Pregenerated sensors for CASP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029863Ensembl transcript IDs: ENSMUST00000031895.13, ENSMUST00000156829.8
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCGGCCACGTGCATGTCACAAGCTCTTTCAGAGAACACCTGAGTaGGGGCCTCAATGTACCAGGAACCCCGTTTGGTGTTCCGCATGG | + |
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Preference number: 1 (lower is better) Translates to: CRPRACHKLFQRTPE*GPQCTRNPVWCSAW Trigger: CCATGCGGAACACCAAACGGGGTTCCTGGTACATTGAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCTTGTGACATGCACGTGGCCGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR TCA 90 bp | AGCATGTCGGCCACGTGCATGTCACAAGCTCTTTCAGAGAACACCTaGGTGAGGGCCTCAATGTACCAGGAACCCCGTTTGGTGTTCCGC | + |
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Preference number: 1 (lower is better) Translates to: SMSATCMSQALSENT*VRASMYQEPRLVFR Trigger: GCGGAACACCAAACGGGGTTCCTGGTACATTGAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCTTGTGACATGCACGTGGCCGACATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR TCA 90 bp | CATGGCAGCATTACCTTTAAGGCAAGCATAGCCACATATCATGTCTaGGCGAGTAGGCAGTCTCATCTTCATCAACTCCTCTTTGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: HGSITFKASIATYHV*ASRQSHLHQLLFAS Trigger: GCTGGCAAAGAGGAGTTGATGAAGATGAGACTGCCTACTCGCTCAGACATGATATGTGGCTATGCTTGCCTTAAAGGTAATGCTGCCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR TCA 90 bp | CAGAGATGGCTGACAGGAAACAAGCCTGGGAGAATCTCATATCCCTaGGAGGGTAGACAGAACAAAAACCATTCTGAAGAGAAGTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: QRWLTGNKPGRISYP*EGRQNKNHSEEKSP Trigger: TGGAGACTTCTCTTCAGAATGGTTTTTGTTCTGTCTACCCTCTCAGGGATATGAGATTCTCCCAGGCTTGTTTCCTGTCAGCCATCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR GCA 90 bp | CAACAAACATTAGTTGAGCACCTCAACTACCATAGGCCTCAAATTTaGTGGGCACTATGGAGATGTGAAAGAAGTTGTCTCACACGTGAT | + |
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Preference number: 1 (lower is better) Translates to: QQTLVEHLNYHRPQI*WALWRCERSCLTRD Trigger: ATCACGTGTGAGACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTTGAGGTGCTCAACTAATGTTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR CCA 90 bp | CAAACATTAGTTGAGCACCTCAACTACCATAGGCCTCAAATTTGCTaGGCACTATGGAGATGTGAAAGAAGTTGTCTCACACGTGATATG | + |
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Preference number: 1 (lower is better) Translates to: QTLVEHLNYHRPQIC*ALWRCERSCLTRDM Trigger: CATATCACGTGTGAGACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTTGAGGTGCTCAACTAATGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR TCA 90 bp | ATGCATAGAAACTTCGCAAGTAGTAGGATCTCATCTGTCCCTTCATaGCAGATGAAAACACCTACATTAAATTGGGACATCTTCCAAATC | + |
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Preference number: 1 (lower is better) Translates to: MHRNFASSRISSVPS*QMKTPTLNWDIFQI Trigger: GATTTGGAAGATGTCCCAATTTAATGTAGGTGTTTTCATCTGTCATGAAGGGACAGATGAGATCCTACTACTTGCGAAGTTTCTATGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR TCA 90 bp | AGCATAGTGAGAAATCACCATTTAATGAGATCCAAAGGGAAGGTATaGGCCAGATCTCGTAAGCTGGGTGTAAGAATTTGCATTTTAGAT | + |
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Preference number: 1 (lower is better) Translates to: SIVRNHHLMRSKGKV*ARSRKLGVRICILD Trigger: ATCTAAAATGCAAATTCTTACACCCAGCTTACGAGATCTGGCTCATACCTTCCCTTTGGATCTCATTAAATGGTGATTTCTCACTATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR GCA 90 bp | AGATGCCTTGGGAACAAAAATATCACAAACATTGAGAAATCCAAATaGCCTCTTCCCACAATAATACTGTGTTCACAATGTCATTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: RCLGNKNITNIEKSK*PLPTIILCSQCHFL Trigger: TAGAAAATGACATTGTGAACACAGTATTATTGTGGGAAGAGGGCATTTGGATTTCTCAATGTTTGTGATATTTTTGTTCCCAAGGCATCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR TCA 90 bp | GCATCACGTGGGTGGGTAGCCTGGGAACAGGTAGAGTTGCTGGCACAGAGTACTGCCACATATCATGTCTaGGCGAGTAGGCAGTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: ASRGWVAWEQVELLAQSTATYHV*ASRQSH Trigger: ATGAGACTGCCTACTCGCTCAGACATGATATGTGGC...AGTACTCTGTGCCAGCAACTCTACCTGTTCCCAGGCTACCCACCCACGTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR-3UTR GCA 90 bp | TCGGTGGAATTCTGTGCCAGGGGCATAGCCTTCACGCTCCTTGATAAGGGCATTAGCATGTCGGCCACGTaGATGTCACAAGCTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SVEFCARGIAFTLLDKGISMSAT*MSQALS Trigger: TGAAAGAGCTTGTGACATGCACGTGGCCGACATGCT...AATGCCCTTATCAAGGAGCGTGAAGGCTATGCCCCTGGCACAGAATTCCACCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR-3UTR CCA 90 bp | TTCACCTTAACAAGCATGTCGGCCACGTGCATGTCACAAGCTCTTTCAGAGAACACCAGGAACCCCGTTTaGTGTTCCGCATGGCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: FTLTSMSATCMSQALSENTRNPV*CSAWQH Trigger: ATGCTGCCATGCGGAACACCAAACGGGGTTCCTGGT...GTTCTCTGAAAGAGCTTGTGACATGCACGTGGCCGACATGCTTGTTAAGGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR CAA 90 bp | ATCATGTCTGAGCGAGTAGGCAGTCTCATCTTCATCAACTCCTCTTaGCCAGCATCACTCTCCTCACATCCAGGGGATTGTGTGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: IMSERVGSLIFINSS*PASLSSHPGDCVWF Trigger: GAACCACACACAATCCCCTGGATGTGAGGAGAGTGATGCTGGCAAAGAGGAGTTGATGAAGATGAGACTGCCTACTCGCTCAGACATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATTACAGCCTGCAGTAAGCACAACAGAGACCAACATGATGCCCTCATAAGGAACACAGAGAAACAATaGGAAGGGAGACGCTGCCAC | + |
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Preference number: 2 (lower is better) Translates to: AITACSKHNRDQHDALIRNTEKQ*EGRRCH Trigger: GTGGCAGCGTCTCCCTTCTCATTGTTTCTCTGTGTT...CCTTATGAGGGCATCATGTTGGTCTCTGTTGTGCTTACTGCAGGCTGTAATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR GCA 90 bp | CACCTTAACAAGCATGTCGGCCACGTGCATGTCACAAGCTCTTTCAGAGAACACTCATCAACTCCTCTTTaGCAGCATCACTCTCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: HLNKHVGHVHVTSSFREHSSTPL*QHHSPH Trigger: GTGAGGAGAGTGATGCTGGCAAAGAGGAGTTGATGA...GTGTTCTCTGAAAGAGCTTGTGACATGCACGTGGCCGACATGCTTGTTAAGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGTACAGTGTAAGTGCATGCAGAAGCCACAGTAAGGAAGGAGAGACATCCGACAGGAAACAAGCCTaGGAGAATCTCATATCCCTG | + |
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Preference number: 2 (lower is better) Translates to: VKYSVSACRSHSKEGETSDRKQA*ENLISL Trigger: CAGGGATATGAGATTCTCCCAGGCTTGTTTCCTGTC...GGATGTCTCTCCTTCCTTACTGTGGCTTCTGCATGCACTTACACTGTACTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR GCA 90 bp | TTCCCACTCTCTTGGAGCATTCAGCCTCAGAGGGAACAAGTGAAACAAGCAAAATGTTCAAAGGCTGGGTaGACTGAACACAAAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: FPLSWSIQPQREQVKQAKCSKAG*TEHKGT Trigger: GGTTCCTTTGTGTTCAGTGCACCCAGCCTTTGAACA...TTTTGCTTGTTTCACTTGTTCCCTCTGAGGCTGAATGCTCCAAGAGAGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR TCA 90 bp | AAGAGGGGCTGGAGCATAGTGAGAAATCACCATTTAATGAGATCCAAAGGGAAGAAAGAAGCCTCACGCTaGAGCAGAAGGCAGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: KRGWSIVRNHHLMRSKGKKEASR*SRRQKE Trigger: TTCTTTCTGCCTTCTGCTTCAGCGTGAGGCTTCTTT...CTTCCCTTTGGATCTCATTAAATGGTGATTTCTCACTATGCTCCAGCCCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR TCA 90 bp | ACTTGGTTCATACAACAAACATTAGTTGAGCACCTCAACTACCATAGGCCTCAAAAAGACAGAGATGGCTaGCAGGAAACAAGCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: TWFIQQTLVEHLNYHRPQKDRDG*QETSLG Trigger: TCCCAGGCTTGTTTCCTGTCAGCCATCTCTGTCTTT...TTGAGGCCTATGGTAGTTGAGGTGCTCAACTAATGTTTGTTGTATGAACCAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR TCA 90 bp | CTAGGTTATATCACATATGGTACTATCCCCACTAAAACACAGAGAAACAATGAGAACCAATGGAAAGGCTaGGGGACTGTCCTTCACCTA | + |
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Preference number: 2 (lower is better) Translates to: LGYITYGTIPTKTQRNNENQWKG*GTVLHL Trigger: TAGGTGAAGGACAGTCCCTCAGCCTTTCCATTGGTT...CTCATTGTTTCTCTGTGTTTTAGTGGGGATAGTACCATATGTGATATAACCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR TCA 90 bp | TCCAAATGCCCTCTTCCCACAATAATACTGTGTTCACAATGTCATTTTCTAGGCAGAATCTCATATCCCTaGGAGGGTAGACAGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SKCPLPTIILCSQCHFLGRISYP*EGRQNK Trigger: TTTGTTCTGTCTACCCTCTCAGGGATATGAGATTCT...GCCTAGAAAATGACATTGTGAACACAGTATTATTGTGGGAAGAGGGCATTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR TCA 90 bp | GCCTTGGGAACAAAAATATCACAAACATTGAGAAATCCAAATGCCCTCTTCCCAGAACAAAAACCATTCTaGAGAGAAGTCTCCATTGTG | + |
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Preference number: 2 (lower is better) Translates to: ALGTKISQTLRNPNALFPEQKPF*REVSIV Trigger: CACAATGGAGACTTCTCTTCAGAATGGTTTTTGTTC...TGGGAAGAGGGCATTTGGATTTCTCAATGTTTGTGATATTTTTGTTCCCAAGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR CCA 90 bp | CACAGAAAACCAAAGAAGCCTCACGCTGAAGCAGAAGGCAGAAAGAATAAGCAAACTCCTAAGATGCCTTaGGAACAAAAATATCACAAA | + |
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Preference number: 2 (lower is better) Translates to: HRKPKKPHAEAEGRKNKQTPKMP*EQKYHK Trigger: TTTGTGATATTTTTGTTCCCAAGGCATCTTAGGAGT...TTGCTTATTCTTTCTGCCTTCTGCTTCAGCGTGAGGCTTCTTTGGTTTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR CCA 90 bp | AACTACCATAGGCCTCAAATTTGCTGGGCACTATGGAGATGTGAAAGAAGTTGTGTAAGTGCCAGTTACTaGATATCAGTAAGTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: NYHRPQICWALWRCERSCVSASY*ISVSKK Trigger: CTTCTTACTTACTGATATCCAGTAACTGGCACTTAC...ACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR GCA 90 bp | ACCACTTGGTTCATACAACAAACATTAGTTGAGCACCTCAACTACCATAGGCCTATTGAGAAATCCAAATaGCCTCTTCCCACAATAATA | + |
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Preference number: 2 (lower is better) Translates to: TTWFIQQTLVEHLNYHRPIEKSK*PLPTII Trigger: TATTATTGTGGGAAGAGGGCATTTGGATTTCTCAAT...AGGCCTATGGTAGTTGAGGTGCTCAACTAATGTTTGTTGTATGAACCAAGTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCGGCATCACGTGGGTGGGTAGCCTGGGAACAGGTAGAGTTGCTGGCACATACTCAGACATCTCCTaGCATCGGTGGAATTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: AGGITWVGSLGTGRVAGTYSDIS*HRWNSV Trigger: CACAGAATTCCACCGATGCAAGGAGATGTCTGAGTA...TGTGCCAGCAACTCTACCTGTTCCCAGGCTACCCACCCACGTGATGCCGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR TCA 72 bp | GCCACGTGCATGTCACAAGCTCTTTCAGAGAACACCTaGGTGAGGGCCTCAATGTACCAGGAACCCCGTTTG | + |
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Preference number: 3 (lower is better) Translates to: ATCMSQALSENT*VRASMYQEPRL Trigger: CAAACGGGGTTCCTGGTACATTGAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCTTGTGACATGCACGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR TCA 72 bp | CGTGCATGTCACAAGCTCTTTCAGAGAACACCTGAGTaGGGGCCTCAATGTACCAGGAACCCCGTTTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: RACHKLFQRTPE*GPQCTRNPVWC Trigger: ACACCAAACGGGGTTCCTGGTACATTGAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCTTGTGACATGCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR CCA 72 bp | GTAAAGAGGGGAACCAGTACAAAGCAAGAGAGACCCTaGAGGCCAGCCGTCAAGTACAGTGTAAGTGCATGC | + |
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Preference number: 3 (lower is better) Translates to: VKRGTSTKQERP*RPAVKYSVSAC Trigger: GCATGCACTTACACTGTACTTGACGGCTGGCCTCCAGGGTCTCTCTTGCTTTGTACTGGTTCCCCTCTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR CAA 90 bp | TTCACCTTAACAAGCATGTCGGCCACGTGCATGTCACAAGCTCTTTCAGAGAACTACCAGGAACCCCGTTaGGTGTTCCGCATGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: FTLTSMSATCMSQALSENYQEPR*VFRMAA Trigger: TGCTGCCATGCGGAACACCAAACGGGGTTCCTGGTA...GTTCTCTGAAAGAGCTTGTGACATGCACGTGGCCGACATGCTTGTTAAGGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR-3UTR CAA 90 bp | TCTTTCAGAGAACACCTGAGTGAGGGCCTCAATGTACCAGGAACCCCGTTTGGTCTCACATCCAGGGGATaGTGTGTGGTTCTTTCCATC | + |
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Preference number: 3 (lower is better) Translates to: SFREHLSEGLNVPGTPFGLTSRG*CVVLSI Trigger: GATGGAAAGAACCACACACAATCCCCTGGATGTGAG...ACCAAACGGGGTTCCTGGTACATTGAGGCCCTCACTCAGGTGTTCTCTGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR TCA 72 bp | GCCAAAGGAGAGTTCAGAACACCTGCAAGACGGAGATaGGGACCTAAGAGGGGCTGGAGCATAGTGAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: AKGEFRTPARRR*GPKRGWSIVRN Trigger: ATTTCTCACTATGCTCCAGCCCCTCTTAGGTCCTCATCTCCGTCTTGCAGGTGTTCTGAACTCTCCTTTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR CCA 72 bp | CCAGCATCACTCTCCTCACATCCAGGGGATTGTGTGTaGTTCTTTCCATCTTGCTGGTCGACACCTCTATCT | + |
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Preference number: 3 (lower is better) Translates to: PASLSSHPGDCV*FFPSCWSTPLS Trigger: AGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGTGATGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTGCAAGAGAAGAGAAGTCTCCATaGTGCCCCCAGTGGTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: ARLKNQRLAKGEFRTPAREEKSP*CPQWSS Trigger: ACTGGACCACTGGGGGCACAATGGAGACTTCTCTTC...TCTTGCAGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR-3UTR CAA 90 bp | CCGTTTGGTGTTCCGCATGGCAGCATTACCTTTAAGGCAAGCATAGCCACATATGTGGTTCTTTCCATCTaGCTGGTCGACACCTCTATC | + |
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Preference number: 3 (lower is better) Translates to: PFGVPHGSITFKASIATYVVLSI*LVDTSI Trigger: GATAGAGGTGTCGACCAGCAAGATGGAAAGAACCAC...ATATGTGGCTATGCTTGCCTTAAAGGTAATGCTGCCATGCGGAACACCAAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGGCATTCACCTTAACAAGCATGTCGGCCACGTGCATGTCACAAGCTCTTTCTTCATCAACTCCTCTTaGCCAGCATCACTCTCCTCA | + |
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Preference number: 3 (lower is better) Translates to: KGIHLNKHVGHVHVTSSFFINSS*PASLSS Trigger: TGAGGAGAGTGATGCTGGCAAAGAGGAGTTGATGAA...GAAAGAGCTTGTGACATGCACGTGGCCGACATGCTTGTTAAGGTGAATGCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR-3UTR CAA 90 bp | GCCATTACAGCCTGCAGTAAGCACAACAGAGACCAACATGATGCCCTCATAAGGAACACCTACATTAAATaGGGACATCTTCCAAATCTC | + |
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Preference number: 3 (lower is better) Translates to: AITACSKHNRDQHDALIRNTYIK*GHLPNL Trigger: GAGATTTGGAAGATGTCCCAATTTAATGTAGGTGTT...CCTTATGAGGGCATCATGTTGGTCTCTGTTGTGCTTACTGCAGGCTGTAATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR TCA 72 bp | GCTGCTGGTCTCCTTCCTTTACTCAGGAAACATTCATaGAGACCTAGTAAGTGCCAGTTACTGGATATCAGT | + |
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Preference number: 3 (lower is better) Translates to: AAGLLPLLRKHS*RPSKCQLLDIS Trigger: ACTGATATCCAGTAACTGGCACTTACTAGGTCTTCATGAATGTTTCCTGAGTAAAGGAAGGAGACCAGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR TCA 72 bp | ATTACCTTTAAGGCAAGCATAGCCACATATCATGTCTaGGCGAGTAGGCAGTCTCATCTTCATCAACTCCTC | + |
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Preference number: 3 (lower is better) Translates to: ITFKASIATYHV*ASRQSHLHQLL Trigger: GAGGAGTTGATGAAGATGAGACTGCCTACTCGCTCAGACATGATATGTGGCTATGCTTGCCTTAAAGGTAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| 3UTR GCA 72 bp | TTAGTTGAGCACCTCAACTACCATAGGCCTCAAATTTaGTGGGCACTATGGAGATGTGAAAGAAGTTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: LVEHLNYHRPQI*WALWRCERSCL Trigger: GAGACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTTGAGGTGCTCAACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR CCA 72 bp | CTCAACTACCATAGGCCTCAAATTTGCTGGGCACTATaGAGATGTGAAAGAAGTTGTCTCACACGTGATATG | + |
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Preference number: 3 (lower is better) Translates to: LNYHRPQICWAL*RCERSCLTRDM Trigger: CATATCACGTGTGAGACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTTGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR TCA 72 bp | AGAAATCACCATTTAATGAGATCCAAAGGGAAGGTATaGGCCAGATCTCGTAAGCTGGGTGTAAGAATTTGC | + |
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Preference number: 3 (lower is better) Translates to: RNHHLMRSKGKV*ARSRKLGVRIC Trigger: GCAAATTCTTACACCCAGCTTACGAGATCTGGCTCATACCTTCCCTTTGGATCTCATTAAATGGTGATTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR CCA 72 bp | GGAAACATTCATGAAGACCTAGTAAGTGCCAGTTACTaGATATCAGTAAGTAAGAAGCACAGTTCCCACTCT | + |
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Preference number: 3 (lower is better) Translates to: GNIHEDLVSASY*ISVSKKHSSHS Trigger: AGAGTGGGAACTGTGCTTCTTACTTACTGATATCCAGTAACTGGCACTTACTAGGTCTTCATGAATGTTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR CCA 72 bp | ACTTATGCATCCTATACTGACCCAAAAGGCAGAATTTaGCAGCAAGTCTTCAAACCACTTGGTTCATACAAC | + |
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Preference number: 3 (lower is better) Translates to: TYASYTDPKGRI*QQVFKPLGSYN Trigger: GTTGTATGAACCAAGTGGTTTGAAGACTTGCTGCCAAATTCTGCCTTTTGGGTCAGTATAGGATGCATAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| 3UTR TCA 72 bp | AACTTCGCAAGTAGTAGGATCTCATCTGTCCCTTCATaGCAGATGAAAACACCTACATTAAATTGGGACATC | + |
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Preference number: 3 (lower is better) Translates to: NFASSRISSVPS*QMKTPTLNWDI Trigger: GATGTCCCAATTTAATGTAGGTGTTTTCATCTGTCATGAAGGGACAGATGAGATCCTACTACTTGCGAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR GCA 90 bp | AACCATTCTGAAGAGAAGTCTCCATTGTGCCCCCAGTGGTCCAGTGGCCTCCAACTGTGCAGGGAGGACTaGGACCTCCCGCTCGGCGCC | + |
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Preference number: 4 (lower is better) Translates to: NHSEEKSPLCPQWSSGLQLCRED*DLPLGA Trigger: GGCGCCGAGCGGGAGGTCGCAGTCCTCCCTGCACAG...TTGGAGGCCACTGGACCACTGGGGGCACAATGGAGACTTCTCTTCAGAATGGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CCA 90 bp | GCAGGCGGCATCACGTGGGTGGGTAGCCTGGGAACAGGTAGAGTTGCTGGCACACTGCCCCCTTTGGCCTaGATGAGCTCCCTCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGGITWVGSLGTGRVAGTLPPLA*MSSLIS Trigger: GGAAATGAGGGAGCTCATCCAGGCCAAAGGGGGCAG...TGTGCCAGCAACTCTACCTGTTCCCAGGCTACCCACCCACGTGATGCCGCCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| CDS-3UTR TCA 90 bp | GTCGGCCACGTGCATGTCACAAGCTCTTTCAGAGAACACCTGAGTGAGGGCCTCAGGCGGAGCTGCTTGTaGGGAGGGCAGGACTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VGHVHVTSSFREHLSEGLRRSCL*GGQDSH Trigger: GTGTGAGTCCTGCCCTCCTCACAAGCAGCTCCGCCT...GAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCTTGTGACATGCACGTGGCCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCGGCATCACGTGGGTGGGTAGCCTGGGAACAGGTAGAGTTGCTGGCACAGGTCTTTCTCTCCAGTaGAGTGCACATTGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AGGITWVGSLGTGRVAGTGLSLQ*SAHCSA Trigger: TGCTGAGCAATGTGCACTTCACTGGAGAGAAAGACC...TGTGCCAGCAACTCTACCTGTTCCCAGGCTACCCACCCACGTGATGCCGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR GCA 90 bp | ACAGAGTACTACAGTACTCAGACATCTCCTTGCATCGGTGGAATTCTGTGCCAGCTGTGCAGGGAGGACTaGGACCTCCCGCTCGGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TEYYSTQTSPCIGGILCQLCRED*DLPLGA Trigger: GGCGCCGAGCGGGAGGTCGCAGTCCTCCCTGCACAG...CTGGCACAGAATTCCACCGATGCAAGGAGATGTCTGAGTACTGTAGTACTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | GTCGGCCACGTGCATGTCACAAGCTCTTTCAGAGAACACCTGAGTGAGGGCCTCACCTTCCACACCATGTaGGAGGAGTGCCACTACGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGHVHVTSSFREHLSEGLTFHTM*EECHYA Trigger: TGCGTAGTGGCACTCCTCTCACATGGTGTGGAAGGT...GAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCTTGTGACATGCACGTGGCCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | ACCATTCTGAAGAGAAGTCTCCATTGTGCCCCCAGTGGTCCAGTGGCCTCCAACCCCCTTTGGCCTGGATaGGCTCCCTCATTTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TILKRSLHCAPSGPVASNPLWPG*APSFPK Trigger: CTTTGGAAATGAGGGAGCTCATCCAGGCCAAAGGGG...GTTGGAGGCCACTGGACCACTGGGGGCACAATGGAGACTTCTCTTCAGAATGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | GGTGAAGGTAAAGAGGGGAACCAGTACAAAGCAAGAGAGACCCTGGAGGCCAGCGTTCCACATTCTGGCTaGAACTGCCCCCTTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEGKEGNQYKARETLEASVPHSG*NCPLWP Trigger: AGGCCAAAGGGGGCAGTTTCAGCCAGAATGTGGAAC...GCTGGCCTCCAGGGTCTCTCTTGCTTTGTACTGGTTCCCCTCTTTACCTTCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | GGCCACGTGCATGTCACAAGCTCTTTCAGAGAACACCTGAGTGAGGGCCTCAATAGTAAGTCTTCCAAGTaGCCCTGCCTGGTCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GHVHVTSSFREHLSEGLNSKSSK*PCLVSR Trigger: GCGGGAGACCAGGCAGGGTCACTTGGAAGACTTACT...ATTGAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCTTGTGACATGCACGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | GCCATTACAGCCTGCAGTAAGCACAACAGAGACCAACATGATGCCCTCATAAGGAGGCGGAGCTGCTTGTaGGGAGGGCAGGACTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AITACSKHNRDQHDALIRRRSCL*GGQDSH Trigger: GTGTGAGTCCTGCCCTCCTCACAAGCAGCTCCGCCT...CCTTATGAGGGCATCATGTTGGTCTCTGTTGTGCTTACTGCAGGCTGTAATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR GCA 90 bp | CCAGCATCACTCTCCTCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTTGCTCGCTCAGCAGCAGCTaGTTGGCCAGCACCACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PASLSSHPGDCVWFFPSCSLSSS*LASTTR Trigger: TCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGAGCGA...GCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGTGATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR CCA 90 bp | ACCATTCTGAAGAGAAGTCTCCATTGTGCCCCCAGTGGTCCAGTGGCCTCCAACTCAGCAGCAGCTGCTTaGCCAGCACCACTCGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TILKRSLHCAPSGPVASNSAAAA*PAPLDS Trigger: AGAATCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGA...GTTGGAGGCCACTGGACCACTGGGGGCACAATGGAGACTTCTCTTCAGAATGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | ACCATTCTGAAGAGAAGTCTCCATTGTGCCCCCAGTGGTCCAGTGGCCTCCAACGGTCTTTCTCTCCAGTaGAGTGCACATTGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TILKRSLHCAPSGPVASNGLSLQ*SAHCSA Trigger: TGCTGAGCAATGTGCACTTCACTGGAGAGAAAGACC...GTTGGAGGCCACTGGACCACTGGGGGCACAATGGAGACTTCTCTTCAGAATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | AAGGGCATTCACCTTAACAAGCATGTCGGCCACGTGCATGTCACAAGCTCTTTCCTACGCAGGAGTCTGTaGCCCGGTGTGCAGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: KGIHLNKHVGHVHVTSSFLRRSL*PGVQVT Trigger: AGTTACCTGCACACCGGGTCACAGACTCCTGCGTAG...GAAAGAGCTTGTGACATGCACGTGGCCGACATGCTTGTTAAGGTGAATGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR GCA 90 bp | GTCAAGTACAGTGTAAGTGCATGCAGAAGCCACAGTAAGGAAGGAGAGACATCCTCGCTCAGCAGCAGCTaGTTGGCCAGCACCACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VKYSVSACRSHSKEGETSSLSSS*LASTTR Trigger: TCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGAGCGA...GGATGTCTCTCCTTCCTTACTGTGGCTTCTGCATGCACTTACACTGTACTTGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | ACTCTCCTCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTTGCTGGTCGACCTGGGGTCCTCTCTTTaGCAGCAGGTTGAGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLLTSRGLCVVLSILLVDLGSSL*QQVEEF Trigger: GAACTCCTCAACCTGCTGCCAAAGAGAGGACCCCAG...GTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| 3UTR CAA 72 bp | CTCTTTGCCAGCATCACTCTCCTCACATCCAGGGGATaGTGTGTGGTTCTTTCCATCTTGCTGGTCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: LFASITLLTSRG*CVVLSILLVDT Trigger: GGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGTGATGCTGGCAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | ATAGCCTTCACGCTCCTTGATAAGGGCATTCACCTTAACAAGCATGTCGGCCACCCCCTTTGGCCTGGATaGGCTCCCTCATTTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IAFTLLDKGIHLNKHVGHPLWPG*APSFPK Trigger: CTTTGGAAATGAGGGAGCTCATCCAGGCCAAAGGGG...GTGGCCGACATGCTTGTTAAGGTGAATGCCCTTATCAAGGAGCGTGAAGGCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | CAGCATCACTCTCCTCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTTGCTGTTCCACATTCTGGCTaGAACTGCCCCCTTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QHHSPHIQGIVCGSFHLAVPHSG*NCPLWP Trigger: AGGCCAAAGGGGGCAGTTTCAGCCAGAATGTGGAAC...AGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGTGATGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGGAACAGGTAGAGTTGCTGGCACAGAGTACTACAGTACTCAGACATCTCGGTGGGAGTACGTGCTaGATATCTGAGAGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: AWEQVELLAQSTTVLRHLGGSTC*ISERVV Trigger: CACAACCCTCTCAGATATTCAGCACGTACTCCCACC...GAGATGTCTGAGTACTGTAGTACTCTGTGCCAGCAACTCTACCTGTTCCCAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | GTCGGCCACGTGCATGTCACAAGCTCTTTCAGAGAACACCTGAGTGAGGGCCTCAAAACCTCTTGGAGCTaGAGCAGTTTGCCATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: VGHVHVTSSFREHLSEGLKTSWS*SSLPST Trigger: TGTAGATGGCAAACTGCTTCAGCTCCAAGAGGTTTT...GAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCTTGTGACATGCACGTGGCCGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGTACAGTGTAAGTGCATGCAGAAGCCACAGTAAGGAAGGAGAGACATCCCTGCCCCCTTTGGCCTaGATGAGCTCCCTCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VKYSVSACRSHSKEGETSLPPLA*MSSLIS Trigger: GGAAATGAGGGAGCTCATCCAGGCCAAAGGGGGCAG...GGATGTCTCTCCTTCCTTACTGTGGCTTCTGCATGCACTTACACTGTACTTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | GCCATTACAGCCTGCAGTAAGCACAACAGAGACCAACATGATGCCCTCATAAGGCTGGGGTCCTCTCTTTaGCAGCAGGTTGAGGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AITACSKHNRDQHDALIRLGSSL*QQVEEF Trigger: GAACTCCTCAACCTGCTGCCAAAGAGAGGACCCCAG...CCTTATGAGGGCATCATGTTGGTCTCTGTTGTGCTTACTGCAGGCTGTAATGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | GCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTGCAAGACTACGCAGGAGTCTGTaGCCCGGTGTGCAGGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: ARLKNQRLAKGEFRTPARLRRSL*PGVQVT Trigger: AGTTACCTGCACACCGGGTCACAGACTCCTGCGTAG...TCTTGCAGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | GCACAGAGTACTACAGTACTCAGACATCTCCTTGCATCGGTGGAATTCTGTGCCGTGACTAGAGTAGTGTaGTCCACATCCCCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQSTTVLRHLLASVEFCAVTRVV*STSPPE Trigger: CTCTGGAGGGGATGTGGACCACACTACTCTAGTCAC...GGCACAGAATTCCACCGATGCAAGGAGATGTCTGAGTACTGTAGTACTCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTGCAAGACGTGGGTGGGTAGCCTaGGAACAGGTAGAGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARLKNQRLAKGEFRTPARRGWVA*EQVELL Trigger: CAGCAACTCTACCTGTTCCCAGGCTACCCACCCACG...TCTTGCAGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| 3UTR CAA 72 bp | AGACAGAACAAAAACCATTCTGAAGAGAAGTCTCCATaGTGCCCCCAGTGGTCCAGTGGCCTCCAACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQNKNHSEEKSP*CPQWSSGLQQQ Trigger: CTGCTGTTGGAGGCCACTGGACCACTGGGGGCACAATGGAGACTTCTCTTCAGAATGGTTTTTGTTCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| 3UTR CAA 72 bp | GAGCGAGTAGGCAGTCTCATCTTCATCAACTCCTCTTaGCCAGCATCACTCTCCTCACATCCAGGGGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ERVGSLIFINSS*PASLSSHPGDC Trigger: ACAATCCCCTGGATGTGAGGAGAGTGATGCTGGCAAAGAGGAGTTGATGAAGATGAGACTGCCTACTCGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCGCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTAGCATGTCGGCCACGTaGATGTCACAAGCTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ASARLKNQRLAKGEFRTPSMSAT*MSQALS Trigger: TGAAAGAGCTTGTGACATGCACGTGGCCGACATGCT...AGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGCGGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | GGTAGAGTTGCTGGCACAGAGTACTACAGTACTCAGACATCTCCTTGCATCGGTAGGAGTTCCACATTCTaGCTGAAACTGCCCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRVAGTEYYSTQTSPCIGRSSTF*LKLPPL Trigger: CAAAGGGGGCAGTTTCAGCCAGAATGTGGAACTCCT...ACCGATGCAAGGAGATGTCTGAGTACTGTAGTACTCTGTGCCAGCAACTCTACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | AGCATTCAGCCTCAGAGGGAACAAGTGAAACAAGCAAAAGTGCCATTACAGCCTGGTGGGAGTACGTGCTaGATATCTGAGAGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SIQPQREQVKQAKVPLQPGGSTC*ISERVV Trigger: CACAACCCTCTCAGATATTCAGCACGTACTCCCACC...AGGCTGTAATGGCACTTTTGCTTGTTTCACTTGTTCCCTCTGAGGCTGAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR GCA 90 bp | GCACAGAGTACTACAGTACTCAGACATCTCCTTGCATCGGTGGAATTCTGTGCCCATCTACACCATAGATaGCACCTTCCACACCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQSTTVLRHLLASVEFCAHLHHR*HLPHHV Trigger: CACATGGTGTGGAAGGTGGCATCTATGGTGTAGATG...GGCACAGAATTCCACCGATGCAAGGAGATGTCTGAGTACTGTAGTACTCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR GCA 90 bp | GCCTCCGCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTTCATCAACTCCTCTTTaGCAGCATCACTCTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASARLKNQRLAKGEFRTPSSTPL*QHHSPH Trigger: GTGAGGAGAGTGATGCTGGCAAAGAGGAGTTGATGA...AGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGCGGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | GATAAGGGCATTCACCTTAACAAGCATGTCGGCCACGTGCATGTCACAAGCTCTTTCAGTGTTTCCTGGTaGTCAGGATGCATTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: DKGIHLNKHVGHVHVTSSFSVSW*SGCIPH Trigger: GTGTGGAATGCATCCTGACCACCAGGAAACACTGAA...AGAGCTTGTGACATGCACGTGGCCGACATGCTTGTTAAGGTGAATGCCCTTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGTACAGTGTAAGTGCATGCAGAAGCCACAGTAAGGAAGGAGAGACATCCAGGAGTTCCACATTCTaGCTGAAACTGCCCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKYSVSACRSHSKEGETSRSSTF*LKLPPL Trigger: CAAAGGGGGCAGTTTCAGCCAGAATGTGGAACTCCT...GGATGTCTCTCCTTCCTTACTGTGGCTTCTGCATGCACTTACACTGTACTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | GCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTGCAAGAATCTCCTTGCATCGGTaGAATTCTGTGCCAGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ARLKNQRLAKGEFRTPARISLHR*NSVPGA Trigger: TGCCCCTGGCACAGAATTCCACCGATGCAAGGAGAT...TCTTGCAGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | TCCAAATGCCCTCTTCCCACAATAATACTGTGTTCACAATGTCATTTTCTAGGCAGTAAGTCTTCCAAGTaGCCCTGCCTGGTCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SKCPLPTIILCSQCHFLGSKSSK*PCLVSR Trigger: GCGGGAGACCAGGCAGGGTCACTTGGAAGACTTACT...GCCTAGAAAATGACATTGTGAACACAGTATTATTGTGGGAAGAGGGCATTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | AAGGGCATTCACCTTAACAAGCATGTCGGCCACGTGCATGTCACAAGCTCTTTCTATCTGAGAGGGTTGTaGGCAGTAAGTCTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KGIHLNKHVGHVHVTSSFYLRGL*AVSLPS Trigger: ACTTGGAAGACTTACTGCTCACAACCCTCTCAGATA...GAAAGAGCTTGTGACATGCACGTGGCCGACATGCTTGTTAAGGTGAATGCCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | AACTACCATAGGCCTCAAATTTGCTGGGCACTATGGAGATGTGAAAGAAGTTGTACCTTCCACACCATGTaGGAGGAGTGCCACTACGCA | + |
|
Preference number: 4 (lower is better) Translates to: NYHRPQICWALWRCERSCTFHTM*EECHYA Trigger: TGCGTAGTGGCACTCCTCTCACATGGTGTGGAAGGT...ACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | CCAGGAACCCCGTTTGGTGTTCCGCATGGCAGCATTACCTTTAAGGCAAGCATATTTTTCAGTGTTTCCTaGTGGTCAGGATGCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGTPFGVPHGSITFKASIFFSVS*WSGCIP Trigger: TGGAATGCATCCTGACCACCAGGAAACACTGAAAAA...TATGCTTGCCTTAAAGGTAATGCTGCCATGCGGAACACCAAACGGGGTTCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
||
| CDS-3UTR TCA 90 bp | TACAGCGTAAGTGGCAAGAAACATCCTACAAAGGACGGCTTCACAGACTTGGCATATCTGAGAGGGTTGTaGGCAGTAAGTCTTCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YSVSGKKHPTKDGFTDLAYLRGL*AVSLPS Trigger: ACTTGGAAGACTTACTGCTCACAACCCTCTCAGATA...TGCCAAGTCTGTGAAGCCGTCCTTTGTAGGATGTTTCTTGCCACTTACGCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR GCA 90 bp | AACTACCATAGGCCTCAAATTTGCTGGGCACTATGGAGATGTGAAAGAAGTTGTATCGGTGGAATTCTGTaGCAGGGGCATAGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NYHRPQICWALWRCERSCIGGIL*QGHSLH Trigger: GTGAAGGCTATGCCCCTGGCACAGAATTCCACCGAT...ACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR GCA 90 bp | AGCATTCAGCCTCAGAGGGAACAAGTGAAACAAGCAAAAGTGCCATTACAGCCTACTCAGACATCTCCTTaGATCGGTGGAATTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIQPQREQVKQAKVPLQPTQTSP*IGGILC Trigger: GCACAGAATTCCACCGATGCAAGGAGATGTCTGAGT...AGGCTGTAATGGCACTTTTGCTTGTTTCACTTGTTCCCTCTGAGGCTGAATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | TTCCCACTCTCTTGGAGCATTCAGCCTCAGAGGGAACAAGTGAAACAAGCAAAATTCAGTGTTTCCTGGTaGTCAGGATGCATTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FPLSWSIQPQREQVKQAKFSVSW*SGCIPH Trigger: GTGTGGAATGCATCCTGACCACCAGGAAACACTGAA...TTTTGCTTGTTTCACTTGTTCCCTCTGAGGCTGAATGCTCCAAGAGAGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | ACCACTTGGTTCATACAACAAACATTAGTTGAGCACCTCAACTACCATAGGCCTGTGACTAGAGTAGTGTaGTCCACATCCCCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TTWFIQQTLVEHLNYHRPVTRVV*STSPPE Trigger: CTCTGGAGGGGATGTGGACCACACTACTCTAGTCAC...AGGCCTATGGTAGTTGAGGTGCTCAACTAATGTTTGTTGTATGAACCAAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAATGCCCTCTTCCCACAATAATACTGTGTTCACAATGTCATTTTCTAGGCACCAGGAACCCCGTTTaGTGTTCCGCATGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKCPLPTIILCSQCHFLGTRNPV*CSAWQH Trigger: ATGCTGCCATGCGGAACACCAAACGGGGTTCCTGGT...GCCTAGAAAATGACATTGTGAACACAGTATTATTGTGGGAAGAGGGCATTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | CATTCAGTGACAGTTCAAACAAAGCATGACCAGGGAAATTTCTATGACTTCCAGTCTTTGGCAGCAGGTTaGGGAGTTCCACATTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HSVTVQTKHDQGNFYDFQSLAAG*GVPHSG Trigger: GCCAGAATGTGGAACTCCTCAACCTGCTGCCAAAGA...CTGGAAGTCATAGAAATTTCCCTGGTCATGCTTTGTTTGAACTGTCACTGAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
||
| CDS-3UTR TCA 90 bp | AACTACCATAGGCCTCAAATTTGCTGGGCACTATGGAGATGTGAAAGAAGTTGTGCCACATATCATGTCTaGGCGAGTAGGCAGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: NYHRPQICWALWRCERSCATYHV*ASRQSH Trigger: ATGAGACTGCCTACTCGCTCAGACATGATATGTGGC...ACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR GCA 90 bp | AGTTGCTGGCACAGAGTACTACAGTACTCAGACATCTCCTTGCATCGGTGGAATAGCACCTCCACGACATaGTTGGATGAAGAACATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SCWHRVLQYSDISLHRWNSTSTT*LDEEHF Trigger: AAAATGTTCTTCATCCAAGCATGTCGTGGAGGTGCT...ATTCCACCGATGCAAGGAGATGTCTGAGTACTGTAGTACTCTGTGCCAGCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| CDS-3UTR TCA 90 bp | AAGAGGGGCTGGAGCATAGTGAGAAATCACCATTTAATGAGATCCAAAGGGAAGAAAACCTCTTGGAGCTaGAGCAGTTTGCCATCTACA | + |
|
Preference number: 4 (lower is better) Translates to: KRGWSIVRNHHLMRSKGKKTSWS*SSLPST Trigger: TGTAGATGGCAAACTGCTTCAGCTCCAAGAGGTTTT...CTTCCCTTTGGATCTCATTAAATGGTGATTTCTCACTATGCTCCAGCCCCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR GCA 90 bp | ACCACTTGGTTCATACAACAAACATTAGTTGAGCACCTCAACTACCATAGGCCTCATCTACACCATAGATaGCACCTTCCACACCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTWFIQQTLVEHLNYHRPHLHHR*HLPHHV Trigger: CACATGGTGTGGAAGGTGGCATCTATGGTGTAGATG...AGGCCTATGGTAGTTGAGGTGCTCAACTAATGTTTGTTGTATGAACCAAGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR GCA 90 bp | TACAGCGTAAGTGGCAAGAAACATCCTACAAAGGACGGCTTCACAGACTTGGCACTCATCTCCACGACATaGTTGGATGAAGAACATTTT | + |
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Preference number: 4 (lower is better) Translates to: YSVSGKKHPTKDGFTDLALISTT*LDEEHF Trigger: AAAATGTTCTTCATCCAAGCATGTCGTGGAGATGAG...TGCCAAGTCTGTGAAGCCGTCCTTTGTAGGATGTTTCTTGCCACTTACGCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CCA 90 bp | CATTCAGTGACAGTTCAAACAAAGCATGACCAGGGAAATTTCTATGACTTCCAGCCAGGGGATTGTGTGTaGTTCTTTCCATCTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSVTVQTKHDQGNFYDFQPGDCV*FFPSCW Trigger: CCAGCAAGATGGAAAGAACCACACACAATCCCCTGG...CTGGAAGTCATAGAAATTTCCCTGGTCATGCTTTGTTTGAACTGTCACTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR GCA 90 bp | ACTTGGTTCATACAACAAACATTAGTTGAGCACCTCAACTACCATAGGCCTCAAGGTAAAACTCAGGAGTaGATGGCTTCACCAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TWFIQQTLVEHLNYHRPQGKTQE*MASPED Trigger: GTCTTCTGGTGAAGCCATGCACTCCTGAGTTTTACC...TTGAGGCCTATGGTAGTTGAGGTGCTCAACTAATGTTTGTTGTATGAACCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR GCA 90 bp | AACTACCATAGGCCTCAAATTTGCTGGGCACTATGGAGATGTGAAAGAAGTTGTTGGTTCTTTCCATCTTaGTGGTCGACACCTCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: NYHRPQICWALWRCERSCWFFPS*WSTPLS Trigger: AGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCA...ACAACTTCTTTCACATCTCCATAGTGCCCAGCAAATTTGAGGCCTATGGTAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CCA 90 bp | AAGAGGGGCTGGAGCATAGTGAGAAATCACCATTTAATGAGATCCAAAGGGAAGTTTTTCAGTGTTTCCTaGTGGTCAGGATGCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRGWSIVRNHHLMRSKGKFFSVS*WSGCIP Trigger: TGGAATGCATCCTGACCACCAGGAAACACTGAAAAA...CTTCCCTTTGGATCTCATTAAATGGTGATTTCTCACTATGCTCCAGCCCCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS TCA 90 bp | GGTCCACATCCCCTCCAGAGCGGAATTCCAGGTCTTTCTCTCCAGTaGAGTGCACATTGCTCAGCACCAGTGCCAAGCCACGGGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: GPHPLQSGIPGLSLQ*SAHCSAPVPSHGAE Trigger: CTCAGCCCCGTGGCTTGGCACTGGTGCTGAGCAATGTGCACTTCACTGGAGAGAAAGACCTGGAATTCCGCTCTGGAGGGGATGTGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 90 bp | GTGTTTCCTGGTGGTCAGGATGCATTCCACACACTGCCAAAATCCTaGTCCTCCTGTCAGCCGCCATCAGCCCCTTCCTGTGCAGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFPGGQDAFHTLPKS*SSCQPPSAPSCAGR Trigger: CCTCCCTGCACAGGAAGGGGCTGATGGCGGCTGACAGGAGGAGCAGGATTTTGGCAGTGTGTGGAATGCATCCTGACCACCAGGAAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CCA 90 bp | CCCTGCCTGGTCTCCCGCAGGGCTTCACAGAAGGCATCAAAAGCCTaGGGTCCTCTCTTTGGCAGCAGGTTGAGGAGTTCCACATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCLVSRRASQKASKA*GPLFGSRLRSSTFW Trigger: CCAGAATGTGGAACTCCTCAACCTGCTGCCAAAGAGAGGACCCCAGGCTTTTGATGCCTTCTGTGAAGCCCTGCGGGAGACCAGGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CCA 90 bp | GCCTGGGGTCCTCTCTTTGGCAGCAGGTTGAGGAGTTCCACATTCTaGCTGAAACTGCCCCCTTTGGCCTGGATGAGCTCCCTCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWGPLFGSRLRSSTF*LKLPPLAWMSSLIS Trigger: GGAAATGAGGGAGCTCATCCAGGCCAAAGGGGGCAGTTTCAGCCAGAATGTGGAACTCCTCAACCTGCTGCCAAAGAGAGGACCCCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS TCA 90 bp | CACAGCTCAACGGTGGGAGTACGTGCTGAATATCTGAGAGGGTTGTaGGCAGTAAGTCTTCCAAGTGACCCTGCCTGGTCTCCCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSSTVGVRAEYLRGL*AVSLPSDPAWSPAG Trigger: CCCTGCGGGAGACCAGGCAGGGTCACTTGGAAGACTTACTGCTCACAACCCTCTCAGATATTCAGCACGTACTCCCACCGTTGAGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS-3UTR CAA 90 bp | AACCATTCTGAAGAGAAGTCTCCATTGTGCCCCCAGTGGTCCAGTGGCCTCCAACTCAGCAGCAGCTGCTaGGCCAGCACCACTCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: NHSEEKSPLCPQWSSGLQLSSSC*ASTTRF Trigger: GAATCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGAG...TTGGAGGCCACTGGACCACTGGGGGCACAATGGAGACTTCTCTTCAGAATGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | TCGGTGGAATTCTGTGCCAGGGGCATAGCCTTCACGCTCCTTGATAAGGGCATTCTCAGCAGCAGCTGCTaGGCCAGCACCACTCGATTC | + |
|
Preference number: 5 (lower is better) Translates to: SVEFCARGIAFTLLDKGILSSSC*ASTTRF Trigger: GAATCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGAG...AATGCCCTTATCAAGGAGCGTGAAGGCTATGCCCCTGGCACAGAATTCCACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| CDS TCA 90 bp | AAGCAGTTTGCCATCTACACCATAGATGCCACCTTCCACACCATGTaGGAGGAGTGCCACTACGCAGGAGTCTGTGACCCGGTGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQFAIYTIDATFHTM*EECHYAGVCDPVCR Trigger: CCTGCACACCGGGTCACAGACTCCTGCGTAGTGGCACTCCTCTCACATGGTGTGGAAGGTGGCATCTATGGTGTAGATGGCAAACTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS TCA 90 bp | TCTAAGGAGTGTTCCGTAGCATCTGTGGATAGGCGGAGCTGCTTGTaGGGAGGGCAGGACTCACACACCGAGAAAGGGAGACTTGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SKECSVASVDRRSCL*GGQDSHTEKGRLVS Trigger: TGACACAAGTCTCCCTTTCTCGGTGTGTGAGTCCTGCCCTCCTCACAAGCAGCTCCGCCTATCCACAGATGCTACGGAACACTCCTTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 90 bp | TTCCAGGTCTTTCTCTCCAGTGAAGTGCACATTGCTCAGCACCAGTaGCAAGCCACGGGGCTGAGATTGCAACCTATAGGCCAGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FQVFLSSEVHIAQHQ*QATGLRLQPIGQLV Trigger: TACCAGCTGGCCTATAGGTTGCAATCTCAGCCCCGTGGCTTGGCACTGGTGCTGAGCAATGTGCACTTCACTGGAGAGAAAGACCTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS-3UTR CAA 90 bp | ACTCTCCTCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTTGCTGGTCGACCCAGTGAAGTGCACATaGCTCAGCACCAGTGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLLTSRGLCVVLSILLVDPVKCT*LSTSAK Trigger: CTTGGCACTGGTGCTGAGCAATGTGCACTTCACTGG...GTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| CDS-3UTR CAA 90 bp | GGTGAAGGTAAAGAGGGGAACCAGTACAAAGCAAGAGAGACCCTGGAGGCCAGCCTCACATCCAGGGGATaGTGTGTGGTTCTTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GEGKEGNQYKARETLEASLTSRG*CVVLSI Trigger: GATGGAAAGAACCACACACAATCCCCTGGATGTGAG...GCTGGCCTCCAGGGTCTCTCTTGCTTTGTACTGGTTCCCCTCTTTACCTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS GCA 90 bp | ATGTCCTTCTCTAGGAGGTGTTCTAACAGCTCGCTCAGCAGCAGCTaGTTGGCCAGCACCACTCGATTCTTTTTCAGTGTTTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MSFSRRCSNSSLSSS*LASTTRFFFSVSWW Trigger: CCACCAGGAAACACTGAAAAAGAATCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGAGCGAGCTGTTAGAACACCTCCTAGAGAAGGACAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CCA 90 bp | AGCTGCTTGGCCAGCACCACTCGATTCTTTTTCAGTGTTTCCTGGTaGTCAGGATGCATTCCACACACTGCCAAAATCCTGCTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SCLASTTRFFFSVSW*SGCIPHTAKILLLL Trigger: CAGGAGGAGCAGGATTTTGGCAGTGTGTGGAATGCATCCTGACCACCAGGAAACACTGAAAAAGAATCGAGTGGTGCTGGCCAAGCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CCA 90 bp | AGCAGCTGCTTGGCCAGCACCACTCGATTCTTTTTCAGTGTTTCCTaGTGGTCAGGATGCATTCCACACACTGCCAAAATCCTGCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSCLASTTRFFFSVS*WSGCIPHTAKILLL Trigger: GAGGAGCAGGATTTTGGCAGTGTGTGGAATGCATCCTGACCACCAGGAAACACTGAAAAAGAATCGAGTGGTGCTGGCCAAGCAGCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS-3UTR CAA 90 bp | AGCTCTTTCAGAGAACACCTGAGTGAGGGCCTCAATGTACCAGGAACCCCGTTTCTCTTTGGCAGCAGGTaGAGGAGTTCCACATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFREHLSEGLNVPGTPFLFGSR*RSSTFW Trigger: CCAGAATGTGGAACTCCTCAACCTGCTGCCAAAGAG...AAACGGGGTTCCTGGTACATTGAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| CDS TCA 90 bp | CACCTTCCACACCATGTGAGAGGAGTGCCACTACGCAGGAGTCTGTaGCCCGGTGTGCAGGTAACTGTGCAAAATTCTGAAGTTTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLPHHVRGVPLRRSL*PGVQVTVQNSEVSL Trigger: AAGAGAAACTTCAGAATTTTGCACAGTTACCTGCACACCGGGTCACAGACTCCTGCGTAGTGGCACTCCTCTCACATGGTGTGGAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 90 bp | GCAACCTATAGGCCAGCTGGTAGTGTGCCTGGTAAAACTCAGGAGTaGATGGCTTCACCAGAAGACAGGGAGGACCATCACCATTATCTA | + |
|
Preference number: 5 (lower is better) Translates to: ATYRPAGSVPGKTQE*MASPEDREDHHHYL Trigger: TAGATAATGGTGATGGTCCTCCCTGTCTTCTGGTGAAGCCATGCACTCCTGAGTTTTACCAGGCACACTACCAGCTGGCCTATAGGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 90 bp | GAAAAACCTCTTGGAGCTGAAGCAGTTTGCCATCTACACCATAGATaGCACCTTCCACACCATGTGAGAGGAGTGCCACTACGCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EKPLGAEAVCHLHHR*HLPHHVRGVPLRRS Trigger: ACTCCTGCGTAGTGGCACTCCTCTCACATGGTGTGGAAGGTGGCATCTATGGTGTAGATGGCAAACTGCTTCAGCTCCAAGAGGTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 90 bp | TCACTCTCCTCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTTaGTGGTCGACACCTCTATCTGTCTCATCTCCACGACATGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSHPGDCVWFFPS*WSTPLSVSSPRHAW Trigger: CCAAGCATGTCGTGGAGATGAGACAGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS CCA 90 bp | CTCTCCTCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTTGCTaGTCGACACCTCTATCTGTCTCATCTCCACGACATGCTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LSSHPGDCVWFFPSC*STPLSVSSPRHAWM Trigger: CATCCAAGCATGTCGTGGAGATGAGACAGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | GCCTCCGCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTCTCTTTGGCAGCAGGTaGAGGAGTTCCACATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASARLKNQRLAKGEFRTPLFGSR*RSSTFW Trigger: CCAGAATGTGGAACTCCTCAACCTGCTGCCAAAGAG...AGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGCGGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | GTCAAGTACAGTGTAAGTGCATGCAGAAGCCACAGTAAGGAAGGAGAGACATCCCCAGTGAAGTGCACATaGCTCAGCACCAGTGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VKYSVSACRSHSKEGETSPVKCT*LSTSAK Trigger: CTTGGCACTGGTGCTGAGCAATGTGCACTTCACTGG...GGATGTCTCTCCTTCCTTACTGTGGCTTCTGCATGCACTTACACTGTACTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS TCA 90 bp | ACGCAGGAGTCTGTGACCCGGTGTGCAGGTAACTGTGCAAAATTCTaGAGTTTCTCTTGCATTTCCTGTGCGGTCTGGTCATGTAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: TQESVTRCAGNCAKF*SFSCISCAVWSCST Trigger: TGTGCTACATGACCAGACCGCACAGGAAATGCAAGAGAAACTTCAGAATTTTGCACAGTTACCTGCACACCGGGTCACAGACTCCTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CCA 90 bp | TCCTCTTTGCCAGCATCACTCTCCTCACATCCAGGGGATTGTGTGTaGTTCTTTCCATCTTGCTGGTCGACACCTCTATCTGTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLPASLSSHPGDCV*FFPSCWSTPLSVSS Trigger: AGATGAGACAGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGTGATGCTGGCAAAGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | GCCTCCGCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTTTCATCAACTCCTCTTaGCCAGCATCACTCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASARLKNQRLAKGEFRTPFINSS*PASLSS Trigger: TGAGGAGAGTGATGCTGGCAAAGAGGAGTTGATGAA...AGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGCGGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | AGCTCTTTCAGAGAACACCTGAGTGAGGGCCTCAATGTACCAGGAACCCCGTTTACCTCCACGACATGCTaGGATGAAGAACATTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFREHLSEGLNVPGTPFTSTTC*DEEHFW Trigger: CCAAAAATGTTCTTCATCCAAGCATGTCGTGGAGGT...AAACGGGGTTCCTGGTACATTGAGGCCCTCACTCAGGTGTTCTCTGAAAGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| CDS-3UTR CAA 90 bp | GCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTGCAAGACCGAGAAAGGGAGACTaGTGTCATAGTCACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARLKNQRLAKGEFRTPARPRKGD*CHSHSS Trigger: TGAGCTGTGACTATGACACAAGTCTCCCTTTCTCGG...TCTTGCAGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | GCACAGAGTACTACAGTACTCAGACATCTCCTTGCATCGGTGGAATTCTGTGCCATTCTGAAGTTTCTCTaGCATTTCCTGTGCGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQSTTVLRHLLASVEFCAILKFL*HFLCGL Trigger: CAGACCGCACAGGAAATGCAAGAGAAACTTCAGAAT...GGCACAGAATTCCACCGATGCAAGGAGATGTCTGAGTACTGTAGTACTCTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156829.8 |
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| CDS-3UTR CAA 90 bp | ACTTGGTTCATACAACAAACATTAGTTGAGCACCTCAACTACCATAGGCCTCAATACCAGGAACCCCGTTaGGTGTTCCGCATGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TWFIQQTLVEHLNYHRPQYQEPR*VFRMAA Trigger: TGCTGCCATGCGGAACACCAAACGGGGTTCCTGGTA...TTGAGGCCTATGGTAGTTGAGGTGCTCAACTAATGTTTGTTGTATGAACCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | GCTGTAGCTAAAATGCTTCTGGTAACACATCCATTCAGAGCTGGCTCTATAGGTGTGGTTCTTTCCATCTaGCTGGTCGACACCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: AVAKMLLVTHPFRAGSIGVVLSI*LVDTSI Trigger: GATAGAGGTGTCGACCAGCAAGATGGAAAGAACCAC...ACCTATAGAGCCAGCTCTGAATGGATGTGTTACCAGAAGCATTTTAGCTACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | GCCAGACTCAAAAATCAGAGACTAGCCAAAGGAGAGTTCAGAACACCTGCAAGAATCTCCACGACATGCTaGGATGAAGAACATTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARLKNQRLAKGEFRTPARISTTC*DEEHFW Trigger: CCAAAAATGTTCTTCATCCAAGCATGTCGTGGAGAT...TCTTGCAGGTGTTCTGAACTCTCCTTTGGCTAGTCTCTGATTTTTGAGTCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | ATTTGGCACCTGATGGCAATACAAAATCTTGGCAGTGGGAAGTGTGAAGATTCTTACTCAGACATCTCCTaGCATCGGTGGAATTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IWHLMAIQNLGSGKCEDSYSDIS*HRWNSV Trigger: CACAGAATTCCACCGATGCAAGGAGATGTCTGAGTA...AGAATCTTCACACTTCCCACTGCCAAGATTTTGTATTGCCATCAGGTGCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS-3UTR CAA 90 bp | TCCAAATGCCCTCTTCCCACAATAATACTGTGTTCACAATGTCATTTTCTAGGCATTCTGAAGTTTCTCTaGCATTTCCTGTGCGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SKCPLPTIILCSQCHFLGILKFL*HFLCGL Trigger: CAGACCGCACAGGAAATGCAAGAGAAACTTCAGAAT...GCCTAGAAAATGACATTGTGAACACAGTATTATTGTGGGAAGAGGGCATTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS GCA 72 bp | GGTGGTCAGGATGCATTCCACACACTGCCAAAATCCTaGTCCTCCTGTCAGCCGCCATCAGCCCCTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GGQDAFHTLPKS*SSCQPPSAPSC Trigger: ACAGGAAGGGGCTGATGGCGGCTGACAGGAGGAGCAGGATTTTGGCAGTGTGTGGAATGCATCCTGACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS TCA 72 bp | TGTTCCGTAGCATCTGTGGATAGGCGGAGCTGCTTGTaGGGAGGGCAGGACTCACACACCGAGAAAGGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CSVASVDRRSCL*GGQDSHTEKGR Trigger: TCTCCCTTTCTCGGTGTGTGAGTCCTGCCCTCCTCACAAGCAGCTCCGCCTATCCACAGATGCTACGGAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS TCA 72 bp | GCCATCTACACCATAGATGCCACCTTCCACACCATGTaGGAGGAGTGCCACTACGCAGGAGTCTGTGACCCG | + |
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Preference number: 6 (lower is better) Translates to: AIYTIDATFHTM*EECHYAGVCDP Trigger: CGGGTCACAGACTCCTGCGTAGTGGCACTCCTCTCACATGGTGTGGAAGGTGGCATCTATGGTGTAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CCA 72 bp | CCTCTCTTTGGCAGCAGGTTGAGGAGTTCCACATTCTaGCTGAAACTGCCCCCTTTGGCCTGGATGAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PLFGSRLRSSTF*LKLPPLAWMSS Trigger: GGAGCTCATCCAGGCCAAAGGGGGCAGTTTCAGCCAGAATGTGGAACTCCTCAACCTGCTGCCAAAGAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CAA 72 bp | ATTGCTCAGCACCAGTGCCAAGCCACGGGGCTGAGATaGCAACCTATAGGCCAGCTGGTAGTGTGCCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: IAQHQCQATGLR*QPIGQLVVCLV Trigger: TACCAGGCACACTACCAGCTGGCCTATAGGTTGCAATCTCAGCCCCGTGGCTTGGCACTGGTGCTGAGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CAA 90 bp | GAAGTGCACATTGCTCAGCACCAGTGCCAAGCCACGGGGCTGAGATaGCAACCTATAGGCCAGCTGGTAGTGTGCCTGGTAAAACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: EVHIAQHQCQATGLR*QPIGQLVVCLVKLR Trigger: CCTGAGTTTTACCAGGCACACTACCAGCTGGCCTATAGGTTGCAATCTCAGCCCCGTGGCTTGGCACTGGTGCTGAGCAATGTGCACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 72 bp | CAGTGTTTCCTGGTGGTCAGGATGCATTCCACACACTaGCAAAATCCTGCTCCTCCTGTCAGCCGCCATCAG | + |
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Preference number: 6 (lower is better) Translates to: QCFLVVRMHSTH*QNPAPPVSRHQ Trigger: CTGATGGCGGCTGACAGGAGGAGCAGGATTTTGGCAGTGTGTGGAATGCATCCTGACCACCAGGAAACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 72 bp | AGGCCAGCTGGTAGTGTGCCTGGTAAAACTCAGGAGTaGATGGCTTCACCAGAAGACAGGGAGGACCATCAC | + |
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Preference number: 6 (lower is better) Translates to: RPAGSVPGKTQE*MASPEDREDHH Trigger: GTGATGGTCCTCCCTGTCTTCTGGTGAAGCCATGCACTCCTGAGTTTTACCAGGCACACTACCAGCTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CAA 72 bp | GAGGAGGGCAGGACTCACACACCGAGAAAGGGAGACTaGTGTCATAGTCACAGCTCAACGGTGGGAGTACGT | + |
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Preference number: 6 (lower is better) Translates to: EEGRTHTPRKGD*CHSHSSTVGVR Trigger: ACGTACTCCCACCGTTGAGCTGTGACTATGACACAAGTCTCCCTTTCTCGGTGTGTGAGTCCTGCCCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS TCA 72 bp | ATATCTGAGAGGGTTGTGAGCAGTAAGTCTTCCAAGTaGCCCTGCCTGGTCTCCCGCAGGGCTTCACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: ISERVVSSKSSK*PCLVSRRASQK Trigger: CTTCTGTGAAGCCCTGCGGGAGACCAGGCAGGGTCACTTGGAAGACTTACTGCTCACAACCCTCTCAGATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 72 bp | GGGCTGAGATTGCAACCTATAGGCCAGCTGGTAGTGTaGCTGGTAAAACTCAGGAGTGCATGGCTTCACCAG | + |
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Preference number: 6 (lower is better) Translates to: GLRLQPIGQLVV*LVKLRSAWLHQ Trigger: CTGGTGAAGCCATGCACTCCTGAGTTTTACCAGGCACACTACCAGCTGGCCTATAGGTTGCAATCTCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 72 bp | TTTCTCTCCAGTGAAGTGCACATTGCTCAGCACCAGTaGCAAGCCACGGGGCTGAGATTGCAACCTATAGGC | + |
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Preference number: 6 (lower is better) Translates to: FLSSEVHIAQHQ*QATGLRLQPIG Trigger: GCCTATAGGTTGCAATCTCAGCCCCGTGGCTTGGCACTGGTGCTGAGCAATGTGCACTTCACTGGAGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CAA 90 bp | GCTGCTTGTGAGGAGGGCAGGACTCACACACCGAGAAAGGGAGACTaGTGTCATAGTCACAGCTCAACGGTGGGAGTACGTGCTGAATAT | + |
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Preference number: 6 (lower is better) Translates to: AACEEGRTHTPRKGD*CHSHSSTVGVRAEY Trigger: ATATTCAGCACGTACTCCCACCGTTGAGCTGTGACTATGACACAAGTCTCCCTTTCTCGGTGTGTGAGTCCTGCCCTCCTCACAAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS TCA 72 bp | ACGGTGGGAGTACGTGCTGAATATCTGAGAGGGTTGTaGGCAGTAAGTCTTCCAAGTGACCCTGCCTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: TVGVRAEYLRGL*AVSLPSDPAWS Trigger: AGACCAGGCAGGGTCACTTGGAAGACTTACTGCTCACAACCCTCTCAGATATTCAGCACGTACTCCCACCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS TCA 72 bp | CACCATGTGAGAGGAGTGCCACTACGCAGGAGTCTGTaGCCCGGTGTGCAGGTAACTGTGCAAAATTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: HHVRGVPLRRSL*PGVQVTVQNSE Trigger: TTCAGAATTTTGCACAGTTACCTGCACACCGGGTCACAGACTCCTGCGTAGTGGCACTCCTCTCACATGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CAA 72 bp | AGGAGGTGTTCTAACAGCTCGCTCAGCAGCAGCTGCTaGGCCAGCACCACTCGATTCTTTTTCAGTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: RRCSNSSLSSSC*ASTTRFFFSVS Trigger: GGAAACACTGAAAAAGAATCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGAGCGAGCTGTTAGAACACCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CAA 90 bp | TCCTTCTCTAGGAGGTGTTCTAACAGCTCGCTCAGCAGCAGCTGCTaGGCCAGCACCACTCGATTCTTTTTCAGTGTTTCCTGGTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SFSRRCSNSSLSSSC*ASTTRFFFSVSWWS Trigger: TGACCACCAGGAAACACTGAAAAAGAATCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGAGCGAGCTGTTAGAACACCTCCTAGAGAAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS GCA 72 bp | TCTAGGAGGTGTTCTAACAGCTCGCTCAGCAGCAGCTaGTTGGCCAGCACCACTCGATTCTTTTTCAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SRRCSNSSLSSS*LASTTRFFFSV Trigger: AACACTGAAAAAGAATCGAGTGGTGCTGGCCAAGCAGCTGCTGCTGAGCGAGCTGTTAGAACACCTCCTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CAA 72 bp | CTCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTaGCTGGTCGACACCTCTATCTGTCTCATCTCCACG | + |
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Preference number: 6 (lower is better) Translates to: LTSRGLCVVLSI*LVDTSICLIST Trigger: CGTGGAGATGAGACAGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS CAA 90 bp | ATCACTCTCCTCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTaGCTGGTCGACACCTCTATCTGTCTCATCTCCACGACATGCTTG | + |
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Preference number: 6 (lower is better) Translates to: ITLLTSRGLCVVLSI*LVDTSICLISTTCL Trigger: CAAGCATGTCGTGGAGATGAGACAGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGAGGAGAGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS GCA 72 bp | TCACATCCAGGGGATTGTGTGTGGTTCTTTCCATCTTaGTGGTCGACACCTCTATCTGTCTCATCTCCACGA | + |
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Preference number: 6 (lower is better) Translates to: SHPGDCVWFFPS*WSTPLSVSSPR Trigger: TCGTGGAGATGAGACAGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS CCA 72 bp | GCCAGCACCACTCGATTCTTTTTCAGTGTTTCCTGGTaGTCAGGATGCATTCCACACACTGCCAAAATCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASTTRFFFSVSW*SGCIPHTAKIL Trigger: CAGGATTTTGGCAGTGTGTGGAATGCATCCTGACCACCAGGAAACACTGAAAAAGAATCGAGTGGTGCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031895.13 ENSMUST00000156829.8 |
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| CDS CCA 72 bp | CATCCAGGGGATTGTGTGTGGTTCTTTCCATCTTGCTaGTCGACACCTCTATCTGTCTCATCTCCACGACAT | + |
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Preference number: 6 (lower is better) Translates to: HPGDCVWFFPSC*STPLSVSSPRH Trigger: ATGTCGTGGAGATGAGACAGATAGAGGTGTCGACCAGCAAGATGGAAAGAACCACACACAATCCCCTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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| CDS CAA 90 bp | TCTGTCTCATCTCCACGACATGCTTGGATGAAGAACATTTTTGGCTaGTTCTGTAGACTTGGACAGTTAGCATTGTCAAAAAGTCGAAAA | + |
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Preference number: 6 (lower is better) Translates to: SVSSPRHAWMKNIFG*FCRLGQLALSKSRK Trigger: TTTTCGACTTTTTGACAATGCTAACTGTCCAAGTCTACAGAACAAGCCAAAAATGTTCTTCATCCAAGCATGTCGTGGAGATGAGACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031895.13 |
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