Pregenerated sensors for CASKIN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034471Ensembl transcript IDs: ENSMUST00000041684.11, ENSMUST00000156812.2
Found 214 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATaGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCC | + |
Preference number: 1 (lower is better) Translates to: YLTARSQPALPPSVG*PGRSRKGHRQEGMP Trigger: GGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CCA 90 bp | CGGAAGGATTCTCCAGCCCAACCAGACCTCTGCCTGTTCCCTGTGTaGCACGGGCTTCTTCCACGCTGGGCCGAGGGCGGTGAACACTGG | + |
Preference number: 1 (lower is better) Translates to: RKDSPAQPDLCLFPV*HGLLPRWAEGGEHW Trigger: CCAGTGTTCACCGCCCTCGGCCCAGCGTGGAAGAAGCCCGTGCCACACAGGGAACAGGCAGAGGTCTGGTTGGGCTGGAGAATCCTTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CCA 90 bp | TCTGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTaGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCA | + |
Preference number: 1 (lower is better) Translates to: SVTSLPDPSQRCLPV*DGQAGAEKATGRKA Trigger: TGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR GCA 90 bp | ATGTACAGTTGTAAGAGTCTGGGCCCTGGGGATCTGTTACCTCACTaGCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCAGG | + |
Preference number: 1 (lower is better) Translates to: MYSCKSLGPGDLLPH*PIPASAASQCGMAR Trigger: CCTGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACAGATCCCCAGGGCCCAGACTCTTACAACTGTACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CCA 90 bp | GGACTGGCCAACCACGCAGCCTCACAGAGCCCTAGGGTGACTCAGTaGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAGGC | + |
Preference number: 1 (lower is better) Translates to: GLANHAASQSPRVTQ*WPDKFPDHRDFRQG Trigger: GCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCTCTGTGAGGCTGCGTGGTTGGCCAGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR GCA 90 bp | CAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTGACTGCCAGCCACTaGTTGAAGCCATTGGAGGCCTCTGCTACGGAAGGATTCTCCAGC | + |
Preference number: 1 (lower is better) Translates to: QVLTSPLGLSVTASH*LKPLEASATEGFSS Trigger: GCTGGAGAATCCTTCCGTAGCAGAGGCCTCCAATGGCTTCAAGCAGTGGCTGGCAGTCACAGACAGGCCGAGAGGACTTGTCAGAACCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CCA 90 bp | CTGGCCAACCACGCAGCCTCACAGAGCCCTAGGGTGACTCAGTGGTaGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAG | + |
Preference number: 1 (lower is better) Translates to: LANHAASQSPRVTQW*PDKFPDHRDFRQGK Trigger: CTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCTCTGTGAGGCTGCGTGGTTGGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR CCA 90 bp | GATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTTTGCACGGAGGGGACTaGCCAACCACGCAGCCTCAC | + |
Preference number: 2 (lower is better) Translates to: DGQAGAEKATGRKACPCCLHGGD*PTTQPH Trigger: GTGAGGCTGCGTGGTTGGCCAGTCCCCTCCGTGCAA...ACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR TCA 90 bp | GATCTGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGTCGCTCCCACACAGCTaGGGCCCCTCAGTCAGGTTC | + |
Preference number: 2 (lower is better) Translates to: DLLPHCPIPASAASQCGMSLPHS*GPSVRF Trigger: GAACCTGACTGAGGGGCCTCAGCTGTGTGGGAGCGA...CATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACAGATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR TCA 90 bp | GCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATCACAGAGCCCTAGGGTaGCTCAGTGGTGGCCAGACA | + |
Preference number: 2 (lower is better) Translates to: ARQEQKRPPAGRHAPAVYHRALG*LSGGQT Trigger: TGTCTGGCCACCACTGAGTCACCCTAGGGCTCTGTG...ATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR TCA 90 bp | GCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGCTGGGCCGAGGGCGGTaGACACTGGCAGGTGGGAGA | + |
Preference number: 2 (lower is better) Translates to: AGRHAPAVYLQLLCTLARLGRGR*TLAGGR Trigger: TCTCCCACCTGCCAGTGTTCACCGCCCTCGGCCCAG...CCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR GCA 90 bp | GGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTAGACAAGGCAAGGAGGTaGATCCCCAAATCCCTGTCA | + |
Preference number: 2 (lower is better) Translates to: GQAGAEKATGRKACPCCVDKARR*IPKSLS Trigger: TGACAGGGATTTGGGGATGCACCTCCTTGCCTTGTC...TACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CAA 90 bp | AGTCCTCTCGGCCTGTCTGTGACTGCCAGCCACTGCTTGAAGCCATaGGAGGCCTCTGCTACGGAAGGATTCTCCAGCCCAACCAGACCT | + |
Preference number: 2 (lower is better) Translates to: SPLGLSVTASHCLKP*EASATEGFSSPTRP Trigger: AGGTCTGGTTGGGCTGGAGAATCCTTCCGTAGCAGAGGCCTCCAATGGCTTCAAGCAGTGGCTGGCAGTCACAGACAGGCCGAGAGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR CCA 90 bp | CCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGGGACTGGCCAAGGGCTTCTTCCACGCTaGGCCGAGGGCGGTGAACAC | + |
Preference number: 2 (lower is better) Translates to: PCCVFTAPMYTCTEGTGQGLLPR*AEGGEH Trigger: GTGTTCACCGCCCTCGGCCCAGCGTGGAAGAAGCCC...TTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CAA 90 bp | GTTCTGACAAGTCCTCTCGGCCTGTCTGTGACTGCCAGCCACTGCTaGAAGCCATTGGAGGCCTCTGCTACGGAAGGATTCTCCAGCCCA | + |
Preference number: 2 (lower is better) Translates to: VLTSPLGLSVTASHC*KPLEASATEGFSSP Trigger: TGGGCTGGAGAATCCTTCCGTAGCAGAGGCCTCCAATGGCTTCAAGCAGTGGCTGGCAGTCACAGACAGGCCGAGAGGACTTGTCAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR GCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACGTGACTGCCAGCCACTaGTTGAAGCCATTGGAGGCC | + |
Preference number: 2 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHVTASH*LKPLEA Trigger: GGCCTCCAATGGCTTCAAGCAGTGGCTGGCAGTCAC...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR CCA 90 bp | GCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGGTGACTCAGTGGTaGCCAGACAAATTCCCAGAC | + |
Preference number: 2 (lower is better) Translates to: AGRHAPAVYLQLLCTLARRVTQW*PDKFPD Trigger: GTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCT...CCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR CCA 90 bp | GTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTGTGAACACTGGCAGGTaGGAGAGTCACAGGCCAAGG | + |
Preference number: 2 (lower is better) Translates to: VSWGKRLIVTEPRLDQLGVNTGR*ESHRPR Trigger: CCTTGGCCTGTGACTCTCCCACCTGCCAGTGTTCAC...ACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CCA 72 bp | GCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATaGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAA | + |
Preference number: 3 (lower is better) Translates to: ARSQPALPPSVG*PGRSRKGHRQE Trigger: TTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CCA 72 bp | TCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTaGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGC | + |
Preference number: 3 (lower is better) Translates to: SLPDPSQRCLPV*DGQAGAEKATG Trigger: GCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR TCA 72 bp | GTGGCACGGGCTTCTTCCACGCTGGGCCGAGGGCGGTaGACACTGGCAGGTGGGAGAGTCACAGGCCAAGGT | + |
Preference number: 3 (lower is better) Translates to: VARASSTLGRGR*TLAGGRVTGQG Trigger: ACCTTGGCCTGTGACTCTCCCACCTGCCAGTGTTCACCGCCCTCGGCCCAGCGTGGAAGAAGCCCGTGCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CCA 72 bp | TGCCTGTTCCCTGTGTGGCACGGGCTTCTTCCACGCTaGGCCGAGGGCGGTGAACACTGGCAGGTGGGAGAG | + |
Preference number: 3 (lower is better) Translates to: CLFPVWHGLLPR*AEGGEHWQVGE Trigger: CTCTCCCACCTGCCAGTGTTCACCGCCCTCGGCCCAGCGTGGAAGAAGCCCGTGCCACACAGGGAACAGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CCA 72 bp | TCTCCAGCCCAACCAGACCTCTGCCTGTTCCCTGTGTaGCACGGGCTTCTTCCACGCTGGGCCGAGGGCGGT | + |
Preference number: 3 (lower is better) Translates to: SPAQPDLCLFPV*HGLLPRWAEGG Trigger: ACCGCCCTCGGCCCAGCGTGGAAGAAGCCCGTGCCACACAGGGAACAGGCAGAGGTCTGGTTGGGCTGGAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR GCA 72 bp | TGTAAGAGTCTGGGCCCTGGGGATCTGTTACCTCACTaGCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGG | + |
Preference number: 3 (lower is better) Translates to: CKSLGPGDLLPH*PIPASAASQCG Trigger: CCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACAGATCCCCAGGGCCCAGACTCTTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR GCA 72 bp | CTGCTACGGAAGGATTCTCCAGCCCAACCAGACCTCTaGCTGTTCCCTGTGTGGCACGGGCTTCTTCCACGC | + |
Preference number: 3 (lower is better) Translates to: LLRKDSPAQPDL*LFPVWHGLLPR Trigger: GCGTGGAAGAAGCCCGTGCCACACAGGGAACAGGCAGAGGTCTGGTTGGGCTGGAGAATCCTTCCGTAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR TCA 72 bp | GACTGGCCAACCACGCAGCCTCACAGAGCCCTAGGGTaGCTCAGTGGTGGCCAGACAAATTCCCAGACCACA | + |
Preference number: 3 (lower is better) Translates to: DWPTTQPHRALG*LSGGQTNSQTT Trigger: TGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCTCTGTGAGGCTGCGTGGTTGGCCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR GCA 72 bp | ACAAGTCCTCTCGGCCTGTCTGTGACTGCCAGCCACTaGTTGAAGCCATTGGAGGCCTCTGCTACGGAAGGA | + |
Preference number: 3 (lower is better) Translates to: TSPLGLSVTASH*LKPLEASATEG Trigger: TCCTTCCGTAGCAGAGGCCTCCAATGGCTTCAAGCAGTGGCTGGCAGTCACAGACAGGCCGAGAGGACTTGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR GCA 72 bp | TGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTaGACGGAGGGGACTGGCCAACCACGCAGCCTCACA | + |
Preference number: 3 (lower is better) Translates to: CPCCVFTAPMYT*TEGTGQPRSLT Trigger: TGTGAGGCTGCGTGGTTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR CAA 90 bp | GCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGCACTGCTTGAAGCCATaGGAGGCCTCTGCTACGGAA | + |
Preference number: 3 (lower is better) Translates to: AGRHAPAVYLQLLCTLARHCLKP*EASATE Trigger: TTCCGTAGCAGAGGCCTCCAATGGCTTCAAGCAGTG...CCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR-3UTR CAA 90 bp | AGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAACTGCCAGCCACTGCTaGAAGCCATTGGAGGCCTCT | + |
Preference number: 3 (lower is better) Translates to: RVTQWWPDKFPDHRDFRQTASHC*KPLEAS Trigger: AGAGGCCTCCAATGGCTTCAAGCAGTGGCTGGCAGT...TTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | GCTCCCACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGGGGCGGCTCAAGCTGTaGGACCGGCGCTTCGGCCGA | + |
Preference number: 4 (lower is better) Translates to: APTQLRPLSQVLTSPLGLGRLKL*DRRFGR Trigger: TCGGCCGAAGCGCCGGTCTCACAGCTTGAGCCGCCC...CAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGCAGAGCTCTGCCCGCTaGCAGCACTGCGGATGCTGC | + |
Preference number: 4 (lower is better) Translates to: GWPGRSRKGHRQEGMPLLQSSAR*QHCGCC Trigger: GCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTG...CAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TGGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTACTGCGCAGCCAGGTaGAGGGGGATCTGCCCATCC | + |
Preference number: 4 (lower is better) Translates to: WDGQAGAEKATGRKACPCYCAAR*RGICPS Trigger: GGATGGGCAGATCCCCCTGCACCTGGCTGCGCAGTA...GCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCACAGCACTGCGGATGCTaGCCACGCTACCCTCGCTGC | + |
Preference number: 4 (lower is better) Translates to: CYLTARSQPALPPSVGWPQHCGC*PRYPRC Trigger: GCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTG...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCATGCCAGCACTGCGGATaGTGCCCACGCTACCCTCGC | + |
Preference number: 4 (lower is better) Translates to: CYLTARSQPALPPSVGWPCQHCG*CPRYPR Trigger: GCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCA...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTAGCTCAGGTTGTCTGCTaGGGACGGGGCATGCAGGCC | + |
Preference number: 4 (lower is better) Translates to: GQAGAEKATGRKACPCCVAQVVC*GRGMQA Trigger: GGCCTGCATGCCCCGTCCCCAGCAGACAACCTGAGC...TACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTAAGCCACCCCCTGCCATaGCTGCCTGTAGCTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: GQAGAEKATGRKACPCCVSHPLP*LPVALG Trigger: GCCCAGAGCTACAGGCAGCCATGGCAGGGGGTGGCT...TACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTACCGCTGCTCACCAGCTaGTTGTGGTACTGCGGCAGC | + |
Preference number: 4 (lower is better) Translates to: GQAGAEKATGRKACPCCVPLLTS*LWYCGS Trigger: GCTGCCGCAGTACCACAAGCAGCTGGTGAGCAGCGG...TACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GCTCCCACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGAGGCCTGGCAGTCCCTaGTCCTCACTGGCAGAGGGC | + |
Preference number: 4 (lower is better) Translates to: APTQLRPLSQVLTSPLGLRPGSP*SSLAEG Trigger: GCCCTCTGCCAGTGAGGACCAGGGACTGCCAGGCCT...CAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACCGGCCGAGGTGGGTCTaGAGGAGCGGCCGGAGAGCC | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHRPRWV*RSGRRA Trigger: GGCTCTCCGGCCGCTCCTCCAGACCCACCTCGGCCG...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | CACCTCCTCCTAGAGGAGAATGTTCTACGAGGGTCCCTGTTCAGGGGCCATAGCTGGCAGGCCTTCCCCTaGGCTGCCCCGAGATGGGGG | + |
Preference number: 4 (lower is better) Translates to: HLLLEENVLRGSLFRGHSWQAFP*AAPRWG Trigger: CCCCCATCTCGGGGCAGCTCAGGGGAAGGCCTGCCA...GCTATGGCCCCTGAACAGGGACCCTCGTAGAACATTCTCCTCTAGGAGGAGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCACCACGCTACCCTCGCTaGCCACGCTATTCCTGTCAC | + |
Preference number: 4 (lower is better) Translates to: CYLTARSQPALPPSVGWPPRYPR*PRYSCH Trigger: GTGACAGGAATAGCGTGGGCAGCGAGGGTAGCGTGG...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GCTCCCACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGAACTGCCCAGGGCACTaGCCACTGGCCCTTCAGCCT | + |
Preference number: 4 (lower is better) Translates to: APTQLRPLSQVLTSPLGLNCPGH*PLALQP Trigger: AGGCTGAAGGGCCAGTGGGCAGTGCCCTGGGCAGTT...CAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTGGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | CACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTCCGGCCAGAGGGCGGTaGCTCAGGTTGTCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: HTAEAPQSGSDKSSRPVCPARGR*LRLSAG Trigger: CCCAGCAGACAACCTGAGCCACCGCCCTCTGGCCGG...ACAGACAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCACTCACCAGCTGCTTGTaGTACTGCGGCAGCCCCAGT | + |
Preference number: 4 (lower is better) Translates to: CYLTARSQPALPPSVGWPLTSCL*YCGSPS Trigger: ACTGGGGCTGCCGCAGTACCACAAGCAGCTGGTGAG...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TGGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCCTCCGAGGGGCCGGTTaGTTCACTCAGTGTTCTCCT | + |
Preference number: 4 (lower is better) Translates to: WDGQAGAEKATGRKACPCLRGAG*FTQCSP Trigger: AGGAGAACACTGAGTGAACCAACCGGCCCCTCGGAG...GCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTGCCCACCCGCTTGCTaGCCACCTCGACGATGCCCG | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHCPPAC*PPRRCP Trigger: CGGGCATCGTCGAGGTGGTCAGCAAGCGGGTGGGCA...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GGGATCTGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGAGCACCACCTCAGTCTTaGCATACAGCGCAGCCTCGT | + |
Preference number: 4 (lower is better) Translates to: GICYLTARSQPALPPSVGAPPQS*HTAQPR Trigger: ACGAGGCTGCGCTGTATGGCAAGACTGAGGTGGTGC...TCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACAGATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TGGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCAGCCAACACGGTCTGTaGCCCTTTGGCTCTCATGGA | + |
Preference number: 4 (lower is better) Translates to: WDGQAGAEKATGRKACPCSQHGL*PFGSHG Trigger: TCCATGAGAGCCAAAGGGGCACAGACCGTGTTGGCT...GCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TGGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCGTTCCTCGGTGCCAATaGTCTTCTCAGCTGCCCTCA | + |
Preference number: 4 (lower is better) Translates to: WDGQAGAEKATGRKACPCVPRCQ*SSQLPS Trigger: TGAGGGCAGCTGAGAAGAGCATTGGCACCGAGGAAC...GCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TGGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCCCCAAGGCAGCGTGGTaGAGAGCAGAGAATCCATCA | + |
Preference number: 4 (lower is better) Translates to: WDGQAGAEKATGRKACPCPKAAW*RAENPS Trigger: TGATGGATTCTCTGCTCTCCACCACGCTGCCTTGGG...GCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCAGTAGTTGGGGTCACATaGGTCCTTCGCCTCTCCCTC | + |
Preference number: 4 (lower is better) Translates to: CYLTARSQPALPPSVGWPVVGVT*VLRLSL Trigger: GAGGGAGAGGCGAAGGACCCATGTGACCCCAACTAC...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATCCCCTTTGGCTCTCATaGATGTGGCCCTTCCAGCGG | + |
Preference number: 4 (lower is better) Translates to: ARQEQKRPPAGRHAPAVYPLWLS*MWPFQR Trigger: CCGCTGGAAGGGCCACATCCATGAGAGCCAAAGGGG...ATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTAGGGCCAGCTGTAGTTaGGCCTTCCCCATTCTCCAG | + |
Preference number: 4 (lower is better) Translates to: DGQAGAEKATGRKACPCCRASCS*AFPILQ Trigger: CTGGAGAATGGGGAAGGCCCAACTACAGCTGGCCCT...ACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | CTCGGCCTGTCTGTGACTGCCAGCCACTGCTTGAAGCCATTGGAGGCCTCTGCTGGGTCACACGGGGCTTaGGTGGACAGGGGATTGGAG | + |
Preference number: 4 (lower is better) Translates to: LGLSVTASHCLKPLEASAGSHGA*VDRGLE Trigger: CTCCAATCCCCTGTCCACCCAAGCCCCGTGTGACCC...AGCAGAGGCCTCCAATGGCTTCAAGCAGTGGCTGGCAGTCACAGACAGGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | ACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTGTCCAGCACTGGGCCCTaGGTGCCCAGGGGACTGAGT | + |
Preference number: 4 (lower is better) Translates to: TQLRPLSQVLTSPLGLSVSSTGP*VPRGLS Trigger: ACTCAGTCCCCTGGGCACCCAGGGCCCAGTGCTGGA...CACAGACAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | AGCCCTAGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTCCTTGGAGGGGGTACTaGACGGGGACCGAGCCGGGG | + |
Preference number: 4 (lower is better) Translates to: SPRVTQWWPDKFPDHRDFPWRGY*TGTEPG Trigger: CCCCGGCTCGGTCCCCGTCCAGTACCCCCTCCAAGG...AAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | GCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATGGGTGCCCAGGGGACTaGGTTACAGAGCTGAGAGAA | + |
Preference number: 4 (lower is better) Translates to: ARQEQKRPPAGRHAPAVYGCPGD*VTELRE Trigger: TTCTCTCAGCTCTGTAACTCAGTCCCCTGGGCACCC...ATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | CACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTCGCAGCCTCGTGGAGTaGGGTGCCTGTCTTGGTCTG | + |
Preference number: 4 (lower is better) Translates to: HTAEAPQSGSDKSSRPVCRSLVE*GACLGL Trigger: CAGACCAAGACAGGCACCGCACTCCACGAGGCTGCG...ACAGACAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GCTCCCACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTATGGGGCAGGTCCTTaGCCAGGGAGCGGAGAACAA | + |
Preference number: 4 (lower is better) Translates to: APTQLRPLSQVLTSPLGLYGAGP*PGSGEQ Trigger: TTGTTCTCCGCTCCCTGGCCAAGGACCTGCCCCATA...CAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTGGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACGGGAACACCAGGAGGTaGCCCTGGGGCTGGGCTAGA | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHGNTRR*PWGWAR Trigger: TCTAGCCCAGCCCCAGGGCCACCTCCTGGTGTTCCC...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCGCGCTTCGGCCGAGGTaGGTCTGGAGGAGCGGCCGG | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSALRPR*VWRSGR Trigger: CCGGCCGCTCCTCCAGACCCACCTCGGCCGAAGCGC...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCATGCCATTGCTGTCCTTaGTGTCCACAGTGGCTTGAG | + |
Preference number: 4 (lower is better) Translates to: CYLTARSQPALPPSVGWPCHCCP*CPQWLE Trigger: CTCAAGCCACTGTGGACATCAAGGACAGCAATGGCA...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | GGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGAGAGCGGTGGGGTCATaGAGGTTCCAGAAATCCTTA | + |
Preference number: 4 (lower is better) Translates to: GWPGRSRKGHRQEGMPLLRAVGS*RFQKSL Trigger: TAAGGATTTCTGGAACCTTCATGACCCCACCGCTCT...CAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | GGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTAGCTGAGAGAAGAGGCTaGAGTTCCTTGCGATGGAAG | + |
Preference number: 4 (lower is better) Translates to: GQAGAEKATGRKACPCCVAERRG*SSLRWK Trigger: CTTCCATCGCAAGGAACTTCAGCCTCTTCTCTCAGC...TACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | GCTCCCACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTGCGGCTTCCAAGGATaGGCTGGTCTGTTCCAGTCT | + |
Preference number: 4 (lower is better) Translates to: APTQLRPLSQVLTSPLGLCGFQG*AGLFQS Trigger: AGACTGGAACAGACCAGCTCATCCTTGGAAGCCGCA...CAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTGGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GTCAGCTGCTCACGGGGAGAGCTTCGCTCCCACACAGCTGAGGCCCCTCAGTCACGTGATGACATCTCCTaGTCGGACATTGAGAGCGGT | + |
Preference number: 4 (lower is better) Translates to: VSCSRGELRSHTAEAPQSRDDIS*SDIESG Trigger: ACCGCTCTCAATGTCCGAGCAGGAGATGTCATCACG...TGACTGAGGGGCCTCAGCTGTGTGGGAGCGAAGCTCTCCCCGTGAGCAGCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACCTGCGGCAGCCCCAGTaGACACAGCCACTCCAGCAA | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHLRQPQ*TQPLQQ Trigger: TTGCTGGAGTGGCTGTGTGCACTGGGGCTGCCGCAG...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | CACCTCCTCCTAGAGGAGAATGTTCTACGAGGGTCCCTGTTCAGGGGCCATAGCCACAGGGCCAGTTGGTaGGGAAGGACCAGGGGACTC | + |
Preference number: 4 (lower is better) Translates to: HLLLEENVLRGSLFRGHSHRASW*GRTRGL Trigger: GAGTCCCCTGGTCCTTCCGCACCAACTGGCCCTGTG...GCTATGGCCCCTGAACAGGGACCCTCGTAGAACATTCTCCTCTAGGAGGAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTCCACATTGGGCTTACTaGCTGTGGAGTTTGCCAGAG | + |
Preference number: 4 (lower is better) Translates to: DGQAGAEKATGRKACPCCPHWAY*LWSLPE Trigger: CTCTGGCAAACTCCACAGGCAGTAAGCCCAATGTGG...ACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | CACCTCCTCCTAGAGGAGAATGTTCTACGAGGGTCCCTGTTCAGGGGCCATAGCTATCCGGGAGAAGCTTaGTCGCAGAGGGGTGGGGGC | + |
Preference number: 4 (lower is better) Translates to: HLLLEENVLRGSLFRGHSYPGEA*SQRGGG Trigger: GCCCCCACCCCTCTGCGACCAAGCTTCTCCCGGATA...GCTATGGCCCCTGAACAGGGACCCTCGTAGAACATTCTCCTCTAGGAGGAGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACCTGTGGCCCCTTCCTTaGGCCCCGAGGTTCCGTCTA | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHLWPLP*APRFRL Trigger: TAGACGGAACCTCGGGGCCCAAGGAAGGGGCCACAG...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACCGACACAGGGCCAGTTaGTGCGGAAGGACCAGGGGA | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHRHRAS*CGRTRG Trigger: TCCCCTGGTCCTTCCGCACCAACTGGCCCTGTGTCG...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | CACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTCTCCTGCTCGGACATTaGGAGCGGTGGGGTCATGAA | + |
Preference number: 4 (lower is better) Translates to: HTAEAPQSGSDKSSRPVCLLLGH*ERWGHE Trigger: TTCATGACCCCACCGCTCTCAATGTCCGAGCAGGAG...ACAGACAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | AGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAACTGGACTGTCTGGGCTaGGGCCCACCCGAGGGAGCT | + |
Preference number: 4 (lower is better) Translates to: RVTQWWPDKFPDHRDFRQLDCLG*GPPEGA Trigger: AGCTCCCTCGGGTGGGCCTCAGCCCAGACAGTCCAG...TTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | GCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGCACTGCCCTGAAAGGTaGGGAGGCGAGGGCCAGCTG | + |
Preference number: 4 (lower is better) Translates to: AGRHAPAVYLQLLCTLARHCPER*GGEGQL Trigger: CAGCTGGCCCTCGCCTCCTCACCTTTCAGGGCAGTG...CCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | CCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGGGACTGGCCAAGGCTGTTCCTGTGAGTaGCCAGAGCCCCGTGAGCGG | + |
Preference number: 4 (lower is better) Translates to: PCCVFTAPMYTCTEGTGQGCSCE*PEPRER Trigger: CCGCTCACGGGGCTCTGGTCACTCACAGGAACAGCC...TTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGTGCAGGGGGATCTaGCCATCCAGCGAGGCAGCG | + |
Preference number: 4 (lower is better) Translates to: AGRHAPAVYLQLLCTLARRCRGI*PSSEAA Trigger: CGCTGCCTCGCTGGATGGGCAGATCCCCCTGCACCT...CCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | CCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGGGACTGGCCAAGTGCCTTCAGAGCTCTaGCCGCTGCCAGCACTGCGG | + |
Preference number: 4 (lower is better) Translates to: PCCVFTAPMYTCTEGTGQVPSEL*PLPALR Trigger: CCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCAC...TTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | AGCCCTAGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTTGCCATGGCCGTTGGTaGCTTCAGAGCTCTGCCCGC | + |
Preference number: 4 (lower is better) Translates to: SPRVTQWWPDKFPDHRDFCHGRW*LQSSAR Trigger: GCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCA...AAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | ACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAGGAGGTGCATCCCCAAAGCTGGGGACGGGGCATaGAGGCCTGGCAGTCCCTGG | + |
Preference number: 4 (lower is better) Translates to: TNSQTTGTLDKARRCIPKAGDGA*RPGSPW Trigger: CCAGGGACTGCCAGGCCTGCATGCCCCGTCCCCAGC...TTTGGGGATGCACCTCCTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTATTAGCTTCTTCTGGTaGCCCAGCTTGTTCACGCCT | + |
Preference number: 4 (lower is better) Translates to: DGQAGAEKATGRKACPCCISFFW*PSLFTP Trigger: AGGCGTGAACAAGCTGGGGCACCAGAAGAAGCTAAT...ACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGCCCAGGGCTTCTCCATaGAGCAGGCCCCGCCGAAGT | + |
Preference number: 4 (lower is better) Translates to: AGRHAPAVYLQLLCTLARPRASP*SRPRRS Trigger: ACTTCGGCGGGGCCTGCTGCATGGAGAAGCCCTGGG...CCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGGGCCTTCCCCTGAGCTaGCCCGAGATGGGGGTGTTC | + |
Preference number: 4 (lower is better) Translates to: AGRHAPAVYLQLLCTLARGLPLS*PEMGVF Trigger: GAACACCCCCATCTCGGGGCAGCTCAGGGGAAGGCC...CCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTGCCTGTCTTGGTCTaGCGGTTGATCTCAATACCA | + |
Preference number: 4 (lower is better) Translates to: DGQAGAEKATGRKACPCCVPVLV*RLISIP Trigger: TGGTATTGAGATCAACCGCCAGACCAAGACAGGCAC...ACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACCGGTCTGTGCCCCTTTaGCTCTCATGGATGTGGCCC | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHRSVPL*LSWMWP Trigger: GGGCCACATCCATGAGAGCCAAAGGGGCACAGACCG...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | CCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGGGACTGGCCAACGGGGCATGCAGGCCTaGCAGTCCCTGGTCCTCACT | + |
Preference number: 4 (lower is better) Translates to: PCCVFTAPMYTCTEGTGQRGMQA*QSLVLT Trigger: AGTGAGGACCAGGGACTGCCAGGCCTGCATGCCCCG...TTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | CACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTTGGGCTTACTGCCTGTaGAGTTTGCCAGAGCGGGTC | + |
Preference number: 4 (lower is better) Translates to: HTAEAPQSGSDKSSRPVCWAYCL*SLPERV Trigger: GACCCGCTCTGGCAAACTCCACAGGCAGTAAGCCCA...ACAGACAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | ACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTGTGGGAGGTGGTGAACTaGTTGACTATGTCCAGCGCC | + |
Preference number: 4 (lower is better) Translates to: TQLRPLSQVLTSPLGLSVWEVVN*LTMSSA Trigger: GGCGCTGGACATAGTCAATCAGTTCACCACCTCCCA...CACAGACAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | ACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAGGAGGTGCATCCCCAAAGCCCGCTGCCAGCACTaGGGATGCTGCCCACGCTAC | + |
Preference number: 4 (lower is better) Translates to: TNSQTTGTLDKARRCIPKARCQH*GCCPRY Trigger: GTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGC...TTTGGGGATGCACCTCCTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACGAGGCTGAAGTTCCTTaGGATGGAAGGACGCTGGGC | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHEAEVP*DGRTLG Trigger: GCCCAGCGTCCTTCCATCGCAAGGAACTTCAGCCTC...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GCTCCCACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGAGTGCCACGCATAAGTaGCTGTTCAAAAGCAGCTGG | + |
Preference number: 4 (lower is better) Translates to: APTQLRPLSQVLTSPLGLSATHK*LFKSSW Trigger: CCAGCTGCTTTTGAACAGCCACTTATGCGTGGCACT...CAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | AGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAACCTGCTGGACTGTCTaGGCTGAGGCCCACCCGAGG | + |
Preference number: 4 (lower is better) Translates to: RVTQWWPDKFPDHRDFRQTCWTV*AEAHPR Trigger: CCTCGGGTGGGCCTCAGCCCAGACAGTCCAGCAGGT...TTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GGGATCTGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGACTTCCAAGGATGAGCTaGTCTGTTCCAGTCTCTGTT | + |
Preference number: 4 (lower is better) Translates to: GICYLTARSQPALPPSVGLPRMS*SVPVSV Trigger: AACAGAGACTGGAACAGACCAGCTCATCCTTGGAAG...TCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACAGATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | CCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGGGACTGGCCAACTCGAAGTAGCTGCTTaGTTTCCCGGCTGGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: PCCVFTAPMYTCTEGTGQLEVAA*FPGWPG Trigger: CCCAGGCCAGCCGGGAAATCAAGCAGCTACTTCGAG...TTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCCCTCGTGGAGTGCGGTaGCTGTCTTGGTCTGGCGGT | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSPRGVR*LSWSGG Trigger: ACCGCCAGACCAAGACAGGCACCGCACTCCACGAGG...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | AGCCCTAGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTGGGGTGTGGTGTAGTTaGGGTCACATGGGTCCTTCG | + |
Preference number: 4 (lower is better) Translates to: SPRVTQWWPDKFPDHRDFGVWCS*GHMGPS Trigger: CGAAGGACCCATGTGACCCCAACTACACCACACCCC...AAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | AGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAATCTCCTGTGGGGCGCTaGGGTCACCAACACTGGGCT | + |
Preference number: 4 (lower is better) Translates to: RVTQWWPDKFPDHRDFRQSPVGR*GHQHWA Trigger: AGCCCAGTGTTGGTGACCCCAGCGCCCCACAGGAGA...TTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | AGCCCTAGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGCATAGCATCCAGCTaGTCCGCCAGGGCATCGAAC | + |
Preference number: 4 (lower is better) Translates to: SPRVTQWWPDKFPDHRDFSIASS*SARASN Trigger: GTTCGATGCCCTGGCGGACCAGCTGGATGCTATGCT...AAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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3UTR CAA 72 bp | ATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTaGCACGGAGGGGACTGGCCAACCACGCAGCCTCAC | + |
Preference number: 4 (lower is better) Translates to: MPLLCIYSSYVH*HGGDWPTTQPH Trigger: GTGAGGCTGCGTGGTTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | AGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAGCAGAGGGCAGTGGCTaGGCGTTCTCAATCAGGAGG | + |
Preference number: 4 (lower is better) Translates to: RVTQWWPDKFPDHRDFRQAEGSG*AFSIRR Trigger: CCTCCTGATTGAGAACGCTCAGCCACTGCCCTCTGC...TTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTAGCCACCAGTTTCTaGACGCAGGTCACGTCTCCA | + |
Preference number: 4 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHLATSF*TQVTSP Trigger: TGGAGACGTGACCTGCGTGCAGAAACTGGTGGCTAA...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGCTGCTTGTGGTACTaGGGCAGCCCCAGTGCACAC | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSSCLWY*GSPSAH Trigger: GTGTGCACTGGGGCTGCCGCAGTACCACAAGCAGCT...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | AGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAATGGCTCTCATGGATGTaGCCCTTCCAGCGGCCATCG | + |
Preference number: 4 (lower is better) Translates to: RVTQWWPDKFPDHRDFRQWLSWM*PFQRPS Trigger: CGATGGCCGCTGGAAGGGCCACATCCATGAGAGCCA...TTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | CTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAGGTGGGGTCACCAACACTaGGCTGGGGAACAGGCTGTT | + |
Preference number: 4 (lower is better) Translates to: LSGGQTNSQTTGTLDKARWGHQH*AGEQAV Trigger: AACAGCCTGTTCCCCAGCCCAGTGTTGGTGACCCCA...CCTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAAGGTTCCTCTCCTGTaGGGCGCTGGGGTCACCAAC | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSKVPLL*GAGVTN Trigger: GTTGGTGACCCCAGCGCCCCACAGGAGAGGAACCTT...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCTCCTGTGTCCAGGCTTaGTCACCCCAATGGCCGTCA | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSSCVQA*SPQWPS Trigger: TGACGGCCATTGGGGTGACCAAGCCTGGACACAGGA...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTGATGGCCATCAGCTCTaGACCCCTGGTCATCCGGCG | + |
Preference number: 4 (lower is better) Translates to: VSWGKRLIVTEPRLDQLGDGHQL*TPGHPA Trigger: CGCCGGATGACCAGGGGTCCAGAGCTGATGGCCATC...ACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCCCTGAAAATGCCAGCTaGGTGCAGGCCACAGACACA | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSPENAS*VQATDT Trigger: TGTGTCTGTGGCCTGCACTCAGCTGGCATTTTCAGG...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | CACCTCCTCCTAGAGGAGAATGTTCTACGAGGGTCCCTGTTCAGGGGCCATAGCCATGGGTTAGACTGGTaGTGGAGAAGCATTTCTGAC | + |
Preference number: 4 (lower is better) Translates to: HLLLEENVLRGSLFRGHSHGLDW*WRSISD Trigger: GTCAGAAATGCTTCTCCAGCACCAGTCTAACCCATG...GCTATGGCCCCTGAACAGGGACCCTCGTAGAACATTCTCCTCTAGGAGGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | ACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAGGAGGTGCATCCCCAAAGCCTCTCGAAGTAGCTaGTTGATTTCCCGGCTGGCC | + |
Preference number: 4 (lower is better) Translates to: TNSQTTGTLDKARRCIPKASRSS*LISRLA Trigger: GGCCAGCCGGGAAATCAAGCAGCTACTTCGAGAGGC...TTTGGGGATGCACCTCCTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCCTTGGGAGCTGTTCCTaGTCCAGGCACTTTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSLGSCS*SRHFEE Trigger: CTCCTCAAAGTGCCTGGAGCAGGAACAGCTCCCAAG...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | CTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAGGAAAATGCCAGCTGAGTaGAGGCCACAGACACAGGCT | + |
Preference number: 4 (lower is better) Translates to: LSGGQTNSQTTGTLDKARKMPAE*RPQTQA Trigger: AGCCTGTGTCTGTGGCCTGCACTCAGCTGGCATTTT...CCTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCACTGGCAGAGGGCAGTaGCTGAGCGTTCTCAATCAG | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSTGRGQ*LSVLNQ Trigger: CTGATTGAGAACGCTCAGCCACTGCCCTCTGCCAGT...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | AGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAGCTTGGTCACCCCAATaGCCGTCAAATCCTCAGGTG | + |
Preference number: 4 (lower is better) Translates to: RVTQWWPDKFPDHRDFRQAWSPQ*PSNPQV Trigger: CACCTGAGGATTTGACGGCCATTGGGGTGACCAAGC...TTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCTCACCAACACTGGGCTaGGGAACAGGCTGTTCCTGT | + |
Preference number: 4 (lower is better) Translates to: LGKEVNSYRAQARPTGSSSPTLG*GTGCSC Trigger: ACAGGAACAGCCTGTTCCCCAGCCCAGTGTTGGTGA...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | AGCCCTAGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTACTGAGTTACAGAGCTaGGAGAAGAGGCTGAAGTTC | + |
Preference number: 4 (lower is better) Translates to: SPRVTQWWPDKFPDHRDFTELQS*EKRLKF Trigger: GAACTTCAGCCTCTTCTCTCAGCTCTGTAACTCAGT...AAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | CCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGGGACTGGCCAACCAGCTTTCAAGAGCTaGCTGATGACTTCTCTGTGG | + |
Preference number: 4 (lower is better) Translates to: PCCVFTAPMYTCTEGTGQPAFKS*LMTSLW Trigger: CCACAGAGAAGTCATCAGGCAGCTCTTGAAAGCTGG...TTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | AGCCCTAGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGGCATGGGTTAGACTaGTGCTGGAGAAGCATTTCT | + |
Preference number: 4 (lower is better) Translates to: SPRVTQWWPDKFPDHRDFRHGLD*CWRSIS Trigger: AGAAATGCTTCTCCAGCACCAGTCTAACCCATGCCT...AAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGACACATAAAGACATATaGGGCAGGTCCTTGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: AGRHAPAVYLQLLCTLARTHKDI*GRSLAR Trigger: CCTGGCCAAGGACCTGCCCCATATGTCTTTATGTGT...CCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | CTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAGGATGTCCAGCGCCGTCTaGTTATATGTGTTCCGGATA | + |
Preference number: 4 (lower is better) Translates to: LSGGQTNSQTTGTLDKARMSSAV*LYVFRI Trigger: TATCCGGAACACATATAACCAGACGGCGCTGGACAT...CCTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | GTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTTGTTCCAGTCTCTGTTaGGCCCGACCTGGACACACA | + |
Preference number: 4 (lower is better) Translates to: VSWGKRLIVTEPRLDQLGCSSLC*ARPGHT Trigger: TGTGTGTCCAGGTCGGGCCCAACAGAGACTGGAACA...ACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | ACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAGGAGGTGCATCCCCAAAAGCATTAGCTTCTTCTaGTGCCCCAGCTTGTTCACG | + |
Preference number: 4 (lower is better) Translates to: TNSQTTGTLDKARRCIPKSISFF*CPSLFT Trigger: CGTGAACAAGCTGGGGCACCAGAAGAAGCTAATGCT...TTTGGGGATGCACCTCCTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | ACAAATTCCCAGACCACAGGGACTTTAGACAAGGCAAGGAGGTGCATCCCCAAACAGGAGCTTTGTTTTTaGAGCCTTCACTTTAGCCAC | + |
Preference number: 4 (lower is better) Translates to: TNSQTTGTLDKARRCIPKQELCF*SLHFSH Trigger: GTGGCTAAAGTGAAGGCTGCAAAAACAAAGCTCCTG...TTTGGGGATGCACCTCCTTGCCTTGTCTAAAGTCCCTGTGGTCTGGGAATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | ATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAAGAGGTTAATAGTTACAAGGGTTAGAGGAAGCTaGGGGAGGGTCACACGGGGC | + |
Preference number: 4 (lower is better) Translates to: MWNDSFIDVSWGKRLIVTRVRGS*GRVTRG Trigger: GCCCCGTGTGACCCTCCCTCAGCTTCCTCTAACCCT...TGTAACTATTAACCTCTTTCCCCAACTAACATCAATGAAAGAGTCATTCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR GCA 90 bp | ATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAAGAGGTTAATAGTTACAGCTGGCTTCGGCCGCTaGTTGATAGTCAGGTTCCCC | + |
Preference number: 4 (lower is better) Translates to: MWNDSFIDVSWGKRLIVTAGFGR*LIVRFP Trigger: GGGGAACCTGACTATCAAGCAGCGGCCGAAGCCAGC...TGTAACTATTAACCTCTTTCCCCAACTAACATCAATGAAAGAGTCATTCCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | ATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAAGAGGTTAATAGTTACACCAAGTGCAGGGGTGTaGTGTAGTTGGGGTCACATG | + |
Preference number: 4 (lower is better) Translates to: MWNDSFIDVSWGKRLIVTPSAGV*CSWGHM Trigger: CATGTGACCCCAACTACACCACACCCCTGCACTTGG...TGTAACTATTAACCTCTTTCCCCAACTAACATCAATGAAAGAGTCATTCCACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CCA 90 bp | ATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAAGAGGTTAATAGTTACACTGATGACTTCTCTGTaGCCATTCTTGGCAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: MWNDSFIDVSWGKRLIVTLMTSL*PFLAAK Trigger: CTTGGCTGCCAAGAATGGCCACAGAGAAGTCATCAG...TGTAACTATTAACCTCTTTCCCCAACTAACATCAATGAAAGAGTCATTCCACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR TCA 90 bp | ATGTGGAATGACTCTTTCATTGATGTTAGTTGGGGAAAGAGGTTAATAGTTACATCACTTAGCCAGTTATaGATGGCCTGTGCATCCTTC | + |
Preference number: 4 (lower is better) Translates to: MWNDSFIDVSWGKRLIVTSLSQL*MACASF Trigger: GAAGGATGCACAGGCCATTCATAACTGGCTAAGTGA...TGTAACTATTAACCTCTTTCCCCAACTAACATCAATGAAAGAGTCATTCCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | GGAGGCCAGTGCCATGGCCGTTGGTGCCTTCAGAGCTCTGCCCGCTaGCAGCACTGCGGATGCTGCCCACGCTACCCTCGCTGCCCACGC | + |
Preference number: 5 (lower is better) Translates to: GGQCHGRWCLQSSAR*QHCGCCPRYPRCPR Trigger: GCGTGGGCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCTCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 90 bp | TCCAGAGCGGTAACCGGCCAGAGGGCGGTGGCTCAGGTTGTCTGCTaGGGACGGGGCATGCAGGCCTGGCAGTCCCTGGTCCTCACTGGC | + |
Preference number: 5 (lower is better) Translates to: SRAVTGQRAVAQVVC*GRGMQAWQSLVLTG Trigger: GCCAGTGAGGACCAGGGACTGCCAGGCCTGCATGCCCCGTCCCCAGCAGACAACCTGAGCCACCGCCCTCTGGCCGGTTACCGCTCTGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | CTCTCCAGAGCGGTAACCGGCCAGAGGGCGGTGGCTCAGGTTGTCTaGTGGGGACGGGGCATGCAGGCCTGGCAGTCCCTGGTCCTCACT | + |
Preference number: 5 (lower is better) Translates to: LSRAVTGQRAVAQVV*WGRGMQAWQSLVLT Trigger: AGTGAGGACCAGGGACTGCCAGGCCTGCATGCCCCGTCCCCAGCAGACAACCTGAGCCACCGCCCTCTGGCCGGTTACCGCTCTGGAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTAGGGCGGTGGCTCAGGTaGTCTGCTGGGGACGGGGCA | + |
Preference number: 5 (lower is better) Translates to: GQAGAEKATGRKACPCCVGRWLR*SAGDGA Trigger: TGCCCCGTCCCCAGCAGACAACCTGAGCCACCGCCC...TACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | GGCCGTTGGTGCCTTCAGAGCTCTGCCCGCTGCCAGCACTGCGGATaGTGCCCACGCTACCCTCGCTGCCCACGCTATTCCTGTCACCTG | + |
Preference number: 5 (lower is better) Translates to: GRWCLQSSARCQHCG*CPRYPRCPRYSCHL Trigger: CAGGTGACAGGAATAGCGTGGGCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | GGACCCCTGGTCATCCGGCGTCCGCCTTCACCCAGGGCTTCTCCATaGAGCAGGCCCCGCCGAAGTTCTGCCAGCCGTTTCACACCTAGC | + |
Preference number: 5 (lower is better) Translates to: GPLVIRRPPSPRASP*SRPRRSSASRFTPS Trigger: GCTAGGTGTGAAACGGCTGGCAGAACTTCGGCGGGGCCTGCTGCATGGAGAAGCCCTGGGTGAAGGCGGACGCCGGATGACCAGGGGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | AGCCGGAGGCTCCGTCTCCACATTGGGCTTACTGCCTGTGGAGTTTaGCAGAGCGGGTCCAGCACTGGGCCCTGGGTGCCCAGGGGACTG | + |
Preference number: 5 (lower is better) Translates to: SRRLRLHIGLTACGV*QSGSSTGPWVPRGL Trigger: CAGTCCCCTGGGCACCCAGGGCCCAGTGCTGGACCCGCTCTGGCAAACTCCACAGGCAGTAAGCCCAATGTGGAGACGGAGCCTCCGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | CGTTGGTGCCTTCAGAGCTCTGCCCGCTGCCAGCACTGCGGATGCTaGCCACGCTACCCTCGCTGCCCACGCTATTCCTGTCACCTGCTG | + |
Preference number: 5 (lower is better) Translates to: RWCLQSSARCQHCGC*PRYPRCPRYSCHLL Trigger: CAGCAGGTGACAGGAATAGCGTGGGCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | TGCCATGGCCGTTGGTGCCTTCAGAGCTCTGCCCGCTGCCAGCACTaGGGATGCTGCCCACGCTACCCTCGCTGCCCACGCTATTCCTGT | + |
Preference number: 5 (lower is better) Translates to: CHGRWCLQSSARCQH*GCCPRYPRCPRYSC Trigger: ACAGGAATAGCGTGGGCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | TCAATCAGGAGGCCAGTGCCATGGCCGTTGGTGCCTTCAGAGCTCTaGCCGCTGCCAGCACTGCGGATGCTGCCCACGCTACCCTCGCTG | + |
Preference number: 5 (lower is better) Translates to: SIRRPVPWPLVPSEL*PLPALRMLPTLPSL Trigger: CAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCTCCTGATTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | GTGGCTGAGCGTTCTCAATCAGGAGGCCAGTGCCATGGCCGTTGGTaGCTTCAGAGCTCTGCCCGCTGCCAGCACTGCGGATGCTGCCCA | + |
Preference number: 5 (lower is better) Translates to: VAERSQSGGQCHGRW*LQSSARCQHCGCCP Trigger: TGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCTCCTGATTGAGAACGCTCAGCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | CACTGGCAGAGGGCAGTGGCTGAGCGTTCTCAATCAGGAGGCCAGTaGCATGGCCGTTGGTGCCTTCAGAGCTCTGCCCGCTGCCAGCAC | + |
Preference number: 5 (lower is better) Translates to: HWQRAVAERSQSGGQ*HGRWCLQSSARCQH Trigger: GTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCTCCTGATTGAGAACGCTCAGCCACTGCCCTCTGCCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 90 bp | GCAGTGGCTGAGCGTTCTCAATCAGGAGGCCAGTGCCATGGCCGTTaGTGCCTTCAGAGCTCTGCCCGCTGCCAGCACTGCGGATGCTGC | + |
Preference number: 5 (lower is better) Translates to: AVAERSQSGGQCHGR*CLQSSARCQHCGCC Trigger: GCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCTCCTGATTGAGAACGCTCAGCCACTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 90 bp | AGTTGGGCCTTCCCCATTCTCCAGGCCTTCGATGGCCATCAGCTCTaGACCCCTGGTCATCCGGCGTCCGCCTTCACCCAGGGCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: SWAFPILQAFDGHQL*TPGHPASAFTQGFS Trigger: GGAGAAGCCCTGGGTGAAGGCGGACGCCGGATGACCAGGGGTCCAGAGCTGATGGCCATCGAAGGCCTGGAGAATGGGGAAGGCCCAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCAATATCCGGGAGAAGCTaGGTCGCAGAGGGGTGGGGG | + |
Preference number: 5 (lower is better) Translates to: CYLTARSQPALPPSVGWPISGRS*VAEGWG Trigger: CCCCCACCCCTCTGCGACCAAGCTTCTCCCGGATAT...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | TGGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCATATGGGGCAGGTCCTaGGCCAGGGAGCGGAGAACA | + |
Preference number: 5 (lower is better) Translates to: WDGQAGAEKATGRKACPCIWGRS*ARERRT Trigger: TGTTCTCCGCTCCCTGGCCAAGGACCTGCCCCATAT...GCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGGCTTCGGCCGCTGCTaGATAGTCAGGTTCCCCTCC | + |
Preference number: 5 (lower is better) Translates to: DGQAGAEKATGRKACPCCGFGRC*IVRFPS Trigger: GGAGGGGAACCTGACTATCAAGCAGCGGCCGAAGCC...ACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | ACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTGCCTGCTCCAGGCACTTaGAGGAGGGCGGCCGGGGGA | + |
Preference number: 5 (lower is better) Translates to: TQLRPLSQVLTSPLGLSVPAPGT*RRAAGG Trigger: TCCCCCGGCCGCCCTCCTCAAAGTGCCTGGAGCAGG...CACAGACAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 90 bp | CTTCCCCATTCTCCAGGCCTTCGATGGCCATCAGCTCTGGACCCCTaGTCATCCGGCGTCCGCCTTCACCCAGGGCTTCTCCATGCAGCA | + |
Preference number: 5 (lower is better) Translates to: LPHSPGLRWPSALDP*SSGVRLHPGLLHAA Trigger: TGCTGCATGGAGAAGCCCTGGGTGAAGGCGGACGCCGGATGACCAGGGGTCCAGAGCTGATGGCCATCGAAGGCCTGGAGAATGGGGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 90 bp | AGTTGGGGTCAGGCTAGGACTAGTCCGGGCAAGGGTGCTGCGTCCTaGTCTCCGAGTAAGCGTGGCATAACTGCCCAGGGCACTGCCCAC | + |
Preference number: 5 (lower is better) Translates to: SWGQARTSPGKGAAS*SPSKRGITAQGTAH Trigger: GTGGGCAGTGCCCTGGGCAGTTATGCCACGCTTACTCGGAGACCAGGACGCAGCACCCTTGCCCGGACTAGTCCTAGCCTGACCCCAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCAACTCCGAGGGGCCGGTaGGTTCACTCAGTGTTCTCC | + |
Preference number: 5 (lower is better) Translates to: CYLTARSQPALPPSVGWPTPRGR*VHSVFS Trigger: GGAGAACACTGAGTGAACCAACCGGCCCCTCGGAGT...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GCTCCCACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGAGGGTCACACGGGGCTaGGGTGGACAGGGGATTGGA | + |
Preference number: 5 (lower is better) Translates to: APTQLRPLSQVLTSPLGLRVTRG*GGQGIG Trigger: TCCAATCCCCTGTCCACCCAAGCCCCGTGTGACCCT...CAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTGGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | TGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATGGCCAAGGGGGCGCATGCCATaGCTGTCCTTGATGTCCACA | + |
Preference number: 5 (lower is better) Translates to: CYLTARSQPALPPSVGWPRGRMP*LSLMST Trigger: TGTGGACATCAAGGACAGCAATGGCATGCGCCCCCT...TGGCCATCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GTCAGCTGCTCACGGGGAGAGCTTCGCTCCCACACAGCTGAGGCCCCTCAGTCAAGTGCGGTGCCTGTCTaGGTCTGGCGGTTGATCTCA | + |
Preference number: 5 (lower is better) Translates to: VSCSRGELRSHTAEAPQSSAVPV*VWRLIS Trigger: TGAGATCAACCGCCAGACCAAGACAGGCACCGCACT...TGACTGAGGGGCCTCAGCTGTGTGGGAGCGAAGCTCTCCCCGTGAGCAGCTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GGGATCTGTTACCTCACTGCCCGATCCCAGCCAGCGCTGCCTCCCAGTGTGGGATCTCGAAGTAGCTGCTaGATTTCCCGGCTGGCCTGG | + |
Preference number: 5 (lower is better) Translates to: GICYLTARSQPALPPSVGSRSSC*ISRLAW Trigger: CCAGGCCAGCCGGGAAATCAAGCAGCTACTTCGAGA...TCCCACACTGGGAGGCAGCGCTGGCTGGGATCGGGCAGTGAGGTAACAGATCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATTTACAGCTCCTATGTACACGGGATGCCCACCCGCTaGCTGACCACCTCGACGATG | + |
Preference number: 5 (lower is better) Translates to: GHRQEGMPLLCIYSSYVHGMPTR*LTTSTM Trigger: CATCGTCGAGGTGGTCAGCAAGCGGGTGGGCATCCC...GTGTACATAGGAGCTGTAAATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 90 bp | GTGCATCCTTCCCTTCCAGTAGCTGCTCTGGTCTCACATCCTGGGTaGAGATCTCTCCAGAGCGGTAACCGGCCAGAGGGCGGTGGCTCA | + |
Preference number: 5 (lower is better) Translates to: VHPSLPVAALVSHPG*RSLQSGNRPEGGGS Trigger: TGAGCCACCGCCCTCTGGCCGGTTACCGCTCTGGAGAGATCTTCACCCAGGATGTGAGACCAGAGCAGCTACTGGAAGGGAAGGATGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 90 bp | CCCTGGGTGCCCAGGGGACTGAGTTACAGAGCTGAGAGAAGAGGCTaGAGTTCCTTGCGATGGAAGGACGCTGGGCTCAGACCGTTGTGG | + |
Preference number: 5 (lower is better) Translates to: PWVPRGLSYRAERRG*SSLRWKDAGLRPLW Trigger: CCACAACGGTCTGAGCCCAGCGTCCTTCCATCGCAAGGAACTTCAGCCTCTTCTCTCAGCTCTGTAACTCAGTCCCCTGGGCACCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | CCAGCGGCCATCGGGGTGCTGTTCGAGCACCGTGATGACATCTCCTaGTCGGACATTGAGAGCGGTGGGGTCATGAAGGTTCCAGAAATC | + |
Preference number: 5 (lower is better) Translates to: PAAIGVLFEHRDDIS*SDIESGGVMKVPEI Trigger: GATTTCTGGAACCTTCATGACCCCACCGCTCTCAATGTCCGAGCAGGAGATGTCATCACGGTGCTCGAACAGCACCCCGATGGCCGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTCTTGGTCTGGCGGTaGATCTCAATACCAGCTTTC | + |
Preference number: 5 (lower is better) Translates to: DGQAGAEKATGRKACPCCVLVWR*ISIPAF Trigger: GAAAGCTGGTATTGAGATCAACCGCCAGACCAAGAC...ACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | TGGTCCGCCAGGGCATCGAACATAGTGCTAATGTCATCCAGAATGTaGTTGGTAGACGTCCCTGTGGGGCCGTCTCGTTCCTCGGTGCCA | + |
Preference number: 5 (lower is better) Translates to: WSARASNIVLMSSRM*LVDVPVGPSRSSVP Trigger: TGGCACCGAGGAACGAGACGGCCCCACAGGGACGTCTACCAAGCACATTCTGGATGACATTAGCACTATGTTCGATGCCCTGGCGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | TGGGATGGCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCGTCTTCTTCAACTTGTaGACTAGGCATGGGTTAGAC | + |
Preference number: 5 (lower is better) Translates to: WDGQAGAEKATGRKACPCVFFNL*TRHGLD Trigger: GTCTAACCCATGCCTAGTCAACAAGTTGAAGAAGAC...GCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGCCATCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | AGCCCTAGGGTGACTCAGTGGTGGCCAGACAAATTCCCAGACCACAGGGACTTTTTCCTGTGTCCAGGCTaGGTCACCCCAATGGCCGTC | + |
Preference number: 5 (lower is better) Translates to: SPRVTQWWPDKFPDHRDFFLCPG*VTPMAV Trigger: GACGGCCATTGGGGTGACCAAGCCTGGACACAGGAA...AAAGTCCCTGTGGTCTGGGAATTTGTCTGGCCACCACTGAGTCACCCTAGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTGTGGCCCCTTCCTaGGGCCCCGAGGTTCCGTCT | + |
Preference number: 5 (lower is better) Translates to: VSWGKRLIVTEPRLDQLGPVAPS*GPEVPS Trigger: AGACGGAACCTCGGGGCCCAAGGAAGGGGCCACAGG...ACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | CACACAGCTGAGGCCCCTCAGTCAGGTTCTGACAAGTCCTCTCGGCCTGTCTGTCACTTGGGCCTGCGTTaGACAGTATCTGACTCTGTG | + |
Preference number: 5 (lower is better) Translates to: HTAEAPQSGSDKSSRPVCHLGLR*TVSDSV Trigger: CACAGAGTCAGATACTGTCAAACGCAGGCCCAAGTG...ACAGACAGGCCGAGAGGACTTGTCAGAACCTGACTGAGGGGCCTCAGCTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 90 bp | GAGGGTAAGTTCTGTGGACACATAAAGACATATGGGGCAGGTCCTTaGCCAGGGAGCGGAGAACAAAGCTTAGAGGGGCGCTCTGTACCC | + |
Preference number: 5 (lower is better) Translates to: EGKFCGHIKTYGAGP*PGSGEQSLEGRSVP Trigger: GGGTACAGAGCGCCCCTCTAAGCTTTGTTCTCCGCTCCCTGGCCAAGGACCTGCCCCATATGTCTTTATGTGTCCACAGAACTTACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GCCAGGCAGGAGCAGAAAAGGCCACCGGCAGGAAGGCATGCCCCTGCTGTGTATGGTGTCTTCTTCAACTaGTTGACTAGGCATGGGTTA | + |
Preference number: 5 (lower is better) Translates to: ARQEQKRPPAGRHAPAVYGVFFN*LTRHGL Trigger: TAACCCATGCCTAGTCAACAAGTTGAAGAAGACACC...ATACACAGCAGGGGCATGCCTTCCTGCCGGTGGCCTTTTCTGCTCCTGCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCACGGTCTGTGCCCCTTaGGCTCTCATGGATGTGGCC | + |
Preference number: 5 (lower is better) Translates to: LGKEVNSYRAQARPTGSSTVCAP*ALMDVA Trigger: GGCCACATCCATGAGAGCCAAAGGGGCACAGACCGT...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCTGCTCACCAGCTGCTaGTGGTACTGCGGCAGCCCC | + |
Preference number: 5 (lower is better) Translates to: VSWGKRLIVTEPRLDQLGLLTSC*WYCGSP Trigger: GGGGCTGCCGCAGTACCACAAGCAGCTGGTGAGCAG...ACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | CCCTGCTGTGTATTTACAGCTCCTATGTACACTTGCACGGAGGGGACTGGCCAATCTGACTCTGTGAGGTaGAAGTCAAGGCCAGGGGGC | + |
Preference number: 5 (lower is better) Translates to: PCCVFTAPMYTCTEGTGQSDSVR*KSRPGG Trigger: GCCCCCTGGCCTTGACTTCAACCTCACAGAGTCAGA...TTGGCCAGTCCCCTCCGTGCAAGTGTACATAGGAGCTGTAAATACACAGCAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | GTTAGTTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCAGTGCCATGGCCGTaGGTGCCTTCAGAGCTCTGC | + |
Preference number: 5 (lower is better) Translates to: VSWGKRLIVTEPRLDQLGPVPWP*VPSELC Trigger: GCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGG...ACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAACTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS-3UTR CAA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCAGTGGCTCTCTCTCCTaGCACTTGGGCCTGCGTTTG | + |
Preference number: 5 (lower is better) Translates to: LGKEVNSYRAQARPTGSSSGSLS*HLGLRL Trigger: CAAACGCAGGCCCAAGTGCAAGGAGAGAGAGCCACT...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 90 bp | GGGCAGTGTAGCCCTCTAGCTGGAACTCACTTAGCCAGTTATGAATaGCCTGTGCATCCTTCCCTTCCAGTAGCTGCTCTGGTCTCACAT | + |
Preference number: 5 (lower is better) Translates to: GQCSPLAGTHLASYE*PVHPSLPVAALVSH Trigger: ATGTGAGACCAGAGCAGCTACTGGAAGGGAAGGATGCACAGGCCATTCATAACTGGCTAAGTGAGTTCCAGCTAGAGGGCTACACTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 90 bp | ACCGTGATGACATCTCCTGCTCGGACATTGAGAGCGGTGGGGTCATaGAGGTTCCAGAAATCCTTAAGCGCTCGAACCTTCAAGATCCCT | + |
Preference number: 5 (lower is better) Translates to: TVMTSPARTLRAVGS*RFQKSLSARTFKIP Trigger: AGGGATCTTGAAGGTTCGAGCGCTTAAGGATTTCTGGAACCTTCATGACCCCACCGCTCTCAATGTCCGAGCAGGAGATGTCATCACGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 90 bp | CCCAGGAGCTTTGTTTTTGCAGCCTTCACTTTAGCCACCAGTTTCTaGACGCAGGTCACGTCTCCATTCTTGACGGCAAGGATAAGGTCC | + |
Preference number: 5 (lower is better) Translates to: PRSFVFAAFTLATSF*TQVTSPFLTARIRS Trigger: GGACCTTATCCTTGCCGTCAAGAATGGAGACGTGACCTGCGTGCAGAAACTGGTGGCTAAAGTGAAGGCTGCAAAAACAAAGCTCCTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041684.11 ENSMUST00000156812.2 |
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CDS-3UTR CAA 90 bp | TTGGGGAAAGAGGTTAATAGTTACAGAGCCCAGGCTAGACCAACTGGGTCCTCCTGGAGCCCAGGAGCTTaGTTTTTGCAGCCTTCACTT | + |
Preference number: 5 (lower is better) Translates to: LGKEVNSYRAQARPTGSSWSPGA*FLQPSL Trigger: AAGTGAAGGCTGCAAAAACAAAGCTCCTGGGCTCCA...GGAGGACCCAGTTGGTCTAGCCTGGGCTCTGTAACTATTAACCTCTTTCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 72 bp | GCTTCCCCCTCAGCAGGGCCAGGGCGGCTCAAGCTGTaGGACCGGCGCTTCGGCCGAGGTGGGTCTGGAGGA | + |
Preference number: 6 (lower is better) Translates to: ASPSAGPGRLKL*DRRFGRGGSGG Trigger: TCCTCCAGACCCACCTCGGCCGAAGCGCCGGTCTCACAGCTTGAGCCGCCCTGGCCCTGCTGAGGGGGAAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | CGTTGGTGCCTTCAGAGCTCTGCCCGCTGCCAGCACTaGGGATGCTGCCCACGCTACCCTCGCTGCCCACGC | + |
Preference number: 6 (lower is better) Translates to: RWCLQSSARCQH*GCCPRYPRCPR Trigger: GCGTGGGCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | GTAACCGGCCAGAGGGCGGTGGCTCAGGTTGTCTGCTaGGGACGGGGCATGCAGGCCTGGCAGTCCCTGGTC | + |
Preference number: 6 (lower is better) Translates to: VTGQRAVAQVVC*GRGMQAWQSLV Trigger: GACCAGGGACTGCCAGGCCTGCATGCCCCGTCCCCAGCAGACAACCTGAGCCACCGCCCTCTGGCCGGTTAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | TGCCATGGCCGTTGGTGCCTTCAGAGCTCTGCCCGCTaGCAGCACTGCGGATGCTGCCCACGCTACCCTCGC | + |
Preference number: 6 (lower is better) Translates to: CHGRWCLQSSAR*QHCGCCPRYPR Trigger: GCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CAA 72 bp | GGCCAGGTTCCTCTTCTGTGTCCGACACAGGGCCAGTaGGTGCGGAAGGACCAGGGGACTCCGAGGGGCCGG | + |
Preference number: 6 (lower is better) Translates to: GQVPLLCPTQGQ*VRKDQGTPRGR Trigger: CCGGCCCCTCGGAGTCCCCTGGTCCTTCCGCACCAACTGGCCCTGTGTCGGACACAGAAGAGGAACCTGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | TGCCTTCAGAGCTCTGCCCGCTGCCAGCACTGCGGATaGTGCCCACGCTACCCTCGCTGCCCACGCTATTCC | + |
Preference number: 6 (lower is better) Translates to: CLQSSARCQHCG*CPRYPRCPRYS Trigger: GGAATAGCGTGGGCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | AGGCCAGTGCCATGGCCGTTGGTGCCTTCAGAGCTCTaGCCGCTGCCAGCACTGCGGATGCTGCCCACGCTA | + |
Preference number: 6 (lower is better) Translates to: RPVPWPLVPSEL*PLPALRMLPTL Trigger: TAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | GTCATCCGGCGTCCGCCTTCACCCAGGGCTTCTCCATaGAGCAGGCCCCGCCGAAGTTCTGCCAGCCGTTTC | + |
Preference number: 6 (lower is better) Translates to: VIRRPPSPRASP*SRPRRSSASRF Trigger: GAAACGGCTGGCAGAACTTCGGCGGGGCCTGCTGCATGGAGAAGCCCTGGGTGAAGGCGGACGCCGGATGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | GCCAGGTTCCTCTTCTGTGTCCGACACAGGGCCAGTTaGTGCGGAAGGACCAGGGGACTCCGAGGGGCCGGT | + |
Preference number: 6 (lower is better) Translates to: ARFLFCVRHRAS*CGRTRGLRGAG Trigger: ACCGGCCCCTCGGAGTCCCCTGGTCCTTCCGCACCAACTGGCCCTGTGTCGGACACAGAAGAGGAACCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 72 bp | CCAACACTGGGCTGGGGAACAGGCTGTTCCTGTGAGTaGCCAGAGCCCCGTGAGCGGGCGCCAATGCTCTCC | + |
Preference number: 6 (lower is better) Translates to: PTLGWGTGCSCE*PEPRERAPMLS Trigger: GGAGAGCATTGGCGCCCGCTCACGGGGCTCTGGTCACTCACAGGAACAGCCTGTTCCCCAGCCCAGTGTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 72 bp | GCTGGGCTCAGACCGTTGTGGAGGGTTAGAGGAAGCTaGGGGAGGGTCACACGGGGCTTGGGTGGACAGGGG | + |
Preference number: 6 (lower is better) Translates to: AGLRPLWRVRGS*GRVTRGLGGQG Trigger: CCCCTGTCCACCCAAGCCCCGTGTGACCCTCCCTCAGCTTCCTCTAACCCTCCACAACGGTCTGAGCCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | CTTCAGAGCTCTGCCCGCTGCCAGCACTGCGGATGCTaGCCACGCTACCCTCGCTGCCCACGCTATTCCTGT | + |
Preference number: 6 (lower is better) Translates to: LQSSARCQHCGC*PRYPRCPRYSC Trigger: ACAGGAATAGCGTGGGCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | CTCCGTCTCCACATTGGGCTTACTGCCTGTGGAGTTTaGCAGAGCGGGTCCAGCACTGGGCCCTGGGTGCCC | + |
Preference number: 6 (lower is better) Translates to: LRLHIGLTACGV*QSGSSTGPWVP Trigger: GGGCACCCAGGGCCCAGTGCTGGACCCGCTCTGGCAAACTCCACAGGCAGTAAGCCCAATGTGGAGACGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | GGGGAGCCGGAGGCTCCGTCTCCACATTGGGCTTACTaGCTGTGGAGTTTGCCAGAGCGGGTCCAGCACTGG | + |
Preference number: 6 (lower is better) Translates to: GEPEAPSPHWAY*LWSLPERVQHW Trigger: CCAGTGCTGGACCCGCTCTGGCAAACTCCACAGGCAGTAAGCCCAATGTGGAGACGGAGCCTCCGGCTCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | TCTCCAGGCCTTCGATGGCCATCAGCTCTGGACCCCTaGTCATCCGGCGTCCGCCTTCACCCAGGGCTTCTC | + |
Preference number: 6 (lower is better) Translates to: SPGLRWPSALDP*SSGVRLHPGLL Trigger: GAGAAGCCCTGGGTGAAGGCGGACGCCGGATGACCAGGGGTCCAGAGCTGATGGCCATCGAAGGCCTGGAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CAA 72 bp | GCTCCGTCTCCACATTGGGCTTACTGCCTGTGGAGTTaGCCAGAGCGGGTCCAGCACTGGGCCCTGGGTGCC | + |
Preference number: 6 (lower is better) Translates to: APSPHWAYCLWS*PERVQHWALGA Trigger: GGCACCCAGGGCCCAGTGCTGGACCCGCTCTGGCAAACTCCACAGGCAGTAAGCCCAATGTGGAGACGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | TGCCAGCACTGCGGATGCTGCCCACGCTACCCTCGCTaGCCACGCTATTCCTGTCACCTGCTGGACTGTCTG | + |
Preference number: 6 (lower is better) Translates to: CQHCGCCPRYPR*PRYSCHLLDCL Trigger: CAGACAGTCCAGCAGGTGACAGGAATAGCGTGGGCAGCGAGGGTAGCGTGGGCAGCATCCGCAGTGCTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | CGTTCTCAATCAGGAGGCCAGTGCCATGGCCGTTGGTaGCTTCAGAGCTCTGCCCGCTGCCAGCACTGCGGA | + |
Preference number: 6 (lower is better) Translates to: RSQSGGQCHGRW*LQSSARCQHCG Trigger: TCCGCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCTCCTGATTGAGAACG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | AGGGCAGTGGCTGAGCGTTCTCAATCAGGAGGCCAGTaGCATGGCCGTTGGTGCCTTCAGAGCTCTGCCCGC | + |
Preference number: 6 (lower is better) Translates to: RAVAERSQSGGQ*HGRWCLQSSAR Trigger: GCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCTCCTGATTGAGAACGCTCAGCCACTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | ACGTCCCTGTGGGGCCGTCTCGTTCCTCGGTGCCAATaGTCTTCTCAGCTGCCCTCAGTGCGGCTTCCAAGG | + |
Preference number: 6 (lower is better) Translates to: TSLWGRLVPRCQ*SSQLPSVRLPR Trigger: CCTTGGAAGCCGCACTGAGGGCAGCTGAGAAGAGCATTGGCACCGAGGAACGAGACGGCCCCACAGGGACGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | CCAACACGGTCTGTGCCCCTTTGGCTCTCATGGATGTaGCCCTTCCAGCGGCCATCGGGGTGCTGTTCGAGC | + |
Preference number: 6 (lower is better) Translates to: PTRSVPLWLSWM*PFQRPSGCCSS Trigger: GCTCGAACAGCACCCCGATGGCCGCTGGAAGGGCCACATCCATGAGAGCCAAAGGGGCACAGACCGTGTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | GAGCGTTCTCAATCAGGAGGCCAGTGCCATGGCCGTTaGTGCCTTCAGAGCTCTGCCCGCTGCCAGCACTGC | + |
Preference number: 6 (lower is better) Translates to: ERSQSGGQCHGR*CLQSSARCQHC Trigger: GCAGTGCTGGCAGCGGGCAGAGCTCTGAAGGCACCAACGGCCATGGCACTGGCCTCCTGATTGAGAACGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | CAGGCTAGGACTAGTCCGGGCAAGGGTGCTGCGTCCTaGTCTCCGAGTAAGCGTGGCATAACTGCCCAGGGC | + |
Preference number: 6 (lower is better) Translates to: QARTSPGKGAAS*SPSKRGITAQG Trigger: GCCCTGGGCAGTTATGCCACGCTTACTCGGAGACCAGGACGCAGCACCCTTGCCCGGACTAGTCCTAGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | CTCTCATGGATGTGGCCCTTCCAGCGGCCATCGGGGTaGTGTTCGAGCACCGTGATGACATCTCCTGCTCGG | + |
Preference number: 6 (lower is better) Translates to: LSWMWPFQRPSG*CSSTVMTSPAR Trigger: CCGAGCAGGAGATGTCATCACGGTGCTCGAACAGCACCCCGATGGCCGCTGGAAGGGCCACATCCATGAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | GCCCTGAAAGGTGAGGAGGCGAGGGCCAGCTGTAGTTaGGCCTTCCCCATTCTCCAGGCCTTCGATGGCCAT | + |
Preference number: 6 (lower is better) Translates to: ALKGEEARASCS*AFPILQAFDGH Trigger: ATGGCCATCGAAGGCCTGGAGAATGGGGAAGGCCCAACTACAGCTGGCCCTCGCCTCCTCACCTTTCAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | TGTGGAGTTTGCCAGAGCGGGTCCAGCACTGGGCCCTaGGTGCCCAGGGGACTGAGTTACAGAGCTGAGAGA | + |
Preference number: 6 (lower is better) Translates to: CGVCQSGSSTGP*VPRGLSYRAER Trigger: TCTCTCAGCTCTGTAACTCAGTCCCCTGGGCACCCAGGGCCCAGTGCTGGACCCGCTCTGGCAAACTCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | TCTCAGCTGCCCTCAGTGCGGCTTCCAAGGATGAGCTaGTCTGTTCCAGTCTCTGTTGGGCCCGACCTGGAC | + |
Preference number: 6 (lower is better) Translates to: SQLPSVRLPRMS*SVPVSVGPDLD Trigger: GTCCAGGTCGGGCCCAACAGAGACTGGAACAGACCAGCTCATCCTTGGAAGCCGCACTGAGGGCAGCTGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 72 bp | CCCCAATGGCCGTCAAATCCTCAGGTGTCATCCGGCTaGTGGTCGGCACATCGTAGCCAGCCTGCAGGAAGT | + |
Preference number: 6 (lower is better) Translates to: PQWPSNPQVSSG*WSAHRSQPAGS Trigger: ACTTCCTGCAGGCTGGCTACGATGTGCCGACCATCAGCCGGATGACACCTGAGGATTTGACGGCCATTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 72 bp | TGGGCCCTGGGTGCCCAGGGGACTGAGTTACAGAGCTaGGAGAAGAGGCTGAAGTTCCTTGCGATGGAAGGA | + |
Preference number: 6 (lower is better) Translates to: WALGAQGTELQS*EKRLKFLAMEG Trigger: TCCTTCCATCGCAAGGAACTTCAGCCTCTTCTCTCAGCTCTGTAACTCAGTCCCCTGGGCACCCAGGGCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CAA 90 bp | TCCGCCAGGGCATCGAACATAGTGCTAATGTCATCCAGAATGTGCTaGGTAGACGTCCCTGTGGGGCCGTCTCGTTCCTCGGTGCCAATG | + |
Preference number: 6 (lower is better) Translates to: SARASNIVLMSSRMC*VDVPVGPSRSSVPM Trigger: CATTGGCACCGAGGAACGAGACGGCCCCACAGGGACGTCTACCAAGCACATTCTGGATGACATTAGCACTATGTTCGATGCCCTGGCGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | ATCGGGGTGCTGTTCGAGCACCGTGATGACATCTCCTaGTCGGACATTGAGAGCGGTGGGGTCATGAAGGTT | + |
Preference number: 6 (lower is better) Translates to: IGVLFEHRDDIS*SDIESGGVMKV Trigger: AACCTTCATGACCCCACCGCTCTCAATGTCCGAGCAGGAGATGTCATCACGGTGCTCGAACAGCACCCCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CAA 72 bp | TTGGGCCTGCGTTTGACAGTATCTGACTCTGTGAGGTaGAAGTCAAGGCCAGGGGGCACAGGTGTCTCACGG | + |
Preference number: 6 (lower is better) Translates to: LGLRLTVSDSVR*KSRPGGTGVSR Trigger: CCGTGAGACACCTGTGCCCCCTGGCCTTGACTTCAACCTCACAGAGTCAGATACTGTCAAACGCAGGCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CCA 72 bp | TTCTGTGGACACATAAAGACATATGGGGCAGGTCCTTaGCCAGGGAGCGGAGAACAAAGCTTAGAGGGGCGC | + |
Preference number: 6 (lower is better) Translates to: FCGHIKTYGAGP*PGSGEQSLEGR Trigger: GCGCCCCTCTAAGCTTTGTTCTCCGCTCCCTGGCCAAGGACCTGCCCCATATGTCTTTATGTGTCCACAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CAA 72 bp | GTTCTGTGGACACATAAAGACATATGGGGCAGGTCCTaGGCCAGGGAGCGGAGAACAAAGCTTAGAGGGGCG | + |
Preference number: 6 (lower is better) Translates to: VLWTHKDIWGRS*ARERRTKLRGA Trigger: CGCCCCTCTAAGCTTTGTTCTCCGCTCCCTGGCCAAGGACCTGCCCCATATGTCTTTATGTGTCCACAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CAA 72 bp | GCATCGAACATAGTGCTAATGTCATCCAGAATGTGCTaGGTAGACGTCCCTGTGGGGCCGTCTCGTTCCTCG | + |
Preference number: 6 (lower is better) Translates to: ASNIVLMSSRMC*VDVPVGPSRSS Trigger: CGAGGAACGAGACGGCCCCACAGGGACGTCTACCAAGCACATTCTGGATGACATTAGCACTATGTTCGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS TCA 72 bp | ACATCTCCTGCTCGGACATTGAGAGCGGTGGGGTCATaGAGGTTCCAGAAATCCTTAAGCGCTCGAACCTTC | + |
Preference number: 6 (lower is better) Translates to: TSPARTLRAVGS*RFQKSLSARTF Trigger: GAAGGTTCGAGCGCTTAAGGATTTCTGGAACCTTCATGACCCCACCGCTCTCAATGTCCGAGCAGGAGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CAA 72 bp | AACAGTGCAGTCTGTAGTGGCTCTCTCTCCTTGCACTaGGGCCTGCGTTTGACAGTATCTGACTCTGTGAGG | + |
Preference number: 6 (lower is better) Translates to: NSAVCSGSLSLH*GLRLTVSDSVR Trigger: CCTCACAGAGTCAGATACTGTCAAACGCAGGCCCAAGTGCAAGGAGAGAGAGCCACTACAGACTGCACTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS CAA 90 bp | CCAAAGGCCAACAGTGCAGTCTGTAGTGGCTCTCTCTCCTTGCACTaGGGCCTGCGTTTGACAGTATCTGACTCTGTGAGGTTGAAGTCA | + |
Preference number: 6 (lower is better) Translates to: PKANSAVCSGSLSLH*GLRLTVSDSVRLKS Trigger: TGACTTCAACCTCACAGAGTCAGATACTGTCAAACGCAGGCCCAAGTGCAAGGAGAGAGAGCCACTACAGACTGCACTGTTGGCCTTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041684.11 |
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CDS GCA 72 bp | TTTGTTTTTGCAGCCTTCACTTTAGCCACCAGTTTCTaGACGCAGGTCACGTCTCCATTCTTGACGGCAAGG | + |
Preference number: 6 (lower is better) Translates to: FVFAAFTLATSF*TQVTSPFLTAR Trigger: CCTTGCCGTCAAGAATGGAGACGTGACCTGCGTGCAGAAACTGGTGGCTAAAGTGAAGGCTGCAAAAACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041684.11 ENSMUST00000156812.2 |