTTTGGATGTCAATTAGAAATGCCTTG...CAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGATTGTTCCTCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTGTGGGCACCACTGCTTaGTGCCCCCTTGGGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ADCSSMVRSSQHGNHSPSVGTTA*CPLGLS Trigger: AGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCAC...AGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGAGGAACAATCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CCA 90 bp | CACAGATGCTCTGGGTTTGGCGGGAGATTGGATAATCATGTGCCCTTCCTGGACTGCTTGCTGCCCCCTTaGGCTGTCTGTATGGTACAT | + |
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Preference number: 2 (lower is better) Translates to: HRCSGFGGRLDNHVPFLDCLLPP*AVCMVH Trigger: ATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCA...GTCCAGGAAGGGCACATGATTATCCAATCTCCCGCCAAACCCAGAGCATCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CAA 90 bp | ATGCTGGAGAAAGGAAAAGAGCTGACTAGGTGTGGGCACCACTGCTaGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGTGGTTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: MLEKGKELTRCGHHC*LPPWAVCMVHGGCN Trigger: ATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACACCTAGTCAGCTCTTTTCCTTTCTCCAGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CAA 90 bp | TGGGAATCACTCCCCTTCTGTCCCTGCAGTGTGAGCCTGCTGGGTTaGGAAAGGCATTCACTGAAATGTACCACTCCTGCCAAGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: WESLPFCPCSVSLLG*ERHSLKCTTPAKNR Trigger: TCTGTTCTTGGCAGGAGTGGTACATTTCAGTGAATGCCTTTCCAAACCCAGCAGGCTCACACTGCAGGGACAGAAGGGGAGTGATTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCAGCCAGCAGACCCATTGAATTCCATGACCCCTaGTTGTCTAGCAAAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: TERVHSVPSSLWAASRPIEFHDP*LSSKEQ Trigger: TTGTTCTTTGCTAGACAATCAGGGGTCATGGAATTC...AATGGGTCTGCTGGCTGCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTTCCTGGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAACTAATAGCAAGAAAGGAAAAGAGCTaGCTAGGTGTGGGCACCACT | + |
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Preference number: 2 (lower is better) Translates to: CPSWTLIRRPLPACELIARKEKS*LGVGTT Trigger: AGTGGTGCCCACACCTAGTCAGCTCTTTTCCTTTCT...TGCTATTAGTTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTTCCTGGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAACTAATAGCAGAATTCCATGACCCCTaGTTGTCTAGCAAAGAACAA | + |
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Preference number: 2 (lower is better) Translates to: CPSWTLIRRPLPACELIAEFHDP*LSSKEQ Trigger: TTGTTCTTTGCTAGACAATCAGGGGTCATGGAATTC...TGCTATTAGTTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR GCA 90 bp | ACAACACCACACAGAGTCTTCTCCATGTTAACAGATTTCAAAAATAAGTTAGGACGGGGACAGAGAGGGTaGATTCAGTTCCCAGCTCAC | + |
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Preference number: 2 (lower is better) Translates to: TTPHRVFSMLTDFKNKLGRGQRG*IQFPAH Trigger: GTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCG...TCCTAACTTATTTTTGAAATCTGTTAACATGGAGAAGACTCTGTGTGGTGTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CCA 90 bp | ACTAACACTACCAAGCACACTGTTACTTTCAGACAATTCAAAAGGCACTTGGGGGGGAGTGCTGATGAATaGGGAGAGTTAATTGACCAG | + |
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Preference number: 2 (lower is better) Translates to: TNTTKHTVTFRQFKRHLGGSADE*GELIDQ Trigger: CTGGTCAATTAACTCTCCCCATTCATCAGCACTCCC...CCCCAAGTGCCTTTTGAATTGTCTGAAAGTAACAGTGTGCTTGGTAGTGTTAGT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCATCATCCTAATATTCCAGAAATGATGGCAATGCCCACACATTTCAAGCTGATTGTTCCTCAATaGTTAGAAGTAGTCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: PTHHPNIPEMMAMPTHFKLIVPQ*LEVVSM Trigger: CATGCTGACTACTTCTAACCATTGAGGAACAATCAG...CTTGAAATGTGTGGGCATTGCCATCATTTCTGGAATATTAGGATGATGAGTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCTAATGTCCATTAGTTTATTACTATTCCATAAAAGGACTGCCCCAGTTTCATGGAAAGGCATTCACTaGAATGTACCACTCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: SLMSISLLLFHKRTAPVSWKGIH*NVPLLP Trigger: TGGCAGGAGTGGTACATTTCAGTGAATGCCTTTCCA...TGAAACTGGGGCAGTCCTTTTATGGAATAGTAATAAACTAATGGACATTAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCTAATGTCCATTAGTTTATTACTATTCCATAAAAGGACTGCCCCAGTTTCACAAGGCATTTCTAATTaGCATCCAAAGGCTTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: SLMSISLLLFHKRTAPVSQGISN*HPKAWV Trigger: GACCCAAGCCTTTGGATGTCAATTAGAAATGCCTTG...TGAAACTGGGGCAGTCCTTTTATGGAATAGTAATAAACTAATGGACATTAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CCA 90 bp | ACACCACACAGAGTCTTCTCCATGTTAACAGATTTCAAAAATAAGTTAGGACACCTGATTGTTCCTCAATaGTTAGAAGTAGTCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: TPHRVFSMLTDFKNKLGHLIVPQ*LEVVSM Trigger: CATGCTGACTACTTCTAACCATTGAGGAACAATCAG...GTGTCCTAACTTATTTTTGAAATCTGTTAACATGGAGAAGACTCTGTGTGGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CAA 90 bp | ATCACTCCCCTTCTGTCCCTGCAGTGTGAGCCTGCTGGGTTTGGAAAGGCATTCTGTGGGCACCACTGCTaGCTGCCCCCTTGGGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: ITPLLSLQCEPAGFGKAFCGHHC*LPPWAV Trigger: GACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACA...GAATGCCTTTCCAAACCCAGCAGGCTCACACTGCAGGGACAGAAGGGGAGTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 72 bp | GGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTaGGCAGCCAGCAGACCCATTCAGAGACCTAAACGG | + |
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Preference number: 3 (lower is better) Translates to: GTERVHSVPSSL*AASRPIQRPKR Trigger: CCGTTTAGGTCTCTGAATGGGTCTGCTGGCTGCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCGTGAGCCTGCTGGGTTaGGAAAGGCATTCACTGAAA | + |
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Preference number: 3 (lower is better) Translates to: QLTSGDREGAFSSQLTLGVSLLG*ERHSLK Trigger: TTTCAGTGAATGCCTTTCCAAACCCAGCAGGCTCAC...GCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCACAGATGCTCTGGGTTaGGCGGGAGATTGGATAATC | + |
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Preference number: 3 (lower is better) Translates to: QLTSGDREGAFSSQLTLGTDALG*AGDWII Trigger: GATTATCCAATCTCCCGCCAAACCCAGAGCATCTGT...GCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 72 bp | CTGACTAGGTGTGGGCACCACTGCTTGCTGCCCCCTTaGGCTGTCTGTATGGTACATGGTGGTTGTAATGTC | + |
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Preference number: 3 (lower is better) Translates to: LTRCGHHCLLPP*AVCMVHGGCNV Trigger: GACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACACCTAGTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR GCA 72 bp | GAGAAAGGAAAAGAGCTGACTAGGTGTGGGCACCACTaGTTGCTGCCCCCTTGGGCTGTCTGTATGGTACAT | + |
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Preference number: 3 (lower is better) Translates to: EKGKELTRCGHH*LLPPWAVCMVH Trigger: ATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACACCTAGTCAGCTCTTTTCCTTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR GCA 72 bp | GATGCTCTGGGTTTGGCGGGAGATTGGATAATCATGTaGCCTTCCTGGACTCTGATTAGAAGGCCACTCCCT | + |
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Preference number: 3 (lower is better) Translates to: DALGLAGDWIIM*PSWTLIRRPLP Trigger: AGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCACATGATTATCCAATCTCCCGCCAAACCCAGAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 72 bp | GGCACCACTGCTTGCTGCCCCCTTGGGCTGTCTGTATaGTACATGGTGGTTGTAATGTCACTCATCAGAATC | + |
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Preference number: 3 (lower is better) Translates to: GTTACCPLGLSV*YMVVVMSLIRI Trigger: GATTCTGATGAGTGACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CAA 90 bp | ACTAACACTACCAAGCACACTGTTACTTTCAGACAATTCAAAAGGCACTTGGGGTGTGGGCACCACTGCTaGCTGCCCCCTTGGGCTGTC | + |
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Preference number: 3 (lower is better) Translates to: TNTTKHTVTFRQFKRHLGCGHHC*LPPWAV Trigger: GACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACA...CCCCAAGTGCCTTTTGAATTGTCTGAAAGTAACAGTGTGCTTGGTAGTGTTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CAA 90 bp | CACAGATGCTCTGGGTTTGGCGGGAGATTGGATAATCATGTGCCCTTCCTGGACGTGAGCCTGCTGGGTTaGGAAAGGCATTCACTGAAA | + |
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Preference number: 3 (lower is better) Translates to: HRCSGFGGRLDNHVPFLDVSLLG*ERHSLK Trigger: TTTCAGTGAATGCCTTTCCAAACCCAGCAGGCTCAC...GTCCAGGAAGGGCACATGATTATCCAATCTCCCGCCAAACCCAGAGCATCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 72 bp | GGTTTGGCGGGAGATTGGATAATCATGTGCCCTTCCTaGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAA | + |
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Preference number: 3 (lower is better) Translates to: GLAGDWIIMCPS*TLIRRPLPACE Trigger: TTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCACATGATTATCCAATCTCCCGCCAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 72 bp | GTCGCTGCCCTGGTCAACTGTGGGAGTGCTGATGAATaGGGAGAGTTAATTGACCAGTGGATAAAGCGATTT | + |
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Preference number: 3 (lower is better) Translates to: VAALVNCGSADE*GELIDQWIKRF Trigger: AAATCGCTTTATCCACTGGTCAATTAACTCTCCCCATTCATCAGCACTCCCACAGTTGACCAGGGCAGCGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCCAGCAGACCCATTCAGAGACCTAAACGGTCTCCATCAGAAAAATGAAAAGGGGTTTGGCGGGAGATaGGATAATCATGTGCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: QPADPFRDLNGLHQKNEKGFGGR*DNHVPF Trigger: GAAGGGCACATGATTATCCAATCTCCCGCCAAACCC...CTTTTCATTTTTCTGATGGAGACCGTTTAGGTCTCTGAATGGGTCTGCTGGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR TCA 72 bp | GATACAGTCCCCAGACTCCCAGAATTCCATGACCCCTaGTTGTCTAGCAAAGAACAAGGGCTGATTGTTCCT | + |
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Preference number: 3 (lower is better) Translates to: DTVPRLPEFHDP*LSSKEQGLIVP Trigger: AGGAACAATCAGCCCTTGTTCTTTGCTAGACAATCAGGGGTCATGGAATTCTGGGAGTCTGGGGACTGTATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CCA 72 bp | TCTGAGTTCACAGATGCTCTGGGTTTGGCGGGAGATTaGATAATCATGTGCCCTTCCTGGACTCTGATTAGA | + |
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Preference number: 3 (lower is better) Translates to: SEFTDALGLAGD*IIMCPSWTLIR Trigger: TCTAATCAGAGTCCAGGAAGGGCACATGATTATCCAATCTCCCGCCAAACCCAGAGCATCTGTGAACTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCCAGCAGACCCATTCAGAGACCTAAACGGTCTCCATCAGAAAAATGAAAAGACAGATGCTCTGGGTTaGGCGGGAGATTGGATAATC | + |
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Preference number: 3 (lower is better) Translates to: QPADPFRDLNGLHQKNEKTDALG*AGDWII Trigger: GATTATCCAATCTCCCGCCAAACCCAGAGCATCTGT...CTTTTCATTTTTCTGATGGAGACCGTTTAGGTCTCTGAATGGGTCTGCTGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR TCA 72 bp | TTTATCCTTCAGCCTCTCTTACCACTGGTGAATATATaGGGCTTGGCAATTAATGGGATGTTCATAGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: FILQPLLPLVNI*GLAINGMFIEL Trigger: TAGCTCTATGAACATCCCATTAATTGCCAAGCCTCATATATTCACCAGTGGTAAGAGAGGCTGAAGGATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR TCA 72 bp | AAAAGCCTTTTATCCTTCAGCCTCTCTTACCACTGGTaGATATATGAGGCTTGGCAATTAATGGGATGTTCA | + |
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Preference number: 3 (lower is better) Translates to: KSLLSFSLSYHW*IYEAWQLMGCS Trigger: TGAACATCCCATTAATTGCCAAGCCTCATATATTCACCAGTGGTAAGAGAGGCTGAAGGATAAAAGGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR GCA 90 bp | ACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCAGCCAGCAGACCCATTGTTCAGCCCCTCTTCTaGCCCGCTCAGGGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TERVHSVPSSLWAASRPIVQPLF*PAQGQQ Trigger: CTGCTGTCCCTGAGCGGGGCAGAAGAGGGGCTGAAC...AATGGGTCTGCTGGCTGCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR GCA 90 bp | CACAGATGCTCTGGGTTTGGCGGGAGATTGGATAATCATGTGCCCTTCCTGGACGTTCAGCCCCTCTTCTaGCCCGCTCAGGGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRCSGFGGRLDNHVPFLDVQPLF*PAQGQQ Trigger: CTGCTGTCCCTGAGCGGGGCAGAAGAGGGGCTGAAC...GTCCAGGAAGGGCACATGATTATCCAATCTCCCGCCAAACCCAGAGCATCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR TCA 90 bp | GGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCAGCCAGCAGACCCTCTTCAACATCTGCTTaGGGTTCTTCTCAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTERVHSVPSSLWAASRPSSTSA*GSSQKG Trigger: GCCTTTCTGAGAAGAACCTCAAGCAGATGTTGAAGA...GGGTCTGCTGGCTGCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| 3UTR CAA 72 bp | CTCCCCTTCTGTCCCTGCAGTGTGAGCCTGCTGGGTTaGGAAAGGCATTCACTGAAATGTACCACTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPFCPCSVSLLG*ERHSLKCTTPA Trigger: GGCAGGAGTGGTACATTTCAGTGAATGCCTTTCCAAACCCAGCAGGCTCACACTGCAGGGACAGAAGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| 3UTR CAA 72 bp | AAAGGAAAAGAGCTGACTAGGTGTGGGCACCACTGCTaGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKELTRCGHHC*LPPWAVCMVHG Trigger: ACCATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCACACCTAGTCAGCTCTTTTCCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR GCA 90 bp | ACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCAGCCAGCAGACCCATTCGTCAAACTCAATCGTaGGGTCACCCTTCAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: TERVHSVPSSLWAASRPIRQTQS*GHPSEH Trigger: ATGTTCTGAAGGGTGACCGCACGATTGAGTTTGACG...AATGGGTCTGCTGGCTGCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR GCA 90 bp | GGACAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGCTGGAAGTGTTCAGCTaGCTCTTGGAATGCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GQLTSGDREGAFSSQLTLLEVFS*LLECFV Trigger: TACAAAGCATTCCAAGAGGCAGCTGAACACTTCCAG...CAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCACCACTGCTTGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGTGGTTGCATCATCTTCAGTGTTaGTCTTTCCAGAAAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: WAPLLAAPLGCLYGTWWLHHLQC*SFQKAH Trigger: ATGTGCTTTCTGGAAAGATCAACACTGAAGATGATG...CAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGTGGTTGTAATGTCACTCATCATGCGCTCAAAGGCCTaGACCTCCAGCTTGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: CCPLGLSVWYMVVVMSLIMRSKA*TSSLLF Trigger: GAATAACAAGCTGGAGGTCCAGGCCTTTGAGCGCAT...GATGAGTGACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR TCA 90 bp | TTGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGTGGTTGTAATGTCACTCATCTGAGTCCTCATTCTTaGAGAAGCCAAGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPWAVCMVHGGCNVTHLSPHS*RSQGAW Trigger: CCAAGCTCCTTGGCTTCTTCAAGAATGAGGACTCAG...ATGAGTGACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR TCA 90 bp | TGCCCTTCCTGGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAACTAATAGCACGTAGGGTGGGTCTTTaGTGTTCCTTCACAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPSWTLIRRPLPACELIARRVGL*CSFTNS Trigger: GGAGTTTGTGAAGGAACATCAAAGACCCACCCTACG...TGCTATTAGTTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR GCA 90 bp | GGACAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGTATCTCTTCAACATCTaGTTGAGGTTCTTCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GQLTSGDREGAFSSQLTLYLFNI*LRFFSE Trigger: TTCTGAGAAGAACCTCAAGCAGATGTTGAAGAGATA...CAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGCTGGGTTTGGAAAGGCATTCACTGAAATGTACCACTCCTGCCAAGAAGCAAAGGCCACGATGTaGATCCCATTCAAGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPAGFGKAFTEMYHSCQEAKATM*IPFKSS Trigger: AGACGACTTGAATGGGATCCACATCGTGGCCTTTGC...TTCTTGGCAGGAGTGGTACATTTCAGTGAATGCCTTTCCAAACCCAGCAGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGGTTTGGAAAGGCATTCACTGAAATGTACCACTCCTGCCAAGAACAGAGCAAAGGCCACGATGTaGATCCCATTCAAGTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLGLERHSLKCTTPAKNRAKATM*IPFKSS Trigger: AGACGACTTGAATGGGATCCACATCGTGGCCTTTGC...TCTGTTCTTGGCAGGAGTGGTACATTTCAGTGAATGCCTTTCCAAACCCAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CCA 90 bp | TCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTGTCCCTGCAGTGCACCACCCCAATCTGTaGCTTGAACAGGTCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SMVRSSQHGNHSPSVPAVHHPNL*LEQVNL Trigger: AAGATTGACCTGTTCAAGCCACAGATTGGGGTGGTG...CACTGCAGGGACAGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | CTGATTGTTCCTCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTGTTATGTTCCAGGACCTaGGCCACAAGCTCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: LIVPQWLEVVSMGITPLLLCSRT*ATSSST Trigger: TGTACTGGAGCTTGTGGCCCAGGTCCTGGAACATAA...CAGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGAGGAACAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CCA 90 bp | CTGATTGTTCCTCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTGATGCGCTCAAAGGCCTaGACCTCCAGCTTGTTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVPQWLEVVSMGITPLLMRSKA*TSSLLF Trigger: GAATAACAAGCTGGAGGTCCAGGCCTTTGAGCGCAT...CAGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGAGGAACAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | CTGCTGGGTTTGGAAAGGCATTCACTGAAATGTACCACTCCTGCCAAGAACAGAGAACTCATAGCCATCTaGGTCACTCTTCTCCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLERHSLKCTTPAKNRELIAI*VTLLRK Trigger: TTTGCGGAGAAGAGTGACCCAGATGGCTATGAGTTC...TCTGTTCTTGGCAGGAGTGGTACATTTCAGTGAATGCCTTTCCAAACCCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGTGGTTGTAATGTCACTCATATTCACGATCTCCACTaGGTCTTCAATGAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLPPWAVCMVHGGCNVTHIHDLH*VFNEIQ Trigger: TTGGATCTCATTGAAGACCCAGTGGAGATCGTGAAT...ATGAGTGACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | ATAATCATGTGCCCTTCCTGGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAACAGTGGAAAGTCATCTaGGTCAATCCACAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIMCPSWTLIRRPLPACEQWKVI*VNPQDA Trigger: AGCATCTTGTGGATTGACCCAGATGACTTTCCACTG...TTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCACATGATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CCA 90 bp | TGCCCTTCCTGGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAACTAATAGCAGTAAGCAACAAGCAGTaGAAAGTCATCTGGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CPSWTLIRRPLPACELIAVSNKQ*KVIWVN Trigger: ATTGACCCAGATGACTTTCCACTGCTTGTTGCTTAC...TGCTATTAGTTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR TCA 90 bp | GCTGATTGTTCCTCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTAGGTGGCAAAGAACTTaGTGTAAGGCTGGAAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ADCSSMVRSSQHGNHSPSRWQRT*CKAGSV Trigger: AACACTTCCAGCCTTACATCAAGTTCTTTGCCACCT...AGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGAGGAACAATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR TCA 90 bp | TGCCCTTCCTGGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAACTAATAGCACATCATCTTCAGTGTTaGTCTTTCCAGAAAGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: CPSWTLIRRPLPACELIAHHLQC*SFQKAH Trigger: ATGTGCTTTCTGGAAAGATCAACACTGAAGATGATG...TGCTATTAGTTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR GCA 90 bp | GCTGATTGTTCCTCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTCTGGAAGTGTTCAGCTaGCTCTTGGAATGCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ADCSSMVRSSQHGNHSPSLEVFS*LLECFV Trigger: TACAAAGCATTCCAAGAGGCAGCTGAACACTTCCAG...AGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGAGGAACAATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | ATAATCATGTGCCCTTCCTGGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAAACAATCTCCTTCAGCTaGAACTGTTTTTGTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: IIMCPSWTLIRRPLPACETISFS*NCFCET Trigger: GGTCTCACAAAAACAGTTCCAGCTGAAGGAGATTGT...TTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCACATGATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | CCCACTCATCATCCTAATATTCCAGAAATGATGGCAATGCCCACACATTTCAAGTTATGTTCCAGGACCTaGGCCACAAGCTCCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PTHHPNIPEMMAMPTHFKLCSRT*ATSSST Trigger: TGTACTGGAGCTTGTGGCCCAGGTCCTGGAACATAA...CTTGAAATGTGTGGGCATTGCCATCATTTCTGGAATATTAGGATGATGAGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR TCA 90 bp | CCCACTCATCATCCTAATATTCCAGAAATGATGGCAATGCCCACACATTTCAAGTCTTCAACATCTGCTTaGGGTTCTTCTCAGAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTHHPNIPEMMAMPTHFKSSTSA*GSSQKG Trigger: GCCTTTCTGAGAAGAACCTCAAGCAGATGTTGAAGA...CTTGAAATGTGTGGGCATTGCCATCATTTCTGGAATATTAGGATGATGAGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR TCA 90 bp | ATTCCAGAAATGATGGCAATGCCCACACATTTCAAGGCATTTCTAATTGACATCCGTAGGGTGGGTCTTTaGTGTTCCTTCACAAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPEMMAMPTHFKAFLIDIRRVGL*CSFTNS Trigger: GGAGTTTGTGAAGGAACATCAAAGACCCACCCTACG...GATGTCAATTAGAAATGCCTTGAAATGTGTGGGCATTGCCATCATTTCTGGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR TCA 90 bp | ACACCACACAGAGTCTTCTCCATGTTAACAGATTTCAAAAATAAGTTAGGACACCTGAGTCCTCATTCTTaGAGAAGCCAAGGAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPHRVFSMLTDFKNKLGHLSPHS*RSQGAW Trigger: CCAAGCTCCTTGGCTTCTTCAAGAATGAGGACTCAG...GTGTCCTAACTTATTTTTGAAATCTGTTAACATGGAGAAGACTCTGTGTGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | ACTAACACTACCAAGCACACTGTTACTTTCAGACAATTCAAAAGGCACTTGGGGACAATCTCCTTCAGCTaGAACTGTTTTTGTGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TNTTKHTVTFRQFKRHLGTISFS*NCFCET Trigger: GGTCTCACAAAAACAGTTCCAGCTGAAGGAGATTGT...CCCCAAGTGCCTTTTGAATTGTCTGAAAGTAACAGTGTGCTTGGTAGTGTTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR GCA 90 bp | ATGCCCACACATTTCAAGGCATTTCTAATTGACATCCAAAGGCTTGGGTCTGAGTATCTCTTCAACATCTaGTTGAGGTTCTTCTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MPTHFKAFLIDIQRLGSEYLFNI*LRFFSE Trigger: TTCTGAGAAGAACCTCAAGCAGATGTTGAAGAGATA...CTCAGACCCAAGCCTTTGGATGTCAATTAGAAATGCCTTGAAATGTGTGGGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | ACAACACCACACAGAGTCTTCTCCATGTTAACAGATTTCAAAAATAAGTTAGGAGAACTCATAGCCATCTaGGTCACTCTTCTCCGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TTPHRVFSMLTDFKNKLGELIAI*VTLLRK Trigger: TTTGCGGAGAAGAGTGACCCAGATGGCTATGAGTTC...TCCTAACTTATTTTTGAAATCTGTTAACATGGAGAAGACTCTGTGTGGTGTTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | AGTCTAATGTCCATTAGTTTATTACTATTCCATAAAAGGACTGCCCCAGTTTCACAGTGGAAAGTCATCTaGGTCAATCCACAAGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLMSISLLLFHKRTAPVSQWKVI*VNPQDA Trigger: AGCATCTTGTGGATTGACCCAGATGACTTTCCACTG...TGAAACTGGGGCAGTCCTTTTATGGAATAGTAATAAACTAATGGACATTAGACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CCA 90 bp | AGTCTAATGTCCATTAGTTTATTACTATTCCATAAAAGGACTGCCCCAGTTTCAGTAAGCAACAAGCAGTaGAAAGTCATCTGGGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLMSISLLLFHKRTAPVSVSNKQ*KVIWVN Trigger: ATTGACCCAGATGACTTTCCACTGCTTGTTGCTTAC...TGAAACTGGGGCAGTCCTTTTATGGAATAGTAATAAACTAATGGACATTAGACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | CAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGGGCATGCTCAAGTCAGGATaGTCAGTGTTGTCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QLTSGDREGAFSSQLTLGMLKSG*SVLSRA Trigger: TGCCCGGGACAACACTGACAATCCTGACTTGAGCAT...GCCCAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CAA 90 bp | GGACAGCTCACTAGCGGGGACAGAGAGGGTGCATTCAGTTCCCAGCTCACTCTGTCTGAGTCCTCATTCTaGAAGAAGCCAAGGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLTSGDREGAFSSQLTLSESSF*KKPRSL Trigger: CAAGCTCCTTGGCTTCTTCAAGAATGAGGACTCAGA...CAGAGTGAGCTGGGAACTGAATGCACCCTCTCTGTCCCCGCTAGTGAGCTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS CCA 90 bp | AAGAAGCCAAGGAGCTTGGTCTGGTCCTCGATGCGCTCAAAGGCCTaGACCTCCAGCTTGTTATTCACGATCTCCACTGGGTCTTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KKPRSLVWSSMRSKA*TSSLLFTISTGSSM Trigger: CATTGAAGACCCAGTGGAGATCGTGAATAACAAGCTGGAGGTCCAGGCCTTTGAGCGCATCGAGGACCAGACCAAGCTCCTTGGCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CAA 90 bp | TGGGCACCACTGCTTGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGTGGTTGGTGTTCAGCTGCCTCTaGGAATGCTTTGTAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: WAPLLAAPLGCLYGTWWLVFSCL*ECFVIF Trigger: GAATATTACAAAGCATTCCAAGAGGCAGCTGAACAC...CAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCAAGCAGTGGTGCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGTGGTTGTAATGTCACTCATCTCAGGATTGTCAGTGTaGTCCCGGGCAACCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CCPLGLSVWYMVVVMSLISGLSV*SRATCF Trigger: GAAACAGGTTGCCCGGGACAACACTGACAATCCTGA...GATGAGTGACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS CCA 90 bp | TGTTCCAGGACCTGGGCCACAAGCTCCAGTACAATCTCCTTCAGCTaGAACTGTTTTTGTGAGACCTTGTCTGAAGACACAGGTTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CSRTWATSSSTISFS*NCFCETLSEDTGSW Trigger: CCACGAACCTGTGTCTTCAGACAAGGTCTCACAAAAACAGTTCCAGCTGAAGGAGATTGTACTGGAGCTTGTGGCCCAGGTCCTGGAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGCCCCCTTGGGCTGTCTGTATGGTACATGGTGGTTGTAATGTCACTCATCTCAAGGATAACTTCTTaGCCACCGCCTTGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CCPLGLSVWYMVVVMSLISRITS*PPPCQR Trigger: CCTTTGACAAGGCGGTGGCAAAGAAGTTATCCTTGA...GATGAGTGACATTACAACCACCATGTACCATACAGACAGCCCAAGGGGGCAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS-3UTR CAA 90 bp | TGCCCTTCCTGGACTCTGATTAGAAGGCCACTCCCTGCTTGTGAACTAATAGCATCTTCTGTGTACGGTTaGTTAGGGATGACGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CPSWTLIRRPLPACELIASSVYG*LGMTLG Trigger: GCCCAACGTCATCCCTAACAAACCGTACACAGAAGA...TGCTATTAGTTCACAAGCAGGGAGTGGCCTTCTAATCAGAGTCCAGGAAGGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS TCA 90 bp | CCTGGACCTCCAGCTTGTTATTCACGATCTCCACTGGGTCTTCAATaGGATCCAAGAGAAATTCCACTAAGACATCTGCTGCGAACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGPPACYSRSPLGLQ*DPREIPLRHLLRTP Trigger: GGGAGTTCGCAGCAGATGTCTTAGTGGAATTTCTCTTGGATCTCATTGAAGACCCAGTGGAGATCGTGAATAACAAGCTGGAGGTCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS TCA 90 bp | CAGCTGCCTCTTGGAATGCTTTGTAATATTCTGAGTCCTCATTCTTaGAGAAGCCAAGGAGCTTGGTCTGGTCCTCGATGCGCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLPLGMLCNILSPHS*RSQGAWSGPRCAQR Trigger: CCTTTGAGCGCATCGAGGACCAGACCAAGCTCCTTGGCTTCTTCAAGAATGAGGACTCAGAATATTACAAAGCATTCCAAGAGGCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | GCTGATTGTTCCTCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTAGCCTCTTAGCAAGCTaGGCCTCTTTCCTCGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ADCSSMVRSSQHGNHSPSSLLAS*ASFLES Trigger: GGATTCGAGGAAAGAGGCCAAGCTTGCTAAGAGGCT...AGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGAGGAACAATCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS TCA 90 bp | AGGCTGGAAGTGTTCAGCTGCCTCTTGGAATGCTTTGTAATATTCTaGGTCCTCATTCTTGAAGAAGCCAAGGAGCTTGGTCTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLEVFSCLLECFVIF*VLILEEAKELGLVL Trigger: GAGGACCAGACCAAGCTCCTTGGCTTCTTCAAGAATGAGGACTCAGAATATTACAAAGCATTCCAAGAGGCAGCTGAACACTTCCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | CTGCTGGGTTTGGAAAGGCATTCACTGAAATGTACCACTCCTGCCAAGAACAGATTGTTAGGGATGACGTaGGGCTCATCCATAAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLGLERHSLKCTTPAKNRLLGMT*GSSING Trigger: GCCATTTATGGATGAGCCCAACGTCATCCCTAACAA...TCTGTTCTTGGCAGGAGTGGTACATTTCAGTGAATGCCTTTCCAAACCCAGCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | CTGATTGTTCCTCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTGTCTTCTGTGTACGGTTaGTTAGGGATGACGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LIVPQWLEVVSMGITPLLSSVYG*LGMTLG Trigger: GCCCAACGTCATCCCTAACAAACCGTACACAGAAGA...CAGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGAGGAACAATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | GAGCCTGCTGGGTTTGGAAAGGCATTCACTGAAATGTACCACTCCTGCCAAGAAACCCCAATCTGTGGCTaGAACAGGTCAATCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EPAGFGKAFTEMYHSCQETPICG*NRSILK Trigger: TTTCAAGATTGACCTGTTCAAGCCACAGATTGGGGT...TTCTTGGCAGGAGTGGTACATTTCAGTGAATGCCTTTCCAAACCCAGCAGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS TCA 90 bp | AGGATAACTTCTTTGCCACCGCCTTGTCAAAGGTGGCAAAGAACTTaGTGTAAGGCTGGAAGTGTTCAGCTGCCTCTTGGAATGCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RITSLPPPCQRWQRT*CKAGSVQLPLGMLC Trigger: ACAAAGCATTCCAAGAGGCAGCTGAACACTTCCAGCCTTACATCAAGTTCTTTGCCACCTTTGACAAGGCGGTGGCAAAGAAGTTATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS GCA 90 bp | AAAGAACTTGATGTAAGGCTGGAAGTGTTCAGCTGCCTCTTGGAATaGTTTGTAATCCAGCCTCTTAGCAAGCTTGGCCTCTTTCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: KELDVRLEVFSCLLE*FVIQPLSKLGLFPR Trigger: TCGAGGAAAGAGGCCAAGCTTGCTAAGAGGCTGGATTACAAAGCATTCCAAGAGGCAGCTGAACACTTCCAGCCTTACATCAAGTTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164123.2 |
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| CDS CCA 90 bp | CTCGAATCCACCATCACAAAGCCTATGTTTTTATGTTCCAGGACCTaGGCCACAAGCTCCAGTACAATCTCCTTCAGCTGGAACTGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LESTITKPMFLCSRT*ATSSSTISFSWNCF Trigger: AAAACAGTTCCAGCTGAAGGAGATTGTACTGGAGCTTGTGGCCCAGGTCCTGGAACATAAAAACATAGGCTTTGTGATGGTGGATTCGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS CCA 90 bp | CATCCAGATACTGTCAGCATCGGTTACATTCACCACCCCAATCTGTaGCTTGAACAGGTCAATCTTGAAAGTCTTCTCCCAGTAAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HPDTVSIGYIHHPNL*LEQVNLESLLPVSN Trigger: GTTGCTTACTGGGAGAAGACTTTCAAGATTGACCTGTTCAAGCCACAGATTGGGGTGGTGAATGTAACCGATGCTGACAGTATCTGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | CCCACTCATCATCCTAATATTCCAGAAATGATGGCAATGCCCACACATTTCAAGAGCCTCTTAGCAAGCTaGGCCTCTTTCCTCGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: PTHHPNIPEMMAMPTHFKSLLAS*ASFLES Trigger: GGATTCGAGGAAAGAGGCCAAGCTTGCTAAGAGGCT...CTTGAAATGTGTGGGCATTGCCATCATTTCTGGAATATTAGGATGATGAGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | ACTAACACTACCAAGCACACTGTTACTTTCAGACAATTCAAAAGGCACTTGGGGTCAGGATTGTCAGTGTaGTCCCGGGCAACCTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNTTKHTVTFRQFKRHLGSGLSV*SRATCF Trigger: GAAACAGGTTGCCCGGGACAACACTGACAATCCTGA...CCCCAAGTGCCTTTTGAATTGTCTGAAAGTAACAGTGTGCTTGGTAGTGTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS CCA 90 bp | CTTGAAAGTCTTCTCCCAGTAAGCAACAAGCAGTGGAAAGTCATCTaGGTCAATCCACAAGATGCTCAAGTCAGGATTGTCAGTGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LESLLPVSNKQWKVI*VNPQDAQVRIVSVV Trigger: GACAACACTGACAATCCTGACTTGAGCATCTTGTGGATTGACCCAGATGACTTTCCACTGCTTGTTGCTTACTGGGAGAAGACTTTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | GCTGATTGTTCCTCAATGGTTAGAAGTAGTCAGCATGGGAATCACTCCCCTTCTACCCCAATCTGTGGCTaGAACAGGTCAATCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ADCSSMVRSSQHGNHSPSTPICG*NRSILK Trigger: TTTCAAGATTGACCTGTTCAAGCCACAGATTGGGGT...AGAAGGGGAGTGATTCCCATGCTGACTACTTCTAACCATTGAGGAACAATCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | CCCACTCATCATCCTAATATTCCAGAAATGATGGCAATGCCCACACATTTCAAGTTGTTAGGGATGACGTaGGGCTCATCCATAAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PTHHPNIPEMMAMPTHFKLLGMT*GSSING Trigger: GCCATTTATGGATGAGCCCAACGTCATCCCTAACAA...CTTGAAATGTGTGGGCATTGCCATCATTTCTGGAATATTAGGATGATGAGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | ACTAACACTACCAAGCACACTGTTACTTTCAGACAATTCAAAAGGCACTTGGGGCTCTTCAACATCTGCTaGAGGTTCTTCTCAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TNTTKHTVTFRQFKRHLGLFNIC*RFFSER Trigger: CCTTTCTGAGAAGAACCTCAAGCAGATGTTGAAGAG...CCCCAAGTGCCTTTTGAATTGTCTGAAAGTAACAGTGTGCTTGGTAGTGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | ACTAACACTACCAAGCACACTGTTACTTTCAGACAATTCAAAAGGCACTTGGGGGTGTTCAGCTGCCTCTaGGAATGCTTTGTAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: TNTTKHTVTFRQFKRHLGVFSCL*ECFVIF Trigger: GAATATTACAAAGCATTCCAAGAGGCAGCTGAACAC...CCCCAAGTGCCTTTTGAATTGTCTGAAAGTAACAGTGTGCTTGGTAGTGTTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | ATTCCAGAAATGATGGCAATGCCCACACATTTCAAGGCATTTCTAATTGACATCTCAAGGATAACTTCTTaGCCACCGCCTTGTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPEMMAMPTHFKAFLIDISRITS*PPPCQR Trigger: CCTTTGACAAGGCGGTGGCAAAGAAGTTATCCTTGA...GATGTCAATTAGAAATGCCTTGAAATGTGTGGGCATTGCCATCATTTCTGGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | AGTCTAATGTCCATTAGTTTATTACTATTCCATAAAAGGACTGCCCCAGTTTCAATGCTCAAGTCAGGATaGTCAGTGTTGTCCCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLMSISLLLFHKRTAPVSMLKSG*SVLSRA Trigger: TGCCCGGGACAACACTGACAATCCTGACTTGAGCAT...TGAAACTGGGGCAGTCCTTTTATGGAATAGTAATAAACTAATGGACATTAGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS TCA 90 bp | CATCACCATCATCATCTTCATCTTCATTGTCATCATCTTCAGTGTTaGTCTTTCCAGAAAGCACATCTTCAATCCAGTCTTCCAGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HHHHHLHLHCHHLQC*SFQKAHLQSSLPAP Trigger: AGGAGCTGGAAGACTGGATTGAAGATGTGCTTTCTGGAAAGATCAACACTGAAGATGATGACAATGAAGATGAAGATGATGATGGTGATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | CCCACTCATCATCCTAATATTCCAGAAATGATGGCAATGCCCACACATTTCAAGTCATCATCTTCAGTGTaGATCTTTCCAGAAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PTHHPNIPEMMAMPTHFKSSSSV*IFPEST Trigger: TGTGCTTTCTGGAAAGATCAACACTGAAGATGATGA...CTTGAAATGTGTGGGCATTGCCATCATTTCTGGAATATTAGGATGATGAGTGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | ACTAACACTACCAAGCACACTGTTACTTTCAGACAATTCAAAAGGCACTTGGGGTCATCATCTTCAGTGTaGATCTTTCCAGAAAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TNTTKHTVTFRQFKRHLGSSSSV*IFPEST Trigger: TGTGCTTTCTGGAAAGATCAACACTGAAGATGATGA...CCCCAAGTGCCTTTTGAATTGTCTGAAAGTAACAGTGTGCTTGGTAGTGTTAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS-3UTR CAA 90 bp | ACAACACCACACAGAGTCTTCTCCATGTTAACAGATTTCAAAAATAAGTTAGGACTCTTCAACATCTGCTaGAGGTTCTTCTCAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTPHRVFSMLTDFKNKLGLFNIC*RFFSER Trigger: CCTTTCTGAGAAGAACCTCAAGCAGATGTTGAAGAG...TCCTAACTTATTTTTGAAATCTGTTAACATGGAGAAGACTCTGTGTGGTGTTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS CCA 72 bp | AGGAGCTTGGTCTGGTCCTCGATGCGCTCAAAGGCCTaGACCTCCAGCTTGTTATTCACGATCTCCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSLVWSSMRSKA*TSSLLFTISTG Trigger: CCCAGTGGAGATCGTGAATAACAAGCTGGAGGTCCAGGCCTTTGAGCGCATCGAGGACCAGACCAAGCTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS TCA 72 bp | ATGTCCTCTGGGCGCAAGCGACGTAGGGTGGGTCTTTaGTGTTCCTTCACAAACTCCACAAGCTCCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MSSGRKRRRVGL*CSFTNSTSSSS Trigger: AGAAGAGGAGCTTGTGGAGTTTGTGAAGGAACATCAAAGACCCACCCTACGTCGCTTGCGCCCAGAGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS CCA 72 bp | CCATCTGGGTCACTCTTCTCCGCAAAGGCCACGATGTaGATCCCATTCAAGTCGTCTTCTCCTGTAGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PSGSLFSAKATM*IPFKSSSPVVH Trigger: ATGGACTACAGGAGAAGACGACTTGAATGGGATCCACATCGTGGCCTTTGCGGAGAAGAGTGACCCAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165540.9 |
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| CDS CAA 72 bp | TGGTCCTCGATGCGCTCAAAGGCCTGGACCTCCAGCTaGTTATTCACGATCTCCACTGGGTCTTCAATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WSSMRSKAWTSS*LFTISTGSSMR Trigger: TCTCATTGAAGACCCAGTGGAGATCGTGAATAACAAGCTGGAGGTCCAGGCCTTTGAGCGCATCGAGGACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS CAA 72 bp | TATTCTGAGTCCTCATTCTTGAAGAAGCCAAGGAGCTaGGTCTGGTCCTCGATGCGCTCAAAGGCCTGGACC | + |
|
Preference number: 6 (lower is better) Translates to: YSESSFLKKPRS*VWSSMRSKAWT Trigger: GGTCCAGGCCTTTGAGCGCATCGAGGACCAGACCAAGCTCCTTGGCTTCTTCAAGAATGAGGACTCAGAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS CAA 90 bp | AGCTTGGTCTGGTCCTCGATGCGCTCAAAGGCCTGGACCTCCAGCTaGTTATTCACGATCTCCACTGGGTCTTCAATGAGATCCAAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLVWSSMRSKAWTSS*LFTISTGSSMRSKR Trigger: TCTCTTGGATCTCATTGAAGACCCAGTGGAGATCGTGAATAACAAGCTGGAGGTCCAGGCCTTTGAGCGCATCGAGGACCAGACCAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS CCA 72 bp | CCATCTGGGTCACTCTTCTCCGCAAAGGCCACGATGTaGATCCCATTCAAGTCGTCTTCCCATGTTTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PSGSLFSAKATM*IPFKSSSHVSN Trigger: GTTTGAAACATGGGAAGACGACTTGAATGGGATCCACATCGTGGCCTTTGCGGAGAAGAGTGACCCAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 |
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| CDS GCA 72 bp | GATGTAAGGCTGGAAGTGTTCAGCTGCCTCTTGGAATaGTTTGTAATCCAGCCTCTTAGCAAGCTTGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DVRLEVFSCLLE*FVIQPLSKLGL Trigger: GAGGCCAAGCTTGCTAAGAGGCTGGATTACAAAGCATTCCAAGAGGCAGCTGAACACTTCCAGCCTTACATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164123.2 |
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| CDS CCA 72 bp | TTTCAAACATGTCCTCTGGGCGCAAGCGACGTAGGGTaGGTCTTTGATGTTCCTTCACAAACTCCACAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FQTCPLGASDVG*VFDVPSQTPQA Trigger: AGCTTGTGGAGTTTGTGAAGGAACATCAAAGACCCACCCTACGTCGCTTGCGCCCAGAGGACATGTTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS CAA 72 bp | TCAATCCACAAGATGCTCAAGTCAGGATTGTCAGTGTaGTCCCGGGCAACCTGTTTCAGGATCTCTAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SIHKMLKSGLSV*SRATCFRISRN Trigger: GTTCCTAGAGATCCTGAAACAGGTTGCCCGGGACAACACTGACAATCCTGACTTGAGCATCTTGTGGATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS CAA 72 bp | TTCACAAACTCCACAAGCTCCTCTTCTGTGTACGGTTaGTTAGGGATGACGTTGGGCTCATCCATAAATGGC | + |
|
Preference number: 6 (lower is better) Translates to: FTNSTSSSSVYG*LGMTLGSSING Trigger: GCCATTTATGGATGAGCCCAACGTCATCCCTAACAAACCGTACACAGAAGAGGAGCTTGTGGAGTTTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS CAA 90 bp | ACATACAGGCTTCCTTCTTCACTGAATCCCAGCCTCTTAGCAAGCTaGGCCTCTTTCCTCGAATCCACCATCACAAAGCCTATGTTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TYRLPSSLNPSLLAS*ASFLESTITKPMFL Trigger: TAAAAACATAGGCTTTGTGATGGTGGATTCGAGGAAAGAGGCCAAGCTTGCTAAGAGGCTGGGATTCAGTGAAGAAGGAAGCCTGTATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS CCA 72 bp | CGGTTTGTTAGGGATGACGTTGGGCTCATCCATAAATaGCTCATAGAAGCCAACTTCGTTCATCTTCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RFVRDDVGLIHK*LIEANFVHLQG Trigger: TCCTTGAAGATGAACGAAGTTGGCTTCTATGAGCCATTTATGGATGAGCCCAACGTCATCCCTAACAAACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029454.12 ENSMUST00000164123.2 ENSMUST00000165540.9 |
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| CDS TCA 72 bp | CCAGCTTGTTATTCACGATCTCCACTGGGTCTTCAATaGGATCCAAGAGAAATTCCACTAAGACATCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PACYSRSPLGLQ*DPREIPLRHLL Trigger: CAGCAGATGTCTTAGTGGAATTTCTCTTGGATCTCATTGAAGACCCAGTGGAGATCGTGAATAACAAGCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS CAA 90 bp | TCATCACCATCATCATCTTCATCTTCATTGTCATCATCTTCAGTGTaGATCTTTCCAGAAAGCACATCTTCAATCCAGTCTTCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSSSSSSLSSSSV*IFPESTSSIQSSSS Trigger: GGAGCTGGAAGACTGGATTGAAGATGTGCTTTCTGGAAAGATCAACACTGAAGATGATGACAATGAAGATGAAGATGATGATGGTGATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
||
| CDS CAA 90 bp | TCATCATCGTCATCGTTGTCATCACCATCATCATCTTCATCTTCATaGTCATCATCTTCAGTGTTGATCTTTCCAGAAAGCACATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSLSSPSSSSSS*SSSSVLIFPESTSS Trigger: TGAAGATGTGCTTTCTGGAAAGATCAACACTGAAGATGATGACAATGAAGATGAAGATGATGATGGTGATGACAACGATGACGATGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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| CDS CAA 72 bp | TCATCGTTGTCATCACCATCATCATCTTCATCTTCATaGTCATCATCTTCAGTGTTGATCTTTCCAGAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLSSPSSSSSS*SSSSVLIFPES Trigger: GCTTTCTGGAAAGATCAACACTGAAGATGATGACAATGAAGATGAAGATGATGATGGTGATGACAACGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029454.12 ENSMUST00000165540.9 |
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