Pregenerated sensors for CASP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025076Ensembl transcript IDs: ENSMUST00000026062.10, ENSMUST00000238892.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGCGCTGGTGGATATGGGCACAGGCCTGGGGAGGCCTTTGGTGTCTaGCTCAGTTCTGGCTTGGTTTCCATCTCAGGCAGTGGCTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: GAGGYGHRPGEAFGV*LSSGLVSISGSGLS Trigger: GGACAAGCCACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCATATCCACCAGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 90 bp | GGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTaGTTTCCATCTCAGGCAGTGGCTTGTCCTGAGCCTGGCTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: GTGLGRPLVSDSVLA*FPSQAVACPEPGSN Trigger: ATTGGAGCCAGGCTCAGGACAAGCCACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 90 bp | ATATGGGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTaGCTTGGTTTCCATCTCAGGCAGTGGCTTGTCCTGAGCCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: IWAQAWGGLWCLTQF*LGFHLRQWLVLSLA Trigger: AGCCAGGCTCAGGACAAGCCACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 90 bp | ATTATAAGGCGCTGGTGGATATGGGCACAGGCCTGGGGAGGCCTTTaGTGTCTGACTCAGTTCTGGCTTGGTTTCCATCTCAGGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: IIRRWWIWAQAWGGL*CLTQFWLGFHLRQW Trigger: CCACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCATATCCACCAGCGCCTTATAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR GCA 90 bp | ATCAAGAGCTGGGATTCTCTTTGCCAAGTTCAACTGAGACGTCATTaGCAATGTCTTCTCCAGAGGTCATGCTCACAGCATGCACTCAGC | + |
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Preference number: 1 (lower is better) Translates to: IKSWDSLCQVQLRRH*QCLLQRSCSQHALS Trigger: GCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCTCTTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR GCA 90 bp | CAGGTGTCGCAGCTGTATTCTTTCATCAAGAGCTGGGATTCTCTTTaGCAAGTTCAACTGAGACGTCATTGCCAATGTCTTCTCCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: QVSQLYSFIKSWDSL*QVQLRRHCQCLLQR Trigger: CCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCTCTTGATGAAAGAATACAGCTGCGACACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 90 bp | AATGGAGGCCAACAGGTGTCGCAGCTGTATTCTTTCATCAAGAGCTaGGATTCTCTTTGCCAAGTTCAACTGAGACGTCATTGCCAATGT | + |
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Preference number: 1 (lower is better) Translates to: NGGQQVSQLYSFIKS*DSLCQVQLRRHCQC Trigger: ACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCTCTTGATGAAAGAATACAGCTGCGACACCTGTTGGCCTCCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CAA 90 bp | AATTATAAGGCGCTGGTGGATATGGGCACAGGCCTGGGGAGGCCTTaGGTGTCTGACTCAGTTCTGGCTTGGTTTCCATCTCAGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: NYKALVDMGTGLGRP*VSDSVLAWFPSQAV Trigger: CACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCATATCCACCAGCGCCTTATAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR GCA 90 bp | GGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTGGTTTCCAAGCTGGGATTCTCTTTaGCAAGTTCAACTGAGACGT | + |
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Preference number: 2 (lower is better) Translates to: GTGLGRPLVSDSVLAWFPSWDSL*QVQLRR Trigger: ACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCT...TGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR TCA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGGGCAGTGGCTTGTCCTaGGCCTGGCTCCAATCACCA | + |
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Preference number: 2 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLGSGLS*AWLQSP Trigger: TGGTGATTGGAGCCAGGCTCAGGACAAGCCACTGCC...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CAA 90 bp | CATCAAGAGCTGGGATTCTCTTTGCCAAGTTCAACTGAGACGTCATaGCCAATGTCTTCTCCAGAGGTCATGCTCACAGCATGCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: HQELGFSLPSSTETS*PMSSPEVMLTACTQ Trigger: CTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCTCTTGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CAA 90 bp | ACAGGTGTCGCAGCTGTATTCTTTCATCAAGAGCTGGGATTCTCTTaGCCAAGTTCAACTGAGACGTCATTGCCAATGTCTTCTCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: TGVAAVFFHQELGFS*PSSTETSLPMSSPE Trigger: CTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCTCTTGATGAAAGAATACAGCTGCGACACCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR GCA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGCTTCTCCAGAGGTCATaGTCACAGCATGCACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLLLQRS*SQHALS Trigger: GCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAG...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR CCA 90 bp | GGACATGGTTATTTAATTCACATTTTGAGCCAAGTTTACCCCCACCACTACCCCGACTCAGTTCTGGCTTaGTTTCCATCTCAGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: GHGYLIHILSQVYPHHYPDSVLA*FPSQAV Trigger: CACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTC...GGGGTAGTGGTGGGGGTAAACTTGGCTCAAAATGTGAATTAAATAACCATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR CCA 90 bp | GGACATGGTTATTTAATTCACATTTTGAGCCAAGTTTACCCCCACCACTACCCCGGCTTTCAGGCACCTTaGAATTATAAGGCGCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GHGYLIHILSQVYPHHYPGFQAP*NYKALV Trigger: CACCAGCGCCTTATAATTCCAAGGTGCCTGAAAGCC...GGGGTAGTGGTGGGGGTAAACTTGGCTCAAAATGTGAATTAAATAACCATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR CCA 90 bp | GGACATGGTTATTTAATTCACATTTTGAGCCAAGTTTACCCCCACCACTACCCCCTTCTCTCAGCCACCTaGGAAGGTCGGCTTAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: GHGYLIHILSQVYPHHYPLLSAT*EGRLKN Trigger: ATTTTTAAGCCGACCTTCCCAGGTGGCTGAGAGAAG...GGGGTAGTGGTGGGGGTAAACTTGGCTCAAAATGTGAATTAAATAACCATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR GCA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGCAACTGAGACGTCATTaGCAATGTCTTCTCCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLQLRRH*QCLLQR Trigger: CCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTG...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR CCA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGGGATGGCTTATTTTCTaGATTGGGTTCTATATACTG | + |
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Preference number: 2 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLGWLIF*IGFYIL Trigger: CAGTATATAGAACCCAATCCAGAAAATAAGCCATCC...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | CAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTaGCTTGGTTTCCATCTCAGGCAGTGGCTTGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: QAWGGLWCLTQF*LGFHLRQWLVL Trigger: CAGGACAAGCCACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR CAA 90 bp | CCAAGTTTACCCCCACCACTACCCCTGCTTTGCTATCCCTTCCTCTGCTCTGTAGGCCTGGGGAGGCCTTaGGTGTCTGACTCAGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: PSLPPPLPLLCYPFLCSVGLGRP*VSDSVL Trigger: CAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCC...TACAGAGCAGAGGAAGGGATAGCAAAGCAGGGGTAGTGGTGGGGGTAAACTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR TCA 72 bp | GGATATGGGCACAGGCCTGGGGAGGCCTTTGGTGTCTaGCTCAGTTCTGGCTTGGTTTCCATCTCAGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: GYGHRPGEAFGV*LSSGLVSISGS Trigger: ACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCATATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | CTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTaGTTTCCATCTCAGGCAGTGGCTTGTCCTGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: LGRPLVSDSVLA*FPSQAVACPEP Trigger: AGGCTCAGGACAAGCCACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | GGAATTATAAGGCGCTGGTGGATATGGGCACAGGCCTaGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTT | + |
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Preference number: 3 (lower is better) Translates to: GIIRRWWIWAQA*GGLWCLTQFWL Trigger: AAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCATATCCACCAGCGCCTTATAATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | TTCAGGCACCTTGGAATTATAAGGCGCTGGTGGATATaGGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACT | + |
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Preference number: 3 (lower is better) Translates to: FRHLGIIRRWWI*AQAWGGLWCLT Trigger: AGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCATATCCACCAGCGCCTTATAATTCCAAGGTGCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | CTGACTCAGTTCTGGCTTGGTTTCCATCTCAGGCAGTaGCTTGTCCTGAGCCTGGCTCCAATCACCATAGTC | + |
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Preference number: 3 (lower is better) Translates to: LTQFWLGFHLRQ*LVLSLAPITIV Trigger: GACTATGGTGATTGGAGCCAGGCTCAGGACAAGCCACTGCCTGAGATGGAAACCAAGCCAGAACTGAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR-3UTR CAA 90 bp | ATGGGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTGGTTTTGTGAGGTAACGGGATaGACTGTCTCTCAATTACCC | + |
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Preference number: 3 (lower is better) Translates to: MGTGLGRPLVSDSVLAWFCEVTG*TVSQLP Trigger: GGGTAATTGAGAGACAGTCAATCCCGTTACCTCACA...AAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR GCA 72 bp | TTCTCTCAGCCACCTGGGAAGGTCGGCTTAAAAATCTaGCCTAAGCCACTGAGAACAACCACTCAGCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: FSQPPGKVGLKI*PKPLRTTTQQP Trigger: TGGCTGCTGAGTGGTTGTTCTCAGTGGCTTAGGGCAGATTTTTAAGCCGACCTTCCCAGGTGGCTGAGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR GCA 72 bp | CTGAGACGTCATTGCCAATGTCTTCTCCAGAGGTCATaGTCACAGCATGCACTCAGCGAGACGACAAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: LRRHCQCLLQRS*SQHALSETTKK Trigger: TTTCTTTGTCGTCTCGCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATGACGTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR GCA 72 bp | TGGGATTCTCTTTGCCAAGTTCAACTGAGACGTCATTaGCAATGTCTTCTCCAGAGGTCATGCTCACAGCAT | + |
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Preference number: 3 (lower is better) Translates to: WDSLCQVQLRRH*QCLLQRSCSQH Trigger: ATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | CAACAGGTGTCGCAGCTGTATTCTTTCATCAAGAGCTaGGATTCTCTTTGCCAAGTTCAACTGAGACGTCAT | + |
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Preference number: 3 (lower is better) Translates to: QQVSQLYSFIKS*DSLCQVQLRRH Trigger: ATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCTCTTGATGAAAGAATACAGCTGCGACACCTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR GCA 72 bp | CAGCTGTATTCTTTCATCAAGAGCTGGGATTCTCTTTaGCAAGTTCAACTGAGACGTCATTGCCAATGTCTT | + |
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Preference number: 3 (lower is better) Translates to: QLYSFIKSWDSL*QVQLRRHCQCL Trigger: AAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCTCTTGATGAAAGAATACAGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | CCCTGTATTGACCCTTCTGCACCGATATTCCTAGGATaGCTTATTTTCTGGATTGGGTTCTATATACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: PCIDPSAPIFLG*LIFWIGFYILE Trigger: TTCCAGTATATAGAACCCAATCCAGAAAATAAGCCATCCTAGGAATATCGGTGCAGAAGGGTCAATACAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | TGCACCGATATTCCTAGGATGGCTTATTTTCTGGATTaGGTTCTATATACTGGAATATTAACTGTCGTCTTC | + |
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Preference number: 3 (lower is better) Translates to: CTDIPRMAYFLD*VLYTGILTVVF Trigger: GAAGACGACAGTTAATATTCCAGTATATAGAACCCAATCCAGAAAATAAGCCATCCTAGGAATATCGGTGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CCA 72 bp | ATAGTGAATGAATACATTGTAGCACGCCAGAGGACATaGTTATTTAATTCACATTTTGAGCCAAGTTTACCC | + |
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Preference number: 3 (lower is better) Translates to: IVNEYIVARQRT*LFNSHFEPSLP Trigger: GGGTAAACTTGGCTCAAAATGTGAATTAAATAACCATGTCCTCTGGCGTGCTACAATGTATTCATTCACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR TCA 72 bp | TATTTGAAGTACAAAAACATTATCTTGTATACAAAGTaGAATGGGTTACTCTTCAGCACCTGTGTGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: YLKYKNIILYTK*NGLLFSTCVDG Trigger: TCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACAAGATAATGTTTTTGTACTTCAAATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | GGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTGGTTTCCAAGGTCCTCTTCCCCGTaGCTCAGCAGGACGCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: GTGLGRPLVSDSVLAWFPRSSSP*LSRTQA Trigger: CGCCTGCGTCCTGCTGAGCCACGGGGAAGAGGACCT...TGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | GGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTGGTTTCCATGCGGTACAGATAAGTaGGCACTCGGTCCCGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GTGLGRPLVSDSVLAWFPCGTDK*ALGPGR Trigger: CCGGCCGGGACCGAGTGCCCACTTATCTGTACCGCA...TGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | GGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTGGTTTCCAAGGAGCGGTCTGGCTTaGCGTCAACTCCGTCTTCGC | + |
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Preference number: 4 (lower is better) Translates to: GTGLGRPLVSDSVLAWFPRSGLA*RQLRLR Trigger: GCGAAGACGGAGTTGACGCCAAGCCAGACCGCTCCT...TGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | ATGGGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTGGTTTGGCCCCGAGTCAGCCTaGATTCCATCATCGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MGTGLGRPLVSDSVLAWFGPESA*IPSSSS Trigger: GGAGCTCGATGATGGAATCCAGGCTGACTCGGGGCC...AAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | CATTGCCAATGTCTTCTCCAGAGGTCATGCTCACAGCATGCACTCAGCGAGACGCGTGGATCATCAGACTaGGACTCGAAGTGCCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: HCQCLLQRSCSQHALSETRGSSD*DSKCLA Trigger: GGCCAGGCACTTCGAGTCCCAGTCTGATGATCCACG...CGTCTCGCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR GCA 90 bp | CATTGCCAATGTCTTCTCCAGAGGTCATGCTCACAGCATGCACTCAGCGAGACGATGGAGCAGAGGGCCTaGACAAACCAGGAGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: HCQCLLQRSCSQHALSETMEQRA*TNQEPF Trigger: GAAAGGCTCCTGGTTTGTGCAGGCCCTCTGCTCCAT...CGTCTCGCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | CATTGCCAATGTCTTCTCCAGAGGTCATGCTCACAGCATGCACTCAGCGAGACGCAGGCCGAGTTGCTGTaGTCCTCCTCAGAGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: HCQCLLQRSCSQHALSETQAELL*SSSEAF Trigger: AAAAGCCTCTGAGGAGGACCACAGCAACTCGGCCTG...CGTCTCGCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | ATGGGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTGGTTTCTTCTCGTTGAAGCGTaGATCATCAGACTGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: MGTGLGRPLVSDSVLAWFLLVEA*IIRLGL Trigger: GAGTCCCAGTCTGATGATCCACGCTTCAACGAGAAG...AAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CAA 72 bp | CCTAAGCCACTGAGAACAACCACTCAGCAGCCACCTTaGCCAATGGAGGCCAACAGGTGTCGCAGCTGTATT | + |
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Preference number: 4 (lower is better) Translates to: PKPLRTTTQQPP*PMEANRCRSCI Trigger: AATACAGCTGCGACACCTGTTGGCCTCCATTGGCAAAGGTGGCTGCTGAGTGGTTGTTCTCAGTGGCTTAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR GCA 90 bp | CCAAGTTTACCCCCACCACTACCCCTGCTTTGCTATCCCTTCCTCTGCTCTGTATCGAGGTCCTTGCCATaGTCATTCAGGATGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PSLPPPLPLLCYPFLCSVSRSLP*SFRMEQ Trigger: CTGCTCCATCCTGAATGAGCATGGCAAGGACCTCGA...TACAGAGCAGAGGAAGGGATAGCAAAGCAGGGGTAGTGGTGGGGGTAAACTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | GCCACTGAGAACAACCACTCAGCAGCCACCTTTGCCAATGGAGGCCAACAGGTGTCAAAACCCAGGTTTTaGAAGCACTTGAAGAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ATENNHSAATFANGGQQVSKPRF*KHLKRA Trigger: GGCCCTCTTCAAGTGCTTCCAAAACCTGGGTTTTGA...CACCTGTTGGCCTCCATTGGCAAAGGTGGCTGCTGAGTGGTTGTTCTCAGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | CATTGCCAATGTCTTCTCCAGAGGTCATGCTCACAGCATGCACTCAGCGAGACGCATGCTCATTCAGGATaGAGCAGAGGGCCTGCACAA | + |
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Preference number: 4 (lower is better) Translates to: HCQCLLQRSCSQHALSETHAHSG*SRGPAQ Trigger: TTGTGCAGGCCCTCTGCTCCATCCTGAATGAGCATG...CGTCTCGCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR GCA 90 bp | GCCACTGAGAACAACCACTCAGCAGCCACCTTTGCCAATGGAGGCCAACAGGTGTCTTCTGGAAATCCATaGGGTACAGATAAGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: ATENNHSAATFANGGQQVSSGNP*GTDKWA Trigger: TGCCCACTTATCTGTACCGCATGGATTTCCAGAAGA...CACCTGTTGGCCTCCATTGGCAAAGGTGGCTGCTGAGTGGTTGTTCTCAGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR TCA 90 bp | CATTGCCAATGTCTTCTCCAGAGGTCATGCTCACAGCATGCACTCAGCGAGACGCGGTCTCCCCTAAAATaGGCTGTCAGATCCTTTATG | + |
|
Preference number: 4 (lower is better) Translates to: HCQCLLQRSCSQHALSETRSPLK*AVRSFM Trigger: CATAAAGGATCTGACAGCTCATTTTAGGGGAGACCG...CGTCTCGCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | GCCACTGAGAACAACCACTCAGCAGCCACCTTTGCCAATGGAGGCCAACAGGTGAATAACCTGGAACCGTaGAGTAAGCAAAGAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ATENNHSAATFANGGQQVNNLEP*SKQRGS Trigger: ACTTCCTCTTTGCTTACTCCACGGTTCCAGGTTATT...CACCTGTTGGCCTCCATTGGCAAAGGTGGCTGCTGAGTGGTTGTTCTCAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR TCA 90 bp | TCTTTGCCAAGTTCAACTGAGACGTCATTGCCAATGTCTTCTCCAGAGGTCATGGTCCCTCGGCATGCCTaGATGAAGAAGAGTTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSSTETSLPMSSPEVMVPRHA*MKKSLG Trigger: ACCCAAACTCTTCTTCATTCAGGCATGCCGAGGGAC...CATGACCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR TCA 90 bp | TCTTTGCCAAGTTCAACTGAGACGTCATTGCCAATGTCTTCTCCAGAGGTCATGTGGTCAGGATCTGCATaGTCTCGAGGTCCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLPSSTETSLPMSSPEVMWSGSA*SRGPCH Trigger: ATGGCAAGGACCTCGAGATCATGCAGATCCTGACCA...CATGACCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CAA 72 bp | CTGGGATTCTCTTTGCCAAGTTCAACTGAGACGTCATaGCCAATGTCTTCTCCAGAGGTCATGCTCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGFSLPSSTETS*PMSSPEVMLTA Trigger: TGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR GCA 90 bp | CCAAGTTTACCCCCACCACTACCCCTGCTTTGCTATCCCTTCCTCTGCTCTGTATTTCTAAGCAGATCTTaGATCTTTGCACAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSLPPPLPLLCYPFLCSVFLSRS*IFAQEQ Trigger: CTGCTCTTGTGCAAAGATGCAAGATCTGCTTAGAAA...TACAGAGCAGAGGAAGGGATAGCAAAGCAGGGGTAGTGGTGGGGGTAAACTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR GCA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGCTTGAAGAGGGCCCCTaGATCTTTGTCCGTCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLLEEGP*IFVRPI Trigger: AATGGGACGGACAAAGATGCAGGGGCCCTCTTCAAG...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR GCA 90 bp | GGACATGGTTATTTAATTCACATTTTGAGCCAAGTTTACCCCCACCACTACCCCCTCCGTCCCTCGGCATaGCTGAATGAAGAAGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHGYLIHILSQVYPHHYPLRPSA*LNEEEF Trigger: AAACTCTTCTTCATTCAGGCATGCCGAGGGACGGAG...GGGGTAGTGGTGGGGGTAAACTTGGCTCAAAATGTGAATTAAATAACCATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR TCA 90 bp | GGACATGGTTATTTAATTCACATTTTGAGCCAAGTTTACCCCCACCACTACCCCCTCGGCATGCCTGAATaGAGAAGAGTTTGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHGYLIHILSQVYPHHYPLGMPE*RRVWVS Trigger: AGAAACCCAAACTCTTCTTCATTCAGGCATGCCGAG...GGGGTAGTGGTGGGGGTAAACTTGGCTCAAAATGTGAATTAAATAACCATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
||
| CDS-3UTR TCA 90 bp | GGACATGGTTATTTAATTCACATTTTGAGCCAAGTTTACCCCCACCACTACCCCTCTGCTTCTTCTCGTTaGAGCGTGGATCATCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GHGYLIHILSQVYPHHYPSASSR*SVDHQT Trigger: AGTCTGATGATCCACGCTTCAACGAGAAGAAGCAGA...GGGGTAGTGGTGGGGGTAAACTTGGCTCAAAATGTGAATTAAATAACCATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
||
| CDS-3UTR CCA 90 bp | TCTTTGCCAAGTTCAACTGAGACGTCATTGCCAATGTCTTCTCCAGAGGTCATGCAAGAGCAGTCATTGTaGACGGTTACTTCAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSSTETSLPMSSPEVMQEQSL*TVTSKP Trigger: GGGTTTTGAAGTAACCGTCCACAATGACTGCTCTTG...CATGACCTCTGGAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CAA 72 bp | GCAGCTGTATTCTTTCATCAAGAGCTGGGATTCTCTTaGCCAAGTTCAACTGAGACGTCATTGCCAATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAVFFHQELGFS*PSSTETSLPMS Trigger: AGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCTCTTGATGAAAGAATACAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR GCA 90 bp | GGACATGGTTATTTAATTCACATTTTGAGCCAAGTTTACCCCCACCACTACCCCCAGATCTTGCATCTTTaGACAAGAGCAGTCATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHGYLIHILSQVYPHHYPQILHL*TRAVIV Trigger: CACAATGACTGCTCTTGTGCAAAGATGCAAGATCTG...GGGGTAGTGGTGGGGGTAAACTTGGCTCAAAATGTGAATTAAATAACCATGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CCA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGCATTTACCCATCTTCTaGAAATCCATGCGGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLHLPIF*KSMRYR Trigger: TCTGTACCGCATGGATTTCCAGAAGATGGGTAAATG...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| 3UTR CAA 72 bp | TACCTTGGAAAGAAACTGCTAAGATCTTCGCCTAAATaGTCATTTGTAGAACCAGAGGTAACCAAAGATTAT | + |
|
Preference number: 4 (lower is better) Translates to: YLGKKLLRSSPK*SFVEPEVTKDY Trigger: ATAATCTTTGGTTACCTCTGGTTCTACAAATGACAATTTAGGCGAAGATCTTAGCAGTTTCTTTCCAAGGTA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS TCA 90 bp | AATCCATGCGGTACAGATAAGTGGGCACTCGGTCCCGGCCGGTCCTaGCGGGGCCCGCAGAGGCATTTCTCTTCTTCTTCCTGGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: NPCGTDKWALGPGRS*RGPQRHFSSSSWCP Trigger: GGGACACCAGGAAGAAGAAGAGAAATGCCTCTGCGGGCCCCGTCAGGACCGGCCGGGACCGAGTGCCCACTTATCTGTACCGCATGGATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238892.2 |
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| CDS-3UTR CAA 90 bp | GCCACTGAGAACAACCACTCAGCAGCCACCTTTGCCAATGGAGGCCAACAGGTGGCGAAGCAGGCCGAGTaGCTGTGGTCCTCCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ATENNHSAATFANGGQQVAKQAE*LWSSSE Trigger: CTCTGAGGAGGACCACAGCAACTCGGCCTGCTTCGC...CACCTGTTGGCCTCCATTGGCAAAGGTGGCTGCTGAGTGGTTGTTCTCAGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | GGCACAGGCCTGGGGAGGCCTTTGGTGTCTGACTCAGTTCTGGCTTGGTTTCCATTAGCGTCAATGTCGTaGATGGGCCCCGAGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGLGRPLVSDSVLAWFPLASMS*MGPESA Trigger: GGCTGACTCGGGGCCCATCAACGACATTGACGCTAA...TGGAAACCAAGCCAGAACTGAGTCAGACACCAAAGGCCTCCCCAGGCCTGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS GCA 90 bp | GACTCGAAGTGCCTGGCCACCCTGTCGTTCACCCTGGTCAGGATCTaGATGATCTCGAGGTCCTTGCCATGCTCATTCAGGATGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DSKCLATLSFTLVRI*MISRSLPCSFRMEQ Trigger: CTGCTCCATCCTGAATGAGCATGGCAAGGACCTCGAGATCATGCAGATCCTGACCAGGGTGAACGACAGGGTGGCCAGGCACTTCGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS CCA 90 bp | ATACACGGGATCTGCTTCTTCTCGTTGAAGCGTGGATCATCAGACTaGGACTCGAAGTGCCTGGCCACCCTGTCGTTCACCCTGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IHGICFFSLKRGSSD*DSKCLATLSFTLVR Trigger: CCTGACCAGGGTGAACGACAGGGTGGCCAGGCACTTCGAGTCCCAGTCTGATGATCCACGCTTCAACGAGAAGAAGCAGATCCCGTGTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS GCA 90 bp | TGCTTCTTCTCGTTGAAGCGTGGATCATCAGACTGGGACTCGAAGTaGCTGGCCACCCTGTCGTTCACCCTGGTCAGGATCTGCATGATC | + |
|
Preference number: 5 (lower is better) Translates to: CFFSLKRGSSDWDSK*LATLSFTLVRICMI Trigger: GATCATGCAGATCCTGACCAGGGTGAACGACAGGGTGGCCAGGCACTTCGAGTCCCAGTCTGATGATCCACGCTTCAACGAGAAGAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS CCA 90 bp | GAGCATGGACACCATACACGGGATCTGCTTCTTCTCGTTGAAGCGTaGATCATCAGACTGGGACTCGAAGTGCCTGGCCACCCTGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: EHGHHTRDLLLLVEA*IIRLGLEVPGHPVV Trigger: AACGACAGGGTGGCCAGGCACTTCGAGTCCCAGTCTGATGATCCACGCTTCAACGAGAAGAAGCAGATCCCGTGTATGGTGTCCATGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | CATTGCCAATGTCTTCTCCAGAGGTCATGCTCACAGCATGCACTCAGCGAGACGTCCACCGGGATCTTGTaGCGGGGATTAGCGTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: HCQCLLQRSCSQHALSETSTGIL*RGLASM Trigger: CATTGACGCTAATCCCCGCAACAAGATCCCGGTGGA...CGTCTCGCTGAGTGCATGCTGTGAGCATGACCTCTGGAGAAGACATTGGCAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS CCA 90 bp | AGGAGCCTTTCCCTGGGTTCCTCCATGAGTAATAACCTGGAACCGTaGAGTAAGCAAAGAGGAAGTCGGCTTCCACCGGGATCTTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSLSLGSSMSNNLEP*SKQRGSRLPPGSCC Trigger: GCAACAAGATCCCGGTGGAAGCCGACTTCCTCTTTGCTTACTCCACGGTTCCAGGTTATTACTCATGGAGGAACCCAGGGAAAGGCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | GCCACTGAGAACAACCACTCAGCAGCCACCTTTGCCAATGGAGGCCAACAGGTGCTGAAGTACAGCTCTTaGGTGAGCATGGACACCATA | + |
|
Preference number: 5 (lower is better) Translates to: ATENNHSAATFANGGQQVLKYSS*VSMDTI Trigger: TATGGTGTCCATGCTCACCAAAGAGCTGTACTTCAG...CACCTGTTGGCCTCCATTGGCAAAGGTGGCTGCTGAGTGGTTGTTCTCAGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | CCAAGTTTACCCCCACCACTACCCCTGCTTTGCTATCCCTTCCTCTGCTCTGTATTCTCTAACAGGGTTTaGCATCGGTCTCCCCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: PSLPPPLPLLCYPFLCSVFSNRV*HRSPLK Trigger: TTTTAGGGGAGACCGATGCAAAACCCTGTTAGAGAA...TACAGAGCAGAGGAAGGGATAGCAAAGCAGGGGTAGTGGTGGGGGTAAACTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS GCA 90 bp | GCTGTGGTCCTCCTCAGAGGCTTTTCTAAGCAGATCTTGCATCTTTaGACAAGAGCAGTCATTGTGGACGGTTACTTCAAAACCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: AVVLLRGFSKQILHL*TRAVIVDGYFKTQV Trigger: AACCTGGGTTTTGAAGTAACCGTCCACAATGACTGCTCTTGTGCAAAGATGCAAGATCTGCTTAGAAAAGCCTCTGAGGAGGACCACAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS GCA 90 bp | GCCGAGTTGCTGTGGTCCTCCTCAGAGGCTTTTCTAAGCAGATCTTaGATCTTTGCACAAGAGCAGTCATTGTGGACGGTTACTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: AELLWSSSEAFLSRS*IFAQEQSLWTVTSK Trigger: TTTTGAAGTAACCGTCCACAATGACTGCTCTTGTGCAAAGATGCAAGATCTGCTTAGAAAAGCCTCTGAGGAGGACCACAGCAACTCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS-3UTR CAA 90 bp | CCAAGTTTACCCCCACCACTACCCCTGCTTTGCTATCCCTTCCTCTGCTCTGTATTTTCTAAGCAGATCTaGCATCTTTGCACAAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSLPPPLPLLCYPFLCSVFSKQI*HLCTRA Trigger: TGCTCTTGTGCAAAGATGCAAGATCTGCTTAGAAAA...TACAGAGCAGAGGAAGGGATAGCAAAGCAGGGGTAGTGGTGGGGGTAAACTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | AGCTGGGATTCTCTTTGCCAAGTTCAACTGAGACGTCATTGCCAATGTCTTCTCGCAGATCTTGCATCTTaGCACAAGAGCAGTCATTGT | + |
|
Preference number: 5 (lower is better) Translates to: SWDSLCQVQLRRHCQCLLADLAS*HKSSHC Trigger: ACAATGACTGCTCTTGTGCAAAGATGCAAGATCTGC...GAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGTTCAAAACCCAGGTTTaGGAAGCACTTGAAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLFKTQV*EALEEG Trigger: GCCCTCTTCAAGTGCTTCCAAAACCTGGGTTTTGAA...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGATCTGCTTCTTCTCGTaGAAGCGTGGATCATCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLICFFS*KRGSSD Trigger: GTCTGATGATCCACGCTTCAACGAGAAGAAGCAGAT...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | AGCTGGGATTCTCTTTGCCAAGTTCAACTGAGACGTCATTGCCAATGTCTTCTCGCTTTGTCGAAGTTCTaGTTGTTTATGATGATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SWDSLCQVQLRRHCQCLLALSKF*LFMMMH Trigger: ATGCATCATCATAAACAACAAGAACTTCGACAAAGC...GAGAAGACATTGGCAATGACGTCTCAGTTGAACTTGGCAAAGAGAATCCCAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS-3UTR CAA 90 bp | TGTATACAAAGTGAAATGGGTTACTCTTCAGCACCTGTGTGGATGGATGATCTGTCCATACCTGTCGCTTaGTCGAAGTTCTTGTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: CIQSEMGYSSAPVWMDDLSIPVA*SKFLLF Trigger: AAACAACAAGAACTTCGACAAAGCGACAGGTATGGA...CAGATCATCCATCCACACAGGTGCTGAAGAGTAACCCATTTCACTTTGTATACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS TCA 72 bp | GGTACAGATAAGTGGGCACTCGGTCCCGGCCGGTCCTaGCGGGGCCCGCAGAGGCATTTCTCTTCTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: GTDKWALGPGRS*RGPQRHFSSSS Trigger: GGAAGAAGAAGAGAAATGCCTCTGCGGGCCCCGTCAGGACCGGCCGGGACCGAGTGCCCACTTATCTGTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238892.2 |
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| CDS TCA 72 bp | GGTACAGATAAGTGGGCACTCGGTCCCGGCCGGTCCTaGCGGGGCCCGCAGAGGCATTTCTCTTCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GTDKWALGPGRS*RGPQRHFSSSS Trigger: TGAAGAAGAAGAGAAATGCCTCTGCGGGCCCCGTCAGGACCGGCCGGGACCGAGTGCCCACTTATCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS CAA 72 bp | CCGTGGCTCAGCAGGACGCAGGCGAAGCAGGCCGAGTaGCTGTGGTCCTCCTCAGAGGCTTTTCTAAGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PWLSRTQAKQAE*LWSSSEAFLSR Trigger: TCTGCTTAGAAAAGCCTCTGAGGAGGACCACAGCAACTCGGCCTGCTTCGCCTGCGTCCTGCTGAGCCACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CCA 72 bp | TTAGCGTCAATGTCGTTGATGGGCCCCGAGTCAGCCTaGATTCCATCATCGAGCTCCGTCCCTCGGCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LASMSLMGPESA*IPSSSSVPRHA Trigger: GGCATGCCGAGGGACGGAGCTCGATGATGGAATCCAGGCTGACTCGGGGCCCATCAACGACATTGACGCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CAA 90 bp | TCCTCTTCCCCGTGGCTCAGCAGGACGCAGGCGAAGCAGGCCGAGTaGCTGTGGTCCTCCTCAGAGGCTTTTCTAAGCAGATCTTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSSPWLSRTQAKQAE*LWSSSEAFLSRSCI Trigger: GATGCAAGATCTGCTTAGAAAAGCCTCTGAGGAGGACCACAGCAACTCGGCCTGCTTCGCCTGCGTCCTGCTGAGCCACGGGGAAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CAA 90 bp | TCGGCTTCCACCGGGATCTTGTTGCGGGGATTAGCGTCAATGTCGTaGATGGGCCCCGAGTCAGCCTGGATTCCATCATCGAGCTCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SASTGILLRGLASMS*MGPESAWIPSSSSV Trigger: GACGGAGCTCGATGATGGAATCCAGGCTGACTCGGGGCCCATCAACGACATTGACGCTAATCCCCGCAACAAGATCCCGGTGGAAGCCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS GCA 72 bp | TGCCTGGCCACCCTGTCGTTCACCCTGGTCAGGATCTaGATGATCTCGAGGTCCTTGCCATGCTCATTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CLATLSFTLVRI*MISRSLPCSFR Trigger: CCTGAATGAGCATGGCAAGGACCTCGAGATCATGCAGATCCTGACCAGGGTGAACGACAGGGTGGCCAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS GCA 72 bp | TCGTTGAAGCGTGGATCATCAGACTGGGACTCGAAGTaGCTGGCCACCCTGTCGTTCACCCTGGTCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SLKRGSSDWDSK*LATLSFTLVRI Trigger: GATCCTGACCAGGGTGAACGACAGGGTGGCCAGGCACTTCGAGTCCCAGTCTGATGATCCACGCTTCAACGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
||
| CDS CAA 90 bp | ACCCTGTCGTTCACCCTGGTCAGGATCTGCATGATCTCGAGGTCCTaGCCATGCTCATTCAGGATGGAGCAGAGGGCCTGCACAAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: TLSFTLVRICMISRS*PCSFRMEQRACTNQ Trigger: CTGGTTTGTGCAGGCCCTCTGCTCCATCCTGAATGAGCATGGCAAGGACCTCGAGATCATGCAGATCCTGACCAGGGTGAACGACAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS GCA 72 bp | TCCTTGCCATGCTCATTCAGGATGGAGCAGAGGGCCTaGACAAACCAGGAGCCTTTCCCTGGGTTCCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLPCSFRMEQRA*TNQEPFPGFLH Trigger: ATGGAGGAACCCAGGGAAAGGCTCCTGGTTTGTGCAGGCCCTCTGCTCCATCCTGAATGAGCATGGCAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
||
| CDS CAA 72 bp | ACCGGGATCTTGTTGCGGGGATTAGCGTCAATGTCGTaGATGGGCCCCGAGTCAGCCTGGATTCCATCATCG | + |
|
Preference number: 6 (lower is better) Translates to: TGILLRGLASMS*MGPESAWIPSS Trigger: CGATGATGGAATCCAGGCTGACTCGGGGCCCATCAACGACATTGACGCTAATCCCCGCAACAAGATCCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
||
| CDS CCA 72 bp | ATCTGCTTCTTCTCGTTGAAGCGTGGATCATCAGACTaGGACTCGAAGTGCCTGGCCACCCTGTCGTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: ICFFSLKRGSSD*DSKCLATLSFT Trigger: GGTGAACGACAGGGTGGCCAGGCACTTCGAGTCCCAGTCTGATGATCCACGCTTCAACGAGAAGAAGCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS CCA 72 bp | CACCATACACGGGATCTGCTTCTTCTCGTTGAAGCGTaGATCATCAGACTGGGACTCGAAGTGCCTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HHTRDLLLLVEA*IIRLGLEVPGH Trigger: GTGGCCAGGCACTTCGAGTCCCAGTCTGATGATCCACGCTTCAACGAGAAGAAGCAGATCCCGTGTATGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS CAA 72 bp | AGGTTTTGGAAGCACTTGAAGAGGGCCCCTGCATCTTaGTCCGTCCCATTCCGGACGTCCATACCTGTCGCT | + |
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Preference number: 6 (lower is better) Translates to: RFWKHLKRAPAS*SVPFRTSIPVA Trigger: AGCGACAGGTATGGACGTCCGGAATGGGACGGACAAAGATGCAGGGGCCCTCTTCAAGTGCTTCCAAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS TCA 72 bp | GCATGGACACCATACACGGGATCTGCTTCTTCTCGTTaGAGCGTGGATCATCAGACTGGGACTCGAAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: AWTPYTGSASSR*SVDHQTGTRSA Trigger: GGCACTTCGAGTCCCAGTCTGATGATCCACGCTTCAACGAGAAGAAGCAGATCCCGTGTATGGTGTCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS CCA 72 bp | TCCCTGGGTTCCTCCATGAGTAATAACCTGGAACCGTaGAGTAAGCAAAGAGGAAGTCGGCTTCCACCGGGA | + |
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Preference number: 6 (lower is better) Translates to: SLGSSMSNNLEP*SKQRGSRLPPG Trigger: TCCCGGTGGAAGCCGACTTCCTCTTTGCTTACTCCACGGTTCCAGGTTATTACTCATGGAGGAACCCAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS TCA 72 bp | CTGCACAAACCAGGAGCCTTTCCCTGGGTTCCTCCATaGGTAATAACCTGGAACCGTGGAGTAAGCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LHKPGAFPWVPP*VITWNRGVSKE Trigger: CTCTTTGCTTACTCCACGGTTCCAGGTTATTACTCATGGAGGAACCCAGGGAAAGGCTCCTGGTTTGTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026062.10 |
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| CDS CAA 90 bp | TGCACAAGAGCAGTCATTGTGGACGGTTACTTCAAAACCCAGGTTTaGGAAGCACTTGAAGAGGGCCCCTGCATCTTTGTCCGTCCCATT | + |
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Preference number: 6 (lower is better) Translates to: CTRAVIVDGYFKTQV*EALEEGPCIFVRPI Trigger: AATGGGACGGACAAAGATGCAGGGGCCCTCTTCAAGTGCTTCCAAAACCTGGGTTTTGAAGTAACCGTCCACAATGACTGCTCTTGTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CAA 72 bp | GCAGTCATTGTGGACGGTTACTTCAAAACCCAGGTTTaGGAAGCACTTGAAGAGGGCCCCTGCATCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: AVIVDGYFKTQV*EALEEGPCIFV Trigger: GACAAAGATGCAGGGGCCCTCTTCAAGTGCTTCCAAAACCTGGGTTTTGAAGTAACCGTCCACAATGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CAA 90 bp | GGCCGAGTTGCTGTGGTCCTCCTCAGAGGCTTTTCTAAGCAGATCTaGCATCTTTGCACAAGAGCAGTCATTGTGGACGGTTACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GRVAVVLLRGFSKQI*HLCTRAVIVDGYFK Trigger: TTTGAAGTAACCGTCCACAATGACTGCTCTTGTGCAAAGATGCAAGATCTGCTTAGAAAAGCCTCTGAGGAGGACCACAGCAACTCGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS GCA 72 bp | CTGTGGTCCTCCTCAGAGGCTTTTCTAAGCAGATCTTaGATCTTTGCACAAGAGCAGTCATTGTGGACGGTT | + |
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Preference number: 6 (lower is better) Translates to: LWSSSEAFLSRS*IFAQEQSLWTV Trigger: AACCGTCCACAATGACTGCTCTTGTGCAAAGATGCAAGATCTGCTTAGAAAAGCCTCTGAGGAGGACCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CAA 90 bp | GTCCCATTCCGGACGTCCATACCTGTCGCTTTGTCGAAGTTCTTGTaGTTTATGATGATGCATTTACCCATCTTCTGGAAATCCATGCGG | + |
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Preference number: 6 (lower is better) Translates to: VPFRTSIPVALSKFL*FMMMHLPIFWKSMR Trigger: CCGCATGGATTTCCAGAAGATGGGTAAATGCATCATCATAAACAACAAGAACTTCGACAAAGCGACAGGTATGGACGTCCGGAATGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CAA 90 bp | TCCGTCCCATTCCGGACGTCCATACCTGTCGCTTTGTCGAAGTTCTaGTTGTTTATGATGATGCATTTACCCATCTTCTGGAAATCCATG | + |
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Preference number: 6 (lower is better) Translates to: SVPFRTSIPVALSKF*LFMMMHLPIFWKSM Trigger: CATGGATTTCCAGAAGATGGGTAAATGCATCATCATAAACAACAAGAACTTCGACAAAGCGACAGGTATGGACGTCCGGAATGGGACGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CCA 72 bp | AGCAGATCTTGCATCTTTGCACAAGAGCAGTCATTGTaGACGGTTACTTCAAAACCCAGGTTTTGGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: SRSCIFAQEQSL*TVTSKPRFWKH Trigger: GTGCTTCCAAAACCTGGGTTTTGAAGTAACCGTCCACAATGACTGCTCTTGTGCAAAGATGCAAGATCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS GCA 72 bp | CTCCTCAGAGGCTTTTCTAAGCAGATCTTGCATCTTTaGACAAGAGCAGTCATTGTGGACGGTTACTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LLRGFSKQILHL*TRAVIVDGYFK Trigger: TTTGAAGTAACCGTCCACAATGACTGCTCTTGTGCAAAGATGCAAGATCTGCTTAGAAAAGCCTCTGAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CAA 72 bp | CTAAGCAGATCTTGCATCTTTGCACAAGAGCAGTCATaGTGGACGGTTACTTCAAAACCCAGGTTTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSRSCIFAQEQS*WTVTSKPRFWK Trigger: CTTCCAAAACCTGGGTTTTGAAGTAACCGTCCACAATGACTGCTCTTGTGCAAAGATGCAAGATCTGCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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| CDS CAA 72 bp | CGGACGTCCATACCTGTCGCTTTGTCGAAGTTCTTGTaGTTTATGATGATGCATTTACCCATCTTCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RTSIPVALSKFL*FMMMHLPIFWK Trigger: TTTCCAGAAGATGGGTAAATGCATCATCATAAACAACAAGAACTTCGACAAAGCGACAGGTATGGACGTCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026062.10 ENSMUST00000238892.2 |
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