Pregenerated sensors for CASP9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028914Ensembl transcript IDs: ENSMUST00000030747.11, ENSMUST00000097805.11, ENSMUST00000153094.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTAACCAAGATCCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTaGCTCCTATCTCGGTCACCTGCTGGGCTCGGGCAGGGACCTTGG | + |
|
Preference number: 1 (lower is better) Translates to: VTKILQTGDLICGDS*LLSRSPAGLGQGPW Trigger: CCAAGGTCCCTGCCCGAGCCCAGCAGGTGACCGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGGATCTTGGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 90 bp | ACTCAGCTGGCACCTGCCATTCTGAACTGTGAGGGGCCTGTGCACTaGTCCACACTTTTAAGACCACTACTCAGAGGCAAGGGCAGGCGG | + |
|
Preference number: 1 (lower is better) Translates to: TQLAPAILNCEGPVH*STLLRPLLRGKGRR Trigger: CCGCCTGCCCTTGCCTCTGAGTAGTGGTCTTAAAAGTGTGGACCAGTGCACAGGCCCCTCACAGTTCAGAATGGCAGGTGCCAGCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR GCA 90 bp | AGGAGACTTGATCTGTGGGGACTCCTGACTCCTATCTCGGTCACCTaGTGGGCTCGGGCAGGGACCTTGGAAGACACAGAGAAAAACGCA | + |
|
Preference number: 1 (lower is better) Translates to: RRLDLWGLLTPISVT*WARAGTLEDTEKNA Trigger: TGCGTTTTTCTCTGTGTCTTCCAAGGTCCCTGCCCGAGCCCAGCAGGTGACCGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 90 bp | AGATGCAGCCCAGATCCAGGTATGCACACTGGGCCAGCTGGACTTTaGGTCTGGAAAGGAGAGATGCATAGACCCCTGTGGTTGATGACC | + |
|
Preference number: 1 (lower is better) Translates to: RCSPDPGMHTGPAGL*VWKGEMHRPLWLMT Trigger: GGTCATCAACCACAGGGGTCTATGCATCTCTCCTTTCCAGACTCAAAGTCCAGCTGGCCCAGTGTGCATACCTGGATCTGGGCTGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 90 bp | CAGTCCCATGACAGGATTATACAACCGCACATGTCAGTAGTACAGTaGCAGAGAAGCCCTGTTCTTGAGAGGCCTGGGAGTCCCAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: QSHDRIIQPHMSVVQ*QRSPVLERPGSPRA Trigger: TGCCCTGGGACTCCCAGGCCTCTCAAGAACAGGGCTTCTCTGCCACTGTACTACTGACATGTGCGGTTGTATAATCCTGTCATGGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 90 bp | CACACTTTTAAGACCACTACTCAGAGGCAAGGGCAGGCGGATCTCTaGGTTCAAGGCCAGTCTTGTCTTCATGGTGAGTTCTGGGACAGC | + |
|
Preference number: 1 (lower is better) Translates to: HTFKTTTQRQGQADL*VQGQSCLHGEFWDS Trigger: GCTGTCCCAGAACTCACCATGAAGACAAGACTGGCCTTGAACTCAGAGATCCGCCTGCCCTTGCCTCTGAGTAGTGGTCTTAAAAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 90 bp | GGCAGTGGGACAAGCTATAATCCTGGTACCCAGGAGGCAGTGGTATaGAGATTTTGTGGTCAGCCTGGGCTACAAAGTAAGACCCTAGCT | + |
|
Preference number: 1 (lower is better) Translates to: GSGTSYNPGTQEAVV*RFCGQPGLQSKTLA Trigger: AGCTAGGGTCTTACTTTGTAGCCCAGGCTGACCACAAAATCTCCATACCACTGCCTCCTGGGTACCAGGATTATAGCTTGTCCCACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 90 bp | GAGCAGCCTGCCCCAGTTCAAAATCCTATCTTAGCAGGACAGTTATaGCCTTGGCCAGCTCCAAGCCATGAGAGCTTCGGAGAGAATAAT | + |
|
Preference number: 1 (lower is better) Translates to: EQPAPVQNPILAGQL*PWPAPSHESFGENN Trigger: ATTATTCTCTCCGAAGCTCTCATGGCTTGGAGCTGGCCAAGGCCATAACTGTCCTGCTAAGATAGGATTTTGAACTGGGGCAGGCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 90 bp | TTTCCTTGTTTAATGAACTCAGCTGGCACCTGCCATTCTGAACTGTaGGGGGCCTGTGCACTGGTCCACACTTTTAAGACCACTACTCAG | + |
|
Preference number: 1 (lower is better) Translates to: FPCLMNSAGTCHSEL*GACALVHTFKTTTQ Trigger: CTGAGTAGTGGTCTTAAAAGTGTGGACCAGTGCACAGGCCCCTCACAGTTCAGAATGGCAGGTGCCAGCTGAGTTCATTAAACAAGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 90 bp | GGAATAAGAGGCAGGAGGATTGTTTTAAGGGCAGCCTGGGCTACATaGGACAGTGTCTCAAACAAAACCAACCAACCAAATGAAGCCAAG | + |
|
Preference number: 1 (lower is better) Translates to: GIRGRRIVLRAAWAT*DSVSNKTNQPNEAK Trigger: CTTGGCTTCATTTGGTTGGTTGGTTTTGTTTGAGACACTGTCTCATGTAGCCCAGGCTGCCCTTAAAACAATCCTCCTGCCTCTTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR GCA 90 bp | AGAGTGTATCACGTAAGAAATGAAGATTCCCCTGGCTTTAACCTTTaGGCCCAATCCACAGAGGCAATCGCTGTCAATTGTATGCTCTGT | + |
|
Preference number: 1 (lower is better) Translates to: RVYHVRNEDSPGFNL*AQSTEAIAVNCMLC Trigger: ACAGAGCATACAATTGACAGCGATTGCCTCTGTGGATTGGGCGCAAAGGTTAAAGCCAGGGGAATCTTCATTTCTTACGTGATACACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 90 bp | AGAATAAATAATGTTCTCAAGGAAGAATTAGCCCTTCTGGTAACTTaGAAGAGATGCAGCCCAGATCCAGGTATGCACACTGGGCCAGCT | + |
|
Preference number: 1 (lower is better) Translates to: RINNVLKEELALLVT*KRCSPDPGMHTGPA Trigger: AGCTGGCCCAGTGTGCATACCTGGATCTGGGCTGCATCTCTTCCAAGTTACCAGAAGGGCTAATTCTTCCTTGAGAACATTATTTATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 90 bp | CCTCAAAACAAACAACAAAGAAACGCCCACAACTGCATGTGTAGATaGTCTGCTCACCATAAGCCATCAACACATTTTCCTTGTTTAATG | + |
|
Preference number: 1 (lower is better) Translates to: PQNKQQRNAHNCMCR*SAHHKPSTHFPCLM Trigger: CATTAAACAAGGAAAATGTGTTGATGGCTTATGGTGAGCAGACCATCTACACATGCAGTTGTGGGCGTTTCTTTGTTGTTTGTTTTGAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 90 bp | GGACAATACAGGCTAAATACAGTCCTATTGCCGAAGATTTATTGTTaGAGAATAAATAATGTTCTCAAGGAAGAATTAGCCCTTCTGGTA | + |
|
Preference number: 1 (lower is better) Translates to: GQYRLNTVLLPKIYC*RINNVLKEELALLV Trigger: TACCAGAAGGGCTAATTCTTCCTTGAGAACATTATTTATTCTTCAACAATAAATCTTCGGCAATAGGACTGTATTTAGCCTGTATTGTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR TCA 90 bp | AACCTCGGGGCCCTGAAAGCAATGCTCTTTCAGGAGGAGATTGGGGCAGTGGGAATCCCTAACCACAGATaGAGGGGCCAGGCAGCATCC | + |
|
Preference number: 2 (lower is better) Translates to: NLGALKAMLFQEEIGAVGIPNHR*RGQAAS Trigger: GGATGCTGCCTGGCCCCTTCATCTGTGGTTAGGGAT...TCCCACTGCCCCAATCTCCTCCTGAAAGAGCATTGCTTTCAGGGCCCCGAGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTGACTCCTATCTCGGTCACCTTAGCAGGACAGTTATaGCCTTGGCCAGCTCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: PSDRRLDLWGLLTPISVTLAGQL*PWPAPS Trigger: GCTTGGAGCTGGCCAAGGCCATAACTGTCCTGCTAA...GGTGACCGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CAA 90 bp | CTCCTGACTCCTATCTCGGTCACCTGCTGGGCTCGGGCAGGGACCTaGGAAGACACAGAGAAAAACGCAGGAAAAATCATGTCTCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LLTPISVTCWARAGT*EDTEKNAGKIMSPL Trigger: CAAAGGAGACATGATTTTTCCTGCGTTTTTCTCTGTGTCTTCCAAGGTCCCTGCCCGAGCCCAGCAGGTGACCGAGATAGGAGTCAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR TCA 90 bp | GCAATCGCTGTCAATTGTATGCTCTGTGCTCACCTGGGCCTTGTGTGCATAGACGGGCCAGCTGGACTTTaGGTCTGGAAAGGAGAGATG | + |
|
Preference number: 2 (lower is better) Translates to: AIAVNCMLCAHLGLVCIDGPAGL*VWKGEM Trigger: CATCTCTCCTTTCCAGACTCAAAGTCCAGCTGGCCC...GTCTATGCACACAAGGCCCAGGTGAGCACAGAGCATACAATTGACAGCGATTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | CCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTGACTCCTATCTCGGTCACCGCCCTTCTGGTAACTTaGAAGAGATGCAGCCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PSDRRLDLWGLLTPISVTALLVT*KRCSPD Trigger: ATCTGGGCTGCATCTCTTCCAAGTTACCAGAAGGGC...GGTGACCGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | CAAGCTATAATCCTGGTACCCAGGAGGCAGTGGTATGGAGATTTTGTGGTCAGCGGACAGTTATGGCCTTaGCCAGCTCCAAGCCATGAG | + |
|
Preference number: 2 (lower is better) Translates to: QAIILVPRRQWYGDFVVSGQLWP*PAPSHE Trigger: CTCATGGCTTGGAGCTGGCCAAGGCCATAACTGTCC...GCTGACCACAAAATCTCCATACCACTGCCTCCTGGGTACCAGGATTATAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR TCA 90 bp | CAAGCTATAATCCTGGTACCCAGGAGGCAGTGGTATGGAGATTTTGTGGTCAGCCATTGCCCTACAACCTaGAAGCTGCTAGGAGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: QAIILVPRRQWYGDFVVSHCPTT*KLLGAC Trigger: ACATGCTCCTAGCAGCTTTCAGGTTGTAGGGCAATG...GCTGACCACAAAATCTCCATACCACTGCCTCCTGGGTACCAGGATTATAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR TCA 90 bp | GCTTATAAAAGGAACACAAGAGTGTATCACGTAAGAAATGAAGATTCCCCTGGCCGGGCCTTCCTGGCCTaGTACCCAAGCAGGATTCCG | + |
|
Preference number: 2 (lower is better) Translates to: AYKRNTRVYHVRNEDSPGRAFLA*YPSRIP Trigger: CGGAATCCTGCTTGGGTATCAGGCCAGGAAGGCCCG...GCCAGGGGAATCTTCATTTCTTACGTGATACACTCTTGTGTTCCTTTTATAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | CTACCATCTAAACTCAAGTGGACTTTCACAAAGCAAAGAGTAGAGGAAACCAGACAGGAGGGGTGCTCCTaGCAGCTGGCAGGTAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LPSKLKWTFTKQRVEETRQEGCS*QLAGRG Trigger: TCCTCTACCTGCCAGCTGCCAGGAGCACCCCTCCTG...TCTGGTTTCCTCTACTCTTTGCTTTGTGAAAGTCCACTTGAGTTTAGATGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | GCAATCGCTGTCAATTGTATGCTCTGTGCTCACCTGGGCCTTGTGTGCATAGACGAAGACATTTTTGGTTaGCAGATCTCAGGAGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: AIAVNCMLCAHLGLVCIDEDIFG*QISGGV Trigger: CACCCCTCCTGAGATCTGCCAACCAAAAATGTCTTC...GTCTATGCACACAAGGCCCAGGTGAGCACAGAGCATACAATTGACAGCGATTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CAA 90 bp | CCTGTATTGGCAGAGATGGTGGTAAAGATGCATAATGGCCAGAACTaGGGAATAAGAGGCAGGAGGATTGTTTTAAGGGCAGCCTGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: PVLAEMVVKMHNGQN*GIRGRRIVLRAAWA Trigger: AGCCCAGGCTGCCCTTAAAACAATCCTCCTGCCTCTTATTCCCAAGTTCTGGCCATTATGCATCTTTACCACCATCTCTGCCAATACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR TCA 90 bp | CTACCATCTAAACTCAAGTGGACTTTCACAAAGCAAAGAGTAGAGGAAACCAGAGAGAAGCCCTGTTCTTaGGAGGCCTGGGAGTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPSKLKWTFTKQRVEETREKPCS*EAWESQ Trigger: CTGGGACTCCCAGGCCTCTCAAGAACAGGGCTTCTC...TCTGGTTTCCTCTACTCTTTGCTTTGTGAAAGTCCACTTGAGTTTAGATGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR GCA 90 bp | GCTTATAAAAGGAACACAAGAGTGTATCACGTAAGAAATGAAGATTCCCCTGGCGCCCAGATCCAGGTATaGACACTGGGCCAGCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: AYKRNTRVYHVRNEDSPGAQIQV*TLGQLD Trigger: GTCCAGCTGGCCCAGTGTGCATACCTGGATCTGGGC...GCCAGGGGAATCTTCATTTCTTACGTGATACACTCTTGTGTTCCTTTTATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | GCTCCTGGCAGCTGGCAGGTAGAGGACAGAGACAGCTTAAAACCCTCTACAATAATGTCAGTAGTACAGTaGCAGAGAAGCCCTGTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: APGSWQVEDRDSLKPSTIMSVVQ*QRSPVL Trigger: AAGAACAGGGCTTCTCTGCCACTGTACTACTGACAT...TATTGTAGAGGGTTTTAAGCTGTCTCTGTCCTCTACCTGCCAGCTGCCAGGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | AGTAATTTAAGAATCACATCCTTGAATGAGTCTGTCTTCTTACCCCGATACCCTCTGGTCACTGCCACCTaGGGACCAGGCTCACTTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SNLRITSLNESVFLPRYPLVTAT*GPGSLS Trigger: GCTAAGTGAGCCTGGTCCCCAGGTGGCAGTGACCAG...AGGGTATCGGGGTAAGAAGACAGACTCATTCAAGGATGTGATTCTTAAATTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR GCA 90 bp | AGTAATTTAAGAATCACATCCTTGAATGAGTCTGTCTTCTTACCCCGATACCCTCCAGCACTTCAGTACTaGCTGGTCACTGCCACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SNLRITSLNESVFLPRYPPALQY*LVTATW Trigger: CCAGGTGGCAGTGACCAGGCAGTACTGAAGTGCTGG...AGGGTATCGGGGTAAGAAGACAGACTCATTCAAGGATGTGATTCTTAAATTACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | GCTTATAAAAGGAACACAAGAGTGTATCACGTAAGAAATGAAGATTCCCCTGGCGCACACTGGGCCAGCTaGACTTTGAGTCTGGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: AYKRNTRVYHVRNEDSPGAHWAS*TLSLER Trigger: CCTTTCCAGACTCAAAGTCCAGCTGGCCCAGTGTGC...GCCAGGGGAATCTTCATTTCTTACGTGATACACTCTTGTGTTCCTTTTATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR TCA 90 bp | AGTAATTTAAGAATCACATCCTTGAATGAGTCTGTCTTCTTACCCCGATACCCTCCCCCAGGGCACATGTaGCAATGTCTGAAGACATTT | + |
|
Preference number: 2 (lower is better) Translates to: SNLRITSLNESVFLPRYPPPGHM*QCLKTF Trigger: AAATGTCTTCAGACATTGTCACATGTGCCCTGGGGG...AGGGTATCGGGGTAAGAAGACAGACTCATTCAAGGATGTGATTCTTAAATTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CCA 90 bp | GCTTATAAAAGGAACACAAGAGTGTATCACGTAAGAAATGAAGATTCCCCTGGCAACTGCATGTGTAGATaGTCTGCTCACCATAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: AYKRNTRVYHVRNEDSPGNCMCR*SAHHKP Trigger: TGGCTTATGGTGAGCAGACCATCTACACATGCAGTT...GCCAGGGGAATCTTCATTTCTTACGTGATACACTCTTGTGTTCCTTTTATAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 72 bp | ATCCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTaGCTCCTATCTCGGTCACCTGCTGGGCTCGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ILQTGDLICGDS*LLSRSPAGLGQ Trigger: CTGCCCGAGCCCAGCAGGTGACCGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR GCA 72 bp | GGGCACATTTTCAAGGAAGTCCCAGCACTTCAGTACTaGCTGGTCACTGCCACCTGGGGACCAGGCTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: GHIFKEVPALQY*LVTATWGPGSL Trigger: AAGTGAGCCTGGTCCCCAGGTGGCAGTGACCAGGCAGTACTGAAGTGCTGGGACTTCCTTGAAAATGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTGGCAGCTGGCAGGTAGAGGACAGAGACAGCTTAAAACCCTCTACAATAGCCAGGCAGCATCCATaGCACTCCGGTCTTCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: APGSWQVEDRDSLKPSTIARQHP*HSGLLP Trigger: CGGAAGAAGACCGGAGTGCAATGGATGCTGCCTGGC...TATTGTAGAGGGTTTTAAGCTGTCTCTGTCCTCTACCTGCCAGCTGCCAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGCTCACTTAGCAAGGAAGACAATGGGAGATTGGGAGACCCCAAACAGCAGAGAGAAGCCCTGTTCTaGAGAGGCCTGGGAGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PGSLSKEDNGRLGDPKQQREALF*RGLGVP Trigger: TGGGACTCCCAGGCCTCTCAAGAACAGGGCTTCTCT...CTGCTGTTTGGGGTCTCCCAATCTCCCATTGTCTTCCTTGCTAAGTGAGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 72 bp | CATGTCAGTAGTACAGTGGCAGAGAAGCCCTGTTCTTaGGAGGCCTGGGAGTCCCAGGGCACAATCCCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: HVSSTVAEKPCS*EAWESQGTIPN Trigger: GTTAGGGATTGTGCCCTGGGACTCCCAGGCCTCTCAAGAACAGGGCTTCTCTGCCACTGTACTACTGACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 72 bp | CCAGATCCAGGTATGCACACTGGGCCAGCTGGACTTTaGGTCTGGAAAGGAGAGATGCATAGACCCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PDPGMHTGPAGL*VWKGEMHRPLW Trigger: CCACAGGGGTCTATGCATCTCTCCTTTCCAGACTCAAAGTCCAGCTGGCCCAGTGTGCATACCTGGATCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 72 bp | TTCCGGGCTAAGACCCTTCTTGACCCCTCTTGGCCCTaGGAGTCACTGAACTCAATGCCCAGTGTTCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: FRAKTLLDPSWP*ESLNSMPSVPA Trigger: AGCTGGAACACTGGGCATTGAGTTCAGTGACTCTCAGGGCCAAGAGGGGTCAAGAAGGGTCTTAGCCCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR GCA 72 bp | GCAGCATCCATTGCACTCCGGTCTTCTTCCGACCACTaGTCCACATTGCCCTACAACCTGAAAGCTGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AASIALRSSSDH*STLPYNLKAAR Trigger: CCTAGCAGCTTTCAGGTTGTAGGGCAATGTGGAGCAGTGGTCGGAAGAAGACCGGAGTGCAATGGATGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 72 bp | CGGGGCCCTGAAAGCAATGCTCTTTCAGGAGGAGATTaGGGCAGTGGGACAAGCTATAATCCTGGTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGPESNALSGGD*GSGTSYNPGTQ Trigger: CTGGGTACCAGGATTATAGCTTGTCCCACTGCCCCAATCTCCTCCTGAAAGAGCATTGCTTTCAGGGCCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 72 bp | AGACCCTTCTTGACCCCTCTTGGCCCTGAGAGTCACTaGACTCAATGCCCAGTGTTCCAGCTAACCTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RPFLTPLGPESH*TQCPVFQLTSS Trigger: AGAGGAGGTTAGCTGGAACACTGGGCATTGAGTTCAGTGACTCTCAGGGCCAAGAGGGGTCAAGAAGGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 72 bp | AGGGCACATGTGACAATGTCTGAAGACATTTTTGGTTaGCAGATCTCAGGAGGGGTGCTCCTGGCAGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RAHVTMSEDIFG*QISGGVLLAAG Trigger: GCCAGCTGCCAGGAGCACCCCTCCTGAGATCTGCCAACCAAAAATGTCTTCAGACATTGTCACATGTGCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 72 bp | ACATTTTCAAGGAAGTCCCAGCACTTCAGTACTGCCTaGTCACTGCCACCTGGGGACCAGGCTCACTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TFSRKSQHFSTA*SLPPGDQAHLA Trigger: TGCTAAGTGAGCCTGGTCCCCAGGTGGCAGTGACCAGGCAGTACTGAAGTGCTGGGACTTCCTTGAAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 72 bp | GCACCTGCCATTCTGAACTGTGAGGGGCCTGTGCACTaGTCCACACTTTTAAGACCACTACTCAGAGGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: APAILNCEGPVH*STLLRPLLRGK Trigger: CTTGCCTCTGAGTAGTGGTCTTAAAAGTGTGGACCAGTGCACAGGCCCCTCACAGTTCAGAATGGCAGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 72 bp | GCCCCAGTTCAAAATCCTATCTTAGCAGGACAGTTATaGCCTTGGCCAGCTCCAAGCCATGAGAGCTTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: APVQNPILAGQL*PWPAPSHESFG Trigger: TCCGAAGCTCTCATGGCTTGGAGCTGGCCAAGGCCATAACTGTCCTGCTAAGATAGGATTTTGAACTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 72 bp | ACATTTTTGGTTGGCAGATCTCAGGAGGGGTGCTCCTaGCAGCTGGCAGGTAGAGGACAGAGACAGCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TFLVGRSQEGCS*QLAGRGQRQLK Trigger: TTTAAGCTGTCTCTGTCCTCTACCTGCCAGCTGCCAGGAGCACCCCTCCTGAGATCTGCCAACCAAAAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 72 bp | TTAATGAACTCAGCTGGCACCTGCCATTCTGAACTGTaGGGGGCCTGTGCACTGGTCCACACTTTTAAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LMNSAGTCHSEL*GACALVHTFKT Trigger: GGTCTTAAAAGTGTGGACCAGTGCACAGGCCCCTCACAGTTCAGAATGGCAGGTGCCAGCTGAGTTCATTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 72 bp | TCCTTGTTTAATGAACTCAGCTGGCACCTGCCATTCTaGACTGTGAGGGGCCTGTGCACTGGTCCACACTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLFNELSWHLPF*TVRGLCTGPHF Trigger: AAAGTGTGGACCAGTGCACAGGCCCCTCACAGTTCAGAATGGCAGGTGCCAGCTGAGTTCATTAAACAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR GCA 72 bp | AAGGAAGAATTAGCCCTTCTGGTAACTTGGAAGAGATaGAGCCCAGATCCAGGTATGCACACTGGGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KEELALLVTWKR*SPDPGMHTGPA Trigger: AGCTGGCCCAGTGTGCATACCTGGATCTGGGCTGCATCTCTTCCAAGTTACCAGAAGGGCTAATTCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR GCA 72 bp | ATCCACAGAGGCAATCGCTGTCAATTGTATGCTCTGTaGTCACCTGGGCCTTGTGTGCATAGACGCCAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: IHRGNRCQLYAL*SPGPCVHRRQN Trigger: GTTTTGGCGTCTATGCACACAAGGCCCAGGTGAGCACAGAGCATACAATTGACAGCGATTGCCTCTGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR GCA 72 bp | GGAGCATGTTTGCATCGCCAAAGGGAAAGAGCAGCCTaGCCCAGTTCAAAATCCTATCTTAGCAGGACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: GACLHRQRERAA*PSSKSYLSRTV Trigger: AACTGTCCTGCTAAGATAGGATTTTGAACTGGGGCAGGCTGCTCTTTCCCTTTGGCGATGCAAACATGCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CAA 90 bp | CAAGATCCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTGACTCCTATCTCGTGTCTGAAGACATTTTaGGTTGGCAGATCTCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QDPSDRRLDLWGLLTPISCLKTF*VGRSQE Trigger: CTCCTGAGATCTGCCAACCAAAAATGTCTTCAGACA...CGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGGATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CAA 90 bp | GCAATCGCTGTCAATTGTATGCTCTGTGCTCACCTGGGCCTTGTGTGCATAGACACAAAGGATCCTGTATaGGCAGAGATGGTGGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: AIAVNCMLCAHLGLVCIDTKDPV*AEMVVK Trigger: CTTTACCACCATCTCTGCCAATACAGGATCCTTTGT...GTCTATGCACACAAGGCCCAGGTGAGCACAGAGCATACAATTGACAGCGATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR TCA 72 bp | GGCAGGAGGATTGTTTTAAGGGCAGCCTGGGCTACATaGGACAGTGTCTCAAACAAAACCAACCAACCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: GRRIVLRAAWAT*DSVSNKTNQPN Trigger: ATTTGGTTGGTTGGTTTTGTTTGAGACACTGTCTCATGTAGCCCAGGCTGCCCTTAAAACAATCCTCCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CAA 90 bp | GCTTATAAAAGGAACACAAGAGTGTATCACGTAAGAAATGAAGATTCCCCTGGCTCTTTCAGGAGGAGATaGGGGCAGTGGGACAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: AYKRNTRVYHVRNEDSPGSFRRR*GQWDKL Trigger: TAGCTTGTCCCACTGCCCCAATCTCCTCCTGAAAGA...GCCAGGGGAATCTTCATTTCTTACGTGATACACTCTTGTGTTCCTTTTATAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 72 bp | AATGTTCTCAAGGAAGAATTAGCCCTTCTGGTAACTTaGAAGAGATGCAGCCCAGATCCAGGTATGCACACT | + |
|
Preference number: 3 (lower is better) Translates to: NVLKEELALLVT*KRCSPDPGMHT Trigger: AGTGTGCATACCTGGATCTGGGCTGCATCTCTTCCAAGTTACCAGAAGGGCTAATTCTTCCTTGAGAACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CAA 90 bp | GCTTATAAAAGGAACACAAGAGTGTATCACGTAAGAAATGAAGATTCCCCTGGCCTGCTAGGAGCATGTTaGCATCGCCAAAGGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: AYKRNTRVYHVRNEDSPGLLGAC*HRQRER Trigger: TCTTTCCCTTTGGCGATGCAAACATGCTCCTAGCAG...GCCAGGGGAATCTTCATTTCTTACGTGATACACTCTTGTGTTCCTTTTATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTAATTTAAGAATCACATCCTTGAATGAGTCTGTCTTCTTACCCCGATACCCTAGCCCTTCTGGTAACTaGGAAGAGATGCAGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SNLRITSLNESVFLPRYPSPSGN*EEMQPR Trigger: TCTGGGCTGCATCTCTTCCAAGTTACCAGAAGGGCT...AGGGTATCGGGGTAAGAAGACAGACTCATTCAAGGATGTGATTCTTAAATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CCA 72 bp | AAACAAGGCTTGGCACATCTACCATCTAAACTCAAGTaGACTTTCACAAAGCAAAGAGTAGAGGAAACCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KQGLAHLPSKLK*TFTKQRVEETR Trigger: TCTGGTTTCCTCTACTCTTTGCTTTGTGAAAGTCCACTTGAGTTTAGATGGTAGATGTGCCAAGCCTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | ACTCAATGCCCAGTGTTCCAGCTAACCTCCTCTCTCTCCTGTGTGTCCTGCAGGACCAGCTGCCTGGCCTaGTCCCGCCGAGACCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQCPVFQLTSSLSCVSCRTSCLA*SRRDPD Trigger: ATCTGGGTCTCGGCGGGATCAGGCCAGGCAGCTGGT...CCTGCAGGACACACAGGAGAGAGAGGAGGTTAGCTGGAACACTGGGCATTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | AACCTCGGGGCCCTGAAAGCAATGCTCTTTCAGGAGGAGATTGGGGCAGTGGGAGGGTCTCAAGGTCTGTaGCCAGCTGCCTGGCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLGALKAMLFQEEIGAVGGSQGL*PAAWPD Trigger: ATCAGGCCAGGCAGCTGGTCACAGACCTTGAGACCC...TCCCACTGCCCCAATCTCCTCCTGAAAGAGCATTGCTTTCAGGGCCCCGAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | CCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTGACTCCTATCTCGGTCACCACCGCTTTGCAAGAGTaGAGCCAGGGTGCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSDRRLDLWGLLTPISVTTALQE*SQGALA Trigger: GGCCAAGGCACCCTGGCTTCACTCTTGCAAAGCGGT...GGTGACCGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | GCACAATCCCTAACCACAGATGAAGGGGCCAGGCAGCATCCATTGCACTCCGGTGCTTGCCGACCGCTTTaGAAGAGTGAAGCCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQSLTTDEGARQHPLHSGACRPL*KSEARV Trigger: CACCCTGGCTTCACTCTTGCAAAGCGGTCGGCAAGC...ACCGGAGTGCAATGGATGCTGCCTGGCCCCTTCATCTGTGGTTAGGGATTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | CCAGGCTCACTTAGCAAGGAAGACAATGGGAGATTGGGAGACCCCAAACAGCAGCTGGCCTGGCAGCCATaGGAGAGGATGACCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGSLSKEDNGRLGDPKQQLAWQP*ERMTTT Trigger: TGTGGTGGTCATCCTCTCTCATGGCTGCCAGGCCAG...CTGCTGTTTGGGGTCTCCCAATCTCCCATTGTCTTCCTTGCTAAGTGAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | ACTCAATGCCCAGTGTTCCAGCTAACCTCCTCTCTCTCCTGTGTGTCCTGCAGGCAGCATTGGCAACCCTaGGAAGGAGGGACTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TQCPVFQLTSSLSCVSCRQHWQP*EGGTAG Trigger: ACCTGCAGTCCCTCCTTCTCAGGGTTGCCAATGCTG...CCTGCAGGACACACAGGAGAGAGAGGAGGTTAGCTGGAACACTGGGCATTGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTCACTTAGCAAGGAAGACAATGGGAGATTGGGAGACCCCAAACAGCAGGGAACTGGAGGTGGCTaGCCTGGCAGCCATGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGSLSKEDNGRLGDPKQQGTGGG*PGSHER Trigger: TCTCTCATGGCTGCCAGGCCAGCCACCTCCAGTTCC...CTGCTGTTTGGGGTCTCCCAATCTCCCATTGTCTTCCTTGCTAAGTGAGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CCA 90 bp | AACCTCGGGGCCCTGAAAGCAATGCTCTTTCAGGAGGAGATTGGGGCAGTGGGAGCCACCTCAAAGCCATaGTCTTTCTGCTCACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: NLGALKAMLFQEEIGAVGATSKP*SFCSPP Trigger: CGGTGGTGAGCAGAAAGACCATGGCTTTGAGGTGGC...TCCCACTGCCCCAATCTCCTCCTGAAAGAGCATTGCTTTCAGGGCCCCGAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CAA 72 bp | TCCCTAACCACAGATGAAGGGGCCAGGCAGCATCCATaGCACTCCGGTCTTCTTCCGACCACTGCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SLTTDEGARQHP*HSGLLPTTAPH Trigger: ATGTGGAGCAGTGGTCGGAAGAAGACCGGAGTGCAATGGATGCTGCCTGGCCCCTTCATCTGTGGTTAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | GCACAATCCCTAACCACAGATGAAGGGGCCAGGCAGCATCCATTGCACTCCGGTGGAACACAGACATCATaGGCTCCGCCAGAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: AQSLTTDEGARQHPLHSGGTQTS*APPEPM Trigger: CATTGGTTCTGGCGGAGCTCATGATGTCTGTGTTCC...ACCGGAGTGCAATGGATGCTGCCTGGCCCCTTCATCTGTGGTTAGGGATTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTGACTCCTATCTCGGTCACCCACTGTCCAAGGTCCTaGCTTGAGAGGAAGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSDRRLDLWGLLTPISVTHCPRS*LERKCR Trigger: CCTGCACTTCCTCTCAAGGCAGGACCTTGGACAGTG...GGTGACCGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | TCCGACCACTGCTCCACATTGCCCTACAACCTGAAAGCTGCTAGGAGCATGTTTCCTCTAAGCAGGAGATaGAGAGAGGAAGGGCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SDHCSTLPYNLKAARSMFPLSRR*REEGPA Trigger: GGCAGGCCCTTCCTCTCTTCATCTCCTGCTTAGAGG...AAACATGCTCCTAGCAGCTTTCAGGTTGTAGGGCAATGTGGAGCAGTGGTCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | CAAGCTATAATCCTGGTACCCAGGAGGCAGTGGTATGGAGATTTTGTGGTCAGCCACCGCAGGCCTGGATaGAGAAGAGCTTGGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAIILVPRRQWYGDFVVSHRRPG*RRAWAS Trigger: GGAAGCCCAAGCTCTTCTTCATCCAGGCCTGCGGTG...GCTGACCACAAAATCTCCATACCACTGCCTCCTGGGTACCAGGATTATAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | CAAGCTATAATCCTGGTACCCAGGAGGCAGTGGTATGGAGATTTTGTGGTCAGCTCCAAGGTCCTGCCTTaGGAGGAAGTGCAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QAIILVPRRQWYGDFVVSSKVLP*EEVQAT Trigger: GGTGGCCTGCACTTCCTCTCAAGGCAGGACCTTGGA...GCTGACCACAAAATCTCCATACCACTGCCTCCTGGGTACCAGGATTATAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTGACTCCTATCTCGGTCACCCCGAGACCCAGATCCTaGCTGCTGAATATCCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSDRRLDLWGLLTPISVTPRPRS*LLNILD Trigger: ATCGAGGATATTCAGCAGGCAGGATCTGGGTCTCGG...GGTGACCGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | AACCTCGGGGCCCTGAAAGCAATGCTCTTTCAGGAGGAGATTGGGGCAGTGGGACGAATCCAGGGTGTATaGCATATCTGCATGTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLGALKAMLFQEEIGAVGRIQGV*HICMSP Trigger: AGGGGACATGCAGATATGGCATACACCCTGGATTCG...TCCCACTGCCCCAATCTCCTCCTGAAAGAGCATTGCTTTCAGGGCCCCGAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | CAAGATCCTTCAGACAGGAGACTTGATCTGTGGGGACTCCTGACTCCTATCTCGCTGAGAAGGAGGGACTaGAGGTCTTCAGAGCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QDPSDRRLDLWGLLTPISLRRRD*RSSERA Trigger: GGCTCGCTCTGAAGACCTGCAGTCCCTCCTTCTCAG...CGAGATAGGAGTCAGGAGTCCCCACAGATCAAGTCTCCTGTCTGAAGGATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CCA 90 bp | GCTCCTGGCAGCTGGCAGGTAGAGGACAGAGACAGCTTAAAACCCTCTACAATAGAAGCCAGGGTGCCTTaGCCTGTGTCCTCTAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: APGSWQVEDRDSLKPSTIEARVP*PVSSKQ Trigger: CTGCTTAGAGGACACAGGCCAAGGCACCCTGGCTTC...TATTGTAGAGGGTTTTAAGCTGTCTCTGTCCTCTACCTGCCAGCTGCCAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CCA 90 bp | GCACAATCCCTAACCACAGATGAAGGGGCCAGGCAGCATCCATTGCACTCCGGTATAGGGGACAGCATCTaGCTCAGAGTCACTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AQSLTTDEGARQHPLHSGIGDSI*LRVTVQ Trigger: TTGGACAGTGACTCTGAGCCAGATGCTGTCCCCTAT...ACCGGAGTGCAATGGATGCTGCCTGGCCCCTTCATCTGTGGTTAGGGATTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | ACTCAATGCCCAGTGTTCCAGCTAACCTCCTCTCTCTCCTGTGTGTCCTGCAGGTATCTGCATGTCCCCTaGTCTTCCCTGGAACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQCPVFQLTSSLSCVSCRYLHVP*SSLEHR Trigger: TCTGTGTTCCAGGGAAGATCAGGGGACATGCAGATA...CCTGCAGGACACACAGGAGAGAGAGGAGGTTAGCTGGAACACTGGGCATTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | TCCGACCACTGCTCCACATTGCCCTACAACCTGAAAGCTGCTAGGAGCATGTTTAGAGTGAAGCCAGGGTaGCTTGGCCTGTGTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SDHCSTLPYNLKAARSMFRVKPG*LGLCPL Trigger: TAGAGGACACAGGCCAAGGCACCCTGGCTTCACTCT...AAACATGCTCCTAGCAGCTTTCAGGTTGTAGGGCAATGTGGAGCAGTGGTCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | CAAGCTATAATCCTGGTACCCAGGAGGCAGTGGTATGGAGATTTTGTGGTCAGCAAGCCATGGTCTTTCTaGTCACCACCGCAGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QAIILVPRRQWYGDFVVSKPWSF*SPPQAW Trigger: CCAGGCCTGCGGTGGTGAGCAGAAAGACCATGGCTT...GCTGACCACAAAATCTCCATACCACTGCCTCCTGGGTACCAGGATTATAGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTCACTTAGCAAGGAAGACAATGGGAGATTGGGAGACCCCAAACAGCAGTACTCTCTGCTCCTTTaGTGTGAGTCCCATTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSLSKEDNGRLGDPKQQYSLLL*CESHWS Trigger: GGACCAATGGGACTCACAGCAAAGGAGCAGAGAGTA...CTGCTGTTTGGGGTCTCCCAATCTCCCATTGTCTTCCTTGCTAAGTGAGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CCA 90 bp | GCAATCGCTGTCAATTGTATGCTCTGTGCTCACCTGGGCCTTGTGTGCATAGACTCCCCTGATCTTCCCTaGAACACAGACATCATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AIAVNCMLCAHLGLVCIDSPDLP*NTDIMS Trigger: GCTCATGATGTCTGTGTTCCAGGGAAGATCAGGGGA...GTCTATGCACACAAGGCCCAGGTGAGCACAGAGCATACAATTGACAGCGATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CCA 90 bp | AACCTCGGGGCCCTGAAAGCAATGCTCTTTCAGGAGGAGATTGGGGCAGTGGGATCACAATTTTCTCAATaGACACGGAGCATCCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: NLGALKAMLFQEEIGAVGSQFSQ*TRSIHL Trigger: CAGATGGATGCTCCGTGTCCATTGAGAAAATTGTGA...TCCCACTGCCCCAATCTCCTCCTGAAAGAGCATTGCTTTCAGGGCCCCGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CAA 72 bp | ATTGCACTCCGGTCTTCTTCCGACCACTGCTCCACATaGCCCTACAACCTGAAAGCTGCTAGGAGCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IALRSSSDHCST*PYNLKAARSMF Trigger: AAACATGCTCCTAGCAGCTTTCAGGTTGTAGGGCAATGTGGAGCAGTGGTCGGAAGAAGACCGGAGTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | AGTAATTTAAGAATCACATCCTTGAATGAGTCTGTCTTCTTACCCCGATACCCTCCAGCACCACTGGGGTaGGGTTTCCCACGGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNLRITSLNESVFLPRYPPAPLG*GFPRQA Trigger: AGCCTGCCGTGGGAAACCTCACCCCAGTGGTGCTGG...AGGGTATCGGGGTAAGAAGACAGACTCATTCAAGGATGTGATTCTTAAATTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CCA 90 bp | AGTAATTTAAGAATCACATCCTTGAATGAGTCTGTCTTCTTACCCCGATACCCTACAGCACCCGGGAACTaGAGGTGGCTGGCCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNLRITSLNESVFLPRYPTAPGN*RWLAWQ Trigger: CTGCCAGGCCAGCCACCTCCAGTTCCCGGGTGCTGT...AGGGTATCGGGGTAAGAAGACAGACTCATTCAAGGATGTGATTCTTAAATTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CCA 90 bp | TCCGACCACTGCTCCACATTGCCCTACAACCTGAAAGCTGCTAGGAGCATGTTTCAAAACCTGGGAAGGTaGAGTAGGACACAAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: SDHCSTLPYNLKAARSMFQNLGR*SRTQGC Trigger: ACATCCTTGTGTCCTACTCCACCTTCCCAGGTTTTG...AAACATGCTCCTAGCAGCTTTCAGGTTGTAGGGCAATGTGGAGCAGTGGTCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | CTACCATCTAAACTCAAGTGGACTTTCACAAAGCAAAGAGTAGAGGAAACCAGAGGGGGTAGGCAAACTTaGCACAGCATCCAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSKLKWTFTKQRVEETRGGRQT*HSIQLV Trigger: GACCAGCTGGATGCTGTGTCAAGTTTGCCTACCCCC...TCTGGTTTCCTCTACTCTTTGCTTTGTGAAAGTCCACTTGAGTTTAGATGGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | AGTAATTTAAGAATCACATCCTTGAATGAGTCTGTCTTCTTACCCCGATACCCTTCTGCTCCTTTGCTGTaGGTCCCATTGGTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNLRITSLNESVFLPRYPSAPLL*VPLVPG Trigger: TCCTGGGACCAATGGGACTCACAGCAAAGGAGCAGA...AGGGTATCGGGGTAAGAAGACAGACTCATTCAAGGATGTGATTCTTAAATTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | CTACCATCTAAACTCAAGTGGACTTTCACAAAGCAAAGAGTAGAGGAAACCAGATGCCTTGAGAGGAAGTaGAGGCCACCTCAAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPSKLKWTFTKQRVEETRCLERK*RPPQSH Trigger: ATGGCTTTGAGGTGGCCTGCACTTCCTCTCAAGGCA...TCTGGTTTCCTCTACTCTTTGCTTTGTGAAAGTCCACTTGAGTTTAGATGGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| 3UTR CAA 72 bp | GCAGAGATGGTGGTAAAGATGCATAATGGCCAGAACTaGGGAATAAGAGGCAGGAGGATTGTTTTAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEMVVKMHNGQN*GIRGRRIVLRA Trigger: TGCCCTTAAAACAATCCTCCTGCCTCTTATTCCCAAGTTCTGGCCATTATGCATCTTTACCACCATCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR TCA 90 bp | AGTAATTTAAGAATCACATCCTTGAATGAGTCTGTCTTCTTACCCCGATACCCTAGCCATGAGAGAGGATaGCCACCACAAAGCAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNLRITSLNESVFLPRYPSHERG*PPQSSP Trigger: TGGACTGCTTTGTGGTGGTCATCCTCTCTCATGGCT...AGGGTATCGGGGTAAGAAGACAGACTCATTCAAGGATGTGATTCTTAAATTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR GCA 90 bp | CTACCATCTAAACTCAAGTGGACTTTCACAAAGCAAAGAGTAGAGGAAACCAGAGGTGTATGCCATATCTaGATGTCCCCTGATCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSKLKWTFTKQRVEETRGVCHI*MSPDLP Trigger: GGGAAGATCAGGGGACATGCAGATATGGCATACACC...TCTGGTTTCCTCTACTCTTTGCTTTGTGAAAGTCCACTTGAGTTTAGATGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS GCA 90 bp | GTGAAGAGCTCTCGACTCAGCAGAGCGTCCCAGAGCTCCGCGACTTaGAGCTCGCTCACTAGGCGCACCCTGCATCGCCGCAGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VKSSRLSRASQSSAT*SSLTRRTLHRRRSC Trigger: GCAGCTCCTGCGGCGATGCAGGGTGCGCCTAGTGAGCGAGCTGCAAGTCGCGGAGCTCTGGGACGCTCTGCTGAGTCGAGAGCTCTTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CCA 90 bp | AGCGCAGCCAGCGGAATCGGTGCTCAAGTTTGTCACGGTCCAAGTTaGAGCCCGTGCGTGTGCCGAGCCCCGAGGAAGGGCAGAAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SAASGIGAQVCHGPS*SPCVCRAPRKGRSS Trigger: TGAACTTCTGCCCTTCCTCGGGGCTCGGCACACGCACGGGCTCCAACTTGGACCGTGACAAACTTGAGCACCGATTCCGCTGGCTGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 90 bp | GTCTGTGACCAGCTGCCTGGCCTGATCCCGCCGAGACCCAGATCCTaGCTGCTGAATATCCTCGATCATGTCGCGCGTGAAGAGCTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: VCDQLPGLIPPRPRS*LLNILDHVAREELS Trigger: CGAGAGCTCTTCACGCGCGACATGATCGAGGATATTCAGCAGGCAGGATCTGGGTCTCGGCGGGATCAGGCCAGGCAGCTGGTCACAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS TCA 90 bp | CAGGCTGTGACGGGTCCAGCTTCACTACTCTCTGCTCCTTTGCTGTaGGTCCCATTGGTCCCAGGACCACAGGCACCAGGTGGTCTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QAVTGPASLLSAPLL*VPLVPGPQAPGGLG Trigger: CCCTAGACCACCTGGTGCCTGTGGTCCTGGGACCAATGGGACTCACAGCAAAGGAGCAGAGAGTAGTGAAGCTGGACCCGTCACAGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS TCA 90 bp | GCCGAGACCCAGATCCTGCCTGAATATCCTCGATCATGTCGCGCGTaGAGAGCTCTCGACTCAGCAGAGCGTCCCAGAGCTCCGCGACTT | + |
|
Preference number: 5 (lower is better) Translates to: AETQILPEYPRSCRA*RALDSAERPRAPRL Trigger: AAGTCGCGGAGCTCTGGGACGCTCTGCTGAGTCGAGAGCTCTTCACGCGCGACATGATCGAGGATATTCAGGCAGGATCTGGGTCTCGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153094.2 |
||
| CDS GCA 90 bp | AGGTTTCCCACGGCAGGCTGTGACGGGTCCAGCTTCACTACTCTCTaGTCCTTTGCTGTGAGTCCCATTGGTCCCAGGACCACAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: RFPTAGCDGSSFTTL*SFAVSPIGPRTTGT Trigger: GGTGCCTGTGGTCCTGGGACCAATGGGACTCACAGCAAAGGAGCAGAGAGTAGTGAAGCTGGACCCGTCACAGCCTGCCGTGGGAAACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 90 bp | AGGTCGTTCTTCACCTCCACCATGAAGCGCAGCCAGCGGAATCGGTaGTCAAGTTTGTCACGGTCCAAGTTGGAGCCCGTGCGTGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RSFFTSTMKRSQRNR*SSLSRSKLEPVRVP Trigger: CGGCACACGCACGGGCTCCAACTTGGACCGTGACAAACTTGAGCACCGATTCCGCTGGCTGCGCTTCATGGTGGAGGTGAAGAACGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 90 bp | GTCTGTGACCAGCTGCCTGGCCTGATCCCGCCGAGACCCAGATCCTaGCTGAATATCCTCGATCATGTCGCGCGTGAAGAGCTCTCGACT | + |
|
Preference number: 5 (lower is better) Translates to: VCDQLPGLIPPRPRS*LNILDHVAREELST Trigger: AGTCGAGAGCTCTTCACGCGCGACATGATCGAGGATATTCAGGCAGGATCTGGGTCTCGGCGGGATCAGGCCAGGCAGCTGGTCACAGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153094.2 |
||
| CDS TCA 90 bp | GAGACCCAGATCCTGCCTGCTGAATATCCTCGATCATGTCGCGCGTaGAGAGCTCTCGACTCAGCAGAGCGTCCCAGAGCTCCGCGACTT | + |
|
Preference number: 5 (lower is better) Translates to: ETQILPAEYPRSCRA*RALDSAERPRAPRL Trigger: AAGTCGCGGAGCTCTGGGACGCTCTGCTGAGTCGAGAGCTCTTCACGCGCGACATGATCGAGGATATTCAGCAGGCAGGATCTGGGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 90 bp | ACCACAGGCACCAGGTGGTCTAGGGGTTTAACAGCCTCTGGATCCTaGTTGGCTGCTTGCCGACCGCTTTGCAAGAGTGAAGCCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TTGTRWSRGLTASGS*LAACRPLCKSEARV Trigger: CACCCTGGCTTCACTCTTGCAAAGCGGTCGGCAAGCAGCCAAGCAGGATCCAGAGGCTGTTAAACCCCTAGACCACCTGGTGCCTGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CCA 90 bp | TTGGCTGCTTGCCGACCGCTTTGCAAGAGTGAAGCCAGGGTGCCTTaGCCTGTGTCCTCTAAGCAGGAGATGAAGAGAGGAAGGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAACRPLCKSEARVP*PVSSKQEMKRGRAC Trigger: GCAGGCCCTTCCTCTCTTCATCTCCTGCTTAGAGGACACAGGCCAAGGCACCCTGGCTTCACTCTTGCAAAGCGGTCGGCAAGCAGCCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CCA 90 bp | ATCATGAGCTCCGCCAGAACCAATGTCCACGGGCCTGGGTGTTTCTaGTCTGAGAACCTCTGGCTTGAGCCGAGCAGGCCAGAGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IMSSARTNVHGPGCF*SENLWLEPSRPELF Trigger: GAAGAGCTCTGGCCTGCTCGGCTCAAGCCAGAGGTTCTCAGACCAGAAACACCCAGGCCCGTGGACATTGGTTCTGGCGGAGCTCATGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAATGCCCAGTGTTCCAGCTAACCTCCTCTCTCTCCTGTGTGTCCTGCAGGCTGAGAACCTCTGGCTaGAGCCGAGCAGGCCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TQCPVFQLTSSLSCVSCRLRTSG*SRAGQS Trigger: GCTCTGGCCTGCTCGGCTCAAGCCAGAGGTTCTCAG...CCTGCAGGACACACAGGAGAGAGAGGAGGTTAGCTGGAACACTGGGCATTGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS GCA 90 bp | GGTTTAACAGCCTCTGGATCCTGCTTGGCTGCTTGCCGACCGCTTTaGAAGAGTGAAGCCAGGGTGCCTTGGCCTGTGTCCTCTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLTASGSCLAACRPL*KSEARVPWPVSSKQ Trigger: CTGCTTAGAGGACACAGGCCAAGGCACCCTGGCTTCACTCTTGCAAAGCGGTCGGCAAGCAGCCAAGCAGGATCCAGAGGCTGTTAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 90 bp | CATCTGGCTCAGAGTCACTGTCCAAGGTCCTGCCTTGAGAGGAAGTaGAGGCCACCTCAAAGCCATGGTCTTTCTGCTCACCACCGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HLAQSHCPRSCLERK*RPPQSHGLSAHHRR Trigger: CCTGCGGTGGTGAGCAGAAAGACCATGGCTTTGAGGTGGCCTGCACTTCCTCTCAAGGCAGGACCTTGGACAGTGACTCTGAGCCAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 90 bp | GCAACCCTGAGAAGGAGGGACTGCAGGTCTTCAGAGCGAGCCCACTaGTCCAGAATGCCATCCAAGGTCTCGATGTACCAGGAGCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: ATLRRRDCRSSERAH*SRMPSKVSMYQEPL Trigger: AAGTGGCTCCTGGTACATCGAGACCTTGGATGGCATTCTGGAGCAGTGGGCTCGCTCTGAAGACCTGCAGTCCCTCCTTCTCAGGGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS GCA 90 bp | GAGGATGACCACCACAAAGCAGTCCAGGGCACGGTGGTTCCGGTGTaGCATCTCCATCAAAGCCGTGACCATTTTCTTGGCAGTCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EDDHHKAVQGTVVPV*HLHQSRDHFLGSQV Trigger: GACCTGACTGCCAAGAAAATGGTCACGGCTTTGATGGAGATGGCACACCGGAACCACCGTGCCCTGGACTGCTTTGTGGTGGTCATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 90 bp | GAAGGAGGGACTGCAGGTCTTCAGAGCGAGCCCACTGCTCCAGAATaGCATCCAAGGTCTCGATGTACCAGGAGCCACTTTTCTTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: EGGTAGLQSEPTAPE*HPRSRCTRSHFSCP Trigger: GGGACAAGAAAAGTGGCTCCTGGTACATCGAGACCTTGGATGGCATTCTGGAGCAGTGGGCTCGCTCTGAAGACCTGCAGTCCCTCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS TCA 90 bp | GAAGGTGGAGTAGGACACAAGGATGTCACTGGGGGTAGGCAAACTTaGCACAGCATCCAGCTGGTCCAAGGGCCTTGGGCCTTCCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: EGGVGHKDVTGGRQT*HSIQLVQGPWAFLI Trigger: TATCAGGAAGGCCCAAGGCCCTTGGACCAGCTGGATGCTGTGTCAAGTTTGCCTACCCCCAGTGACATCCTTGTGTCCTACTCCACCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 90 bp | GAGGCAGTGGCCACAGGGATCCGAATCCAGGGTGTATGCCATATCTaGATGTCCCCTGATCTTCCCTGGAACACAGACATCATGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EAVATGIRIQGVCHI*MSPDLPWNTDIMSS Trigger: GGAGCTCATGATGTCTGTGTTCCAGGGAAGATCAGGGGACATGCAGATATGGCATACACCCTGGATTCGGATCCCTGTGGCCACTGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 90 bp | CCTGATAGGGGACAGCATCTGGCTCAGAGTCACTGTCCAAGGTCCTaGCTTGAGAGGAAGTGCAGGCCACCTCAAAGCCATGGTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PDRGQHLAQSHCPRS*LERKCRPPQSHGLS Trigger: AGAAAGACCATGGCTTTGAGGTGGCCTGCACTTCCTCTCAAGGCAGGACCTTGGACAGTGACTCTGAGCCAGATGCTGTCCCCTATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS-3UTR CAA 90 bp | GCTCCTGGCAGCTGGCAGGTAGAGGACAGAGACAGCTTAAAACCCTCTACAATAGTCCAAGGTCCTGCCTaGAGAGGAAGTGCAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: APGSWQVEDRDSLKPSTIVQGPA*RGSAGH Trigger: GTGGCCTGCACTTCCTCTCAAGGCAGGACCTTGGAC...TATTGTAGAGGGTTTTAAGCTGTCTCTGTCCTCTACCTGCCAGCTGCCAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS CCA 90 bp | CGAATCCAGGGTGTATGCCATATCTGCATGTCCCCTGATCTTCCCTaGAACACAGACATCATGAGCTCCGCCAGAACCAATGTCCACGGG | + |
|
Preference number: 5 (lower is better) Translates to: RIQGVCHICMSPDLP*NTDIMSSARTNVHG Trigger: CCCGTGGACATTGGTTCTGGCGGAGCTCATGATGTCTGTGTTCCAGGGAAGATCAGGGGACATGCAGATATGGCATACACCCTGGATTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS-3UTR CAA 90 bp | GCAATCGCTGTCAATTGTATGCTCTGTGCTCACCTGGGCCTTGTGTGCATAGACTGGATGAAGAAGAGCTaGGGCTTCCCTCCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AIAVNCMLCAHLGLVCIDWMKKS*GFPPRL Trigger: CAGCCTGGGAGGGAAGCCCAAGCTCTTCTTCATCCA...GTCTATGCACACAAGGCCCAGGTGAGCACAGAGCATACAATTGACAGCGATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS TCA 90 bp | CACAGGGATCCGAATCCAGGGTGTATGCCATATCTGCATGTCCCCTaGTCTTCCCTGGAACACAGACATCATGAGCTCCGCCAGAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: HRDPNPGCMPYLHVP*SSLEHRHHELRQNQ Trigger: TTGGTTCTGGCGGAGCTCATGATGTCTGTGTTCCAGGGAAGATCAGGGGACATGCAGATATGGCATACACCCTGGATTCGGATCCCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 90 bp | GTTGATGATGAGGCAGTGGCCACAGGGATCCGAATCCAGGGTGTATaGCATATCTGCATGTCCCCTGATCTTCCCTGGAACACAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: VDDEAVATGIRIQGV*HICMSPDLPWNTDI Trigger: GATGTCTGTGTTCCAGGGAAGATCAGGGGACATGCAGATATGGCATACACCCTGGATTCGGATCCCTGTGGCCACTGCCTCATCATCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CCA 90 bp | AGCCCCGAGGAAGGGCAGAAGTTCACATTGTTGATGATGAGGCAGTaGCCACAGGGATCCGAATCCAGGGTGTATGCCATATCTGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: SPEEGQKFTLLMMRQ*PQGSESRVYAISAC Trigger: ACATGCAGATATGGCATACACCCTGGATTCGGATCCCTGTGGCCACTGCCTCATCATCAACAATGTGAACTTCTGCCCTTCCTCGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS-3UTR CAA 90 bp | GCAATCGCTGTCAATTGTATGCTCTGTGCTCACCTGGGCCTTGTGTGCATAGACGCCGTGACCATTTTCTaGGCAGTCAGGTCGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AIAVNCMLCAHLGLVCIDAVTIF*AVRSFF Trigger: GAAGAACGACCTGACTGCCAAGAAAATGGTCACGGC...GTCTATGCACACAAGGCCCAGGTGAGCACAGAGCATACAATTGACAGCGATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CAA 90 bp | GCAATCGCTGTCAATTGTATGCTCTGTGCTCACCTGGGCCTTGTGTGCATAGACGGGCAGAAGTTCACATaGTTGATGATGAGGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AIAVNCMLCAHLGLVCIDGQKFT*LMMRQW Trigger: CCACTGCCTCATCATCAACAATGTGAACTTCTGCCC...GTCTATGCACACAAGGCCCAGGTGAGCACAGAGCATACAATTGACAGCGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CAA 90 bp | GCTCCTGGCAGCTGGCAGGTAGAGGACAGAGACAGCTTAAAACCCTCTACAATACAGAAGTTCACATTGTaGATGATGAGGCAGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: APGSWQVEDRDSLKPSTIQKFTL*MMRQWP Trigger: TGGCCACTGCCTCATCATCAACAATGTGAACTTCTG...TATTGTAGAGGGTTTTAAGCTGTCTCTGTCCTCTACCTGCCAGCTGCCAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CAA 90 bp | GCTTATAAAAGGAACACAAGAGTGTATCACGTAAGAAATGAAGATTCCCCTGGCGCTGGTCCAAGGGCCTaGGGCCTTCCTGATAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AYKRNTRVYHVRNEDSPGAGPRA*GLPDRG Trigger: TCCCCTATCAGGAAGGCCCAAGGCCCTTGGACCAGC...GCCAGGGGAATCTTCATTTCTTACGTGATACACTCTTGTGTTCCTTTTATAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS-3UTR CAA 90 bp | CAAGCTATAATCCTGGTACCCAGGAGGCAGTGGTATGGAGATTTTGTGGTCAGCCAGGAGCCACTTTTCTaGTCCCTCCAGGAGACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QAIILVPRRQWYGDFVVSQEPLF*SLQETK Trigger: TTTTGTCTCCTGGAGGGACAAGAAAAGTGGCTCCTG...GCTGACCACAAAATCTCCATACCACTGCCTCCTGGGTACCAGGATTATAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS TCA 72 bp | GAGGAAGGGCCTGCCTCCCTCGGGTCTCAAGGTCTGTaGCCAGCTGCCTGGCCTGATCCCGCCGAGACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EEGPASLGSQGL*PAAWPDPAETQ Trigger: CTGGGTCTCGGCGGGATCAGGCCAGGCAGCTGGTCACAGACCTTGAGACCCGAGGGAGGCAGGCCCTTCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 72 bp | TCTCGACTCAGCAGAGCGTCCCAGAGCTCCGCGACTTaGAGCTCGCTCACTAGGCGCACCCTGCATCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SRLSRASQSSAT*SSLTRRTLHRR Trigger: GCGGCGATGCAGGGTGCGCCTAGTGAGCGAGCTGCAAGTCGCGGAGCTCTGGGACGCTCTGCTGAGTCGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CCA 72 bp | GTCCACGGGCCTGGGTGTTTCTGGTCTGAGAACCTCTaGCTTGAGCCGAGCAGGCCAGAGCTCTTCTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VHGPGCFWSENL*LEPSRPELFWP Trigger: GGGCCAGAAGAGCTCTGGCCTGCTCGGCTCAAGCCAGAGGTTCTCAGACCAGAAACACCCAGGCCCGTGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CAA 90 bp | AAGCGCAGCCAGCGGAATCGGTGCTCAAGTTTGTCACGGTCCAAGTaGGAGCCCGTGCGTGTGCCGAGCCCCGAGGAAGGGCAGAAGTTC | + |
|
Preference number: 6 (lower is better) Translates to: KRSQRNRCSSLSRSK*EPVRVPSPEEGQKF Trigger: GAACTTCTGCCCTTCCTCGGGGCTCGGCACACGCACGGGCTCCAACTTGGACCGTGACAAACTTGAGCACCGATTCCGCTGGCTGCGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS CAA 90 bp | TTCACCTCCACCATGAAGCGCAGCCAGCGGAATCGGTGCTCAAGTTaGTCACGGTCCAAGTTGGAGCCCGTGCGTGTGCCGAGCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: FTSTMKRSQRNRCSS*SRSKLEPVRVPSPE Trigger: CTCGGGGCTCGGCACACGCACGGGCTCCAACTTGGACCGTGACAAACTTGAGCACCGATTCCGCTGGCTGCGCTTCATGGTGGAGGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 72 bp | GCCTCTGGATCCTGCTTGGCTGCTTGCCGACCGCTTTaGAAGAGTGAAGCCAGGGTGCCTTGGCCTGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ASGSCLAACRPL*KSEARVPWPVS Trigger: GGACACAGGCCAAGGCACCCTGGCTTCACTCTTGCAAAGCGGTCGGCAAGCAGCCAAGCAGGATCCAGAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CAA 90 bp | GAGCCCGTGCGTGTGCCGAGCCCCGAGGAAGGGCAGAAGTTCACATaGTTGATGATGAGGCAGTGGCCACAGGGATCCGAATCCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: EPVRVPSPEEGQKFT*LMMRQWPQGSESRV Trigger: CACCCTGGATTCGGATCCCTGTGGCCACTGCCTCATCATCAACAATGTGAACTTCTGCCCTTCCTCGGGGCTCGGCACACGCACGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS TCA 72 bp | CAGCACCACTGGGGTGAGGTTTCCCACGGCAGGCTGTaGCGGGTCCAGCTTCACTACTCTCTGCTCCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QHHWGEVSHGRL*RVQLHYSLLLC Trigger: GCAAAGGAGCAGAGAGTAGTGAAGCTGGACCCGTCACAGCCTGCCGTGGGAAACCTCACCCCAGTGGTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 72 bp | CAGCTGCCTGGCCTGATCCCGCCGAGACCCAGATCCTaGCTGCTGAATATCCTCGATCATGTCGCGCGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QLPGLIPPRPRS*LLNILDHVARE Trigger: TTCACGCGCGACATGATCGAGGATATTCAGCAGGCAGGATCTGGGTCTCGGCGGGATCAGGCCAGGCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 72 bp | GGTGCTCAAGTTTGTCACGGTCCAAGTTGGAGCCCGTaGGTGTGCCGAGCCCCGAGGAAGGGCAGAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GAQVCHGPSWSP*VCRAPRKGRSS Trigger: TGAACTTCTGCCCTTCCTCGGGGCTCGGCACACGCACGGGCTCCAACTTGGACCGTGACAAACTTGAGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 72 bp | CAGCTGCCTGGCCTGATCCCGCCGAGACCCAGATCCTaGCTGAATATCCTCGATCATGTCGCGCGTGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QLPGLIPPRPRS*LNILDHVAREE Trigger: CTCTTCACGCGCGACATGATCGAGGATATTCAGGCAGGATCTGGGTCTCGGCGGGATCAGGCCAGGCAGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153094.2 |
||
| CDS GCA 72 bp | GTGTCCTCTAAGCAGGAGATGAAGAGAGGAAGGGCCTaGCTCCCTCGGGTCTCAAGGTCTGTGACCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSSKQEMKRGRA*LPRVSRSVTSC Trigger: GCAGCTGGTCACAGACCTTGAGACCCGAGGGAGGCAGGCCCTTCCTCTCTTCATCTCCTGCTTAGAGGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CCA 72 bp | GAGAGGATGACCACCACAAAGCAGTCCAGGGCACGGTaGTTCCGGTGTGCCATCTCCATCAAAGCCGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: ERMTTTKQSRAR*FRCAISIKAVT Trigger: GGTCACGGCTTTGATGGAGATGGCACACCGGAACCACCGTGCCCTGGACTGCTTTGTGGTGGTCATCCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS CAA 90 bp | CCCGTGCGTGTGCCGAGCCCCGAGGAAGGGCAGAAGTTCACATTGTaGATGATGAGGCAGTGGCCACAGGGATCCGAATCCAGGGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PVRVPSPEEGQKFTL*MMRQWPQGSESRVY Trigger: ATACACCCTGGATTCGGATCCCTGTGGCCACTGCCTCATCATCAACAATGTGAACTTCTGCCCTTCCTCGGGGCTCGGCACACGCACGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS TCA 72 bp | ACGGGTCCAGCTTCACTACTCTCTGCTCCTTTGCTGTaGGTCCCATTGGTCCCAGGACCACAGGCACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TGPASLLSAPLL*VPLVPGPQAPG Trigger: ACCTGGTGCCTGTGGTCCTGGGACCAATGGGACTCACAGCAAAGGAGCAGAGAGTAGTGAAGCTGGACCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS TCA 72 bp | GTAGGACACAAGGATGTCACTGGGGGTAGGCAAACTTaGCACAGCATCCAGCTGGTCCAAGGGCCTTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGHKDVTGGRQT*HSIQLVQGPWA Trigger: GGCCCAAGGCCCTTGGACCAGCTGGATGCTGTGTCAAGTTTGCCTACCCCCAGTGACATCCTTGTGTCCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 72 bp | CAAGTTTGTCACGGTCCAAGTTGGAGCCCGTGCGTGTaGCGAGCCCCGAGGAAGGGCAGAAGTTCACATTGT | + |
|
Preference number: 6 (lower is better) Translates to: QVCHGPSWSPCV*RAPRKGRSSHC Trigger: ACAATGTGAACTTCTGCCCTTCCTCGGGGCTCGGCACACGCACGGGCTCCAACTTGGACCGTGACAAACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 72 bp | TTCACCTCCACCATGAAGCGCAGCCAGCGGAATCGGTaGTCAAGTTTGTCACGGTCCAAGTTGGAGCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: FTSTMKRSQRNR*SSLSRSKLEPV Trigger: CACGGGCTCCAACTTGGACCGTGACAAACTTGAGCACCGATTCCGCTGGCTGCGCTTCATGGTGGAGGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS CCA 72 bp | GTGAGTCCCATTGGTCCCAGGACCACAGGCACCAGGTaGTCTAGGGGTTTAACAGCCTCTGGATCCTGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSPIGPRTTGTR*SRGLTASGSCL Trigger: CAAGCAGGATCCAGAGGCTGTTAAACCCCTAGACCACCTGGTGCCTGTGGTCCTGGGACCAATGGGACTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CCA 72 bp | CAAGGGCCTTGGGCCTTCCTGATAGGGGACAGCATCTaGCTCAGAGTCACTGTCCAAGGTCCTGCCTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QGPWAFLIGDSI*LRVTVQGPALR Trigger: TCTCAAGGCAGGACCTTGGACAGTGACTCTGAGCCAGATGCTGTCCCCTATCAGGAAGGCCCAAGGCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS TCA 72 bp | ATCCTGCCTGCTGAATATCCTCGATCATGTCGCGCGTaGAGAGCTCTCGACTCAGCAGAGCGTCCCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ILPAEYPRSCRA*RALDSAERPRA Trigger: AGCTCTGGGACGCTCTGCTGAGTCGAGAGCTCTTCACGCGCGACATGATCGAGGATATTCAGCAGGCAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS TCA 72 bp | GCATCTGGCTCAGAGTCACTGTCCAAGGTCCTGCCTTaGGAGGAAGTGCAGGCCACCTCAAAGCCATGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASGSESLSKVLP*EEVQATSKPWS Trigger: AGACCATGGCTTTGAGGTGGCCTGCACTTCCTCTCAAGGCAGGACCTTGGACAGTGACTCTGAGCCAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS TCA 72 bp | CAGATCCTGCCTGAATATCCTCGATCATGTCGCGCGTaGAGAGCTCTCGACTCAGCAGAGCGTCCCAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QILPEYPRSCRA*RALDSAERPRA Trigger: AGCTCTGGGACGCTCTGCTGAGTCGAGAGCTCTTCACGCGCGACATGATCGAGGATATTCAGGCAGGATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153094.2 |
||
| CDS GCA 72 bp | GAGGCAGTGGCCACAGGGATCCGAATCCAGGGTGTATaGCATATCTGCATGTCCCCTGATCTTCCCTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: EAVATGIRIQGV*HICMSPDLPWN Trigger: GTTCCAGGGAAGATCAGGGGACATGCAGATATGGCATACACCCTGGATTCGGATCCCTGTGGCCACTGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 72 bp | GGACAGCATCTGGCTCAGAGTCACTGTCCAAGGTCCTaGCTTGAGAGGAAGTGCAGGCCACCTCAAAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GQHLAQSHCPRS*LERKCRPPQSH Trigger: ATGGCTTTGAGGTGGCCTGCACTTCCTCTCAAGGCAGGACCTTGGACAGTGACTCTGAGCCAGATGCTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 72 bp | AGAAGGAGGGACTGCAGGTCTTCAGAGCGAGCCCACTaGTCCAGAATGCCATCCAAGGTCTCGATGTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RRRDCRSSERAH*SRMPSKVSMYQ Trigger: CTGGTACATCGAGACCTTGGATGGCATTCTGGAGCAGTGGGCTCGCTCTGAAGACCTGCAGTCCCTCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS CCA 72 bp | TGCCGACCGCTTTGCAAGAGTGAAGCCAGGGTGCCTTaGCCTGTGTCCTCTAAGCAGGAGATGAAGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CRPLCKSEARVP*PVSSKQEMKRG Trigger: TCCTCTCTTCATCTCCTGCTTAGAGGACACAGGCCAAGGCACCCTGGCTTCACTCTTGCAAAGCGGTCGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS CAA 72 bp | AGGTGGTCTAGGGGTTTAACAGCCTCTGGATCCTGCTaGGCTGCTTGCCGACCGCTTTGCAAGAGTGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RWSRGLTASGSC*AACRPLCKSEA Trigger: GGCTTCACTCTTGCAAAGCGGTCGGCAAGCAGCCAAGCAGGATCCAGAGGCTGTTAAACCCCTAGACCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 72 bp | ACCAGGTGGTCTAGGGGTTTAACAGCCTCTGGATCCTaGTTGGCTGCTTGCCGACCGCTTTGCAAGAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TRWSRGLTASGS*LAACRPLCKSE Trigger: TTCACTCTTGCAAAGCGGTCGGCAAGCAGCCAAGCAGGATCCAGAGGCTGTTAAACCCCTAGACCACCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS GCA 72 bp | CAGAGTCACTGTCCAAGGTCCTGCCTTGAGAGGAAGTaGAGGCCACCTCAAAGCCATGGTCTTTCTGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QSHCPRSCLERK*RPPQSHGLSAH Trigger: GTGAGCAGAAAGACCATGGCTTTGAGGTGGCCTGCACTTCCTCTCAAGGCAGGACCTTGGACAGTGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS GCA 72 bp | ACTGCAGGTCTTCAGAGCGAGCCCACTGCTCCAGAATaGCATCCAAGGTCTCGATGTACCAGGAGCCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: TAGLQSEPTAPE*HPRSRCTRSHF Trigger: AAAGTGGCTCCTGGTACATCGAGACCTTGGATGGCATTCTGGAGCAGTGGGCTCGCTCTGAAGACCTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030747.11 |
||
| CDS TCA 72 bp | CCGAATCCAGGGTGTATGCCATATCTGCATGTCCCCTaGTCTTCCCTGGAACACAGACATCATGAGCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PNPGCMPYLHVP*SSLEHRHHELR Trigger: GCGGAGCTCATGATGTCTGTGTTCCAGGGAAGATCAGGGGACATGCAGATATGGCATACACCCTGGATTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||
| CDS TCA 72 bp | CACGGTGGTTCCGGTGTGCCATCTCCATCAAAGCCGTaGCCATTTTCTTGGCAGTCAGGTCGTTCTTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: HGGSGVPSPSKP*PFSWQSGRSSP Trigger: AGGTGAAGAACGACCTGACTGCCAAGAAAATGGTCACGGCTTTGATGGAGATGGCACACCGGAACCACCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS TCA 72 bp | TTTTCTTGGCAGTCAGGTCGTTCTTCACCTCCACCATaGAGCGCAGCCAGCGGAATCGGTGCTCAAGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSWQSGRSSPPP*SAASGIGAQVC Trigger: ACAAACTTGAGCACCGATTCCGCTGGCTGCGCTTCATGGTGGAGGTGAAGAACGACCTGACTGCCAAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 |
||
| CDS CCA 72 bp | GAAGGGCAGAAGTTCACATTGTTGATGATGAGGCAGTaGCCACAGGGATCCGAATCCAGGGTGTATGCCATA | + |
|
Preference number: 6 (lower is better) Translates to: EGQKFTLLMMRQ*PQGSESRVYAI Trigger: TATGGCATACACCCTGGATTCGGATCCCTGTGGCCACTGCCTCATCATCAACAATGTGAACTTCTGCCCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030747.11 ENSMUST00000097805.11 ENSMUST00000153094.2 |
||