Pregenerated sensors for CASP8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026029Ensembl transcript IDs: ENSMUST00000027189.15, ENSMUST00000165549.8, ENSMUST00000190213.2, ENSMUST00000191201.7
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTCAAGACAAGCTTTCTCTGTGTAGCCCTGGCTATCTCAGAACTTaGTATGTAGAGCAGGTTGGCTTTGAACTCAGAGATCCTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: FQDKLSLCSPGYLRT*YVEQVGFELRDPPA Trigger: GGCAGGAGGATCTCTGAGTTCAAAGCCAACCTGCTCTACATAGCAAGTTCTGAGATAGCCAGGGCTACACAGAGAAAGCTTGTCTTGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| 3UTR CAA 90 bp | TGTCTCCAGAGTGCTGAGATTAAAGGTGAACCCATGGAAGCCAATTaGTATTGCCCAACTATTCTTGGGAGAGGGACCTGCCTTGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: CLQSAEIKGEPMEAN*YCPTILGRGTCLGV Trigger: CACTCCAAGGCAGGTCCCTCTCCCAAGAATAGTTGGGCAATACAAATTGGCTTCCATGGGTTCACCTTTAATCTCAGCACTCTGGAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTGAGATTAAAGGTGAACCCATGGAAGCCAATTTGTATTGCCCAACTATTGAGAGGGACCTGCCTTaGAGTGTGATTGGCCTACCA | + |
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Preference number: 2 (lower is better) Translates to: SAEIKGEPMEANLYCPTIERDLP*SVIGLP Trigger: TGGTAGGCCAATCACACTCCAAGGCAGGTCCCTCTC...AATAGTTGGGCAATACAAATTGGCTTCCATGGGTTCACCTTTAATCTCAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTTCTCTGTGTAGCCCTGGCTATCTCAGAACTTGCTATGTAGAGCAGGTTTTAAAGGTGAACCCATaGAAGCCAATTTGTATTGCC | + |
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Preference number: 2 (lower is better) Translates to: KLSLCSPGYLRTCYVEQVLKVNP*KPICIA Trigger: GGCAATACAAATTGGCTTCCATGGGTTCACCTTTAA...AACCTGCTCTACATAGCAAGTTCTGAGATAGCCAGGGCTACACAGAGAAAGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| 3UTR GCA 72 bp | CACCCCATTCTGCTGACTCACCTTCAGCAGTTAACTTaGCCCAGGTCCCTGCTCCCGTCATTCACCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: HPILLTHLQQLT*PRSLLPSFTPS Trigger: AGAGGGGGTGAATGACGGGAGCAGGGACCTGGGGCAAGTTAACTGCTGAAGGTGAGTCAGCAGAATGGGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| 3UTR CCA 72 bp | GTATTGCCCAACTATTCTTGGGAGAGGGACCTGCCTTaGAGTGTGATTGGCCTACCAAAGGTCGCTCCATTT | + |
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Preference number: 3 (lower is better) Translates to: VLPNYSWERDLP*SVIGLPKVAPF Trigger: AAATGGAGCGACCTTTGGTAGGCCAATCACACTCCAAGGCAGGTCCCTCTCCCAAGAATAGTTGGGCAATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| 3UTR TCA 72 bp | CTATCTCAGAACTTGCTATGTAGAGCAGGTTGGCTTTaGACTCAGAGATCCTCCTGCCTCTGTCTCCAGAGT | + |
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Preference number: 3 (lower is better) Translates to: LSQNLLCRAGWL*TQRSSCLCLQS Trigger: ACTCTGGAGACAGAGGCAGGAGGATCTCTGAGTTCAAAGCCAACCTGCTCTACATAGCAAGTTCTGAGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| 3UTR CCA 72 bp | TCTGTCTCCAGAGTGCTGAGATTAAAGGTGAACCCATaGAAGCCAATTTGTATTGCCCAACTATTCTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: SVSRVLRLKVNP*KPICIAQLFLG Trigger: TCCCAAGAATAGTTGGGCAATACAAATTGGCTTCCATGGGTTCACCTTTAATCTCAGCACTCTGGAGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | CTCAGAGATCCTCCTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGAACCCACCAGCAGGCTCTTGTTaGCCTGGTCACAGATTGATT | + |
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Preference number: 4 (lower is better) Translates to: LRDPPASVSRVLRLKVNPPAGSC*PGHRLI Trigger: AATCAATCTGTGACCAGGTCAACAAGAGCCTGCTGG...TGGGTTCACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGGAGGATCTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR CCA 90 bp | GATCCTCCTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGAACCCATGGAAGCTCCTGCTTCTTGTGTaGGATGTAGTCCAAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: DPPASVSRVLRLKVNPWKLLLLV*DVVQAQ Trigger: CTGTGCTTGGACTACATCCCACACAAGAAGCAGGAG...CTTCCATGGGTTCACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGGAGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | TTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACCAAGCACAGGAACTTaGGGGCAGCCAGGTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LDSSTQKCTDKPCELWRAPSTGT*GQPGLH Trigger: GTGAAGACCTGGCTGCCCTCAAGTTCCTGTGCTTGG...TGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | CTCAGAGATCCTCCTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGAACCCACATCTCATCCAAAACTaGAGGTGGCAACTCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: LRDPPASVSRVLRLKVNPHLIQN*RWQLFP Trigger: AGGGAAGAGTTGCCACCTTCAGTTTTGGATGAGATG...TGGGTTCACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGGAGGATCTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | CTGACTCACCTTCAGCAGTTAACTTGCCCCAGGTCCCTGCTCCCGTCATTCACCATAGGATACAGCAGATaGAGCAGTCTTTGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LTHLQQLTCPRSLLPSFTIGYSR*SSLCSC Trigger: ACAAGAACAAAGACTGCTTCATCTGCTGTATCCTAT...GGTGAATGACGGGAGCAGGGACCTGGGGCAAGTTAACTGCTGAAGGTGAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | GATCCTCCTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGAACCCATGGAAGACAGTTCCGCCATTTTaGGGCTCATCTCATCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: DPPASVSRVLRLKVNPWKTVPPF*GSSHPK Trigger: TTTTGGATGAGATGAGCCTCAAAATGGCGGAACTGT...CTTCCATGGGTTCACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGGAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR CCA 90 bp | TCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACATCTCCCACCGACTGATGTaGAAAAGCAGCTCTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSTQKCTDKPCELWRAHISHRLM*KSSSFR Trigger: CCTGAAAGAGCTGCTTTTCCACATCAGTCGGTGGGA...GATGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR CCA 90 bp | ACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACATCCCACCGACTGATGTaGAAAAGCAGCTCTTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: THPHKSAQISHVNCGEHTSHRLM*KSSSFR Trigger: CCTGAAAGAGCTGCTTTTCCACATCAGTCGGTGGGA...TGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | TTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACAGGCTCTGGCAAAGTaGCTGAATATACCAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LDSSTQKCTDKPCELWRAQALAK*LNIPGS Trigger: GGAACCTGGTATATTCAGTCACTTTGCCAGAGCCTG...TGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| 3UTR CAA 72 bp | AGTGCTGAGATTAAAGGTGAACCCATGGAAGCCAATTaGTATTGCCCAACTATTCTTGGGAGAGGGACCTGC | + |
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Preference number: 4 (lower is better) Translates to: SAEIKGEPMEAN*YCPTILGRGTC Trigger: GCAGGTCCCTCTCCCAAGAATAGTTGGGCAATACAAATTGGCTTCCATGGGTTCACCTTTAATCTCAGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | TCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACATCCTTCCTTGGCAAGCCTaGATGAAAAAGATCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SSTQKCTDKPCELWRAHILPWQA*MKKILG Trigger: ACCCAAGATCTTTTTCATTCAGGCTTGCCAAGGAAG...GATGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | AAGCTTTCTCTGTGTAGCCCTGGCTATCTCAGAACTTGCTATGTAGAGCAGGTTCTCTGGCAAAGTGACTaGATATACCAGGTTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: KLSLCSPGYLRTCYVEQVLWQSD*IYQVPF Trigger: GAATGGAACCTGGTATATTCAGTCACTTTGCCAGAG...AACCTGCTCTACATAGCAAGTTCTGAGATAGCCAGGGCTACACAGAGAAAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR CCA 90 bp | TCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACATCTCAGGCACTCCTTTCTaGAAGTTACTTCCTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SSTQKCTDKPCELWRAHISGTPF*KLLPWQ Trigger: TTGCCAAGGAAGTAACTTCCAGAAAGGAGTGCCTGA...GATGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGCTGAGATTAAAGGTGAACCCATGGAAGCCAATTTGTATTGCCCAACTATGTGAAGGTGGGCTGTaGCATCTGCTTTCCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: RVLRLKVNPWKPICIAQLCEGGL*HLLSLV Trigger: AACAAGGGAAAGCAGATGCCACAGCCCACCTTCACA...TAGTTGGGCAATACAAATTGGCTTCCATGGGTTCACCTTTAATCTCAGCACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | AGAAAAGAGGCCATGTATTTGAAATTGGAACATAACAAAGAAGGGTTTAAAGGGCCAAGCACAGGAACTTaGGGGCAGCCAGGTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: RKEAMYLKLEHNKEGFKGPSTGT*GQPGLH Trigger: GTGAAGACCTGGCTGCCCTCAAGTTCCTGTGCTTGG...CCCTTTAAACCCTTCTTTGTTATGTTCCAATTTCAAATACATGGCCTCTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | CAGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGCAGGTCCCACCGACTaGTGTGGAAAAGCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QVIFRNVCVCVCVCMYVCAGPTD*CGKAAL Trigger: AAGAGCTGCTTTTCCACATCAGTCGGTGGGACCTGC...ACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | TTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCAGGCACTTTGAACCAGTaGAGTAAGATGTCAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: LDSSTQKCTDKPCELWRAGTLNQ*SKMSGH Trigger: ATGACCTGACATCTTACTTCACTGGTTCAAAGTGCC...TGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR CCA 90 bp | TTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCATCAGGCACTCCTTTCTaGAAGTTACTTCCTTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: LDSSTQKCTDKPCELWRASGTPF*KLLPWQ Trigger: TTGCCAAGGAAGTAACTTCCAGAAAGGAGTGCCTGA...TGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | CAGTTAATGAGAAAAGAGGCCATGTATTTGAAATTGGAACATAACAAAGAAGGGGCAGGTCCCACCGACTaGTGTGGAAAAGCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QLMRKEAMYLKLEHNKEGAGPTD*CGKAAL Trigger: AAGAGCTGCTTTTCCACATCAGTCGGTGGGACCTGC...CCCTTCTTTGTTATGTTCCAATTTCAAATACATGGCCTCTTTTCTCATTAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR GCA 90 bp | AGAGTGCTGAGATTAAAGGTGAACCCATGGAAGCCAATTTGTATTGCCCAACTATCCCAGCAGAAAGTCTaGCTCATCCGGAATATAGTT | + |
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Preference number: 4 (lower is better) Translates to: RVLRLKVNPWKPICIAQLSQQKV*LIRNIV Trigger: AACTATATTCCGGATGAGGCAGACTTTCTGCTGGGA...TAGTTGGGCAATACAAATTGGCTTCCATGGGTTCACCTTTAATCTCAGCACTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | AATAAATTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGCATCTCATCCAAAACTaGAGGTGGCAACTCTTCCCT | + |
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Preference number: 4 (lower is better) Translates to: NKLDSSTQKCTDKPCELWHLIQN*RWQLFP Trigger: AGGGAAGAGTTGCCACCTTCAGTTTTGGATGAGATG...CCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAATTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | TTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCAATAGGATACAGCAGATaGAGCAGTCTTTGTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LDSSTQKCTDKPCELWRAIGYSR*SSLCSC Trigger: ACAAGAACAAAGACTGCTTCATCTGCTGTATCCTAT...TGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR CCA 90 bp | AGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGCTCCTGCTTCTTGTGTaGGATGTAGTCCAAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: RLYLEMCVCVCVCVCMCVLLLLV*DVVQAQ Trigger: CTGTGCTTGGACTACATCCCACACAAGAAGCAGGAG...CACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR CCA 90 bp | AGAGTGCTGAGATTAAAGGTGAACCCATGGAAGCCAATTTGTATTGCCCAACTACCTTCTAGAATCTCGTaGATTTCATTTGCAGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: RVLRLKVNPWKPICIAQLPSRIS*ISFAVQ Trigger: CTGCACTGCAAATGAAATCCACGAGATTCTAGAAGG...TAGTTGGGCAATACAAATTGGCTTCCATGGGTTCACCTTTAATCTCAGCACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR CCA 90 bp | CAGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTTGTGAAGGTGGGCTGTaGCATCTGCTTTCCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: QVIFRNVCVCVCVCMYVCCEGGL*HLLSLV Trigger: AACAAGGGAAAGCAGATGCCACAGCCCACCTTCACA...ACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | AATAAATTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGGGCACTTTGAACCAGTaGAGTAAGATGTCAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NKLDSSTQKCTDKPCELWGTLNQ*SKMSGH Trigger: ATGACCTGACATCTTACTTCACTGGTTCAAAGTGCC...CCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAATTTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | CAGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTCAGGGAAGGGCACTTTaGACCAGTGAAGTAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: QVIFRNVCVCVCVCMYVCQGRAL*TSEVRC Trigger: ACATCTTACTTCACTGGTTCAAAGTGCCCTTCCCTG...ACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR GCA 90 bp | AGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGTCAGGAAAGACAGATTaGCTTCCTCCAACATCCCCT | + |
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Preference number: 4 (lower is better) Translates to: RLYLEMCVCVCVCVCMCVSGKTD*LPPTSP Trigger: AGGGGATGTTGGAGGAAGGCAATCTGTCTTTCCTGA...CACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR GCA 90 bp | CAGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTTCAGGAAAGACAGATTaGCTTCCTCCAACATCCCCT | + |
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Preference number: 4 (lower is better) Translates to: QVIFRNVCVCVCVCMYVCSGKTD*LPPTSP Trigger: AGGGGATGTTGGAGGAAGGCAATCTGTCTTTCCTGA...ACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR CCA 90 bp | GTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGTAACACCCTTGTCACCGTaGGATAGGATACAGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: VIFRNVCVCVCVCMYVCVTPLSP*DRIQQM Trigger: CATCTGCTGTATCCTATCCCACGGTGACAAGGGTGT...TACACACACATACATACACACACACACACACACACACACATTTCTAAATATAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR CCA 90 bp | AGAAAAGAGGCCATGTATTTGAAATTGGAACATAACAAAGAAGGGTTTAAAGGGACACCCTTGTCACCGTaGGATAGGATACAGCAGATG | + |
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Preference number: 4 (lower is better) Translates to: RKEAMYLKLEHNKEGFKGTPLSP*DRIQQM Trigger: CATCTGCTGTATCCTATCCCACGGTGACAAGGGTGT...CCCTTTAAACCCTTCTTTGTTATGTTCCAATTTCAAATACATGGCCTCTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | AATAAATTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGGCCTTGCTGAAATCATaGTTGTTGATGATCAGACAG | + |
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Preference number: 4 (lower is better) Translates to: NKLDSSTQKCTDKPCELWALLKS*LLMIRQ Trigger: CTGTCTGATCATCAACAATCATGATTTCAGCAAGGC...CCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAATTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | AGATTCATGCTCCAGTCTTGCTTTCTTACTCATGCATCTTCAAGTTTTCTTTTTCAGGGAAGGGCACTTTaGACCAGTGAAGTAAGATGT | + |
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Preference number: 4 (lower is better) Translates to: RFMLQSCFLTHASSSFLFQGRAL*TSEVRC Trigger: ACATCTTACTTCACTGGTTCAAAGTGCCCTTCCCTG...AAAAAGAAAACTTGAAGATGCATGAGTAAGAAAGCAAGACTGGAGCATGAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | AGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGCTTCCTTGGCAAGCCTaGATGAAAAAGATCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RLYLEMCVCVCVCVCMCVLPWQA*MKKILG Trigger: ACCCAAGATCTTTTTCATTCAGGCTTGCCAAGGAAG...CACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | AGAAAAGAGGCCATGTATTTGAAATTGGAACATAACAAAGAAGGGTTTAAAGGGACAGTTCCGCCATTTTaGGGCTCATCTCATCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: RKEAMYLKLEHNKEGFKGTVPPF*GSSHPK Trigger: TTTTGGATGAGATGAGCCTCAAAATGGCGGAACTGT...CCCTTTAAACCCTTCTTTGTTATGTTCCAATTTCAAATACATGGCCTCTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
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| CDS-3UTR TCA 90 bp | AGATTCATGCTCCAGTCTTGCTTTCTTACTCATGCATCTTCAAGTTTTCTTTTTCTTGGCAAGCCTGAATaGAAAAGATCTTGGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RFMLQSCFLTHASSSFLFLGKPE*KRSWVS Trigger: GGAAACCCAAGATCTTTTTCATTCAGGCTTGCCAAG...AAAAAGAAAACTTGAAGATGCATGAGTAAGAAAGCAAGACTGGAGCATGAATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
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| CDS-3UTR TCA 90 bp | AGAAAAGAGGCCATGTATTTGAAATTGGAACATAACAAAGAAGGGTTTAAAGGGCTTGGCAAGCCTGAATaGAAAAGATCTTGGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKEAMYLKLEHNKEGFKGLGKPE*KRSWVS Trigger: GGAAACCCAAGATCTTTTTCATTCAGGCTTGCCAAG...CCCTTTAAACCCTTCTTTGTTATGTTCCAATTTCAAATACATGGCCTCTTTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR TCA 90 bp | GTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGTACTCTGGCAAAGTGACTaGATATACCAGGTTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VIFRNVCVCVCVCMYVCVLWQSD*IYQVPF Trigger: GAATGGAACCTGGTATATTCAGTCACTTTGCCAGAG...TACACACACATACATACACACACACACACACACACACACATTTCTAAATATAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR GCA 90 bp | CAGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTTTCCAAGTTATTTTCTaGCAGCATGGTCCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVIFRNVCVCVCVCMYVCFQVIF*QHGPLL Trigger: GAGAAGAGGACCATGCTGGCAGAAAATAACTTGGAA...ACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGCCTTCTAGAATCTCGTaGATTTCATTTGCAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLYLEMCVCVCVCVCMCVPSRIS*ISFAVQ Trigger: CTGCACTGCAAATGAAATCCACGAGATTCTAGAAGG...CACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGAGGCCATGTATTTGAAATTGGAACATAACAAAGAAGGGTTTAAAGGGGCCTTGCTGAAATCATaGTTGTTGATGATCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RKEAMYLKLEHNKEGFKGALLKS*LLMIRQ Trigger: CTGTCTGATCATCAACAATCATGATTTCAGCAAGGC...CCCTTTAAACCCTTCTTTGTTATGTTCCAATTTCAAATACATGGCCTCTTTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTAATGAGAAAAGAGGCCATGTATTTGAAATTGGAACATAACAAAGAAGGGTTCCAAGTTATTTTCTaGCAGCATGGTCCTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLMRKEAMYLKLEHNKEGFQVIF*QHGPLL Trigger: GAGAAGAGGACCATGCTGGCAGAAAATAACTTGGAA...CCCTTCTTTGTTATGTTCCAATTTCAAATACATGGCCTCTTTTCTCATTAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| 3UTR CAA 72 bp | TTCACCCATTCTGTTAACCAGATTCATGCTCCAGTCTaGCTTTCTTACTCATGCATCTTCAAGTTTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTHSVNQIHAPV*LSYSCIFKFSF Trigger: AAAAGAAAACTTGAAGATGCATGAGTAAGAAAGCAAGACTGGAGCATGAATCTGGTTAACAGAATGGGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
||
| CDS-3UTR CCA 90 bp | AGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGCTTCCAGCTTACATTTaGGGATCTCATTGTTCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLYLEMCVCVCVCVCMCVLPAYI*GSHCSK Trigger: TTTTGAACAATGAGATCCCCAAATGTAAGCTGGAAG...CACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGATCCTCCTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGAACCCATTCCCCAGCAGGCTCTaGTTGACCTGGTCACAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LRDPPASVSRVLRLKVNPFPSRL*LTWSQI Trigger: AATCTGTGACCAGGTCAACAAGAGCCTGCTGGGGAA...TGGGTTCACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGGAGGATCTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
||
| CDS-3UTR CAA 90 bp | ACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACATCCAAGCACAGGAACTaGAGGGCAGCCAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: THPHKSAQISHVNCGEHTSKHRN*RAARSS Trigger: TGAAGACCTGGCTGCCCTCAAGTTCCTGTGCTTGGA...TGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | TCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACATCGGAGAAATCTGGGCATaGTCTGGATCCCGCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSTQKCTDKPCELWRAHIGEIWA*SGSRSS Trigger: AGAGCTGCGGGATCCAGACAATGCCCAGATTTCTCC...GATGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS TCA 90 bp | ACTCACTGTCTTGTTCTCTTGGCGAGTCACACAGTTCCGCCATTTTaGGGCTCATCTCATCCAAAACTGAAGGTGGCAACTCTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: THCLVLLASHTVPPF*GSSHPKLKVATLPF Trigger: GAAGGGAAGAGTTGCCACCTTCAGTTTTGGATGAGATGAGCCTCAAAATGGCGGAACTGTGTGACTCGCCAAGAGAACAAGACAGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS TCA 90 bp | TTCCATAGACGACACCCTTGTCACCGTGGGATAGGATACAGCAGATaGAGCAGTCTTTGTTCTTGTGGTCTGCGCTTTGGTAGCCTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: FHRRHPCHRGIGYSR*SSLCSCGLRFGSLL Trigger: TAGAAGGCTACCAAAGCGCAGACCACAAGAACAAAGACTGCTTCATCTGCTGTATCCTATCCCACGGTGACAAGGGTGTCGTCTATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS-3UTR CAA 90 bp | TTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCATCCAAGCACAGGAACTaGAGGGCAGCCAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LDSSTQKCTDKPCELWRASKHRN*RAARSS Trigger: TGAAGACCTGGCTGCCCTCAAGTTCCTGTGCTTGGA...TGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | ACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACACCCAGCAGGCTCTTGTaGACCTGGTCACAGATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: THPHKSAQISHVNCGEHTPSRLL*TWSQID Trigger: ATCAATCTGTGACCAGGTCAACAAGAGCCTGCTGGG...TGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | TCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACATCCCCAGCAGGCTCTTGTaGACCTGGTCACAGATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSTQKCTDKPCELWRAHIPSRLL*TWSQID Trigger: ATCAATCTGTGACCAGGTCAACAAGAGCCTGCTGGG...GATGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS TCA 90 bp | CATCAGGCACTCCTTTCTGGAAGTTACTTCCTTGGCAAGCCTGAATaGAAAAGATCTTGGGTTTCCCAGACAGGGAAGGGCACTTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HQALLSGSYFLGKPE*KRSWVSQTGKGTLN Trigger: GTTCAAAGTGCCCTTCCCTGTCTGGGAAACCCAAGATCTTTTTCATTCAGGCTTGCCAAGGAAGTAACTTCCAGAAAGGAGTGCCTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS GCA 90 bp | AAGGTGGCAACTCTTCCCTTCCTTCAAGGCTCATTCTTCTCTCTGTaGTTGATCTTTCATAATCCTCGATCTTCCCCAGCAGGCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KVATLPFLQGSFFSL*LIFHNPRSSPAGSC Trigger: ACAAGAGCCTGCTGGGGAAGATCGAGGATTATGAAAGATCAAGCACAGAGAGAAGAATGAGCCTTGAAGGAAGGGAAGAGTTGCCACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS-3UTR CAA 90 bp | AAGCTTTCTCTGTGTAGCCCTGGCTATCTCAGAACTTGCTATGTAGAGCAGGTTGGCATCTGCTTTCCCTaGTTCCTCCTGTCGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KLSLCSPGYLRTCYVEQVGICFP*FLLSSL Trigger: TAAAGACGACAGGAGGAACAAGGGAAAGCAGATGCC...AACCTGCTCTACATAGCAAGTTCTGAGATAGCCAGGGCTACACAGAGAAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
||
| CDS-3UTR CAA 90 bp | ACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACAGGCATCTGCTTTCCCTaGTTCCTCCTGTCGTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: THPHKSAQISHVNCGEHTGICFP*FLLSSL Trigger: TAAAGACGACAGGAGGAACAAGGGAAAGCAGATGCC...TGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGATCCTCCTGCCTCTGTCTCCAGAGTGCTGAGATTAAAGGTGAACCCATTCTTCTCTCTGTGCTaGATCTTTCATAATCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LRDPPASVSRVLRLKVNPFFSLC*IFHNPR Trigger: TCGAGGATTATGAAAGATCAAGCACAGAGAGAAGAA...TGGGTTCACCTTTAATCTCAGCACTCTGGAGACAGAGGCAGGAGGATCTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
||
| CDS-3UTR CAA 90 bp | TTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACAGTTCCGCCATTTaGAGGCTCATCTCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDSSTQKCTDKPCELWRAHSSAI*RLISSK Trigger: TTTGGATGAGATGAGCCTCAAAATGGCGGAACTGTG...TGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | TTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACAGATGAAGCAGTCTTaGTTCTTGTGGTCTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LDSSTQKCTDKPCELWRAQMKQS*FLWSAL Trigger: AAGCGCAGACCACAAGAACAAAGACTGCTTCATCTG...TGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGTTGCAGTCTAGGAAGTaGACCAGCAGGTCCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: RLYLEMCVCVCVCVCMCVLQSRK*TSRSHR Trigger: TCGGTGGGACCTGCTGGTCAACTTCCTAGACTGCAA...CACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS TCA 90 bp | ATTTTTCGGAGTTGGGTTATGTCTTCCCGGGCCTTGCTGAAATCATaGTTGTTGATGATCAGACAGTATCCCCGAGGTTTGTTCTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: IFRSWVMSSRALLKS*LLMIRQYPRGLFFI Trigger: AATGAAGAACAAACCTCGGGGATACTGTCTGATCATCAACAATCATGATTTCAGCAAGGCCCGGGAAGACATAACCCAACTCCGAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
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| CDS-3UTR CAA 90 bp | GTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTGTATTGCAGTCTAGGAAGTaGACCAGCAGGTCCCACCGA | + |
|
Preference number: 5 (lower is better) Translates to: VIFRNVCVCVCVCMYVCVLQSRK*TSRSHR Trigger: TCGGTGGGACCTGCTGGTCAACTTCCTAGACTGCAA...TACACACACATACATACACACACACACACACACACACACATTTCTAAATATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTTTCCCCAGCAGGCTCTaGTTGACCTGGTCACAGATT | + |
|
Preference number: 5 (lower is better) Translates to: QVIFRNVCVCVCVCMYVCFPSRL*LTWSQI Trigger: AATCTGTGACCAGGTCAACAAGAGCCTGCTGGGGAA...ACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | TCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGAGAGCACACATCTTCTTCTCTCTGTGCTaGATCTTTCATAATCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SSTQKCTDKPCELWRAHIFFSLC*IFHNPR Trigger: TCGAGGATTATGAAAGATCAAGCACAGAGAGAAGAA...GATGTGTGCTCTCCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | AATAAATTAGACTCATCCACACAAAAGTGCACAGATAAGCCATGTGAACTGTGGCACAGTTCCGCCATTTaGAGGCTCATCTCATCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: NKLDSSTQKCTDKPCELWHSSAI*RLISSK Trigger: TTTGGATGAGATGAGCCTCAAAATGGCGGAACTGTG...CCACAGTTCACATGGCTTATCTGTGCACTTTTGTGTGGATGAGTCTAATTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | CAGGTTATATTTAGAAATGTGTGTGTGTGTGTGTGTGTGTGTATGTATGTGTGTCAGATGAAGCAGTCTTaGTTCTTGTGGTCTGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVIFRNVCVCVCVCMYVCQMKQS*FLWSAL Trigger: AAGCGCAGACCACAAGAACAAAGACTGCTTCATCTG...ACACACATACATACACACACACACACACACACACACATTTCTAAATATAACCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCTGAGATTAAAGGTGAACCCATGGAAGCCAATTTGTATTGCCCAACTATTCTGGAAGTTACTTCCTaGGCAAGCCTGAATGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SAEIKGEPMEANLYCPTILEVTS*ASLNEK Trigger: TTTTTCATTCAGGCTTGCCAAGGAAGTAACTTCCAG...AATAGTTGGGCAATACAAATTGGCTTCCATGGGTTCACCTTTAATCTCAGCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027189.15 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGAGGCCATGTATTTGAAATTGGAACATAACAAAGAAGGGTTTAAAGGGCTGGAAGTTACTTCCTaGGCAAGCCTGAATGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RKEAMYLKLEHNKEGFKGLEVTS*ASLNEK Trigger: TTTTTCATTCAGGCTTGCCAAGGAAGTAACTTCCAG...CCCTTTAAACCCTTCTTTGTTATGTTCCAATTTCAAATACATGGCCTCTTTTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 |
||
| CDS CAA 90 bp | TGGGCATTGTCTGGATCCCGCAGCTCTCTCACCATCTCCTCTCGGTaGCAGTCTAGGAAGTTGACCAGCAGGTCCCACCGACTGATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WALSGSRSSLTISSR*QSRKLTSRSHRLMW Trigger: CCACATCAGTCGGTGGGACCTGCTGGTCAACTTCCTAGACTGCAACCGAGAGGAGATGGTGAGAGAGCTGCGGGATCCAGACAATGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS CAA 72 bp | TCTGGATCCCGCAGCTCTCTCACCATCTCCTCTCGGTaGCAGTCTAGGAAGTTGACCAGCAGGTCCCACCGA | + |
|
Preference number: 6 (lower is better) Translates to: SGSRSSLTISSR*QSRKLTSRSHR Trigger: TCGGTGGGACCTGCTGGTCAACTTCCTAGACTGCAACCGAGAGGAGATGGTGAGAGAGCTGCGGGATCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS CAA 90 bp | TCCCGCAGCTCTCTCACCATCTCCTCTCGGTTGCAGTCTAGGAAGTaGACCAGCAGGTCCCACCGACTGATGTGGAAAAGCAGCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRSSLTISSRLQSRK*TSRSHRLMWKSSSF Trigger: GAAAGAGCTGCTTTTCCACATCAGTCGGTGGGACCTGCTGGTCAACTTCCTAGACTGCAACCGAGAGGAGATGGTGAGAGAGCTGCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS CCA 72 bp | GAGCATGACCCTGTAGGGAGAAATCTGGGCATTGTCTaGATCCCGCAGCTCTCTCACCATCTCCTCTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: EHDPVGRNLGIV*IPQLSHHLLSV Trigger: AACCGAGAGGAGATGGTGAGAGAGCTGCGGGATCCAGACAATGCCCAGATTTCTCCCTACAGGGTCATGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS TCA 72 bp | GCTTCTTGTGTGGGATGTAGTCCAAGCACAGGAACTTaGGGGCAGCCAGGTCTTCACTGCCCAGTTCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASCVGCSPSTGT*GQPGLHCPVLQ Trigger: CTGAAGAACTGGGCAGTGAAGACCTGGCTGCCCTCAAGTTCCTGTGCTTGGACTACATCCCACACAAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS CCA 72 bp | AACATCCCCTTTTCCCGCAGCCTCAGAAATAGCTTCTaGGCATCCTCGATGGTCTCCTGCTTCTTGTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NIPFSRSLRNSF*ASSMVSCFLCG Trigger: CCCACACAAGAAGCAGGAGACCATCGAGGATGCCCAGAAGCTATTTCTGAGGCTGCGGGAAAAGGGGATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS TCA 72 bp | CGACACCCTTGTCACCGTGGGATAGGATACAGCAGATaGAGCAGTCTTTGTTCTTGTGGTCTGCGCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RHPCHRGIGYSR*SSLCSCGLRFG Trigger: ACCAAAGCGCAGACCACAAGAACAAAGACTGCTTCATCTGCTGTATCCTATCCCACGGTGACAAGGGTGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS GCA 72 bp | AGCTTCTTCCGTAGTGTGAAGGTGGGCTGTGGCATCTaGTTTCCCTTGTTCCTCCTGTCGTCTTTATTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SFFRSVKVGCGI*FPLFLLSSLLL Trigger: GAGCAATAAAGACGACAGGAGGAACAAGGGAAAGCAGATGCCACAGCCCACCTTCACACTACGGAAGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS CAA 90 bp | GACTCACTGTCTTGTTCTCTTGGCGAGTCACACAGTTCCGCCATTTaGAGGCTCATCTCATCCAAAACTGAAGGTGGCAACTCTTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DSLSCSLGESHSSAI*RLISSKTEGGNSSL Trigger: AAGGGAAGAGTTGCCACCTTCAGTTTTGGATGAGATGAGCCTCAAAATGGCGGAACTGTGTGACTCGCCAAGAGAACAAGACAGTGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS TCA 72 bp | CAGTTCCGCCATTTTGAGGCTCATCTCATCCAAAACTaGAGGTGGCAACTCTTCCCTTCCTTCAAGGCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QFRHFEAHLIQN*RWQLFPSFKAH Trigger: ATGAGCCTTGAAGGAAGGGAAGAGTTGCCACCTTCAGTTTTGGATGAGATGAGCCTCAAAATGGCGGAACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS TCA 72 bp | CTTGTTCTCTTGGCGAGTCACACAGTTCCGCCATTTTaGGGCTCATCTCATCCAAAACTGAAGGTGGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LVLLASHTVPPF*GSSHPKLKVAT Trigger: AGTTGCCACCTTCAGTTTTGGATGAGATGAGCCTCAAAATGGCGGAACTGTGTGACTCGCCAAGAGAACAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
||
| CDS TCA 72 bp | TCCTTGAGGACATCTTTCCCTCAGGCTCTGGCAAAGTaGCTGAATATACCAGGTTCCATTCACAGGATCTCG | + |
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Preference number: 6 (lower is better) Translates to: SLRTSFPQALAK*LNIPGSIHRIS Trigger: CGAGATCCTGTGAATGGAACCTGGTATATTCAGTCACTTTGCCAGAGCCTGAGGGAAAGATGTCCTCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
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| CDS CAA 72 bp | TCTTGTTCTCTTGGCGAGTCACACAGTTCCGCCATTTaGAGGCTCATCTCATCCAAAACTGAAGGTGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: SCSLGESHSSAI*RLISSKTEGGN Trigger: GTTGCCACCTTCAGTTTTGGATGAGATGAGCCTCAAAATGGCGGAACTGTGTGACTCGCCAAGAGAACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
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| CDS TCA 72 bp | TTCCCTTCCTTCAAGGCTCATTCTTCTCTCTGTGCTTaGTCTTTCATAATCCTCGATCTTCCCCAGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FPSFKAHSSLCA*SFIILDLPQQA Trigger: AGCCTGCTGGGGAAGATCGAGGATTATGAAAGATCAAGCACAGAGAGAAGAATGAGCCTTGAAGGAAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
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| CDS TCA 72 bp | AGTTGGGTTATGTCTTCCCGGGCCTTGCTGAAATCATaGTTGTTGATGATCAGACAGTATCCCCGAGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SWVMSSRALLKS*LLMIRQYPRGL Trigger: CAAACCTCGGGGATACTGTCTGATCATCAACAATCATGATTTCAGCAAGGCCCGGGAAGACATAACCCAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
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| CDS TCA 72 bp | AAAGATCTTGGGTTTCCCAGACAGGGAAGGGCACTTTaGACCAGTGAAGTAAGATGTCAGGTCATAGATGGA | + |
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Preference number: 6 (lower is better) Translates to: KDLGFPRQGRAL*TSEVRCQVIDG Trigger: TCCATCTATGACCTGACATCTTACTTCACTGGTTCAAAGTGCCCTTCCCTGTCTGGGAAACCCAAGATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
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| CDS CAA 90 bp | TGTGGTCTGCGCTTTGGTAGCCTTCTAGAATCTCGTGGATTTCATTaGCAGTGCAGTCGTCGTAAGATACTATCTCAAAATGAAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: CGLRFGSLLESRGFH*QCSRRKILSQNEAP Trigger: AGGAGCTTCATTTTGAGATAGTATCTTACGACGACTGCACTGCAAATGAAATCCACGAGATTCTAGAAGGCTACCAAAGCGCAGACCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027189.15 ENSMUST00000165549.8 ENSMUST00000190213.2 ENSMUST00000191201.7 |
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