Pregenerated sensors for CASP14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005355Ensembl transcript IDs: ENSMUST00000005488.9, ENSMUST00000219237.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTCAGAAAGCTACTACCTCTGAATTAGAAATGACTATTTTCGGTTaGGTCATAGGAGGGAGAGTAAGGCGTGGTGAGGCAAAAGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: VQKATTSELEMTIFG*VIGGRVRRGEAKEQ Trigger: TTGCTCTTTTGCCTCACCACGCCTTACTCTCCCTCCTATGACTCAACCGAAAATAGTCATTTCTAATTCAGAGGTAGTAGCTTTCTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCGAGAGTAAGGCGTGGTaGGGCAAAAGAGCAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPESKAW*GKRANS Trigger: ACTGTTTGCTCTTTTGCCTCACCACGCCTTACTCTC...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCTCCAGTAACCATCTTTaGAGACTGGTGTCAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPSSNHL*RLVSTE Trigger: CTCTGTTGACACCAGTCTTCAAAGATGGTTACTGGA...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCACTGGAGGGGAAGGGCTaGTCAAGTCCTTTGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: KGTEAWGEDANISGRMNSLEGKG*SSPLGF Trigger: AAAACCCAAAGGACTTGAGCAGCCCTTCCCCTCCAG...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCTTGTACTTCCTGCCTTaGCTTCTTCACAATGACGAA | + |
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Preference number: 2 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPLYFLP*LLHNDE Trigger: TTCGTCATTGTGAAGAAGTCAAGGCAGGAAGTACAA...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR GCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGCTGGAGGGGAAGGGCTaGTCAAGTCCTTTGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMLEGKG*SSPLGF Trigger: AAAACCCAAAGGACTTGAGCAGCCCTTCCCCTCCAG...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGTGTGCTCTAGCTGGCTaGCTTGCCCTGAAACTGACA | + |
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Preference number: 2 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMCALAG*LALKLT Trigger: TGTCAGTTTCAGGGCAAGCCAGCCAGCTAGAGCACA...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCATCCAGTAACCATCTTTaGAGACTGGTGTCAACAGAG | + |
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Preference number: 2 (lower is better) Translates to: KGTEAWGEDANISGRMNSSSNHL*RLVSTE Trigger: CTCTGTTGACACCAGTCTTCAAAGATGGTTACTGGA...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCAGGTGTGACTGTTTCATaGTCCAGTTCTTTGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: KGTEAWGEDANISGRMNSGVTVS*SSSLIL Trigger: CAAAATCAAAGAACTGGAGCATGAAACAGTCACACC...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGTTGTACTTCCTGCCTTaGCTTCTTCACAATGACGAA | + |
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Preference number: 2 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMLYFLP*LLHNDE Trigger: TTCGTCATTGTGAAGAAGTCAAGGCAGGAAGTACAA...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTTGTGCTCTAGCTGGCTaGCTTGCCCTGAAACTGACA | + |
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Preference number: 2 (lower is better) Translates to: KNIYSVMSLMVVLPALTSCALAG*LALKLT Trigger: TGTCAGTTTCAGGGCAAGCCAGCCAGCTAGAGCACA...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTGATAAGGCTAGTAGCTaGAGGGGAAGGGCTGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCDKASS*RGRAAQ Trigger: TTGAGCAGCCCTTCCCCTCCAGCTACTAGCCTTATC...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTGAGAGTAAGGCGTGGTaGGGCAAAAGAGCAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCESKAW*GKRANS Trigger: ACTGTTTGCTCTTTTGCCTCACCACGCCTTACTCTC...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR GCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGGGTGTGACTGTTTCATaGTCCAGTTCTTTGATTTTG | + |
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Preference number: 2 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMGVTVS*SSSLIL Trigger: CAAAATCAAAGAACTGGAGCATGAAACAGTCACACC...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR CAA 90 bp | CAATTAAAAGTATACATAGATATTTCGACTAAGAGTGCGTGTGTGTaGGTCATGCTTGGTCTGAAGATGCTGCTGAGATCACCAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: QLKVYIDISTKSACV*VMLGLKMLLRSPEM Trigger: CATCTCTGGTGATCTCAGCAGCATCTTCAGACCAAGCATGACCAACACACACGCACTCTTAGTCGAAATATCTATGTATACTTTTAATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTTGTGTTGGTCATGCTTaGTCTGAAGATGCTGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCCVGHA*SEDAAE Trigger: CTCAGCAGCATCTTCAGACCAAGCATGACCAACACA...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR TCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTATGACTATTTTCGGTTaGGTCATAGGAGGGAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCMTIFG*VIGGRV Trigger: TACTCTCCCTCCTATGACTCAACCGAAAATAGTCAT...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTTTAGCTGGAGGTTATTaGAAGTTTCTAGAAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCLAGGY*KFLEMV Trigger: AACCATTTCTAGAAACTTCCAATAACCTCCAGCTAA...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTTTAGCTGGAGGTTATTaGAAGTTTCTAGAAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: KNIYSVMSLMVVLPALTSLAGGY*KFLEMV Trigger: AACCATTTCTAGAAACTTCCAATAACCTCCAGCTAA...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR CCA 72 bp | GGAGGCATGGCATCTTCTTCCTTGGGACGCACCCTTTaGGATAAGGCTAGTAGCTGGAGGGGAAGGGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GGMASSSLGRTL*DKASSWRGRAA Trigger: AGCAGCCCTTCCCCTCCAGCTACTAGCCTTATCCCAAAGGGTGCGTCCCAAGGAAGAAGATGCCATGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR CCA 72 bp | TCCTTGGGACGCACCCTTTGGGATAAGGCTAGTAGCTaGAGGGGAAGGGCTGCTCAAGTCCTTTGGGTTTTT | + |
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Preference number: 3 (lower is better) Translates to: SLGRTLWDKASS*RGRAAQVLWVF Trigger: AAAAACCCAAAGGACTTGAGCAGCCCTTCCCCTCCAGCTACTAGCCTTATCCCAAAGGGTGCGTCCCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR CCA 72 bp | CCATGTGGGACACCTAAGCTTAGAGAACTGGTCAATTaGGCAAGGGCACAGAGGCATGGGGAGAGGATGCTA | + |
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Preference number: 3 (lower is better) Translates to: PCGTPKLRELVN*ARAQRHGERML Trigger: TAGCATCCTCTCCCCATGCCTCTGTGCCCTTGCCCAATTGACCAGTTCTCTAAGCTTAGGTGTCCCACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR CCA 72 bp | CTGCTGAGATCACCAGAGATGTCAGGACCACTAACATaGCGTCTTCTTCCTTGGGACATGCCCTTTGGGATA | + |
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Preference number: 3 (lower is better) Translates to: LLRSPEMSGPLT*RLLPWDMPFGI Trigger: TATCCCAAAGGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGATCTCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CAA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCCTTAGCTGGAGGTTATaGGAAGTTTCTAGAAATGGT | + |
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Preference number: 3 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPLSWRL*EVSRNG Trigger: ACCATTTCTAGAAACTTCCAATAACCTCCAGCTAAG...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCACTAGCTCATGGGGTTTaGGAGAGGAATAAAGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: KGTEAWGEDANISGRMNSLAHGV*ERNKES Trigger: AGACTCTTTATTCCTCTCCAAAACCCCATGAGCTAG...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR TCA 72 bp | GCTACTACCTCTGAATTAGAAATGACTATTTTCGGTTaGGTCATAGGAGGGAGAGTAAGGCGTGGTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: ATTSELEMTIFG*VIGGRVRRGEA Trigger: TGCCTCACCACGCCTTACTCTCCCTCCTATGACTCAACCGAAAATAGTCATTTCTAATTCAGAGGTAGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR CCA 72 bp | AAAAACCCCACAGTGGCGATCTTAGCTGGAGGTTATTaGAAGTTTCTAGAAATGGTTCAGAAAGCTACTACC | + |
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Preference number: 3 (lower is better) Translates to: KNPTVAILAGGY*KFLEMVQKATT Trigger: GGTAGTAGCTTTCTGAACCATTTCTAGAAACTTCCAATAACCTCCAGCTAAGATCGCCACTGTGGGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CAA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTCTAGCTCATGGGGTTTaGGAGAGGAATAAAGAGTCT | + |
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Preference number: 3 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCLAHGV*ERNKES Trigger: AGACTCTTTATTCCTCTCCAAAACCCCATGAGCTAG...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR-3UTR CAA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTCTTAGCTGGAGGTTATaGGAAGTTTCTAGAAATGGT | + |
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Preference number: 3 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCLSWRL*EVSRNG Trigger: ACCATTTCTAGAAACTTCCAATAACCTCCAGCTAAG...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR TCA 72 bp | GAAGTTTCTAGAAATGGTTCAGAAAGCTACTACCTCTaGATTAGAAATGACTATTTTCGGTTGAGTCATAGG | + |
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Preference number: 3 (lower is better) Translates to: EVSRNGSESYYL*IRNDYFRLSHR Trigger: CCTATGACTCAACCGAAAATAGTCATTTCTAATTCAGAGGTAGTAGCTTTCTGAACCATTTCTAGAAACTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR TCA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCCCTCCCGGGCTTTGGTaGCACACAGCGTCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPPPGLW*HTASGP Trigger: TGGCCCTGACGCTGTGTGTCACCAAAGCCCGGGAGG...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR TCA 90 bp | GACGCACCCTTTGGGATAAGGCTAGTAGCTGGAGGGGAAGGGCTGCTCAAGTCCGGCCAGGCGGGCACCTaGCATATCATATCTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: DAPFGIRLVAGGEGLLKSGQAGT*HIISFL Trigger: GAGGAAAGATATGATATGTCAGGTGCCCGCCTGGCC...GGACTTGAGCAGCCCTTCCCCTCCAGCTACTAGCCTTATCCCAAAGGGTGCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR TCA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCCCTCACCATGTGCCATaGGTACCACAAAGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPPHHVP*VPQRHS Trigger: GCTGTGCCTTTGTGGTACTCATGGCACATGGTGAGG...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR GCA 90 bp | GACGCACCCTTTGGGATAAGGCTAGTAGCTGGAGGGGAAGGGCTGCTCAAGTCCTGCCTCTCAGGGCCTTaGAGTTCTTGTTGTTCAAGA | + |
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Preference number: 4 (lower is better) Translates to: DAPFGIRLVAGGEGLLKSCLSGP*SSCCSR Trigger: TCTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCA...GGACTTGAGCAGCCCTTCCCCTCCAGCTACTAGCCTTATCCCAAAGGGTGCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR TCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGCCTCCCGGGCTTTGGTaGCACACAGCGTCAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMPPGLW*HTASGP Trigger: TGGCCCTGACGCTGTGTGTCACCAAAGCCCGGGAGG...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR TCA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCTCTCATCTTCTCCCTTaGGGAGGCCTTCCTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPSHLLP*GGLPHH Trigger: ATGGTGAGGAAGGCCTCCTCAAGGGAGAAGATGAGA...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR CCA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCTCTCCTCTACAAGCCTaGATGATGTACACCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPSPLQA*MMYTFG Trigger: GCCAAAGGTGTACATCATCCAGGCTTGTAGAGGAGA...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| 3UTR CAA 72 bp | AGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTaGGGACATGCCCTTTGGGATAAGGCTAGTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RDVRTTNMASSS*GHALWDKASSW Trigger: CCAGCTACTAGCCTTATCCCAAAGGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR GCA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCATGTACACCTTTGGCTTaGCTCTCAGGGCCTTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KGTEAWGEDANISGRMNSCTPLA*LSGPCS Trigger: ACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACA...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR TCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGCCTCACCATGTGCCATaGGTACCACAAAGGCACAGC | + |
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Preference number: 4 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMPHHVP*VPQRHS Trigger: GCTGTGCCTTTGTGGTACTCATGGCACATGGTGAGG...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR CCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGGAAATTGCTGGGCGGTaGGATCCCTCTTCATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMEIAGR*DPSSWC Trigger: GCACCATGAAGAGGGATCCCACCGCCCAGCAATTTC...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR CCA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCAGATGATGTACACCTTTaGCTTGCCTCTCAGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: KGTEAWGEDANISGRMNSDDVHL*LASQGL Trigger: AAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCATC...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR CCA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCATTCCGGAGGGTGCTTTaGACTTCAGGGTTCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: KGTEAWGEDANISGRMNSFRRVL*TSGFTF Trigger: GAAAGTGAACCCTGAAGTCCAAAGCACCCTCCGGAA...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR GCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGAACTCTTCCAGAAATTaGTGGGCGGTGGGATCCCTC | + |
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Preference number: 4 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMNSSRN*WAVGSL Trigger: GAGGGATCCCACCGCCCAGCAATTTCTGGAAGAGTT...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR GCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGGCTTCTTCCGGAGGGTaGTTTGGACTTCAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMASSGG*FGLQGS Trigger: TGAACCCTGAAGTCCAAAGCACCCTCCGGAAGAAGC...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGGGTACCCCTCTACCGTaGAGTAGATGTGGAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMGTPLP*SRCGGY Trigger: ATACCCTCCACATCTACTCCACGGTAGAGGGGTACC...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGCTTGGTTTTCCTTCCTaGATCACCTCCGTGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMLGFPS*ITSVFA Trigger: GGCAAACACGGAGGTGATGCAGGAAGGAAAACCAAG...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCAAAAGGTCTTCTAGTCTaGCCATCTTCTCATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGTEAWGEDANISGRMNSKGLLV*PSSHLL Trigger: GAGAAGATGAGAAGATGGTCAGACTAGAAGACCTTT...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR TCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTGGCCAGGCGGGCACCTaGCATATCATATCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCGQAGT*HIISFL Trigger: GAGGAAAGATATGATATGTCAGGTGCCCGCCTGGCC...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR TCA 90 bp | GAAGAAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTCTCATCTTCTCCCTTaGGGAGGCCTTCCTCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: EEEYLFCDVTHGCTSCLDSHLLP*GGLPHH Trigger: ATGGTGAGGAAGGCCTCCTCAAGGGAGAAGATGAGA...GTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | AAGGGCACAGAGGCATGGGGAGAGGATGCTAACATTTCTGGGAGAATGAATTCAGATCCCTCTTCATGGTaGTTTCAAATTTCAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGTEAWGEDANISGRMNSDPSSW*FQISGN Trigger: GTTACCTGAAATTTGAAAGCACCATGAAGAGGGATC...TGAATTCATTCTCCCAGAAATGTTAGCATCCTCTCCCCATGCCTCTGTGCCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTGAAATTGCTGGGCGGTaGGATCCCTCTTCATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KNIYSVMSLMVVLPALTSEIAGR*DPSSWC Trigger: GCACCATGAAGAGGGATCCCACCGCCCAGCAATTTC...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CCA 90 bp | GAAGAAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACACATCCGTCAGGGTCTaGATGAAGCCAGAGCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEEYLFCDVTHGCTSCLDTSVRV*MKPEPF Trigger: GAAAGGCTCTGGCTTCATCCAGACCCTGACGGATGT...GTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTTCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR TCA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGAAAGGTCTTCTAGTCTaGCCATCTTCTCATCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMKGLLV*PSSHLL Trigger: GAGAAGATGAGAAGATGGTCAGACTAGAAGACCTTT...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTAACTCTTCCAGAAATTaGTGGGCGGTGGGATCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCNSSRN*WAVGSL Trigger: GAGGGATCCCACCGCCCAGCAATTTCTGGAAGAGTT...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTGCCTTCCTCACCATGTaGCATGAGTACCACAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCAFLTM*HEYHKG Trigger: GCCTTTGTGGTACTCATGGCACATGGTGAGGAAGGC...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTTGTACACCTTTGGCTTaGCTCTCAGGGCCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KNIYSVMSLMVVLPALTSCTPLA*LSGPCS Trigger: ACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACA...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTGCTTCTTCCGGAGGGTaGTTTGGACTTCAGGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KNIYSVMSLMVVLPALTSASSGG*FGLQGS Trigger: TGAACCCTGAAGTCCAAAGCACCCTCCGGAAGAAGC...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTGGTACCCCTCTACCGTaGAGTAGATGTGGAGGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KNIYSVMSLMVVLPALTSGTPLP*SRCGGY Trigger: ATACCCTCCACATCTACTCCACGGTAGAGGGGTACC...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR TCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTCCACAAAGGCACAGCTaGCAGGCTCTTCCCAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: KNIYSVMSLMVVLPALTSPQRHS*QALPNY Trigger: ATAATTGGGAAGAGCCTGTCAGCTGTGCCTTTGTGG...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | GAAGAAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTGCCTCTCAGGGCCTTaGAGTTCTTGTTGTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEEYLFCDVTHGCTSCLDCLSGP*SSCCSR Trigger: TCTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCA...GTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTCTTGGTTTTCCTTCCTaGATCACCTCCGTGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCLGFPS*ITSVFA Trigger: GGCAAACACGGAGGTGATGCAGGAAGGAAAACCAAG...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CCA 90 bp | CACTGCTGTGATAGATTTGGCCATGTGACTTTTATGATTTGGACATGTTTTTGTGATGATGTACACCTTTaGCTTGCCTCTCAGGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HCCDRFGHVTFMIWTCFCDDVHL*LASQGL Trigger: AAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCATC...ACAAAAACATGTCCAAATCATAAAAGTCACATGGCCAAATCTATCACAGCAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTTTCCGGAGGGTGCTTTaGACTTCAGGGTTCACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KNIYSVMSLMVVLPALTSFRRVL*TSGFTF Trigger: GAAAGTGAACCCTGAAGTCCAAAGCACCCTCCGGAA...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR GCA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTGATCCCTCTTCATGGTaGTTTCAAATTTCAGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: KNIYSVMSLMVVLPALTSDPSSW*FQISGN Trigger: GTTACCTGAAATTTGAAAGCACCATGAAGAGGGATC...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS TCA 90 bp | GTTCCAGGGCCTCCATGTCTACCTCGGAACCCTCCCGGGCTTTGGTaGCACACAGCGTCAGGGCCAGGCGGGCACCTGACATATCATATC | + |
|
Preference number: 5 (lower is better) Translates to: VPGPPCLPRNPPGLW*HTASGPGGHLTYHI Trigger: GATATGATATGTCAGGTGCCCGCCTGGCCCTGACGCTGTGTGTCACCAAAGCCCGGGAGGGTTCCGAGGTAGACATGGAGGCCCTGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS CCA 90 bp | CCACGTAGTTCCTCACCGGGGTCTCTGTGCTCTCCTCTACAAGCCTaGATGATGTACACCTTTGGCTTGCCTCTCAGGGCCTTGCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PRSSSPGSLCSPLQA*MMYTFGLPLRALQF Trigger: GAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCATCCAGGCTTGTAGAGGAGAGCACAGAGACCCCGGTGAGGAACTACGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | GACGCACCCTTTGGGATAAGGCTAGTAGCTGGAGGGGAAGGGCTGCTCAAGTCCCTTCCGGAGGGTGCTTaGGACTTCAGGGTTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: DAPFGIRLVAGGEGLLKSLPEGA*DFRVHF Trigger: AAAGTGAACCCTGAAGTCCAAAGCACCCTCCGGAAG...GGACTTGAGCAGCCCTTCCCCTCCAGCTACTAGCCTTATCCCAAAGGGTGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS TCA 90 bp | GTAGTTCCTCACCGGGGTCTCTGTGCTCTCCTCTACAAGCCTGGATaGTGTACACCTTTGGCTTGCCTCTCAGGGCCTTGCAGTTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVPHRGLCALLYKPG*CTPLACLSGPCSSC Trigger: ACAAGAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCATCCAGGCTTGTAGAGGAGAGCACAGAGACCCCGGTGAGGAACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS GCA 90 bp | TGGGATCCCTCTTCATGGTGCTTTCAAATTTCAGGTAACGGAACATaGGTTCCAGGGCCTCCATGTCTACCTCGGAACCCTCCCGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WDPSSWCFQISGNGT*VPGPPCLPRNPPGL Trigger: AAGCCCGGGAGGGTTCCGAGGTAGACATGGAGGCCCTGGAACGCATGTTCCGTTACCTGAAATTTGAAAGCACCATGAAGAGGGATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS-3UTR CAA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCTTCTCATCTTCTCCCTaGAGGAGGCCTTCCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPFSSSP*RRPSSP Trigger: TGGTGAGGAAGGCCTCCTCAAGGGAGAAGATGAGAA...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCCTTCCGGAGGGTGCTTaGGACTTCAGGGTTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPLPEGA*DFRVHF Trigger: AAAGTGAACCCTGAAGTCCAAAGCACCCTCCGGAAG...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS GCA 90 bp | CCAACTCTTCCAGAAATTGCTGGGCGGTGGGATCCCTCTTCATGGTaGTTTCAAATTTCAGGTAACGGAACATGCGTTCCAGGGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PTLPEIAGRWDPSSW*FQISGNGTCVPGPP Trigger: TGGAGGCCCTGGAACGCATGTTCCGTTACCTGAAATTTGAAAGCACCATGAAGAGGGATCCCACCGCCCAGCAATTTCTGGAAGAGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS CCA 90 bp | GGGGTCTCTGTGCTCTCCTCTACAAGCCTGGATGATGTACACCTTTaGCTTGCCTCTCAGGGCCTTGCAGTTCTTGTTGTTCAAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVSVLSSTSLDDVHL*LASQGLAVLVVQDF Trigger: GAAGTCTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCATCCAGGCTTGTAGAGGAGAGCACAGAGACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS CCA 90 bp | GTACCCCTCTACCGTGGAGTAGATGTGGAGGGTATCCGTATAGGTTaGGATACTTTGGGGGTTGTTCTTGAGCACAGCAACCTCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPLYRGVDVEGIRIG*DTLGVVLEHSNLIS Trigger: GGAGATGAGGTTGCTGTGCTCAAGAACAACCCCCAAAGTATCCCAACCTATACGGATACCCTCCACATCTACTCCACGGTAGAGGGGTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGGAACCCTCCCGGGCTTaGGTGACACACAGCGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMEPSRA*VTHSVR Trigger: CCTGACGCTGTGTGTCACCAAAGCCCGGGAGGGTTC...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS CCA 90 bp | CAGAGCCTTTCTCGTCATGTCTATAGGAGAGGTACCCCTCTACCGTaGAGTAGATGTGGAGGGTATCCGTATAGGTTGGGATACTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSLSRHVYRRGTPLP*SRCGGYPYRLGYFG Trigger: CCCAAAGTATCCCAACCTATACGGATACCCTCCACATCTACTCCACGGTAGAGGGGTACCTCTCCTATAGACATGACGAGAAAGGCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS TCA 90 bp | TGTGGAGGGTATCCGTATAGGTTGGGATACTTTGGGGGTTGTTCTTaGGCACAGCAACCTCATCTCCACCTAGTTCCTCATCTCCACCTA | + |
|
Preference number: 5 (lower is better) Translates to: CGGYPYRLGYFGGCS*AQQPHLHLVPHLHL Trigger: TAGGTGGAGATGAGGAACTAGGTGGAGATGAGGTTGCTGTGCTCAAGAACAACCCCCAAAGTATCCCAACCTATACGGATACCCTCCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | TCACCAGAGATGTCAGGACCACTAACATGGCGTCTTCTTCCTTGGGACATGCCCGCCTTGCAGTTCTTGTaGTTCAAGACTTCAAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPEMSGPLTWRLLPWDMPALQFL*FKTSKR Trigger: CCTTTTTGAAGTCTTGAACAACAAGAACTGCAAGGC...GGGCATGTCCCAAGGAAGAAGACGCCATGTTAGTGGTCCTGACATCTCTGGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | ATACCAAGGAAGTGGGGTCACTGCTGTGATAGATTTGGCCATGTGACTTTTATGTTCTCATCTTCTCCCTaGAGGAGGCCTTCCTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: IPRKWGHCCDRFGHVTFMFSSSP*RRPSSP Trigger: TGGTGAGGAAGGCCTCCTCAAGGGAGAAGATGAGAA...CATAAAAGTCACATGGCCAAATCTATCACAGCAGTGACCCCACTTCCTTGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS CCA 90 bp | TGGTCTGCTGAAATTCATCCAACTCTTCCAGAAATTGCTGGGCGGTaGGATCCCTCTTCATGGTGCTTTCAAATTTCAGGTAACGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: WSAEIHPTLPEIAGR*DPSSWCFQISGNGT Trigger: TGTTCCGTTACCTGAAATTTGAAAGCACCATGAAGAGGGATCCCACCGCCCAGCAATTTCTGGAAGAGTTGGATGAATTTCAGCAGACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACCAACTCTTCCAGAAATaGCTGGGCGGTGGGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EEEYLFCDVTHGCTSCLDQLFQK*LGGGIP Trigger: AGGGATCCCACCGCCCAGCAATTTCTGGAAGAGTTG...GTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACGGGATACTTTGGGGGTaGTTCTTGAGCACAGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: EEEYLFCDVTHGCTSCLDGILWG*FLSTAT Trigger: GGTTGCTGTGCTCAAGAACAACCCCCAAAGTATCCC...GTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACCAGGGTTCACTTTCCTaGGTTTTCCTTCCTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EEEYLFCDVTHGCTSCLDQGSLS*VFLPAS Trigger: TGATGCAGGAAGGAAAACCAAGGAAAGTGAACCCTG...GTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTCAGGGTTCACTTTCCTaGGTTTTCCTTCCTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: KNIYSVMSLMVVLPALTSQGSLS*VFLPAS Trigger: TGATGCAGGAAGGAAAACCAAGGAAAGTGAACCCTG...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACAGGGCCTTGCAGTTCTaGTTGTTCAAGACTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: EEEYLFCDVTHGCTSCLDRALQF*LFKTSK Trigger: TTTTGAAGTCTTGAACAACAAGAACTGCAAGGCCCT...GTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS-3UTR CAA 90 bp | AAGAATATTTATTCTGTGATGTCACTCATGGTTGTACTTCCTGCCTTGACTTCTAGGGCCTTGCAGTTCTaGTTGTTCAAGACTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: KNIYSVMSLMVVLPALTSRALQF*LFKTSK Trigger: TTTTGAAGTCTTGAACAACAAGAACTGCAAGGCCCT...AGAAGTCAAGGCAGGAAGTACAACCATGAGTGACATCACAGAATAAATATTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
||
| CDS CAA 72 bp | AGGGCCTCCATGTCTACCTCGGAACCCTCCCGGGCTTaGGTGACACACAGCGTCAGGGCCAGGCGGGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: RASMSTSEPSRA*VTHSVRARRAP Trigger: AGGTGCCCGCCTGGCCCTGACGCTGTGTGTCACCAAAGCCCGGGAGGGTTCCGAGGTAGACATGGAGGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS TCA 72 bp | CCTCCATGTCTACCTCGGAACCCTCCCGGGCTTTGGTaGCACACAGCGTCAGGGCCAGGCGGGCACCTGACA | + |
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Preference number: 6 (lower is better) Translates to: PPCLPRNPPGLW*HTASGPGGHLT Trigger: TGTCAGGTGCCCGCCTGGCCCTGACGCTGTGTGTCACCAAAGCCCGGGAGGGTTCCGAGGTAGACATGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CAA 90 bp | ATGCGTTCCAGGGCCTCCATGTCTACCTCGGAACCCTCCCGGGCTTaGGTGACACACAGCGTCAGGGCCAGGCGGGCACCTGACATATCA | + |
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Preference number: 6 (lower is better) Translates to: MRSRASMSTSEPSRA*VTHSVRARRAPDIS Trigger: TGATATGTCAGGTGCCCGCCTGGCCCTGACGCTGTGTGTCACCAAAGCCCGGGAGGGTTCCGAGGTAGACATGGAGGCCCTGGAACGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS GCA 72 bp | CTCATCTTCTCCCTTGAGGAGGCCTTCCTCACCATGTaGCATGAGTACCACAAAGGCACAGCTGACAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LIFSLEEAFLTM*HEYHKGTADRL Trigger: GAGCCTGTCAGCTGTGCCTTTGTGGTACTCATGGCACATGGTGAGGAAGGCCTCCTCAAGGGAGAAGATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CCA 72 bp | TCTCGTCATGTCTATAGGAGAGGTACCCCTCTACCGTaGAGTAGATGTGGAGGGTATCCGTATAGGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SRHVYRRGTPLP*SRCGGYPYRLG Trigger: TCCCAACCTATACGGATACCCTCCACATCTACTCCACGGTAGAGGGGTACCTCTCCTATAGACATGACGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS GCA 72 bp | TCTTCATGGTGCTTTCAAATTTCAGGTAACGGAACATaGGTTCCAGGGCCTCCATGTCTACCTCGGAACCCT | + |
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Preference number: 6 (lower is better) Translates to: SSWCFQISGNGT*VPGPPCLPRNP Trigger: AGGGTTCCGAGGTAGACATGGAGGCCCTGGAACGCATGTTCCGTTACCTGAAATTTGAAAGCACCATGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS GCA 72 bp | CCAGAAATTGCTGGGCGGTGGGATCCCTCTTCATGGTaGTTTCAAATTTCAGGTAACGGAACATGCGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PEIAGRWDPSSW*FQISGNGTCVP Trigger: TGGAACGCATGTTCCGTTACCTGAAATTTGAAAGCACCATGAAGAGGGATCCCACCGCCCAGCAATTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS GCA 72 bp | TGGACTTCAGGGTTCACTTTCCTTGGTTTTCCTTCCTaGATCACCTCCGTGTTTGCCATAAGTCGGGTGATC | + |
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Preference number: 6 (lower is better) Translates to: WTSGFTFLGFPS*ITSVFAISRVI Trigger: GATCACCCGACTTATGGCAAACACGGAGGTGATGCAGGAAGGAAAACCAAGGAAAGTGAACCCTGAAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CAA 72 bp | TCTCCTCTACAAGCCTGGATGATGTACACCTTTGGCTaGCCTCTCAGGGCCTTGCAGTTCTTGTTGTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPLQAWMMYTFG*PLRALQFLLFK Trigger: CTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCATCCAGGCTTGTAGAGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CCA 72 bp | CTTCCAGAAATTGCTGGGCGGTGGGATCCCTCTTCATaGTGCTTTCAAATTTCAGGTAACGGAACATGCGTT | + |
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Preference number: 6 (lower is better) Translates to: LPEIAGRWDPSS*CFQISGNGTCV Trigger: AACGCATGTTCCGTTACCTGAAATTTGAAAGCACCATGAAGAGGGATCCCACCGCCCAGCAATTTCTGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CAA 90 bp | ACTTCAAAAAGGTCTTCTAGTCTGACCATCTTCTCATCTTCTCCCTaGAGGAGGCCTTCCTCACCATGTGCCATGAGTACCACAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TSKRSSSLTIFSSSP*RRPSSPCAMSTTKA Trigger: TGCCTTTGTGGTACTCATGGCACATGGTGAGGAAGGCCTCCTCAAGGGAGAAGATGAGAAGATGGTCAGACTAGAAGACCTTTTTGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CAA 90 bp | TCTCTGTGCTCTCCTCTACAAGCCTGGATGATGTACACCTTTGGCTaGCCTCTCAGGGCCTTGCAGTTCTTGTTGTTCAAGACTTCAAAA | + |
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Preference number: 6 (lower is better) Translates to: SLCSPLQAWMMYTFG*PLRALQFLLFKTSK Trigger: TTTTGAAGTCTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCATCCAGGCTTGTAGAGGAGAGCACAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS TCA 72 bp | CAGCTGACAGGCTCTTCCCAATTATCTATGGTCTGCTaGAATTCATCCAACTCTTCCAGAAATTGCTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: QLTGSSQLSMVC*NSSNSSRNCWA Trigger: CGCCCAGCAATTTCTGGAAGAGTTGGATGAATTTCAGCAGACCATAGATAATTGGGAAGAGCCTGTCAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CAA 72 bp | ACCTTTGGCTTGCCTCTCAGGGCCTTGCAGTTCTTGTaGTTCAAGACTTCAAAAAGGTCTTCTAGTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: TFGLPLRALQFL*FKTSKRSSSLT Trigger: GGTCAGACTAGAAGACCTTTTTGAAGTCTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CAA 90 bp | TGGATGATGTACACCTTTGGCTTGCCTCTCAGGGCCTTGCAGTTCTaGTTGTTCAAGACTTCAAAAAGGTCTTCTAGTCTGACCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: WMMYTFGLPLRALQF*LFKTSKRSSSLTIF Trigger: GAAGATGGTCAGACTAGAAGACCTTTTTGAAGTCTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCATCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CAA 72 bp | TACACCTTTGGCTTGCCTCTCAGGGCCTTGCAGTTCTaGTTGTTCAAGACTTCAAAAAGGTCTTCTAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: YTFGLPLRALQF*LFKTSKRSSSL Trigger: CAGACTAGAAGACCTTTTTGAAGTCTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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| CDS CAA 90 bp | ATGATGTACACCTTTGGCTTGCCTCTCAGGGCCTTGCAGTTCTTGTaGTTCAAGACTTCAAAAAGGTCTTCTAGTCTGACCATCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: MMYTFGLPLRALQFL*FKTSKRSSSLTIFS Trigger: TGAGAAGATGGTCAGACTAGAAGACCTTTTTGAAGTCTTGAACAACAAGAACTGCAAGGCCCTGAGAGGCAAGCCAAAGGTGTACATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005488.9 ENSMUST00000219237.2 |
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