RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CASKIN1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000033597

Ensembl transcript IDs: ENSMUST00000024958.9, ENSMUST00000234717.2

Found 533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAGCAGGGCCCAGCAGTTGTTGCACAGGGAGCAGCAGACAGGAATaGGCACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCC +
Preference number: 1 (lower is better)
Translates to: RAGPSSCCTGSSRQE*APAGSASAQSPWSA
Trigger: GGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGCAACAACTGCTGGGCCCTGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CCA 90 bp GTAAGAGCAAGGCACATCCTTCACGTCCTTCGGCCTCTCGGAAGCTaGAAGAACAGAGGGGAGGCCCTGGGCAGAGGCCCCGGGCAGAGC +
Preference number: 1 (lower is better)
Translates to: VRARHILHVLRPLGS*KNRGEALGRGPGQS
Trigger: GCTCTGCCCGGGGCCTCTGCCCAGGGCCTCCCCTCTGTTCTTCCAGCTTCCGAGAGGCCGAAGGACGTGAAGGATGTGCCTTGCTCTTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 90 bp TCCACCAGCAGAGCAAAGCCTGCAAGAGCAGGGCCCAGCAGTTGTTaGACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCA +
Preference number: 1 (lower is better)
Translates to: STSRAKPARAGPSSC*TGSSRQEWAPAGSA
Trigger: TGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGCAACAACTGCTGGGCCCTGCTCTTGCAGGCTTTGCTCTGCTGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 90 bp ACGCCTTTGCACTCATGCCCGAGTTCACATAGGGTTCACACTGGGTaGACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAG +
Preference number: 1 (lower is better)
Translates to: TPLHSCPSSHRVHTG*TLTPAPQGHGHTQK
Trigger: CTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGAACCCTATGTGAACTCGGGCATGAGTGCAAAGGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 90 bp ACACAGCCTCAAACACCCCTGCCCCTAGGCTGGCATGCACGCCTTTaGACTCATGCCCGAGTTCACATAGGGTTCACACTGGGTGCACCC +
Preference number: 1 (lower is better)
Translates to: TQPQTPLPLGWHARL*THARVHIGFTLGAP
Trigger: GGGTGCACCCAGTGTGAACCCTATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGGTGTTTGAGGCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 90 bp GGCAGGGCAGACACAGCCTCAAACACCCCTGCCCCTAGGCTGGCATaGACGCCTTTGCACTCATGCCCGAGTTCACATAGGGTTCACACT +
Preference number: 1 (lower is better)
Translates to: GRADTASNTPAPRLA*TPLHSCPSSHRVHT
Trigger: AGTGTGAACCCTATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGGTGTTTGAGGCTGTGTCTGCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 90 bp TCAAACACCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATaGCCGAGTTCACATAGGGTTCACACTGGGTGCACCCTCACACCA +
Preference number: 1 (lower is better)
Translates to: SNTPAPRLACTPLHS*PSSHRVHTGCTLTP
Trigger: TGGTGTGAGGGTGCACCCAGTGTGAACCCTATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGGTGTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR TCA 90 bp TCCCAGCTGTGTGTGCTCGTGACCAAGGGCAAGGCCACTCCTAGATaGAAGAGAAGGGCAGACAGGTGGCCTCAGCCTCTGACAGCTTTA +
Preference number: 1 (lower is better)
Translates to: SQLCVLVTKGKATPR*KRRADRWPQPLTAL
Trigger: TAAAGCTGTCAGAGGCTGAGGCCACCTGTCTGCCCTTCTCTTTCATCTAGGAGTGGCCTTGCCCTTGGTCACGAGCACACACAGCTGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR GCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACAGATGGGCGGGATGGCTaGCAACAGAGGCTGCCTCGG +
Preference number: 2 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTDGRDG*QQRLPR
Trigger: CCGAGGCAGCCTCTGTTGGCAGCCATCCCGCCCATC...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CAA 90 bp CTCCACCAGCAGAGCAAAGCCTGCAAGAGCAGGGCCCAGCAGTTGTaGCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGC +
Preference number: 2 (lower is better)
Translates to: LHQQSKACKSRAQQL*HREQQTGMGTSGQR
Trigger: GCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGCAACAACTGCTGGGCCCTGCTCTTGCAGGCTTTGCTCTGCTGGTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATAGTGCTTGTGCAGAGCTaGGCGTGCCCCGCCCACTCG +
Preference number: 2 (lower is better)
Translates to: PLPLGWHARLCTHARVHIVLVQS*ACPAHS
Trigger: CGAGTGGGCGGGGCACGCCCAGCTCTGCACAAGCAC...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCAGCAGCAGACAGGAATaGGCACCAGCGGGCAGCGCA +
Preference number: 2 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCSSRQE*APAGSA
Trigger: TGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCT...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCCGGCCTCTCGGAAGCTaGAAGAACAGAGGGGAGGCC +
Preference number: 2 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSRPLGS*KNRGEA
Trigger: GGCCTCCCCTCTGTTCTTCCAGCTTCCGAGAGGCCG...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCCCCTCATCTTCCCTTaGCACTCAGTCTGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGPLIFP*HSVCLG
Trigger: CCCTAGGCAGACTGAGTGCCAAGGGAAGATGAGGGG...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCCCCCTCATCTTCCCTTaGCACTCAGTCTGCCTAGGG +
Preference number: 2 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSPLIFP*HSVCLG
Trigger: CCCTAGGCAGACTGAGTGCCAAGGGAAGATGAGGGG...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR GCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACGGGCCCAGCAGTTGTTaGACAGGGAGCAGCAGACAG +
Preference number: 2 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHGPSSC*TGSSRQ
Trigger: CTGTCTGCTGCTCCCTGTGCAACAACTGCTGGGCCC...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR GCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACCAGCAGAGCAAAGCCTaGAAGAGCAGGGCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHQQSKA*KSRAQQ
Trigger: CTGCTGGGCCCTGCTCTTGCAGGCTTTGCTCTGCTG...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR GCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACAGCAGAGCAAAGCCTaGAAGAGCAGGGCCCAGCAG +
Preference number: 2 (lower is better)
Translates to: RSPPQPCVAWRRASKSKAQQSKA*KSRAQQ
Trigger: CTGCTGGGCCCTGCTCTTGCAGGCTTTGCTCTGCTG...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCTGCTCTGCCACAGATTaGAAAGAGGGCCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGCSATD*KEGHSG
Trigger: GCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCA...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAACAGCCCTGTGTGGCATaGAGGAGAGCCAGTAAGAGC +
Preference number: 2 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEQPCVA*RRASKS
Trigger: GCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTG...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAATGCTCTGCCACAGATTaGAAAGAGGGCCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPECSATD*KEGHSG
Trigger: GCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCA...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCAGCAGAGGTTCCCCAATaGGCAGTTCTGTGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: RSPPQPCVAWRRASKSKAAEVPQ*AVLCWA
Trigger: TGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGC...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATAAGAAGGGCAGACAGGTaGCCTCAGCCTCTGACAGCT +
Preference number: 2 (lower is better)
Translates to: PLPLGWHARLCTHARVHIRRADR*PQPLTA
Trigger: AGCTGTCAGAGGCTGAGGCCACCTGTCTGCCCTTCT...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR GCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCATACCCTCCCAGACTGTaGCTCCCAGCTGTGTGTGCT +
Preference number: 2 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSYPPRL*LPAVCA
Trigger: AGCACACACAGCTGGGAGGCACAGTCTGGGAGGGTA...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGGTGCTTGTGCAGAGCTaGGCGTGCCCCGCCCACTCG +
Preference number: 2 (lower is better)
Translates to: SVMPDTCGSANTREESSQVLVQS*ACPAHS
Trigger: CGAGTGGGCGGGGCACGCCCAGCTCTGCACAAGCAC...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR TCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATAAAGGCCACTCCTAGATaGAAGAGAAGGGCAGACAGG +
Preference number: 2 (lower is better)
Translates to: PLPLGWHARLCTHARVHIKATPR*KRRADR
Trigger: CCTGTCTGCCCTTCTCTTTCATCTAGGAGTGGCCTT...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGTATTCTGGGGTGCAGTaGGGCGAGCCCAACCTTGGC +
Preference number: 2 (lower is better)
Translates to: SVMPDTCGSANTREESSQYSGVQ*GEPNLG
Trigger: GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATA...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGCAGCCCTGTGTGGCATaGAGGAGAGCCAGTAAGAGC +
Preference number: 2 (lower is better)
Translates to: SVMPDTCGSANTREESSQQPCVA*RRASKS
Trigger: GCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTG...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR GCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATATTTTCTGGGGAAATCTaGCTCAGCTCATTCCCAATA +
Preference number: 2 (lower is better)
Translates to: PLPLGWHARLCTHARVHIFSGEI*LSSFPI
Trigger: TATTGGGAATGAGCTGAGGCAGATTTCCCCAGAAAA...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAATCTTTTTGTTTTTCTaGGGAAATCTGCCTCAGCTC +
Preference number: 2 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEIFLFF*GNLPQL
Trigger: GAGCTGAGGCAGATTTCCCCAGAAAAACAAAAAGAT...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR TCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGGGAGGGAGGAAAAGGTaGGACGAACTACACAACATA +
Preference number: 2 (lower is better)
Translates to: SVMPDTCGSANTREESSQGGRKR*DELHNI
Trigger: TATGTTGTGTAGTTCGTCTCACCTTTTCCTCCCTCC...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp CCAGGAGTAGGAGTTGTGCTTGTGCAGAGCTGGGCGTaGCCCGCCCACTCGGCCCCCACCCACCGCTTGAAG +
Preference number: 3 (lower is better)
Translates to: PGVGVVLVQSWA*PAHSAPTHRLK
Trigger: CTTCAAGCGGTGGGTGGGGGCCGAGTGGGCGGGGCACGCCCAGCTCTGCACAAGCACAACTCCTACTCCTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp CAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTaGTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATG +
Preference number: 3 (lower is better)
Translates to: QQTGMGTSGQRI*SEPLERPLTPM
Trigger: CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CCA 72 bp GTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTaGGCGGCCCACACAGAGGAGGCTGATGAGCGGTCA +
Preference number: 3 (lower is better)
Translates to: VQTPSPLPRALA*AAHTEEADERS
Trigger: TGACCGCTCATCAGCCTCCTCTGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CCA 72 bp AGGCACATCCTTCACGTCCTTCGGCCTCTCGGAAGCTaGAAGAACAGAGGGGAGGCCCTGGGCAGAGGCCCC +
Preference number: 3 (lower is better)
Translates to: RHILHVLRPLGS*KNRGEALGRGP
Trigger: GGGGCCTCTGCCCAGGGCCTCCCCTCTGTTCTTCCAGCTTCCGAGAGGCCGAAGGACGTGAAGGATGTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CCA 72 bp CCCAGCAGTTGTTGCACAGGGAGCAGCAGACAGGAATaGGCACCAGCGGGCAGCGCATCTGCTCAGAGCCCT +
Preference number: 3 (lower is better)
Translates to: PSSCCTGSSRQE*APAGSASAQSP
Trigger: AGGGCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGCAACAACTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp AAGGGAGGGGCAACCCTCCACCAGCAGAGCAAAGCCTaGAAGAGCAGGGCCCAGCAGTTGTTGCACAGGGAG +
Preference number: 3 (lower is better)
Translates to: KGGATLHQQSKA*KSRAQQLLHRE
Trigger: CTCCCTGTGCAACAACTGCTGGGCCCTGCTCTTGCAGGCTTTGCTCTGCTGGTGGAGGGTTGCCCCTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CAA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACAGGGCCCAGCAGTTGTaGCACAGGGAGCAGCAGACA +
Preference number: 3 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHRAQQL*HREQQT
Trigger: TGTCTGCTGCTCCCTGTGCAACAACTGCTGGGCCCT...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CAA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCAAGGGCCCAGCAGTTGTaGCACAGGGAGCAGCAGACA +
Preference number: 3 (lower is better)
Translates to: RSPPQPCVAWRRASKSKARAQQL*HREQQT
Trigger: TGTCTGCTGCTCCCTGTGCAACAACTGCTGGGCCCT...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp AGAGCAAAGCCTGCAAGAGCAGGGCCCAGCAGTTGTTaGACAGGGAGCAGCAGACAGGAATGGGCACCAGCG +
Preference number: 3 (lower is better)
Translates to: RAKPARAGPSSC*TGSSRQEWAPA
Trigger: CGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGCAACAACTGCTGGGCCCTGCTCTTGCAGGCTTTGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp CACTCATGCCCGAGTTCACATAGGGTTCACACTGGGTaGACCCTCACACCAGCACCCCAAGGGCATGGCCAC +
Preference number: 3 (lower is better)
Translates to: HSCPSSHRVHTG*TLTPAPQGHGH
Trigger: GTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGAACCCTATGTGAACTCGGGCATGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp CCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATaGCCGAGTTCACATAGGGTTCACACTGGGTGCACC +
Preference number: 3 (lower is better)
Translates to: PAPRLACTPLHS*PSSHRVHTGCT
Trigger: GGTGCACCCAGTGTGAACCCTATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp AATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCTCTaGCACAGATTGGAAAGAGGGCCACAGTGGCCACCC +
Preference number: 3 (lower is better)
Translates to: NGQFCAGHRPVL*HRLERGPQWPP
Trigger: GGGTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAGCACAGAACTGCCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp TCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTaGTCTGCCACAGATTGGAAAGAGGGCCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: SPMGSSVLGIGL*SATDWKEGHSG
Trigger: GCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp AGAACATCCATGGGAATTAAAGATGGGCGGGATGGCTaGCAACAGAGGCTGCCTCGGGGAGGCAGGGCAGAC +
Preference number: 3 (lower is better)
Translates to: RTSMGIKDGRDG*QQRLPRGGRAD
Trigger: GTCTGCCCTGCCTCCCCGAGGCAGCCTCTGTTGGCAGCCATCCCGCCCATCTTTAATTCCCATGGATGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR TCA 72 bp CCCTCCCAGACTGTGCCTCCCAGCTGTGTGTGCTCGTaGCCAAGGGCAAGGCCACTCCTAGATGAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: PSQTVPPSCVCS*PRARPLLDERE
Trigger: TTCTCTTTCATCTAGGAGTGGCCTTGCCCTTGGTCACGAGCACACACAGCTGGGAGGCACAGTCTGGGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR GCA 72 bp CAAACACCCCTGCCCCTAGGCTGGCATGCACGCCTTTaGACTCATGCCCGAGTTCACATAGGGTTCACACTG +
Preference number: 3 (lower is better)
Translates to: QTPLPLGWHARL*THARVHIGFTL
Trigger: CAGTGTGAACCCTATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR-3UTR CAA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATACTTGTAACCTTCCCATaGGTAAATGGTTTCTATAGA +
Preference number: 3 (lower is better)
Translates to: PLPLGWHARLCTHARVHILVTFP*VNGFYR
Trigger: TCTATAGAAACCATTTACCAATGGGAAGGTTACAAG...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CCA 72 bp AGGTGGCCTCAGCCTCTGACAGCTTTAGTCTCAAGCTaGACTTGTAACCTTCCCATTGGTAAATGGTTTCTA +
Preference number: 3 (lower is better)
Translates to: RWPQPLTALVSS*TCNLPIGKWFL
Trigger: TAGAAACCATTTACCAATGGGAAGGTTACAAGTCCAGCTTGAGACTAAAGCTGTCAGAGGCTGAGGCCACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACACGGAGGCGGCTTGGGTaGCACGGGCGGTGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTRRRLG*HGRWRA
Trigger: GGCACGCCACCGCCCGTGTCACCCAAGCCGCCTCCG...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACACAGCGCGAGGGGGCTTaGCGGGTACGTGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTQREGA*RVRAAR
Trigger: CCGCGCTGCACGTACCCGCCAAGCCCCCTCGCGCTG...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGGGACCGGGCCGCACCTaGAGAGCCCTCTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMGPGRT*RALWRL
Trigger: AAGCCTCCAGAGGGCTCTTCAGGTGCGGCCCGGTCC...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACACTGGGGAAGGGGGCTTaGCAGGGCTGGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTLGKGA*QGWRSA
Trigger: CGCAGAGCGCCAGCCCTGTCAAGCCCCCTTCCCCAG...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACATGGCGGCTGACGCGCTaGAGAGGGCACAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTWRLTR*RGHRRG
Trigger: CCCTCGCCTGTGCCCTCTCCAGCGCGTCAGCCGCCA...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGACAGGGCTGGCGCTCTaGGAGGGCGGCGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMTGLAL*EGGELA
Trigger: AGCTAGTTCGCCGCCCTCGCAGAGCGCCAGCCCTGT...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGACCCAGCATGGGCTGCTaGAGGCTGGGACCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRPSMGC*RLGPGR
Trigger: GCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGG...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGAGGACTGCCAGGCCCTaGAGGCCCATCGCCCAACAG +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMRTARP*RPIAQQ
Trigger: CTGTTGGGCGATGGGCCTCCAGGGCCTGGCAGTCCT...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGAGGTCCGGGAGCAGGTaGCCCTACCTCGCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMRSGSR*PYLALN
Trigger: GTTGAGGGCGAGGTAGGGCCACCTGCTCCCGGACCT...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGCGGCTAGGTTGGCACTaGCCATGGCCGAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMRLGWH*PWPSWS
Trigger: GCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCG...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACAGGCGGTGGCGTGCCATaGGCACGCTTTACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTGGGVP*ARFTSG
Trigger: CCCAGAGGTAAAGCGTGCTCATGGCACGCCACCGCC...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCAGCGCTGCTGGCGGCTaGCGCGCTGGAGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSSAAGG*RAGEGT
Trigger: TGTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCTGGCGGCTGACGCGCTaGAGAGGGCACAGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCWRLTR*RGHRRG
Trigger: CCCTCGCCTGTGCCCTCTCCAGCGCGTCAGCCGCCA...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCGCACACTGGCCCTCTTaGCGCTGTGGCCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCAHWPS*RCGHGG
Trigger: GCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGC...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCACTGGGGAAGGGGGCTTaGCAGGGCTGGCGCTCTGCG +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPLGKGA*QGWRSA
Trigger: CGCAGAGCGCCAGCCCTGTCAAGCCCCCTTCCCCAG...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGTCCGCCTTCACTGCCTaGACCAGCTCCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMSAFTA*TSSCSF
Trigger: GAAGGAGCAGGAGCTGGTGCAGGCAGTGAAGGCGGA...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGTTTGTTGCCCGGACCTaGAGAGCCGCTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMFVART*RAAEAS
Trigger: AGAGGCCTCAGCGGCTCTGCAGGTCCGGGCAACAAA...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCCCAGGTGCAGGGGGCTaGTGCCGTTGGGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFPGAGG*CRWGRW
Trigger: CCACCGACCCCAACGGCACCAGCCCCCTGCACCTGG...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCATCAGGTCAGCGGGTaGGGGCTCAGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGHQVSG*GLSRRG
Trigger: CCCCCTCCTGCTGAGCCCCCACCCGCTGACCTGATG...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCCAGCGCGGGTGTCCCTaGGGAAGGGGGCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSQRGCP*GRGLDR
Trigger: CCTGTCAAGCCCCCTTCCCCAGGGACACCCGCGCTG...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATACAGCGCGAGGGGGCTTaGCGGGTACGTGCAGCGCGG +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIQREGA*RVRAAR
Trigger: CCGCGCTGCACGTACCCGCCAAGCCCCCTCGCGCTG...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCGGCATGGTGCAGGGCTaGGAAGCCATCCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSGMVQG*EAIRVL
Trigger: CAGGACCCGGATGGCTTCTCAGCCCTGCACCATGCC...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAGGACCGGGCCGCACCTaGAGAGCCCTCTGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPGPGRT*RALWRL
Trigger: AAGCCTCCAGAGGGCTCTTCAGGTGCGGCCCGGTCC...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCCACGGTGTGTGGGTaGCTGAGGCAAGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRATVCG*LRQGTG
Trigger: CCCCGTTCCTTGCCTCAGTCACCCACACACCGTGGC...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGACCCGGATGCGCCTCTTaGGCGTGGCACTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRPGCAS*AWHWPL
Trigger: TAGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGG...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCGGTGCAGGGGGCTGGTaGCGTTGGGGTCGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFGAGGW*RWGRWC
Trigger: ACACCACCGACCCCAACGGCACCAGCCCCCTGCACC...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGGCCCCCAGTACTCCTaGCCCCGGCCACATTGCTCA +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSGPQYS*PRPHCS
Trigger: TGAGCAATGTGGCCGGGGGCAGGAGTACTGGGGGCC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGACAGCTCCTGAGAGCTaGTTATGTGCCGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMTAPES*LCAEPV
Trigger: GACGGGCTCGGCACATAAGCAGCTCTCAGGAGCTGT...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCACAGGGCTGGCGCTCTaGGAGGGCGGCGAACTAGCT +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGTGLAL*EGGELA
Trigger: AGCTAGTTCGCCGCCCTCGCAGAGCGCCAGCCCTGT...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGCCACCTCCCTGGGGTaGGCTTGGCTCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSATSLG*AWLTAC
Trigger: ACAGGCAGTGAGCCAAGCCCACCCCAGGGAGGTGGC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCTGGACCGCACCTCCTTaGGTGGGGTGCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSWTAPP*VGCQEP
Trigger: TGGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCA...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCTTGACGCTGTGGCCATaGCGGCTGGACCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSLTLWP*RLDRTS
Trigger: GGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAA...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCAGGTCCGGGAGCAGGTaGCCCTACCTCGCCCTCAAC +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSRSGSR*PYLALN
Trigger: GTTGAGGGCGAGGTAGGGCCACCTGCTCCCGGACCT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACATTTGGGTGGAGGTGGTaGGGGCCCCTTCTTACGTGG +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTFGWRW*GPLLTW
Trigger: CCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAA...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGCTGGAGCGTTTGGGTaGAGGTGGTGGGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSAGAFG*RWWGPL
Trigger: AAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCCGGCTAGGTTGGCACTaGCCATGGCCGAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSRLGWH*PWPSWS
Trigger: GCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCG...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACACTGATACACAGACAGTaGTGGGGGTGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTLIHRQ*WGWLRA
Trigger: GGCCCTGAGCCACCCCCACCACTGTCTGTGTATCAG...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAACATCAGGTCAGCGGGTaGGGGCTCAGCAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEHQVSG*GLSRRG
Trigger: CCCCCTCCTGCTGAGCCCCCACCCGCTGACCTGATG...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGCATAGCCAGCACTGGTaGAGTTGGGGGCATAGAGCT +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMHSQHW*SWGHRA
Trigger: AGCTCTATGCCCCCAACTTCACCAGTGCTGGCTATG...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS-3UTR TCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGGTATTCCTGACTTCGTaGCATAGGACTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMVFLTS*HRTARP
Trigger: GGGCCTGGCAGTCCTATGTCACGAAGTCAGGAATAC...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCGGTGTGTGGGTGACTaGGGCAAGGAACGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGRCVGD*GKERGD
Trigger: GTCACCCCGTTCCTTGCCTCAGTCACCCACACACCG...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCAGCAGGAGCCCTCACTaGATGGCTCCGACCCACACG +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSSRSPH*MAPTHT
Trigger: CGTGTGGGTCGGAGCCATTCAGTGAGGGCTCCTGCT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCCCCGGATGCGCCTCTTaGGCGTGGCACTGGCCTCTA +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFPGCAS*AWHWPL
Trigger: TAGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGG...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCTTCTTGGCTGCCAGGTaGAGGGGGCTGGTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCFLAAR*RGLVPL
Trigger: CAACGGCACCAGCCCCCTGCACCTGGCAGCCAAGAA...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCGTGGCCATTCTTGGCTaGCAGGTGCAGGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCVAILG*QVQGAG
Trigger: ACCAGCCCCCTGCACCTGGCAGCCAAGAATGGCCAC...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCGCTTTACCTCTGGGCTaGCAGGGCCTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSALPLG*QGLAVA
Trigger: TGCCACTGCCAGGCCCTGGCAGCCCAGAGGTAAAGC...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAATTGACGCTGTGGCCATaGCGGCTGGACCGCACCTCC +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPELTLWP*RLDRTS
Trigger: GGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAA...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGGAGCCCTCACTGAATaGCTCCGACCCACACGCCTC +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSGALTE*LRPTRL
Trigger: GAGGCGTGTGGGTCGGAGCCATTCAGTGAGGGCTCC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGCTGGAGCGTTTGGGTaGAGGTGGTGGGGGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEAGAFG*RWWGPL
Trigger: AAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGC...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCGGTTGGCACTGGCCATaGCCGAGCTGGAGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGGWHWP*PSWSVW
Trigger: CCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACC...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCTGGGCTGCCAGGGCCTaGCAGTGGCACCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSWAARA*QWHLLG
Trigger: TCCAAGAAGGTGCCACTGCCAGGCCCTGGCAGCCCA...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGATGGGCTGCCAGGGCCTaGCAGTGGCACCTTCTTGGA +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRWAARA*QWHLLG
Trigger: TCCAAGAAGGTGCCACTGCCAGGCCCTGGCAGCCCA...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCAGCACGCTTTACCTCTaGGCTGCCAGGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGSTLYL*AARAWQ
Trigger: CTGCCAGGCCCTGGCAGCCCAGAGGTAAAGCGTGCT...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATACAGCGCGGGTGTCCCTaGGGAAGGGGGCTTGACAGG +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIQRGCP*GRGLDR
Trigger: CCTGTCAAGCCCCCTTCCCCAGGGACACCCGCGCTG...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCATGGTGCAGGGCTaGGAAGCCATCCGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVGMVQG*EAIRVL
Trigger: CAGGACCCGGATGGCTTCTCAGCCCTGCACCATGCC...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAGCACACTGGCCCTCTTaGCGCTGTGGCCATGGCGGC +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSAHWPS*RCGHGG
Trigger: GCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGC...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCACGGTGTGTGGGTGACTaGGGCAAGGAACGGGGTGAC +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPRCVGD*GKERGD
Trigger: GTCACCCCGTTCCTTGCCTCAGTCACCCACACACCG...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATAAGGCCCAGCCTGCTCTaGGGTTGGCCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIRPSLL*GWPSAN
Trigger: GTTCGCCGAAGGCCAACCTCAGAGCAGGCTGGGCCT...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCGGAGGCAGGTGTAGGTaGGCCCTGGATCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCGGRCR*ALDLGH
Trigger: GTGTCCAAGATCCAGGGCTCACCTACACCTGCCTCC...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCTCCGCCTTCACTGCCTaGACCAGCTCCTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGSAFTA*TSSCSF
Trigger: GAAGGAGCAGGAGCTGGTGCAGGCAGTGAAGGCGGA...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTTCTTGGCTGCCAGGTaGAGGGGGCTGGTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFFLAAR*RGLVPL
Trigger: CAACGGCACCAGCCCCCTGCACCTGGCAGCCAAGAA...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACAGCCTCTCGAAGCAGTTaGTTGATCTCCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTASRSS*LISLLA
Trigger: GGCCAGCAAGGAGATCAAGCAACTGCTTCGAGAGGC...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCTTTGTTGCCCGGACCTaGAGAGCCGCTGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSFVART*RAAEAS
Trigger: AGAGGCCTCAGCGGCTCTGCAGGTCCGGGCAACAAA...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGAGCCCACCCTGTCATTaGCTGTCCGGTTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMSPPCH*LSGCHE
Trigger: TTCATGACAACCGGACAGGCAATGACAGGGTGGGCT...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGTGCTCAAGCTGCCACTaGGATCTCCACCTGCAAAAG +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMCSSCH*DLHLQK
Trigger: CTTTTGCAGGTGGAGATCGCAGTGGCAGCTTGAGCA...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCAGGCCCCCAGTACTCCTaGCCCCGGCCACATTGCTCA +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKAGPQYS*PRPHCS
Trigger: TGAGCAATGTGGCCGGGGGCAGGAGTACTGGGGGCC...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGCAGGCCGCTGATCTCTaGCGTAATCTTCTTACGGTG +
Preference number: 4 (lower is better)
Translates to: TSGQRICSEPLERPLTPMQAADL*RNLLTV
Trigger: CACCGTAAGAAGATTACGGCAGAGATCAGCGGCCTG...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS-3UTR GCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCGCTTTACCTCTGGGCTaGCAGGGCCTGGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFALPLG*QGLAVA
Trigger: TGCCACTGCCAGGCCCTGGCAGCCCAGAGGTAAAGC...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACATTCTCCTCCACTGCCTaGAGTGCTGCAGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTFSSTA*SAAAKH
Trigger: GTGTTTGGCTGCAGCACTGCAGGCAGTGGAGGAGAA...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACAGTGCCAGACTTGGTCTaGCGGTTAATGTCGATGCCG +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTVPDLV*RLMSMP
Trigger: CGGCATCGACATTAACCGCCAGACCAAGTCTGGCAC...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGATATACCTGCCCAGCATaGGCTGCTGGAGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRYTCPA*AAGGWD
Trigger: GTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATA...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCTGCACCTGCTTCAGCTaGGCCAGACAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSCTCFS*ARQGSL
Trigger: CAAGCTGCCCTGTCTGGCCCAGCTGAAGCAGGTGCA...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGATGCACCTGCTTCAGCTaGGCCAGACAGGGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRCTCFS*ARQGSL
Trigger: CAAGCTGCCCTGTCTGGCCCAGCTGAAGCAGGTGCA...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCAGGTTGTCCTCGGAGTaGGTGGCAGGTGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSRLSSE*VAGGWR
Trigger: CCTCCAACCACCTGCCACCCACTCCGAGGACAACCT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAAGCCTGGCTGAGCTTTaGTGGGCGTCTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPSLAEL*WASVGV
Trigger: CACCCCCACAGACGCCCACCAAAGCTCAGCCAGGCT...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAAGCCTGGCTGAGCTTTaGTGGGCGTCTGTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPESLAEL*WASVGV
Trigger: CACCCCCACAGACGCCCACCAAAGCTCAGCCAGGCT...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCACCTTGGCTGTGGCTaGACCATGAGGTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGHLGCG*TMRSPK
Trigger: CTTGGGGGACCTCATGGTCCAGCCACAGCCAAGGTG...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCCACCTTGGCTGTGGCTaGACCATGAGGTCCCCCAAG +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSHLGCG*TMRSPK
Trigger: CTTGGGGGACCTCATGGTCCAGCCACAGCCAAGGTG...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCGCTTCACCTTGGCTGTaGCTGGACCATGAGGTCCCC +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGASPWL*LDHEVP
Trigger: GGGGACCTCATGGTCCAGCCACAGCCAAGGTGAAGC...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCGTAGCAGCTGTGGGGTaGGCTTCACCTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCVAAVG*ASPWLW
Trigger: CCACAGCCAAGGTGAAGCCCACCCCACAGCTGCTAC...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGTAGCAGCTGTGGGGTaGGCTTCACCTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSVAAVG*ASPWLW
Trigger: CCACAGCCAAGGTGAAGCCCACCCCACAGCTGCTAC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACATGTGGGCACGTTTCTTaGGCCTCCCAGGCTCTACAT +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTCGHVS*ASQALH
Trigger: ATGTAGAGCCTGGGAGGCCCAAGAAACGTGCCCACA...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCGGGCCCCTTCTTACGTaGCCGCACAGCAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGGPLLT*PHSKGL
Trigger: CAGTCCTTTGCTGTGCGGCCACGTAAGAAGGGGCCC...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGGGCCCCTTCTTACGTaGCCGCACAGCAAAGGACTG +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSGPLLT*PHSKGL
Trigger: CAGTCCTTTGCTGTGCGGCCACGTAAGAAGGGGCCC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAGGTTGGCACTGGCCATaGCCGAGCTGGAGCGTTTGG +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPGWHWP*PSWSVW
Trigger: CCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACC...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGACTGATACACAGACAGTaGTGGGGGTGGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRLIHRQ*WGWLRA
Trigger: GGCCCTGAGCCACCCCCACCACTGTCTGTGTATCAG...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCCTCGAAGCAGTTGCTTaGTCTCCTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSLEAVA*SPCWPG
Trigger: CCCAGGCCAGCAAGGAGATCAAGCAACTGCTTCGAG...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAAGGCCCAGCCTGCTCTaGGGTTGGCCTTCGGCGAAC +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSRPSLL*GWPSAN
Trigger: GTTCGCCGAAGGCCAACCTCAGAGCAGGCTGGGCCT...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAGGCGGTGGCGTGCCATaGGCACGCTTTACCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSGGGVP*ARFTSG
Trigger: CCCAGAGGTAAAGCGTGCTCATGGCACGCCACCGCC...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCCGGAGGCGGCTTGGGTaGCACGGGCGGTGGCGTGCC +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGRRRLG*HGRWRA
Trigger: GGCACGCCACCGCCCGTGTCACCCAAGCCGCCTCCG...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCAGTGGCCATTCTTGGCTaGCAGGTGCAGGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKAVAILG*QVQGAG
Trigger: ACCAGCCCCCTGCACCTGGCAGCCAAGAATGGCCAC...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCAGACTGGCACTCTGCTaGAGCAGGCTCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFRLALC*SRLRWG
Trigger: CCCCCATCTGAGCCTGCTGCAGCAGAGTGCCAGTCT...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAAACAGCAGCTGCACCTaGTTCAGCTGGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRNSSCT*FSWARQ
Trigger: CTGTCTGGCCCAGCTGAAGCAGGTGCAGCTGCTGTT...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACACGATGCTCTTCACACTaGCAGCACTACCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTRCSSH*QHYLCP
Trigger: TGGACACAGGTAGTGCTGGCAGTGTGAAGAGCATCG...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACACCAATGGCCTCTTTGTaGTTCACAGAGGCCAACACG +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTPMASL*FTEANT
Trigger: CGTGTTGGCCTCTGTGAAGCACAAAGAGGCCATTGG...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAACACGGGCGGTGGCGTaGCATGAGCACGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPETRAVA*HEHALP
Trigger: AGGTAAAGCGTGCTCATGGCACGCCACCGCCCGTGT...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACATTCCAGCTTCTTCGGTaGCTGCTCCCCATATACCTG +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTFQLLR*LLPIYL
Trigger: CAGGTATATGGGGAGCAGCCACCGAAGAAGCTGGAA...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAAGGTTGTCCTCGGAGTaGGTGGCAGGTGGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPRLSSE*VAGGWR
Trigger: CCTCCAACCACCTGCCACCCACTCCGAGGACAACCT...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCTACCTCGCCCTCAACTaGCTGAGGCAGCACATAGGC +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSYLALN*LRQHIG
Trigger: GCCTATGTGCTGCCTCAGCCAGTTGAGGGCGAGGTA...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCATACACAGACAGTGGTaGGGGTGGCTCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGIHRQW*GWLRAS
Trigger: ACTGGCCCTGAGCCACCCCCACCACTGTCTGTGTAT...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCCAGGCTGAGACAGAATaGGCTTGGGAGAGACGGGTG +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSQAETE*AWERRV
Trigger: CACCCGTCTCTCCCAAGCCCATTCTGTCTCAGCCTG...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCAGGCTGAGACAGAATaGGCTTGGGAGAGACGGGTG +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGQAETE*AWERRV
Trigger: CACCCGTCTCTCCCAAGCCCATTCTGTCTCAGCCTG...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACAGCACGCTTTACCTCTaGGCTGCCAGGGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHSTLYL*AARAWQ
Trigger: CTGCCAGGCCCTGGCAGCCCAGAGGTAAAGCGTGCT...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCCGCCAAAGCCTTGGCTaGCTTGGGTGCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFRQSLG*LGCCRW
Trigger: CCACCTACAGCACCCAAGCCAGCCAAGGCTTTGGCG...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCATGTCGATGCCGGCCTaGAGAAGGAGCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSMSMPA*RRSLMM
Trigger: CATCATCAGGCTCCTTCTTCAGGCCGGCATCGACAT...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCCCTGTCCGGTTGTCATaGATACAGCCTTTCCACCGG +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCPVRLS*IQPFHR
Trigger: CCGGTGGAAAGGCTGTATTCATGACAACCGGACAGG...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCCAGGGGTCATACGACTaGTGGTGGGCAGGTCATAGC +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFQGSYD*WWAGHS
Trigger: GCTATGACCTGCCCACCATCAGTCGTATGACCCCTG...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAGGTGTCCCAGCTTGGTaGTACCGATCTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPGVPAW*YRSPAG
Trigger: ACCTGCAGGAGATCGGTATCACCAAGCTGGGACACC...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGTATTCCTGACTTCGTaGCATAGGACTGCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRVFLTS*HRTARP
Trigger: GGGCCTGGCAGTCCTATGTCACGAAGTCAGGAATAC...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGAGGCAGGTGTAGGTaGGCCCTGGATCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVGGRCR*ALDLGH
Trigger: GTGTCCAAGATCCAGGGCTCACCTACACCTGCCTCC...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGTTCAGGGCGGCATGGTaGAGGGCTGAGAAGCCATCC +
Preference number: 4 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVFRAAW*RAEKPS
Trigger: GGATGGCTTCTCAGCCCTGCACCATGCCGCCCTGAA...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGCCTCTCGAAGCAGTTaGTTGATCTCCTTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSASRSS*LISLLA
Trigger: GGCCAGCAAGGAGATCAAGCAACTGCTTCGAGAGGC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCACAGTAATCCTTTGTTaGCCGGACCTGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSTVILC*PDLQSR
Trigger: GCGGCTCTGCAGGTCCGGGCAACAAAGGATTACTGT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAATGCTCCCCATATACCTaGCCAGCATGGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPECSPYT*PAWAAG
Trigger: TCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCA...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCATGCTCCCCATATACCTaGCCAGCATGGGCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPCSPYT*PAWAAG
Trigger: TCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCA...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGACCAGACAGGGCAGCTTaGAGCTCTCCACTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRPDRAA*SSPLSS
Trigger: TGAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGG...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAAACAGCAGCTGCACCTaGTTCAGCTGGGCCAGACAG +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPENSSCT*FSWARQ
Trigger: CTGTCTGGCCCAGCTGAAGCAGGTGCAGCTGCTGTT...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCCAACATGGCTGCGATaGTCTTCACACTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGPTWLR*SSHCQH
Trigger: GTGCTGGCAGTGTGAAGAGCATCGCAGCCATGTTGG...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATAACACGGGCGGTGGCGTaGCATGAGCACGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHITRAVA*HEHALP
Trigger: AGGTAAAGCGTGCTCATGGCACGCCACCGCCCGTGT...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGGTCGTCGAACATGCTaGCGATGTCTTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSGRRTC*RCLPGC
Trigger: GCATCCTGGAAGACATCGGCAGCATGTTCGACGACC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCCAGGTCGTCGAACATaGTGCCGATGTCTTCCAGGA +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGPGRRT*CRCLPG
Trigger: TCCTGGAAGACATCGGCAGCATGTTCGACGACCTGG...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACCATTCAGGGCGGCATaGTGCAGGGCTGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKAPFRAA*CRAEKP
Trigger: TGGCTTCTCAGCCCTGCACCATGCCGCCCTGAATGG...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACCCATTCAGGGCGGCATaGTGCAGGGCTGAGAAGCCA +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHPFRAA*CRAEKP
Trigger: TGGCTTCTCAGCCCTGCACCATGCCGCCCTGAATGG...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCGTGCCAGACTTGGTCTaGCGGTTAATGTCGATGCCG +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGVPDLV*RLMSMP
Trigger: CGGCATCGACATTAACCGCCAGACCAAGTCTGGCAC...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCCCCAGCATGGGCTGCTaGAGGCTGGGACCGGGCCGC +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGPSMGC*RLGPGR
Trigger: GCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGG...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATATATACCTGCCCAGCATaGGCTGCTGGAGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIYTCPA*AAGGWD
Trigger: GTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATA...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGACACTGTCCTGGAAGGTaGTCATCTTGGGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRHCPGR*SSWETG
Trigger: GCCAGTCTCCCAAGATGACCACCTTCCAGGACAGTG...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACACTGAGTTCACTGTCCTaGAAGGTGGTCATCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTLSSLS*KVVILG
Trigger: TCCCAAGATGACCACCTTCCAGGACAGTGAACTCAG...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCCAAAGCCACGGTGTGTaGGTGACTGAGGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSQSHGV*VTEARN
Trigger: GTTCCTTGCCTCAGTCACCCACACACCGTGGCTTTG...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGATGTGGGCACGTTTCTTaGGCCTCCCAGGCTCTACAT +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRCGHVS*ASQALH
Trigger: ATGTAGAGCCTGGGAGGCCCAAGAAACGTGCCCACA...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAGGAGCCCTCACTGAATaGCTCCGACCCACACGCCTC +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSGALTE*LRPTRL
Trigger: GAGGCGTGTGGGTCGGAGCCATTCAGTGAGGGCTCC...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACTTTGGGTGGAGGTGGTaGGGGCCCCTTCTTACGTGG +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHFGWRW*GPLLTW
Trigger: CCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAA...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAACAAAAGCCCAGTGACTaGGCCACTGAGTGTACGGCG +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEQKPSD*ATECTA
Trigger: CGCCGTACACTCAGTGGCCCAGTCACTGGGCTTTTG...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAATACACAGACAGTGGTaGGGGTGGCTCAGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPIHRQW*GWLRAS
Trigger: ACTGGCCCTGAGCCACCCCCACCACTGTCTGTGTAT...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCAATCAGGCAGGGGCAGTaGAGGCAGCTGCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKAIRQGQ*RQLHQV
Trigger: GACCTGATGCAGCTGCCTCCACTGCCCCTGCCTGAT...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACGCCAAAGCCTTGGCTaGCTTGGGTGCTGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKARQSLG*LGCCRW
Trigger: CCACCTACAGCACCCAAGCCAGCCAAGGCTTTGGCG...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAATGTCGATGCCGGCCTaGAGAAGGAGCCTGATGATG +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPMSMPA*RRSLMM
Trigger: CATCATCAGGCTCCTTCTTCAGGCCGGCATCGACAT...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACTCGAAGCAGTTGCTTaGTCTCCTTGCTGGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKALEAVA*SPCWPG
Trigger: CCCAGGCCAGCAAGGAGATCAAGCAACTGCTTCGAG...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCACCTGTCCGGTTGTCATaGATACAGCCTTTCCACCGG +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPPVRLS*IQPFHR
Trigger: CCGGTGGAAAGGCTGTATTCATGACAACCGGACAGG...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCATCTTGGACACAGGCTaGGACAGAATGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCILDTG*DRMGLG
Trigger: TCCCAAGCCCATTCTGTCTCAGCCTGTGTCCAAGAT...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCAGCGCTGCTGGCGGCTaGCGCGCTGGAGAGGGCACA +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGSAAGG*RAGEGT
Trigger: TGTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCT...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCACAGTAATCCTTTGTTaGCCGGACCTGCAGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFTVILC*PDLQSR
Trigger: GCGGCTCTGCAGGTCCGGGCAACAAAGGATTACTGT...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCACTGCGATCTCCACCTaGAAAAGGCTTCCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSTAIST*KRLPQH
Trigger: GTGCTGAGGAAGCCTTTTGCAGGTGGAGATCGCAGT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCACTGCGATCTCCACCTaGAAAAGGCTTCCTCAGCAC +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCTAIST*KRLPQH
Trigger: GTGCTGAGGAAGCCTTTTGCAGGTGGAGATCGCAGT...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATACCTTCAGAGCCTGCATaGAAGGCATGGCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIPSEPA*KAWPPV
Trigger: TACTGGGGGCCATGCCTTGCATGCAGGCTCTGAAGG...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGCCTTCAGAGCCTGCATaGAAGGCATGGCCCCCAGTA +
Preference number: 4 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVPSEPA*KAWPPV
Trigger: TACTGGGGGCCATGCCTTGCATGCAGGCTCTGAAGG...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGATGCCTTTTGCAGCTCTaGCAGTTTCCTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRCLLQL*QFPHCQ
Trigger: CTGGCAGTGAGGAAACTGGCAGAGCTGCAAAAGGCA...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAACCAGACAGGGCAGCTTaGAGCTCTCCACTGAGTTCA +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEPDRAA*SSPLSS
Trigger: TGAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGG...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAATTTCTCAACAGCAGCTaGACCTGCTTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEFLNSS*TCFSWA
Trigger: GGCCCAGCTGAAGCAGGTGCAGCTGCTGTTGAGAAA...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCTGTCTTCCAGGATGCTaGCAGTGCTCTTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCCLPGC*QCSSPR
Trigger: TCGAGGAGAAGAGCACTGGCAGCATCCTGGAAGACA...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCCGATGTCTTCCAGGATaGTGCCAGTGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSRCLPG*CQCSSP
Trigger: AGGAGAAGAGCACTGGCAGCATCCTGGAAGACATCG...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCTCAGAGACTGACTTCTaGGAAAGCACGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSSETDF*ESTVAR
Trigger: CCTGGCAACCGTGCTTTCCCAGAAGTCAGTCTCTGA...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCTCAGAGACTGACTTCTaGGAAAGCACGGTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCSETDF*ESTVAR
Trigger: CCTGGCAACCGTGCTTTCCCAGAAGTCAGTCTCTGA...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGGCTATCTCCTGGGCTaGACTCAGAGACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRGYLLG*TQRLTS
Trigger: AGAAGTCAGTCTCTGAGTCCAGCCCAGGAGATAGCC...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGGTGGTCATCTTaGGAGACTGGCACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEGRWSS*ETGTLL
Trigger: CAGCAGAGTGCCAGTCTCCCAAGATGACCACCTTCC...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCTGGGTGGCAGGTGGTTaGAGGATTTCTCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCWVAGG*RISQQQ
Trigger: CTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCA...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTCCTCGGAGTGGGTaGCAGGTGGTTGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFCPRSG*QVVGGF
Trigger: AAATCCTCCAACCACCTGCCACCCACTCCGAGGACA...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAATGTCCTCGGAGTGGGTaGCAGGTGGTTGGAGGATTT +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPECPRSG*QVVGGF
Trigger: AAATCCTCCAACCACCTGCCACCCACTCCGAGGACA...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACGCCCTCCACCCCCAATaGAAGACAGCTCCAACATGG +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHALHPQ*KTAPTW
Trigger: CCATGTTGGAGCTGTCTTCCATTGGGGGTGGAGGGC...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCTTGACGTTCTCTTGTTaGCTCTGCTTGGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSLTFSC*LCLARM
Trigger: CATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAA...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCTTGACGTTCTCTTGTTaGCTCTGCTTGGCCCGGATG +
Preference number: 4 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGLTFSC*LCLARM
Trigger: CATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAA...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGTGAGCCCTGGATCTTaGACACAGGCTGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSVSPGS*TQAETE
Trigger: TTCTGTCTCAGCCTGTGTCCAAGATCCAGGGCTCAC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCAGCCATCATTTCAAGTaGTTGGGGTGTCTTTCGGCG +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSSHHFK*LGCLSA
Trigger: CGCCGAAAGACACCCCAATCACTTGAAATGATGGCT...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACGTGGCTGTGCCATTCTaGTACACAGACAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHVAVPF*YTDSGG
Trigger: CCCACCACTGTCTGTGTATCAGAATGGCACAGCCAC...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAATGCCTTTTGCAGCTCTaGCAGTTTCCTCACTGCCAG +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPECLLQL*QFPHCQ
Trigger: CTGGCAGTGAGGAAACTGGCAGAGCTGCAAAAGGCA...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCACCAATGGCCTCTTTGTaGTTCACAGAGGCCAACACG +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPPMASL*FTEANT
Trigger: CGTGTTGGCCTCTGTGAAGCACAAAGAGGCCATTGG...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATATTCTCCTCCACTGCCTaGAGTGCTGCAGCCAAACAC +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIFSSTA*SAAAKH
Trigger: GTGTTTGGCTGCAGCACTGCAGGCAGTGGAGGAGAA...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCCGATGTCTTCCAGGATaGTGCCAGTGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFRCLPG*CQCSSP
Trigger: AGGAGAAGAGCACTGGCAGCATCCTGGAAGACATCG...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATACACTGTCCTGGAAGGTaGTCATCTTGGGAGACTGGC +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIHCPGR*SSWETG
Trigger: GCCAGTCTCCCAAGATGACCACCTTCCAGGACAGTG...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACCAAAGCCACGGTGTGTaGGTGACTGAGGCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHQSHGV*VTEARN
Trigger: GTTCCTTGCCTCAGTCACCCACACACCGTGGCTTTG...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCATACCTCGCCCTCAACTaGCTGAGGCAGCACATAGGC +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSYLALN*LRQHIG
Trigger: GCCTATGTGCTGCCTCAGCCAGTTGAGGGCGAGGTA...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCAAGACAGCTCCAACATaGCTGCGATGCTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSKTAPT*LRCSSH
Trigger: GTGTGAAGAGCATCGCAGCCATGTTGGAGCTGTCTT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAAGCCATCATTTCAAGTaGTTGGGGTGTCTTTCGGCG +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPESHHFK*LGCLSA
Trigger: CGCCGAAAGACACCCCAATCACTTGAAATGATGGCT...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCGCCACGGTGTGTGGGTaGCTGAGGCAAGGAACGGGG +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGATVCG*LRQGTG
Trigger: CCCCGTTCCTTGCCTCAGTCACCCACACACCGTGGC...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCAAGCCCACCCTGTCATTaGCTGTCCGGTTGTCATGAA +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKASPPCH*LSGCHE
Trigger: TTCATGACAACCGGACAGGCAATGACAGGGTGGGCT...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCCCGCCTCAGCACTCTTaGCCTCAGAGGCCGAGGCTG +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGPPQHS*PQRPRL
Trigger: CAGCCTCGGCCTCTGAGGGCAAGAGTGCTGAGGCGG...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS-3UTR GCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCAGTGATACCGATCTCCTaGAGGTCCTCCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKAVIPIS*RSSQVI
Trigger: TATCACCTGGGAGGACCTGCAGGAGATCGGTATCAC...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACGTGATACCGATCTCCTaGAGGTCCTCCCAGGTGATA +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHVIPIS*RSSQVI
Trigger: TATCACCTGGGAGGACCTGCAGGAGATCGGTATCAC...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAAGGCTCACTGTCGGATaGTGCATAGCGATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPERLTVG*CIAIQA
Trigger: AGCTTGAATCGCTATGCAGCATCCGACAGTGAGCCT...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAAGGCTCACTGTCGGATaGTGCATAGCGATTCAAGCT +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPRLTVG*CIAIQA
Trigger: AGCTTGAATCGCTATGCAGCATCCGACAGTGAGCCT...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGTGTCTTCCAGGATGCTaGCAGTGCTCTTCTCCTCGA +
Preference number: 4 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVCLPGC*QCSSPR
Trigger: TCGAGGAGAAGAGCACTGGCAGCATCCTGGAAGACA...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCAAGCCATCCGGGTCCTaGAAGTTGACATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSKPSGS*KLTLIF
Trigger: GAAGATCAATGTCAACTTCCAGGACCCGGATGGCTT...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGGCCACCTCCCTGGGGTaGGCTTGGCTCACTGCCTGT +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQATSLG*AWLTAC
Trigger: ACAGGCAGTGAGCCAAGCCCACCCCAGGGAGGTGGC...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATAGGCTATCTCCTGGGCTaGACTCAGAGACTGACTTCT +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIGYLLG*TQRLTS
Trigger: AGAAGTCAGTCTCTGAGTCCAGCCCAGGAGATAGCC...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAGTAATCTTCTTACGGTaGCCTGGCTTGGTAACGCCA +
Preference number: 4 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPVIFLR*PGLVTP
Trigger: TGGCGTTACCAAGCCAGGCCACCGTAAGAAGATTAC...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATATGGGTGGCAGGTGGTTaGAGGATTTCTCAACAGCAG +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIWVAGG*RISQQQ
Trigger: CTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCA...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGAGGACTGCCAGGCCCTaGAGGCCCATCGCCCAACAG +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQRTARP*RPIAQQ
Trigger: CTGTTGGGCGATGGGCCTCCAGGGCCTGGCAGTCCT...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGTGGACCGCACCTCCTTaGGTGGGGTGCCAGGAGCCA +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQWTAPP*VGCQEP
Trigger: TGGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCA...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGTGAGCCCTGGATCTTaGACACAGGCTGAGACAGAA +
Preference number: 4 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVVSPGS*TQAETE
Trigger: TTCTGTCTCAGCCTGTGTCCAAGATCCAGGGCTCAC...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTACCTTTGTTGTCCTTaGTGTCTACAGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFYLCCP*CLQQPE
Trigger: CTCAGGCTGCTGTAGACATCAAGGACAACAAAGGTA...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGAGCAGGAGCCCTCACTaGATGGCTCCGACCCACACG +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQSRSPH*MAPTHT
Trigger: CGTGTGGGTCGGAGCCATTCAGTGAGGGCTCCTGCT...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAATCTTGGACACAGGCTaGGACAGAATGGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSILDTG*DRMGLG
Trigger: TCCCAAGCCCATTCTGTCTCAGCCTGTGTCCAAGAT...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCATACTTGGAGTATTCTaGCTTTTGCAGCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSILGVF*LLQLCQ
Trigger: CTGGCAGAGCTGCAAAAGGCAGAATACTCCAAGTAT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACCTCACTGTCGGATGCTaGATAGCGATTCAAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHLTVGC*IAIQAV
Trigger: CACAGCTTGAATCGCTATGCAGCATCCGACAGTGAG...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACTTTCCACCGGCCATCTaGATGCTGTTCAAGTACCGT +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHFPPAI*MLFKYR
Trigger: ACGGTACTTGAACAGCATCCAGATGGCCGGTGGAAA...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATATTTCCACCGGCCATCTaGATGCTGTTCAAGTACCGT +
Preference number: 4 (lower is better)
Translates to: PLPLGWHARLCTHARVHIFPPAI*MLFKYR
Trigger: ACGGTACTTGAACAGCATCCAGATGGCCGGTGGAAA...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCAGCATCAGCTTCTTTTaGTGTCCCAGCTTGGTGATA +
Preference number: 4 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSSISFF*CPSLVI
Trigger: TATCACCAAGCTGGGACACCAAAAGAAGCTGATGCT...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACTGAGTTCACTGTCCTaGAAGGTGGTCATCTTGGGA +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKALSSLS*KVVILG
Trigger: TCCCAAGATGACCACCTTCCAGGACAGTGAACTCAG...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGAAGACAGCTCCAACATaGCTGCGATGCTCTTCACAC +
Preference number: 4 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVKTAPT*LRCSSH
Trigger: GTGTGAAGAGCATCGCAGCCATGTTGGAGCTGTCTT...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CAA 72 bp TCAAACACCCCTGCCCCTAGGCTGGCATGCACGCCTTaGCACTCATGCCCGAGTTCACATAGGGTTCACACT +
Preference number: 4 (lower is better)
Translates to: SNTPAPRLACTP*HSCPSSHRVHT
Trigger: AGTGTGAACCCTATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGGTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACTACCTTTGTTGTCCTTaGTGTCTACAGCAGCCTGAG +
Preference number: 4 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHYLCCP*CLQQPE
Trigger: CTCAGGCTGCTGTAGACATCAAGGACAACAAAGGTA...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGTTCAGGGCGGCATGGTaGAGGGCTGAGAAGCCATCC +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQFRAAW*RAEKPS
Trigger: GGATGGCTTCTCAGCCCTGCACCATGCCGCCCTGAA...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGAGACTGGCACTCTGCTaGAGCAGGCTCAGATGGGGG +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQRLALC*SRLRWG
Trigger: CCCCCATCTGAGCCTGCTGCAGCAGAGTGCCAGTCT...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCATCAGGCAGGGGCAGTaGAGGCAGCTGCATCAGGTC +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGIRQGQ*RQLHQV
Trigger: GACCTGATGCAGCTGCCTCCACTGCCCCTGCCTGAT...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGGGTGTCCCAGCTTGGTaGTACCGATCTCCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQGVPAW*YRSPAG
Trigger: ACCTGCAGGAGATCGGTATCACCAAGCTGGGACACC...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCATGCCAGTTTCCTCACTaGCAGCATCAGCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSCQFPH*QHQLLL
Trigger: CAAAAGAAGCTGATGCTGGCAGTGAGGAAACTGGCA...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAGAGTATTCTGCCTTTTaGAGCTCTGCCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSEYSAF*SSASFL
Trigger: GAGGAAACTGGCAGAGCTGCAAAAGGCAGAATACTC...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCAATACTTGGAGTATTCTaGCTTTTGCAGCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RSPPQPCVAWRRASKSKAILGVF*LLQLCQ
Trigger: CTGGCAGAGCTGCAAAAGGCAGAATACTCCAAGTAT...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCACAGCTCCTGAGAGCTaGTTATGTGCCGAGCCCGTC +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGTAPES*LCAEPV
Trigger: GACGGGCTCGGCACATAAGCAGCTCTCAGGAGCTGT...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAAAGCCATCCGGGTCCTaGAAGTTGACATTGATCTTC +
Preference number: 4 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSKPSGS*KLTLIF
Trigger: GAAGATCAATGTCAACTTCCAGGACCCGGATGGCTT...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGGCCCTCCACCCCCAATaGAAGACAGCTCCAACATGG +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQALHPQ*KTAPTW
Trigger: CCATGTTGGAGCTGTCTTCCATTGGGGGTGGAGGGC...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGCAAAAGCCCAGTGACTaGGCCACTGAGTGTACGGCG +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQQKPSD*ATECTA
Trigger: CGCCGTACACTCAGTGGCCCAGTCACTGGGCTTTTG...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGTGGGACATTTACTGCTaGGCCTGCCTTCAGCACCAG +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQWDIYC*ACLQHQ
Trigger: CTGGTGCTGAAGGCAGGCTCAGCAGTAAATGTCCCA...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGCTTGCAGCTCTCCACTaGGTTCACTGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQLAALH*VHCPGR
Trigger: CCTTCCAGGACAGTGAACTCAGTGGAGAGCTGCAAG...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCCTTGCAGCTCTCCACTaGGTTCACTGTCCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGLAALH*VHCPGR
Trigger: CCTTCCAGGACAGTGAACTCAGTGGAGAGCTGCAAG...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR TCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCGTGGCTGTGCCATTCTaGTACACAGACAGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGVAVPF*YTDSGG
Trigger: CCCACCACTGTCTGTGTATCAGAATGGCACAGCCAC...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCTTTCTCAACAGCAGCTaGACCTGCTTCAGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGFLNSS*TCFSWA
Trigger: GGCCCAGCTGAAGCAGGTGCAGCTGCTGTTGAGAAA...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGGGTCGTCGAACATGCTaGCGATGTCTTCCAGGATGC +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQGRRTC*RCLPGC
Trigger: GCATCCTGGAAGACATCGGCAGCATGTTCGACGACC...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCGGAAGGTGGTCATCTTaGGAGACTGGCACTCTGCTG +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGGRWSS*ETGTLL
Trigger: CAGCAGAGTGCCAGTCTCCCAAGATGACCACCTTCC...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGCGATGCTCTTCACACTaGCAGCACTACCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQRCSSH*QHYLCP
Trigger: TGGACACAGGTAGTGCTGGCAGTGTGAAGAGCATCG...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCGGCGAACGGTGGCTGTaGCATTCTGATACACAGACA +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGGERWL*HSDTQT
Trigger: TGTCTGTGTATCAGAATGGCACAGCCACCGTTCGCC...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGGGCGAACGGTGGCTGTaGCATTCTGATACACAGACA +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQGERWL*HSDTQT
Trigger: TGTCTGTGTATCAGAATGGCACAGCCACCGTTCGCC...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCTTCCAGCTTCTTCGGTaGCTGCTCCCCATATACCTG +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGFQLLR*LLPIYL
Trigger: CAGGTATATGGGGAGCAGCCACCGAAGAAGCTGGAA...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CAA 72 bp GGGGAGGTAAAGAAATGCCAGTGTTATGCCCGACACTaGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCA +
Preference number: 4 (lower is better)
Translates to: GEVKKCQCYARH*WISKHERGEQS
Trigger: TGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACTGGCATTTCTTTACCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGTGCCAGTTTCCTCACTaGCAGCATCAGCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQCQFPH*QHQLLL
Trigger: CAAAAGAAGCTGATGCTGGCAGTGAGGAAACTGGCA...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR GCA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCGAGTATTCTGCCTTTTaGAGCTCTGCCAGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGEYSAF*SSASFL
Trigger: GAGGAAACTGGCAGAGCTGCAAAAGGCAGAATACTC...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CCA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGAGCATCAGCTTCTTTTaGTGTCCCAGCTTGGTGATA +
Preference number: 4 (lower is better)
Translates to: SVMPDTCGSANTREESSQSISFF*CPSLVI
Trigger: TATCACCAAGCTGGGACACCAAAAGAAGCTGATGCT...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
3UTR CAA 72 bp AATCTGCCTCAGCTCATTCCCAATAAATTAATACTCTaGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGC +
Preference number: 4 (lower is better)
Translates to: NLPQLIPNKLIL*IAYILGCSGAS
Trigger: GCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATTAATTTATTGGGAATGAGCTGAGGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp AGCAGCGCGAGGGGGCTTGGCGGGTACGTGCAGCGCGGGTGTCCCTaGGGAAGGGGGCTTGACAGGGCTGGCGCTCTGCGAGGGCGGCGA +
Preference number: 5 (lower is better)
Translates to: SSARGLGGYVQRGCP*GRGLDRAGALRGRR
Trigger: TCGCCGCCCTCGCAGAGCGCCAGCCCTGTCAAGCCCCCTTCCCCAGGGACACCCGCGCTGCACGTACCCGCCAAGCCCCCTCGCGCTGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp CCCAGGAGCTTGGCCTTCCCCGGCCGCGGCCTCTGCAGCAGCCTCTaGGCGGTCCCCACGTCCTCCGCCTTCACTGCCTGCACCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PRSLAFPGRGLCSSL*AVPTSSAFTACTSS
Trigger: GGAGCTGGTGCAGGCAGTGAAGGCGGAGGACGTGGGGACCGCGCAGAGGCTGCTGCAGAGGCCGCGGCCGGGGAAGGCCAAGCTCCTGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp GGACCTGTCGTGGCTTGCCGGGCACCGGGGGCACACTGGCCCTCTTaGCGCTGTGGCCATGGCGGCTGGACCGCACCTCCTTGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GPVVACRAPGAHWPS*RCGHGGWTAPPWVG
Trigger: CCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCACGACAGGTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp GCTGGCGCTCTGCGAGGGCGGCGAACTAGCTGGCTTGATGAGCGCTaGTGGCGGCTGACGCGCTGGAGAGGGCACAGGCGAGGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: AGALRGRRTSWLDER*WRLTRWRGHRRGGG
Trigger: GCCACCCCCTCGCCTGTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCTCATCAAGCCAGCTAGTTCGCCGCCCTCGCAGAGCGCCAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CGTGGCTTGCCGGGCACCGGGGGCACACTGGCCCTCTTGACGCTGTaGCCATGGCGGCTGGACCGCACCTCCTTGGGTGGGGTGCCAGGA +
Preference number: 5 (lower is better)
Translates to: RGLPGTGGTLALLTL*PWRLDRTSLGGVPG
Trigger: TCCTGGCACCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GGCGCTCTGCGAGGGCGGCGAACTAGCTGGCTTGATGAGCGCTGCTaGCGGCTGACGCGCTGGAGAGGGCACAGGCGAGGGGGTGGCGCT +
Preference number: 5 (lower is better)
Translates to: GALRGRRTSWLDERC*RLTRWRGHRRGGGA
Trigger: AGCGCCACCCCCTCGCCTGTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCTCATCAAGCCAGCTAGTTCGCCGCCCTCGCAGAGCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp TGCGAGGGCGGCGAACTAGCTGGCTTGATGAGCGCTGCTGGCGGCTaGCGCGCTGGAGAGGGCACAGGCGAGGGGGTGGCGCTGCTGGAC +
Preference number: 5 (lower is better)
Translates to: CEGGELAGLMSAAGG*RAGEGTGEGVALLD
Trigger: GTCCAGCAGCGCCACCCCCTCGCCTGTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCTCATCAAGCCAGCTAGTTCGCCGCCCTCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp TTGCCGGGCACCGGGGGCACACTGGCCCTCTTGACGCTGTGGCCATaGCGGCTGGACCGCACCTCCTTGGGTGGGGTGCCAGGAGCCATC +
Preference number: 5 (lower is better)
Translates to: LPGTGGTLALLTLWP*RLDRTSLGGVPGAI
Trigger: GATGGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp TTCTTGGTAGAGCCCAGGAGCTTGGCCTTCCCCGGCCGCGGCCTCTaGAGCAGCCTCTGCGCGGTCCCCACGTCCTCCGCCTTCACTGCC +
Preference number: 5 (lower is better)
Translates to: FLVEPRSLAFPGRGL*SSLCAVPTSSAFTA
Trigger: GGCAGTGAAGGCGGAGGACGTGGGGACCGCGCAGAGGCTGCTGCAGAGGCCGCGGCCGGGGAAGGCCAAGCTCCTGGGCTCTACCAAGAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp AGGGGGCTTGACAGGGCTGGCGCTCTGCGAGGGCGGCGAACTAGCTaGCTTGATGAGCGCTGCTGGCGGCTGACGCGCTGGAGAGGGCAC +
Preference number: 5 (lower is better)
Translates to: RGLDRAGALRGRRTS*LDERCWRLTRWRGH
Trigger: GTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCTCATCAAGCCAGCTAGTTCGCCGCCCTCGCAGAGCGCCAGCCCTGTCAAGCCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCAGCGCGAGGGGGCTaGGCGGGTACGTGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRAARGG*AGTCSA
Trigger: CGCGCTGCACGTACCCGCCAAGCCCCCTCGCGCTGC...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GGTGGCTGCTCCCCATATACCTGCCCAGCATGGGCTGCTGGAGGCTaGGACCGGGCCGCACCTGAAGAGCCCTCTGGAGGCTTGACCGGG +
Preference number: 5 (lower is better)
Translates to: GGCSPYTCPAWAAGG*DRAAPEEPSGGLTG
Trigger: CCCGGTCAAGCCTCCAGAGGGCTCTTCAGGTGCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCAGCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CTGGAGCCGGCTCGTCGGCTAGGTTGGCACTGGCCATGGCCGAGCTaGAGCGTTTGGGTGGAGGTGGTGGGGGCCCCTTCTTACGTGGCC +
Preference number: 5 (lower is better)
Translates to: LEPARRLGWHWPWPS*SVWVEVVGAPSYVA
Trigger: GGCCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCGACGAGCCGGCTCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp CTTCCTCAGCACCCAGATCTCCTCCGGGGGTGCAGAGGGACCCAGTaGGCCACCTCCCTGGGGTGGGCTTGGCTCACTGCCTGTCCGGGA +
Preference number: 5 (lower is better)
Translates to: LPQHPDLLRGCRGTQ*ATSLGWAWLTACPG
Trigger: TCCCGGACAGGCAGTGAGCCAAGCCCACCCCAGGGAGGTGGCTCACTGGGTCCCTCTGCACCCCCGGAGGAGATCTGGGTGCTGAGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp TACCTGCCCAGCATGGGCTGCTGGAGGCTGGGACCGGGCCGCACCTaGAGAGCCCTCTGGAGGCTTGACCGGGCTATCTCCTGGGCTGGA +
Preference number: 5 (lower is better)
Translates to: YLPSMGCWRLGPGRT*RALWRLDRAISWAG
Trigger: TCCAGCCCAGGAGATAGCCCGGTCAAGCCTCCAGAGGGCTCTTCAGGTGCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp CTACCTGTGTCCACACTGCCGGCGAGATCACTAGCCCGACGGCGTTaGGCCCGGACCCCTAGCCGGCCGTCCTCTGCCTCAACGTCTGGA +
Preference number: 5 (lower is better)
Translates to: LPVSTLPARSLARRR*ARTPSRPSSASTSG
Trigger: TCCAGACGTTGAGGCAGAGGACGGCCGGCTAGGGGTCCGGGCGCAACGCCGTCGGGCTAGTGATCTCGCCGGCAGTGTGGACACAGGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CAGATCTCCTCCGGGGGTGCAGAGGGACCCAGTGAGCCACCTCCCTaGGGTGGGCTTGGCTCACTGCCTGTCCGGGAACCTGCTCGCTTG +
Preference number: 5 (lower is better)
Translates to: QISSGGAEGPSEPPP*GGLGSLPVREPARL
Trigger: CAAGCGAGCAGGTTCCCGGACAGGCAGTGAGCCAAGCCCACCCCAGGGAGGTGGCTCACTGGGTCCCTCTGCACCCCCGGAGGAGATCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CTGTGGGGGTGTGAAGTGGCTGGCACCAGACGGAAGGACCTGTCGTaGCTTGCCGGGCACCGGGGGCACACTGGCCCTCTTGACGCTGTG +
Preference number: 5 (lower is better)
Translates to: LWGCEVAGTRRKDLS*LAGHRGHTGPLDAV
Trigger: CACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCACGACAGGTCCTTCCGTCTGGTGCCAGCCACTTCACACCCCCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CCTCAACGTCTGGAGCCGGCTCGTCGGCTAGGTTGGCACTGGCCATaGCCGAGCTGGAGCGTTTGGGTGGAGGTGGTGGGGGCCCCTTCT +
Preference number: 5 (lower is better)
Translates to: PQRLEPARRLGWHWP*PSWSVWVEVVGAPS
Trigger: AGAAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCGACGAGCCGGCTCCAGACGTTGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GGCCGTCCTCTGCCTCAACGTCTGGAGCCGGCTCGTCGGCTAGGTTaGCACTGGCCATGGCCGAGCTGGAGCGTTTGGGTGGAGGTGGTG +
Preference number: 5 (lower is better)
Translates to: GRPLPQRLEPARRLG*HWPWPSWSVWVEVV
Trigger: CACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCGACGAGCCGGCTCCAGACGTTGAGGCAGAGGACGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCGCCGAGCTGGAGCGTTaGGGTGGAGGTGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGAELER*GGGGGG
Trigger: GCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGC...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCCGAGCTGGAGCGTTaGGGTGGAGGTGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRAELER*GGGGGG
Trigger: GCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGC...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp CCTGAGGGGAGCCTGGCTGAGCTTTGGTGGGCGTCTGTGGGGGTGTaGAGTGGCTGGCACCAGACGGAAGGACCTGTCGTGGCTTGCCGG +
Preference number: 5 (lower is better)
Translates to: PEGSLAELWWASVGV*SGWHQTEGPVVACR
Trigger: CCGGCAAGCCACGACAGGTCCTTCCGTCTGGTGCCAGCCACTTCACACCCCCACAGACGCCCACCAAAGCTCAGCCAGGCTCCCCTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp AGCCTTGGCTGGCTTGGGTGCTGTAGGTGGCGGAGGCGGCTTGGGTaGCACGGGCGGTGGCGTGCCATGAGCACGCTTTACCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: SLGWLGCCRWRRRLG*HGRWRAMSTLYLWA
Trigger: AGCCCAGAGGTAAAGCGTGCTCATGGCACGCCACCGCCCGTGTCACCCAAGCCGCCTCCGCCACCTACAGCACCCAAGCCAGCCAAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp GACTGCCAGGCCCTGGAGGCCCATCGCCCAACAGCTCCTGAGAGCTaGTTATGTGCCGAGCCCGTCCACTCAGGCTGGACTCCCGAGAGG +
Preference number: 5 (lower is better)
Translates to: DCQALEAHRPTAPES*LCAEPVHSGWTPER
Trigger: CCTCTCGGGAGTCCAGCCTGAGTGGACGGGCTCGGCACATAAGCAGCTCTCAGGAGCTGTTGGGCGATGGGCCTCCAGGGCCTGGCAGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CCCAAGGGCCTGAGGGGAGCCTGGCTGAGCTTTGGTGGGCGTCTGTaGGGGTGTGAAGTGGCTGGCACCAGACGGAAGGACCTGTCGTGG +
Preference number: 5 (lower is better)
Translates to: PKGLRGAWLSFGGRL*GCEVAGTRRKDLSW
Trigger: CCACGACAGGTCCTTCCGTCTGGTGCCAGCCACTTCACACCCCCACAGACGCCCACCAAAGCTCAGCCAGGCTCCCCTCAGGCCCTTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GCTCGTCGGCTAGGTTGGCACTGGCCATGGCCGAGCTGGAGCGTTTaGGTGGAGGTGGTGGGGGCCCCTTCTTACGTGGCCGCACAGCAA +
Preference number: 5 (lower is better)
Translates to: ARRLGWHWPWPSWSV*VEVVGAPSYVAAQQ
Trigger: TTGCTGTGCGGCCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCGACGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GGGTGGCTTCACAGGCTTCCGTGCATTGCCATCAGGCAGGGGCAGTaGAGGCAGCTGCATCAGGTCAGCGGGTGGGGGCTCAGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GWLHRLPCIAIRQGQ*RQLHQVSGWGLSRR
Trigger: CCTCCTGCTGAGCCCCCACCCGCTGACCTGATGCAGCTGCCTCCACTGCCCCTGCCTGATGGCAATGCACGGAAGCCTGTGAAGCCACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAACTGGACCGCACCTCCTaGGGTGGGGTGCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPELDRTS*GGVPGA
Trigger: GGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCAG...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCGCCCGGATGCGCCTCTaGAGCGTGGCACTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCARMRL*SVALAS
Trigger: AGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGGC...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAGCAGCGCGAGGGGGCTaGGCGGGTACGTGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSAARGG*AGTCSA
Trigger: CGCGCTGCACGTACCCGCCAAGCCCCCTCGCGCTGC...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp GCTGAGGCCGATTCCAGCTTCTTCGGTGGCTGCTCCCCATATACCTaGCCAGCATGGGCTGCTGGAGGCTGGGACCGGGCCGCACCTGAA +
Preference number: 5 (lower is better)
Translates to: AEADSSFFGGCSPYT*PAWAAGGWDRAAPE
Trigger: TTCAGGTGCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCAGCCACCGAAGAAGCTGGAATCGGCCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp CCCTCAGAGGCCGAGGCTGAGGCCGATTCCAGCTTCTTCGGTGGCTaGTCCCCATATACCTGCCCAGCATGGGCTGCTGGAGGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: PSEAEAEADSSFFGG*SPYTCPAWAAGGWD
Trigger: GTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCAGCCACCGAAGAAGCTGGAATCGGCCTCAGCCTCGGCCTCTGAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CAGGAGCCCTCACTGAATGGCTCCGACCCACACGCCTCTGGACTGTaGCATAGGGTCCAGCGGCAGCCGGCACCAGCAGCTCATCCCTCT +
Preference number: 5 (lower is better)
Translates to: QEPSLNGSDPHASGL*HRVQRQPAPAAHPS
Trigger: AGAGGGATGAGCTGCTGGTGCCGGCTGCCGCTGGACCCTATGCCACAGTCCAGAGGCGTGTGGGTCGGAGCCATTCAGTGAGGGCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GTTGGCACTGGCCATGGCCGAGCTGGAGCGTTTGGGTGGAGGTGGTaGGGGCCCCTTCTTACGTGGCCGCACAGCAAAGGACTGACTGCG +
Preference number: 5 (lower is better)
Translates to: VGTGHGRAGAFGWRW*GPLLTWPHSKGLTA
Trigger: CGCAGTCAGTCCTTTGCTGTGCGGCCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCAGCCCGGATGCGCCTCTaGAGCGTGGCACTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPARMRL*SVALAS
Trigger: AGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGGC...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp GACATAGGACTGCCAGGCCCTGGAGGCCCATCGCCCAACAGCTCCTaGGAGCTGCTTATGTGCCGAGCCCGTCCACTCAGGCTGGACTCC +
Preference number: 5 (lower is better)
Translates to: DIGLPGPGGPSPNSS*ELLMCRARPLRLDS
Trigger: GGAGTCCAGCCTGAGTGGACGGGCTCGGCACATAAGCAGCTCTCAGGAGCTGTTGGGCGATGGGCCTCCAGGGCCTGGCAGTCCTATGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp GCCACCTCCCTGGGGTGGGCTTGGCTCACTGCCTGTCCGGGAACCTaGTCGCTTGACAATAGCCTCCCCCAGGGAAGATGGGAAGTAGCC +
Preference number: 5 (lower is better)
Translates to: ATSLGWAWLTACPGT*SLDNSLPQGRWEVA
Trigger: GGCTACTTCCCATCTTCCCTGGGGGAGGCTATTGTCAAGCGAGCAGGTTCCCGGACAGGCAGTGAGCCAAGCCCACCCCAGGGAGGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GATTCCAGCTTCTTCGGTGGCTGCTCCCCATATACCTGCCCAGCATaGGCTGCTGGAGGCTGGGACCGGGCCGCACCTGAAGAGCCCTCT +
Preference number: 5 (lower is better)
Translates to: DSSFFGGCSPYTCPA*AAGGWDRAAPEEPS
Trigger: AGAGGGCTCTTCAGGTGCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCAGCCACCGAAGAAGCTGGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CCTCTTGACGCTGTGGCCATGGCGGCTGGACCGCACCTCCTTGGGTaGGGTGCCAGGAGCCATCCCCTCATCCAGCAGGTATTCCTGACT +
Preference number: 5 (lower is better)
Translates to: PLDAVAMAAGPHLLG*GARSHPLIQQVFLT
Trigger: AGTCAGGAATACCTGCTGGATGAGGGGATGGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCACCGCCTCAGCACTCTaGCCCTCAGAGGCCGAGGCT +
Preference number: 5 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFTASAL*PSEAEA
Trigger: AGCCTCGGCCTCTGAGGGCAAGAGTGCTGAGGCGGT...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS-3UTR CAA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGTGGAAGGTGGTCATCTaGGGAGACTGGCACTCTGCT +
Preference number: 5 (lower is better)
Translates to: TSGQRICSEPLERPLTPMWKVVI*GDWHSA
Trigger: AGCAGAGTGCCAGTCTCCCAAGATGACCACCTTCCA...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCACTGGACCGCACCTCCTaGGGTGGGGTGCCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSLDRTS*GGVPGA
Trigger: GGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCAG...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp TTGGGTGGGGTGCCAGGAGCCATCCCCTCATCCAGCAGGTATTCCTaGCTTCGTGACATAGGACTGCCAGGCCCTGGAGGCCCATCGCCC +
Preference number: 5 (lower is better)
Translates to: LGGVPGAIPSSSRYS*LRDIGLPGPGGPSP
Trigger: GGGCGATGGGCCTCCAGGGCCTGGCAGTCCTATGTCACGAAGTCAGGAATACCTGCTGGATGAGGGGATGGCTCCTGGCACCCCACCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp GCCTGCTCTGAGGTTGGCCTTCGGCGAACGGTGGCTGTGCCATTCTaGTACACAGACAGTGGTGGGGGTGGCTCAGGGCCAGTGTCAGGC +
Preference number: 5 (lower is better)
Translates to: ACSEVGLRRTVAVPF*YTDSGGGGSGPVSG
Trigger: GCCTGACACTGGCCCTGAGCCACCCCCACCACTGTCTGTGTATCAGAATGGCACAGCCACCGTTCGCCGAAGGCCAACCTCAGAGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp GAATGGGCTTGGGAGAGACGGGTGGCTTCACAGGCTTCCGTGCATTaGCATCAGGCAGGGGCAGTGGAGGCAGCTGCATCAGGTCAGCGG +
Preference number: 5 (lower is better)
Translates to: EWAWERRVASQASVH*HQAGAVEAAASGQR
Trigger: CCGCTGACCTGATGCAGCTGCCTCCACTGCCCCTGCCTGATGGCAATGCACGGAAGCCTGTGAAGCCACCCGTCTCTCCCAAGCCCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp ACAGCTCCTGAGAGCTGCTTATGTGCCGAGCCCGTCCACTCAGGCTaGACTCCCGAGAGGTTGTCCTCGGAGTGGGTGGCAGGTGGTTGG +
Preference number: 5 (lower is better)
Translates to: TAPESCLCAEPVHSG*TPERLSSEWVAGGW
Trigger: CCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCCTGAGTGGACGGGCTCGGCACATAAGCAGCTCTCAGGAGCTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACATACAGTAATCCTTTGTaGCCCGGACCTGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTYSNPL*PGPAEP
Trigger: CGGCTCTGCAGGTCCGGGCAACAAAGGATTACTGTA...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCGCCAGACAGGGCAGCTaGCAGCTCTCCACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCARQGS*QLSTEF
Trigger: GAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGC...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCGGCAGTGGCACCTTCTaGGAGGCAGGTGTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGGSGTF*EAGVGE
Trigger: CTCACCTACACCTGCCTCCAAGAAGGTGCCACTGCC...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp CCACTGACTGACCGCCTCAGCACTCTTGCCCTCAGAGGCCGAGGCTaGGGCCGATTCCAGCTTCTTCGGTGGCTGCTCCCCATATACCTG +
Preference number: 5 (lower is better)
Translates to: PLTDRLSTLALRGRG*GRFQLLRWLLPIYL
Trigger: CAGGTATATGGGGAGCAGCCACCGAAGAAGCTGGAATCGGCCTCAGCCTCGGCCTCTGAGGGCAAGAGTGCTGAGGCGGTCAGTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS TCA 90 bp AGTTGGGGGCATAGAGCTGTAGCTGGAATGTGGCAAGCCACTGACTaGCCGCCTCAGCACTCTTGCCCTCAGAGGCCGAGGCTGAGGCCG +
Preference number: 5 (lower is better)
Translates to: SWGHRAVAGMWQATD*PPQHSCPQRPRLRP
Trigger: CGGCCTCAGCCTCGGCCTCTGAGGGCAAGAGTGCTGAGGCGGTCAGTCAGTGGCTTGCCACATTCCAGCTACAGCTCTATGCCCCCAACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS TCA 90 bp GGTGCCAGGAGCCATCCCCTCATCCAGCAGGTATTCCTGACTTCGTaGCATAGGACTGCCAGGCCCTGGAGGCCCATCGCCCAACAGCTC +
Preference number: 5 (lower is better)
Translates to: GARSHPLIQQVFLTS*HRTARPWRPIAQQL
Trigger: GAGCTGTTGGGCGATGGGCCTCCAGGGCCTGGCAGTCCTATGTCACGAAGTCAGGAATACCTGCTGGATGAGGGGATGGCTCCTGGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp CCTCGGAGTGGGTGGCAGGTGGTTGGAGGATTTCTCAACAGCAGCTaGACCTGCTTCAGCTGGGCCAGACAGGGCAGCTTGCAGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PRSGWQVVGGFLNSS*TCFSWARQGSLQLS
Trigger: GGAGAGCTGCAAGCTGCCCTGTCTGGCCCAGCTGAAGCAGGTGCAGCTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp CCCGCCCTCCACCCCCAATGGAAGACAGCTCCAACATGGCTGCGATaGTCTTCACACTGCCAGCACTACCTGTGTCCACACTGCCGGCGA +
Preference number: 5 (lower is better)
Translates to: PALHPQWKTAPTWLR*SSHCQHYLCPHCRR
Trigger: TCGCCGGCAGTGTGGACACAGGTAGTGCTGGCAGTGTGAAGAGCATCGCAGCCATGTTGGAGCTGTCTTCCATTGGGGGTGGAGGGCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp CGGCGCCGGTTCACCACTTCACCGTCAGGCCCAATGGCCTCTTTGTaGTTCACAGAGGCCAACACGGTAGCTACTCGGCCCGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RRRFTTSPSGPMASL*FTEANTVATRPGSG
Trigger: TCCAGAACCGGGCCGAGTAGCTACCGTGTTGGCCTCTGTGAAGCACAAAGAGGCCATTGGGCCTGACGGTGAAGTGGTGAACCGGCGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GGCTGGACTCCCGAGAGGTTGTCCTCGGAGTGGGTGGCAGGTGGTTaGAGGATTTCTCAACAGCAGCTGCACCTGCTTCAGCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: GWTPERLSSEWVAGG*RISQQQLHLLQLGQ
Trigger: CTGGCCCAGCTGAAGCAGGTGCAGCTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GAGCCCGTCCACTCAGGCTGGACTCCCGAGAGGTTGTCCTCGGAGTaGGTGGCAGGTGGTTGGAGGATTTCTCAACAGCAGCTGCACCTG +
Preference number: 5 (lower is better)
Translates to: EPVHSGWTPERLSSE*VAGGWRISQQQLHL
Trigger: CAGGTGCAGCTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCCTGAGTGGACGGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CAAAGCCACGGTGTGTGGGTGACTGAGGCAAGGAACGGGGTGACATaGGCCGGTCTGTTGGTGGTAGCAGCTGTGGGGTGGGCTTCACCT +
Preference number: 5 (lower is better)
Translates to: QSHGVWVTEARNGVT*AGLLVVAAVGWASP
Trigger: AGGTGAAGCCCACCCCACAGCTGCTACCACCAACAGACCGGCCCATGTCACCCCGTTCCTTGCCTCAGTCACCCACACACCGTGGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CGCCCTCAACTGGCTGAGGCAGCACATAGGCAAAGCCACGGTGTGTaGGTGACTGAGGCAAGGAACGGGGTGACATGGGCCGGTCTGTTG +
Preference number: 5 (lower is better)
Translates to: RPQLAEAAHRQSHGV*VTEARNGVTWAGLL
Trigger: CAACAGACCGGCCCATGTCACCCCGTTCCTTGCCTCAGTCACCCACACACCGTGGCTTTGCCTATGTGCTGCCTCAGCCAGTTGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp ACCAGCGGGCAGCGCATCTGCTCAGAGCCCTTGGAGCGCCCCCTGACCCCCATGGGTGTCTTTCCAGAGTaGTCTACCATACAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: TSGQRICSEPLERPLTPMGVFPE*STIQGL
Trigger: CAACCCCTGTATGGTAGACAACTCTGGAAAGACACC...CATGGGGGTCAGGGGGCGCTCCAAGGGCTCTGAGCAGATGCGCTGCCCGCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCGGGCCAGACCAATCATaGACAGCCACACAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSGPDQS*TATQPG
Trigger: ACCTGGCTGTGTGGCTGTCAATGATTGGTCTGGCCC...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCGGGCCAGACCAATCATaGACAGCCACACAGCCAGGT +
Preference number: 5 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSGPDQS*TATQPG
Trigger: ACCTGGCTGTGTGGCTGTCAATGATTGGTCTGGCCC...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp GGAGGTGGTGGGGGCCCCTTCTTACGTGGCCGCACAGCAAAGGACTaGCTGCGGTTAACATTCTTGTCCGTGCCAGCAGGAGCCCTCACT +
Preference number: 5 (lower is better)
Translates to: GGGGGPFLRGRTAKD*LRLTFLSVPAGALT
Trigger: AGTGAGGGCTCCTGCTGGCACGGACAAGAATGTTAACCGCAGTCAGTCCTTTGCTGTGCGGCCACGTAAGAAGGGGCCCCCACCACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp AGACAGAATGGGCTTGGGAGAGACGGGTGGCTTCACAGGCTTCCGTaGATTGCCATCAGGCAGGGGCAGTGGAGGCAGCTGCATCAGGTC +
Preference number: 5 (lower is better)
Translates to: RQNGLGRDGWLHRLP*IAIRQGQWRQLHQV
Trigger: GACCTGATGCAGCTGCCTCCACTGCCCCTGCCTGATGGCAATGCACGGAAGCCTGTGAAGCCACCCGTCTCTCCCAAGCCCATTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GGGCCAGACAGGGCAGCTTGCAGCTCTCCACTGAGTTCACTGTCCTaGAAGGTGGTCATCTTGGGAGACTGGCACTCTGCTGCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: GPDRAACSSPLSSLS*KVVILGDWHSAAAG
Trigger: GCCTGCTGCAGCAGAGTGCCAGTCTCCCAAGATGACCACCTTCCAGGACAGTGAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CCGTCCACTCAGGCTGGACTCCCGAGAGGTTGTCCTCGGAGTGGGTaGCAGGTGGTTGGAGGATTTCTCAACAGCAGCTGCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: PSTQAGLPRGCPRSG*QVVGGFLNSSCTCF
Trigger: GAAGCAGGTGCAGCTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCCTGAGTGGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp TACCCGGGCAAGGGGAGGACCCTCCGCACTTGCCTCACCCTTAGCTaGACCTCGAAGCCGTTGTCGGGCTGTGCCATCCTCCATAAAATG +
Preference number: 5 (lower is better)
Translates to: YPGKGRTLRTCLTLS*TSKPLSGCAILHKM
Trigger: CATTTTATGGAGGATGGCACAGCCCGACAACGGCTTCGAGGTCCAGCTAAGGGTGAGGCAAGTGCGGAGGGTCCTCCCCTTGCCCGGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GCGAACGGTGGCTGTGCCATTCTGATACACAGACAGTGGTGGGGGTaGCTCAGGGCCAGTGTCAGGCTCCTTAGCCTTAGGCCTGCGCTT +
Preference number: 5 (lower is better)
Translates to: ANGGCAILIHRQWWG*LRASVRLLSLRPAL
Trigger: AAGCGCAGGCCTAAGGCTAAGGAGCCTGACACTGGCCCTGAGCCACCCCCACCACTGTCTGTGTATCAGAATGGCACAGCCACCGTTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CCTTCGGCGAACGGTGGCTGTGCCATTCTGATACACAGACAGTGGTaGGGGTGGCTCAGGGCCAGTGTCAGGCTCCTTAGCCTTAGGCCT +
Preference number: 5 (lower is better)
Translates to: PSANGGCAILIHRQW*GWLRASVRLLSLRP
Trigger: AGGCCTAAGGCTAAGGAGCCTGACACTGGCCCTGAGCCACCCCCACCACTGTCTGTGTATCAGAATGGCACAGCCACCGTTCGCCGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp TGGCCTTCGGCGAACGGTGGCTGTGCCATTCTGATACACAGACAGTaGTGGGGGTGGCTCAGGGCCAGTGTCAGGCTCCTTAGCCTTAGG +
Preference number: 5 (lower is better)
Translates to: WPSANGGCAILIHRQ*WGWLRASVRLLSLR
Trigger: CCTAAGGCTAAGGAGCCTGACACTGGCCCTGAGCCACCCCCACCACTGTCTGTGTATCAGAATGGCACAGCCACCGTTCGCCGAAGGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp ACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGAGCAGAGCTGTGCCAGACTaGGTCTGGCGGTTAATGTCG +
Preference number: 5 (lower is better)
Translates to: TGSSRQEWAPAGSASAQSRAVPD*VWRLMS
Trigger: CGACATTAACCGCCAGACCAAGTCTGGCACAGCTCT...GCTCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCTGTCCAGACCCCCTCCCCACTTCCTAGAGCCCTAGCCTGGGCGGCCCACACAGGAGTATTCTGCCTTTaGCAGCTCTGCCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PVQTPSPLPRALAWAAHTGVFCL*QLCQFP
Trigger: AGGAAACTGGCAGAGCTGCAAAAGGCAGAATACTCC...TGTGTGGGCCGCCCAGGCTAGGGCTCTAGGAAGTGGGGAGGGGGTCTGGACAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACTGTGGGCACGTTTCTaGGGCCTCCCAGGCTCTACA +
Preference number: 5 (lower is better)
Translates to: RSPPQPCVAWRRASKSKALWARF*GLPGST
Trigger: TGTAGAGCCTGGGAGGCCCAAGAAACGTGCCCACAG...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGCTGTGGGCACGTTTCTaGGGCCTCCCAGGCTCTACA +
Preference number: 5 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVLWARF*GLPGST
Trigger: TGTAGAGCCTGGGAGGCCCAAGAAACGTGCCCACAG...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGCCCAATGGCCTCTTaGTGCTTCACAGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEGPMAS*CFTEAN
Trigger: GTTGGCCTCTGTGAAGCACAAAGAGGCCATTGGGCC...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATATCTTGTTGGCTCTGCTaGGCCCGGATGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: PLPLGWHARLCTHARVHISCWLC*ARMRLL
Trigger: CAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGA...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACGGCAGTGGCACCTTCTaGGAGGCAGGTGTAGGTGAG +
Preference number: 5 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHGSGTF*EAGVGE
Trigger: CTCACCTACACCTGCCTCCAAGAAGGTGCCACTGCC...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp CTGACTGCGGTTAACATTCTTGTCCGTGCCAGCAGGAGCCCTCACTaGATGGCTCCGACCCACACGCCTCTGGACTGTGGCATAGGGTCC +
Preference number: 5 (lower is better)
Translates to: LTAVNILVRASRSPH*MAPTHTPLDCGIGS
Trigger: GGACCCTATGCCACAGTCCAGAGGCGTGTGGGTCGGAGCCATTCAGTGAGGGCTCCTGCTGGCACGGACAAGAATGTTAACCGCAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp AGTGGGTGGCAGGTGGTTGGAGGATTTCTCAACAGCAGCTGCACCTaGTTCAGCTGGGCCAGACAGGGCAGCTTGCAGCTCTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: SGWQVVGGFLNSSCT*FSWARQGSLQLSTE
Trigger: CTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGCCCAGCTGAAGCAGGTGCAGCTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CGAGCTGGAGCGTTTGGGTGGAGGTGGTGGGGGCCCCTTCTTACGTaGCCGCACAGCAAAGGACTGACTGCGGTTAACATTCTTGTCCGT +
Preference number: 5 (lower is better)
Translates to: RAGAFGWRWWGPLLT*PHSKGLTAVNILVR
Trigger: ACGGACAAGAATGTTAACCGCAGTCAGTCCTTTGCTGTGCGGCCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGCTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAATACAGTAATCCTTTGTaGCCCGGACCTGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEYSNPL*PGPAEP
Trigger: CGGCTCTGCAGGTCCGGGCAACAAAGGATTACTGTA...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACGCCAGGTTAGCGGGTTaGTGTTCAGGCAGCCAGTCA +
Preference number: 5 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHARLAG*CSGSQS
Trigger: TGACTGGCTGCCTGAACACAAACCCGCTAACCTGGC...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS-3UTR CAA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGATTTTGGTGTCCCAGCTaGGTGATACCGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRFWCPS*VIPISC
Trigger: GCAGGAGATCGGTATCACCAAGCTGGGACACCAAAA...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAGCCAGACAGGGCAGCTaGCAGCTCTCCACTGAGTTC +
Preference number: 5 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSARQGS*QLSTEF
Trigger: GAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGC...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCGAATTTGACGTTCTCTaGTTGGCTCTGCTTGGCCCG +
Preference number: 5 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGEFDVL*LALLGP
Trigger: CGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTC...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCAAGTCCCGCCAAAGCCTaGGCTGGCTTGGGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSSPAKA*AGLGAV
Trigger: TACAGCACCCAAGCCAGCCAAGGCTTTGGCGGGACT...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp CAAATGCAGGGGTATGTGGCCTTCGTCGGATGGGACATTTACTGCTaGGCCTGCCTTCAGCACCAGCTTCATGGGCTCCTTCCGGCCCTG +
Preference number: 5 (lower is better)
Translates to: QMQGYVAFVGWDIYC*ACLQHQLHGLLPAL
Trigger: CAGGGCCGGAAGGAGCCCATGAAGCTGGTGCTGAAGGCAGGCTCAGCAGTAAATGTCCCATCCGACGAAGGCCACATACCCCTGCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp CACCTGCTTCAGCTGGGCCAGACAGGGCAGCTTGCAGCTCTCCACTaGGTTCACTGTCCTGGAAGGTGGTCATCTTGGGAGACTGGCACT +
Preference number: 5 (lower is better)
Translates to: HLLQLGQTGQLAALH*VHCPGRWSSWETGT
Trigger: AGTGCCAGTCTCCCAAGATGACCACCTTCCAGGACAGTGAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGCCCAGCTGAAGCAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp GCCGTTGTCCACCAGCACCTTGTAATACTGGGCCAGACCAATCATTaGCAGCCACACAGCCAGGTTAGCCTTGCCCTCAGAGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: AVVHQHLVILGQTNH*QPHSQVSLALRGRG
Trigger: GCCTCGGCCTCTGAGGGCAAGGCTAACCTGGCTGTGTGGCTGTCAATGATTGGTCTGGCCCAGTATTACAAGGTGCTGGTGGACAACGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234717.2
CDS GCA 90 bp CTACAGCAGCCTGAGCCTCCAGCAGCAGAGAGATCAATTCTGTGTTaGCATTCAGGGCGGCATGGTGCAGGGCTGAGAAGCCATCCGGGT +
Preference number: 5 (lower is better)
Translates to: LQQPEPPAAERSILC*HSGRHGAGLRSHPG
Trigger: ACCCGGATGGCTTCTCAGCCCTGCACCATGCCGCCCTGAATGGCAACACAGAATTGATCTCTCTGCTGCTGGAGGCTCAGGCTGCTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp AATAGCCCGCCCTCCACCCCCAATGGAAGACAGCTCCAACATGGCTaGGATGCTCTTCACACTGCCAGCACTACCTGTGTCCACACTGCC +
Preference number: 5 (lower is better)
Translates to: NSPPSTPNGRQLQHG*DALHTASTTCVHTA
Trigger: GGCAGTGTGGACACAGGTAGTGCTGGCAGTGTGAAGAGCATCGCAGCCATGTTGGAGCTGTCTTCCATTGGGGGTGGAGGGCGGGCTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp CTCTTCTCCTCGATGGAGGAGGGGCGAGGGCCTTGTCCATCTTCCTaGCTTATCTTCTCCTCCACTGCCTGCAGTGCTGCAGCCAAACAC +
Preference number: 5 (lower is better)
Translates to: LFSSMEEGRGPCPSS*LIFSSTACSAAAKH
Trigger: GTGTTTGGCTGCAGCACTGCAGGCAGTGGAGGAGAAGATAAGGCAGGAAGATGGACAAGGCCCTCGCCCCTCCTCCATCGAGGAGAAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCGGCCGCATACCTTTGTaGTCCTTGATGTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGGRIPL*SLMSTA
Trigger: TGCTGTAGACATCAAGGACAACAAAGGTATGCGGCC...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCCTGTGCGGTGTCTTTCCAGAGTaGTCTACCATACAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: AAGRGSPMGSSVLGIGLCGVFPE*STIQGL
Trigger: CAACCCCTGTATGGTAGACAACTCTGGAAAGACACC...GCACAGGCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACAGAGCTGTGCCAGACTaGGTCTGGCGGTTAATGTCG +
Preference number: 5 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHRAVPD*VWRLMS
Trigger: CGACATTAACCGCCAGACCAAGTCTGGCACAGCTCT...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCATCTCGAAGCAGTTGCTaGATCTCCTTGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RSPPQPCVAWRRASKSKASRSSC*ISLLAW
Trigger: CCAGGCCAGCAAGGAGATCAAGCAACTGCTTCGAGA...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCCCTGCCCCTAGGCTGGCATGCACGCCTTTGCACTCATGCCCGAGTTCACATATCTCGAAGCAGTTGCTaGATCTCCTTGCTGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PLPLGWHARLCTHARVHISRSSC*ISLLAW
Trigger: CCAGGCCAGCAAGGAGATCAAGCAACTGCTTCGAGA...TATGTGAACTCGGGCATGAGTGCAAAGGCGTGCATGCCAGCCTAGGGGCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCTGTTACAGTAATCCTTaGTTGCCCGGACCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGCYSNP*LPGPAE
Trigger: CTCTGCAGGTCCGGGCAACAAAGGATTACTGTAACA...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACGTGGGTGGCAGGTGGTaGGAGGATTTCTCAACAGCA +
Preference number: 5 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHVGGRW*EDFSTA
Trigger: TGCTGTTGAGAAATCCTCCAACCACCTGCCACCCAC...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp TCACACTGGGTGCACCCTCACACCAGCACCCCAAGGGCATGGCCACACCCAGAATTTGACGTTCTCTTGTaGGCTCTGCTTGGCCCGGAT +
Preference number: 5 (lower is better)
Translates to: SHWVHPHTSTPRAWPHPEFDVLL*ALLGPD
Trigger: ATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAA...TTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGTGAGGGTGCACCCAGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CTGTCCCTTGTGCTGTGCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTTTGACGTTCTCTTGTaGGCTCTGCTTGGCCCGGAT +
Preference number: 5 (lower is better)
Translates to: LSLVLCQSGWQRFPNGQFFDVLL*ALLGPD
Trigger: ATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAA...GAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGCACAGCACAAGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp TTCTTGGAGGCAGGTGTAGGTGAGCCCTGGATCTTGGACACAGGCTaGGACAGAATGGGCTTGGGAGAGACGGGTGGCTTCACAGGCTTC +
Preference number: 5 (lower is better)
Translates to: FLEAGVGEPWILDTG*DRMGLGETGGFTGF
Trigger: GAAGCCTGTGAAGCCACCCGTCTCTCCCAAGCCCATTCTGTCTCAGCCTGTGTCCAAGATCCAGGGCTCACCTACACCTGCCTCCAAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GGCTTGACCGGGCTATCTCCTGGGCTGGACTCAGAGACTGACTTCTaGGAAAGCACGGTTGCCAGGAGCTTAACTCCTTCAGAGCCTGCA +
Preference number: 5 (lower is better)
Translates to: GLTGLSPGLDSETDF*ESTVARSLTPSEPA
Trigger: TGCAGGCTCTGAAGGAGTTAAGCTCCTGGCAACCGTGCTTTCCCAGAAGTCAGTCTCTGAGTCCAGCCCAGGAGATAGCCCGGTCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp TCAGGGATGTTCAGGCCGCTGATCTCTGCCGTAATCTTCTTACGGTaGCCTGGCTTGGTAACGCCAATGGCTGTGAGGTCCTCAGGGGTC +
Preference number: 5 (lower is better)
Translates to: SGMFRPLISAVIFLR*PGLVTPMAVRSSGV
Trigger: GACCCCTGAGGACCTCACAGCCATTGGCGTTACCAAGCCAGGCCACCGTAAGAAGATTACGGCAGAGATCAGCGGCCTGAACATCCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS CCA 90 bp CAGGTGGTTGGAGGATTTCTCAACAGCAGCTGCACCTGCTTCAGCTaGGCCAGACAGGGCAGCTTGCAGCTCTCCACTGAGTTCACTGTC +
Preference number: 5 (lower is better)
Translates to: QVVGGFLNSSCTCFS*ARQGSLQLSTEFTV
Trigger: GACAGTGAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGCCCAGCTGAAGCAGGTGCAGCTGCTGTTGAGAAATCCTCCAACCACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCACAGGGAGCAGCAGACAGGAATGGGCACCAGCGGGCAGCGCATCTGCTCAGACTGGGACGTTGTAAATaGGTGTACAATGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: AQGAADRNGHQRAAHLLRLGRCK*VYNVQC
Trigger: GCACTGGACATTGTACACCAATTTACAACGTCCCAG...TCTGAGCAGATGCGCTGCCCGCTGGTGCCCATTCCTGTCTGCTGCTCCCTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCATGGAAGGTGGTCATCTaGGGAGACTGGCACTCTGCT +
Preference number: 5 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSWKVVI*GDWHSA
Trigger: AGCAGAGTGCCAGTCTCCCAAGATGACCACCTTCCA...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACGAATTTGACGTTCTCTaGTTGGCTCTGCTTGGCCCG +
Preference number: 5 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHEFDVL*LALLGP
Trigger: CGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTC...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp GTGTCAGACTCTGTCAGGATGAATTTGACGTTCTCTTGTTGGCTCTaGTTGGCCCGGATGCGCCTCTTGAGCGTGGCACTGGCCTCTACC +
Preference number: 5 (lower is better)
Translates to: VSDSVRMNLTFSCWL*LARMRLLSVALAST
Trigger: GGTAGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp GATGTTCAGGCCGCTGATCTCTGCCGTAATCTTCTTACGGTGGCCTaGCTTGGTAACGCCAATGGCTGTGAGGTCCTCAGGGGTCATACG +
Preference number: 5 (lower is better)
Translates to: DVQAADLCRNLLTVA*LGNANGCEVLRGHT
Trigger: CGTATGACCCCTGAGGACCTCACAGCCATTGGCGTTACCAAGCCAGGCCACCGTAAGAAGATTACGGCAGAGATCAGCGGCCTGAACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS CCA 90 bp TCTCCACTGAGTTCACTGTCCTGGAAGGTGGTCATCTTGGGAGACTaGCACTCTGCTGCAGCAGGCTCAGATGGGGGCGGTGACTCAATA +
Preference number: 5 (lower is better)
Translates to: SPLSSLSWKVVILGD*HSAAAGSDGGGDSI
Trigger: TATTGAGTCACCGCCCCCATCTGAGCCTGCTGCAGCAGAGTGCCAGTCTCCCAAGATGACCACCTTCCAGGACAGTGAACTCAGTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGCCCATTGACATTGATCTTCTaGGTAGAGCCCAGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: EGARPEVKVKVRGVRVGPLTLIF*VEPRSL
Trigger: CAAGCTCCTGGGCTCTACCAAGAAGATCAATGTCAA...TGGGCCCACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCACATCCTTCATTTTGGTGTCCCAGCTaGGTGATACCGATCTCCTGC +
Preference number: 5 (lower is better)
Translates to: PQPCVAWRRASKSKAHPSFWCPS*VIPISC
Trigger: GCAGGAGATCGGTATCACCAAGCTGGGACACCAAAA...TGAAGGATGTGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGGGAGTATTCTGCCTTTaGCAGCTCTGCCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVGVFCL*QLCQFP
Trigger: AGGAAACTGGCAGAGCTGCAAAAGGCAGAATACTCC...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp GCCAGAGCGGCTGGCAGAGGTTCCCCAATGGGCAGTTCTGTGCTGGGCATAGGCTCTGTCAGGATGAATTaGACGTTCTCTTGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: ARAAGRGSPMGSSVLGIGSVRMN*TFSCWL
Trigger: GAGCCAACAAGAGAACGTCAAATTCATCCTGACAGA...GCCTATGCCCAGCACAGAACTGCCCATTGGGGAACCTCTGCCAGCCGCTCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp ACACCAGCACCCCAAGGGCATGGCCACACCCAGAAGGAAGAAGCCCTCCCCAGCTCTGTCAGGATGAATTaGACGTTCTCTTGTTGGCTC +
Preference number: 5 (lower is better)
Translates to: TPAPQGHGHTQKEEALPSSVRMN*TFSCWL
Trigger: GAGCCAACAAGAGAACGTCAAATTCATCCTGACAGA...GCTGGGGAGGGCTTCTTCCTTCTGGGTGTGGCCATGCCCTTGGGGTGCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp TTTGTGTTCAGGCAGCCAGTCAGGGATGTTCAGGCCGCTGATCTCTaGCGTAATCTTCTTACGGTGGCCTGGCTTGGTAACGCCAATGGC +
Preference number: 5 (lower is better)
Translates to: FVFRQPVRDVQAADL*RNLLTVAWLGNANG
Trigger: GCCATTGGCGTTACCAAGCCAGGCCACCGTAAGAAGATTACGGCAGAGATCAGCGGCCTGAACATCCCTGACTGGCTGCCTGAACACAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS CCA 90 bp GCCGCTGAGGCCTCTCGAAGCAGTTGCTTGATCTCCTTGCTGGCCTaGGACGTTGTAAATTGGTGTACAATGTCCAGTGCTGTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AAEASRSSCLISLLA*DVVNWCTMSSAVWL
Trigger: CAGCCAGACAGCACTGGACATTGTACACCAATTTACAACGTCCCAGGCCAGCAAGGAGATCAAGCAACTGCTTCGAGAGGCCTCAGCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp CACTGTCGGATGCTGCATAGCGATTCAAGCTGTGGGCACGTTTCTTaGGCCTCCCAGGCTCTACATCAGTTTCTGGGGGCAAGCATAGAG +
Preference number: 5 (lower is better)
Translates to: HCRMLHSDSSCGHVS*ASQALHQFLGASIE
Trigger: CTCTATGCTTGCCCCCAGAAACTGATGTAGAGCCTGGGAGGCCCAAGAAACGTGCCCACAGCTTGAATCGCTATGCAGCATCCGACAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp TTCACTGTGTCAGACTCTGTCAGGATGAATTTGACGTTCTCTTGTTaGCTCTGCTTGGCCCGGATGCGCCTCTTGAGCGTGGCACTGGCC +
Preference number: 5 (lower is better)
Translates to: FTVSDSVRMNLTFSC*LCLARMRLLSVALA
Trigger: GGCCAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGACACAGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AGAAGCCCTCCCCAGCCCTGTGTGGCATGGAGGAGAGCCAGTAAGAGCAAGGCATTGACATTGATCTTCTaGGTAGAGCCCAGGAGCTTG +
Preference number: 5 (lower is better)
Translates to: RSPPQPCVAWRRASKSKALTLIF*VEPRSL
Trigger: CAAGCTCCTGGGCTCTACCAAGAAGATCAATGTCAA...TGCCTTGCTCTTACTGGCTCTCCTCCATGCCACACAGGGCTGGGGAGGGCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CCGCTTGAAGGTGCCCGTCCTGAGGTAAAGGTCAAAGTGCGGGGAGTACGGGTGAACGGCCGCATACCTTaGTTGTCCTTGATGTCTACA +
Preference number: 5 (lower is better)
Translates to: PLEGARPEVKVKVRGVRVNGRIP*LSLMST
Trigger: TGTAGACATCAAGGACAACAAAGGTATGCGGCCGTT...CACCCGTACTCCCCGCACTTTGACCTTTACCTCAGGACGGGCACCTTCAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp CTGGGCATAGGCCTGTGCTCTGCCACAGATTGGAAAGAGGGCCACAGTGGCCACCTGGGACGTTGTAAATaGGTGTACAATGTCCAGTGC +
Preference number: 5 (lower is better)
Translates to: LGIGLCSATDWKEGHSGHLGRCK*VYNVQC
Trigger: GCACTGGACATTGTACACCAATTTACAACGTCCCAG...GTGGCCACTGTGGCCCTCTTTCCAATCTGTGGCAGAGCACAGGCCTATGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCTCTTGTTGGCTCTGCTaGGCCCGGATGCGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGSCWLC*ARMRLL
Trigger: CAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGA...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGAGTCCCGCCAAAGCCTaGGCTGGCTTGGGTGCTGTA +
Preference number: 5 (lower is better)
Translates to: SVMPDTCGSANTREESSQSPAKA*AGLGAV
Trigger: TACAGCACCCAAGCCAGCCAAGGCTTTGGCGGGACT...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 90 bp AGCAGCAGAGAGATCAATTCTGTGTTGCCATTCAGGGCGGCATGGTaGAGGGCTGAGAAGCCATCCGGGTCCTGGAAGTTGACATTGATC +
Preference number: 5 (lower is better)
Translates to: SSREINSVLPFRAAW*RAEKPSGSWKLTLI
Trigger: GATCAATGTCAACTTCCAGGACCCGGATGGCTTCTCAGCCCTGCACCATGCCGCCCTGAATGGCAACACAGAATTGATCTCTCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCGGCCCAATGGCCTCTTaGTGCTTCACAGAGGCCAAC +
Preference number: 5 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGGPMAS*CFTEAN
Trigger: GTTGGCCTCTGTGAAGCACAAAGAGGCCATTGGGCC...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AGTGTTATGCCCGACACTTGTGGATCAGCAAACACGAGAGAGGAGAGCAGTCAGGTGGGTGGCAGGTGGTaGGAGGATTTCTCAACAGCA +
Preference number: 5 (lower is better)
Translates to: SVMPDTCGSANTREESSQVGGRW*EDFSTA
Trigger: TGCTGTTGAGAAATCCTCCAACCACCTGCCACCCAC...CTGACTGCTCTCCTCTCTCGTGTTTGCTGATCCACAAGTGTCGGGCATAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 90 bp CAATGTCCAGTGCTGTCTGGCTGTAGGTGTTCCTCACCTGGGCATTaGTCCCACTATCCAACAGTAGCCGAACCACTTCTGTTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: QCPVLSGCRCSSPGH*SHYPTVAEPLLFSH
Trigger: GTGGGAAAACAGAAGTGGTTCGGCTACTGTTGGATAGTGGGATCAATGCCCAGGTGAGGAACACCTACAGCCAGACAGCACTGGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCGGCCGCATACCTTTGTaGTCCTTGATGTCTACAGCA +
Preference number: 5 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGGRIPL*SLMSTA
Trigger: TGCTGTAGACATCAAGGACAACAAAGGTATGCGGCC...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS-3UTR CAA 90 bp AATACTCTTGATAGCTTATATTCTGGGGTGCAGTGGGGCGAGCCCAACCTTGGCTGTTACAGTAATCCTTaGTTGCCCGGACCTGCAGAG +
Preference number: 5 (lower is better)
Translates to: NTLDSLYSGVQWGEPNLGCYSNP*LPGPAE
Trigger: CTCTGCAGGTCCGGGCAACAAAGGATTACTGTAACA...GCCAAGGTTGGGCTCGCCCCACTGCACCCCAGAATATAAGCTATCAAGAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 90 bp ATTGCCTGTCCGGTTGTCATGAATACAGCCTTTCCACCGGCCATCTaGATGCTGTTCAAGTACCGTGATAATGTCCCCAGCCTTCACATT +
Preference number: 5 (lower is better)
Translates to: IACPVVMNTAFPPAI*MLFKYRDNVPSLHI
Trigger: AATGTGAAGGCTGGGGACATTATCACGGTACTTGAACAGCATCCAGATGGCCGGTGGAAAGGCTGTATTCATGACAACCGGACAGGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CCGGGCACCGGGGGCACACTGGCCCTCTTGACGCTGTaGCCATGGCGGCTGGACCGCACCTCCTTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: PGTGGTLALLTL*PWRLDRTSLGG
Trigger: CCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp CGTGGCTTGCCGGGCACCGGGGGCACACTGGCCCTCTaGACGCTGTGGCCATGGCGGCTGGACCGCACCTCC +
Preference number: 6 (lower is better)
Translates to: RGLPGTGGTLAL*TLWPWRLDRTS
Trigger: GGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp GTGGCTTGCCGGGCACCGGGGGCACACTGGCCCTCTTaGCGCTGTGGCCATGGCGGCTGGACCGCACCTCCT +
Preference number: 6 (lower is better)
Translates to: VACRAPGAHWPS*RCGHGGWTAPP
Trigger: AGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp AGGACCTGTCGTGGCTTGCCGGGCACCGGGGGCACACTGGCCCTCTaGACGCTGTGGCCATGGCGGCTGGACCGCACCTCCTTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: RTCRGLPGTGGTLAL*TLWPWRLDRTSLGG
Trigger: CCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCACGACAGGTCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp GGCTTGGCGGGTACGTGCAGCGCGGGTGTCCCTGGGGAAGGGGGCTaGACAGGGCTGGCGCTCTGCGAGGGCGGCGAACTAGCTGGCTTG +
Preference number: 6 (lower is better)
Translates to: GLAGTCSAGVPGEGG*TGLALCEGGELAGL
Trigger: CAAGCCAGCTAGTTCGCCGCCCTCGCAGAGCGCCAGCCCTGTCAAGCCCCCTTCCCCAGGGACACCCGCGCTGCACGTACCCGCCAAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp GGCGAACTAGCTGGCTTGATGAGCGCTGCTGGCGGCTaGCGCGCTGGAGAGGGCACAGGCGAGGGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: GELAGLMSAAGG*RAGEGTGEGVA
Trigger: CGCCACCCCCTCGCCTGTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCTCATCAAGCCAGCTAGTTCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp TCCACACTGCCGGCGAGATCACTAGCCCGACGGCGTTaGGCCCGGACCCCTAGCCGGCCGTCCTCTGCCTCA +
Preference number: 6 (lower is better)
Translates to: STLPARSLARRR*ARTPSRPSSAS
Trigger: TGAGGCAGAGGACGGCCGGCTAGGGGTCCGGGCGCAACGCCGTCGGGCTAGTGATCTCGCCGGCAGTGTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp ACCGGGGGCACACTGGCCCTCTTGACGCTGTGGCCATaGCGGCTGGACCGCACCTCCTTGGGTGGGGTGCCA +
Preference number: 6 (lower is better)
Translates to: TGGTLALLTLWP*RLDRTSLGGVP
Trigger: TGGCACCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp TGCGGGTACTGGTGGGGGCGCAGGTCCGGGAGCAGGTaGCCCTACCTCGCCCTCAACTGGCTGAGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: CGYWWGRRSGSR*PYLALNWLRQH
Trigger: GTGCTGCCTCAGCCAGTTGAGGGCGAGGTAGGGCCACCTGCTCCCGGACCTGCGCCCCCACCAGTACCCGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GCGGCTGACGCGCTGGAGAGGGCACAGGCGAGGGGGTaGCGCTGCTGGACTGTAGTCCCGCCAAAGCCTTGG +
Preference number: 6 (lower is better)
Translates to: AADALERAQARG*RCWTVVPPKPW
Trigger: CCAAGGCTTTGGCGGGACTACAGTCCAGCAGCGCCACCCCCTCGCCTGTGCCCTCTCCAGCGCGTCAGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp AGCTGGCTTGATGAGCGCTGCTGGCGGCTGACGCGCTaGAGAGGGCACAGGCGAGGGGGTGGCGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: SWLDERCWRLTR*RGHRRGGGAAG
Trigger: TCCAGCAGCGCCACCCCCTCGCCTGTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCTCATCAAGCCAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GACAGGGCTGGCGCTCTGCGAGGGCGGCGAACTAGCTaGCTTGATGAGCGCTGCTGGCGGCTGACGCGCTGG +
Preference number: 6 (lower is better)
Translates to: DRAGALRGRRTS*LDERCWRLTRW
Trigger: CCAGCGCGTCAGCCGCCAGCAGCGCTCATCAAGCCAGCTAGTTCGCCGCCCTCGCAGAGCGCCAGCCCTGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GTCCGGAGACCACTGAAGCAGCAGCGCGAGGGGGCTTaGCGGGTACGTGCAGCGCGGGTGTCCCTGGGGAAG +
Preference number: 6 (lower is better)
Translates to: VRRPLKQQREGA*RVRAARVSLGK
Trigger: CTTCCCCAGGGACACCCGCGCTGCACGTACCCGCCAAGCCCCCTCGCGCTGCTGCTTCAGTGGTCTCCGGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp GGTCCGGAGACCACTGAAGCAGCAGCGCGAGGGGGCTaGGCGGGTACGTGCAGCGCGGGTGTCCCTGGGGAA +
Preference number: 6 (lower is better)
Translates to: GPETTEAAARGG*AGTCSAGVPGE
Trigger: TTCCCCAGGGACACCCGCGCTGCACGTACCCGCCAAGCCCCCTCGCGCTGCTGCTTCAGTGGTCTCCGGACC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp GGGGGTGTGAAGTGGCTGGCACCAGACGGAAGGACCTGTCGTGGCTaGCCGGGCACCGGGGGCACACTGGCCCTCTTGACGCTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: GGVKWLAPDGRTCRG*PGTGGTLALLTLWP
Trigger: TGGCCACAGCGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCACGACAGGTCCTTCCGTCTGGTGCCAGCCACTTCACACCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp GGGGTGGCGCTGCTGGACTGTAGTCCCGCCAAAGCCTTGGCTGGCTaGGGTGCTGTAGGTGGCGGAGGCGGCTTGGGTGACACGGGCGGT +
Preference number: 6 (lower is better)
Translates to: GVALLDCSPAKALAG*GAVGGGGGLGDTGG
Trigger: ACCGCCCGTGTCACCCAAGCCGCCTCCGCCACCTACAGCACCCAAGCCAGCCAAGGCTTTGGCGGGACTACAGTCCAGCAGCGCCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp CTGCGAGGGCGGCGAACTAGCTGGCTTGATGAGCGCTaGTGGCGGCTGACGCGCTGGAGAGGGCACAGGCGA +
Preference number: 6 (lower is better)
Translates to: LRGRRTSWLDER*WRLTRWRGHRR
Trigger: TCGCCTGTGCCCTCTCCAGCGCGTCAGCCGCCAGCAGCGCTCATCAAGCCAGCTAGTTCGCCGCCCTCGCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CTGGAGCCGGCTCGTCGGCTAGGTTGGCACTGGCCATaGCCGAGCTGGAGCGTTTGGGTGGAGGTGGTGGGG +
Preference number: 6 (lower is better)
Translates to: LEPARRLGWHWP*PSWSVWVEVVG
Trigger: CCCCACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCGACGAGCCGGCTCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GCGCTGGAGAGGGCACAGGCGAGGGGGTGGCGCTGCTaGACTGTAGTCCCGCCAAAGCCTTGGCTGGCTTGG +
Preference number: 6 (lower is better)
Translates to: ALERAQARGWRC*TVVPPKPWLAW
Trigger: CCAAGCCAGCCAAGGCTTTGGCGGGACTACAGTCCAGCAGCGCCACCCCCTCGCCTGTGCCCTCTCCAGCGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp CGGCCGTCCTCTGCCTCAACGTCTGGAGCCGGCTCGTCGGCTAGGTaGGCACTGGCCATGGCCGAGCTGGAGCGTTTGGGTGGAGGTGGT +
Preference number: 6 (lower is better)
Translates to: RPSSASTSGAGSSAR*ALAMAELERLGGGG
Trigger: ACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCGACGAGCCGGCTCCAGACGTTGAGGCAGAGGACGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp ACAGGCGAGGGGGTGGCGCTGCTGGACTGTAGTCCCGCCAAAGCCTaGGCTGGCTTGGGTGCTGTAGGTGGCGGAGGCGGCTTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: TGEGVALLDCSPAKA*AGLGAVGGGGGLGD
Trigger: GTCACCCAAGCCGCCTCCGCCACCTACAGCACCCAAGCCAGCCAAGGCTTTGGCGGGACTACAGTCCAGCAGCGCCACCCCCTCGCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp AGCATGGGCTGCTGGAGGCTGGGACCGGGCCGCACCTaGAGAGCCCTCTGGAGGCTTGACCGGGCTATCTCC +
Preference number: 6 (lower is better)
Translates to: SMGCWRLGPGRT*RALWRLDRAIS
Trigger: GGAGATAGCCCGGTCAAGCCTCCAGAGGGCTCTTCAGGTGCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp GTCCCTGGGGAAGGGGGCTTGACAGGGCTGGCGCTCTaGGAGGGCGGCGAACTAGCTGGCTTGATGAGCGCT +
Preference number: 6 (lower is better)
Translates to: VPGEGGLTGLAL*EGGELAGLMSA
Trigger: AGCGCTCATCAAGCCAGCTAGTTCGCCGCCCTCGCAGAGCGCCAGCCCTGTCAAGCCCCCTTCCCCAGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp TCCCCATATACCTGCCCAGCATGGGCTGCTGGAGGCTaGGACCGGGCCGCACCTGAAGAGCCCTCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: SPYTCPAWAAGG*DRAAPEEPSGG
Trigger: GCCTCCAGAGGGCTCTTCAGGTGCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATATGGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GCTGTGGCCATGGCGGCTGGACCGCACCTCCTTGGGTaGGGTGCCAGGAGCCATCCCCTCATCCAGCAGGTA +
Preference number: 6 (lower is better)
Translates to: AVAMAAGPHLLG*GARSHPLIQQV
Trigger: TACCTGCTGGATGAGGGGATGGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GTTGGCACTGGCCATGGCCGAGCTGGAGCGTTTGGGTaGAGGTGGTGGGGGCCCCTTCTTACGTGGCCGCAC +
Preference number: 6 (lower is better)
Translates to: VGTGHGRAGAFG*RWWGPLLTWPH
Trigger: GTGCGGCCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp TTGACGCTGTGGCCATGGCGGCTGGACCGCACCTCCTaGGGTGGGGTGCCAGGAGCCATCCCCTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: LTLWPWRLDRTS*GGVPGAIPSSS
Trigger: GCTGGATGAGGGGATGGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp AAGTGGCTGGCACCAGACGGAAGGACCTGTCGTGGCTaGCCGGGCACCGGGGGCACACTGGCCCTCTTGACG +
Preference number: 6 (lower is better)
Translates to: KWLAPDGRTCRG*PGTGGTLALLT
Trigger: CGTCAAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCACGACAGGTCCTTCCGTCTGGTGCCAGCCACTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp CTGGCCCTCTTGACGCTGTGGCCATGGCGGCTGGACCGCACCTCCTaGGGTGGGGTGCCAGGAGCCATCCCCTCATCCAGCAGGTATTCC +
Preference number: 6 (lower is better)
Translates to: LALLTLWPWRLDRTS*GGVPGAIPSSSRYS
Trigger: GGAATACCTGCTGGATGAGGGGATGGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCCACAGCGTCAAGAGGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp GACCGCCTCAGCACTCTTGCCCTCAGAGGCCGAGGCTaGGGCCGATTCCAGCTTCTTCGGTGGCTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: DRLSTLALRGRG*GRFQLLRWLLP
Trigger: GGGGAGCAGCCACCGAAGAAGCTGGAATCGGCCTCAGCCTCGGCCTCTGAGGGCAAGAGTGCTGAGGCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS TCA 72 bp TGGCTTGGGTGCTGTAGGTGGCGGAGGCGGCTTGGGTaGCACGGGCGGTGGCGTGCCATGAGCACGCTTTAC +
Preference number: 6 (lower is better)
Translates to: WLGCCRWRRRLG*HGRWRAMSTLY
Trigger: GTAAAGCGTGCTCATGGCACGCCACCGCCCGTGTCACCCAAGCCGCCTCCGCCACCTACAGCACCCAAGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp GGCCATGGCGGCTGGACCGCACCTCCTTGGGTGGGGTaGCAGGAGCCATCCCCTCATCCAGCAGGTATTCCT +
Preference number: 6 (lower is better)
Translates to: GHGGWTAPPWVG*QEPSPHPAGIP
Trigger: AGGAATACCTGCTGGATGAGGGGATGGCTCCTGGCACCCCACCCAAGGAGGTGCGGTCCAGCCGCCATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp TGTGAAGTGGCTGGCACCAGACGGAAGGACCTGTCGTaGCTTGCCGGGCACCGGGGGCACACTGGCCCTCTT +
Preference number: 6 (lower is better)
Translates to: CEVAGTRRKDLS*LAGHRGHTGPL
Trigger: AAGAGGGCCAGTGTGCCCCCGGTGCCCGGCAAGCCACGACAGGTCCTTCCGTCTGGTGCCAGCCACTTCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GTGGTAGCAGCTGTGGGGTGGGCTTCACCTTGGCTGTaGCTGGACCATGAGGTCCCCCAAGGGCCTGAGGGG +
Preference number: 6 (lower is better)
Translates to: VVAAVGWASPWL*LDHEVPQGPEG
Trigger: CCCCTCAGGCCCTTGGGGGACCTCATGGTCCAGCCACAGCCAAGGTGAAGCCCACCCCACAGCTGCTACCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GGCCATGGCCGAGCTGGAGCGTTTGGGTGGAGGTGGTaGGGGCCCCTTCTTACGTGGCCGCACAGCAAAGGA +
Preference number: 6 (lower is better)
Translates to: GHGRAGAFGWRW*GPLLTWPHSKG
Trigger: TCCTTTGCTGTGCGGCCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CTAGGTTGGCACTGGCCATGGCCGAGCTGGAGCGTTTaGGTGGAGGTGGTGGGGGCCCCTTCTTACGTGGCC +
Preference number: 6 (lower is better)
Translates to: LGWHWPWPSWSV*VEVVGAPSYVA
Trigger: GGCCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CTGCCTCAACGTCTGGAGCCGGCTCGTCGGCTAGGTTaGCACTGGCCATGGCCGAGCTGGAGCGTTTGGGTG +
Preference number: 6 (lower is better)
Translates to: LPQRLEPARRLG*HWPWPSWSVWV
Trigger: CACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCGACGAGCCGGCTCCAGACGTTGAGGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CACAGGCTTCCGTGCATTGCCATCAGGCAGGGGCAGTaGAGGCAGCTGCATCAGGTCAGCGGGTGGGGGCTC +
Preference number: 6 (lower is better)
Translates to: HRLPCIAIRQGQ*RQLHQVSGWGL
Trigger: GAGCCCCCACCCGCTGACCTGATGCAGCTGCCTCCACTGCCCCTGCCTGATGGCAATGCACGGAAGCCTGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp TCTCTTGTTGGCTCTGCTTGGCCCGGATGCGCCTCTTaGGCGTGGCACTGGCCTCTACCCGGGCAAGGGGAG +
Preference number: 6 (lower is better)
Translates to: SLVGSAWPGCAS*AWHWPLPGQGE
Trigger: CTCCCCTTGCCCGGGTAGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp CACAGCCAGGTTAGCCTTGCCCTCAGAGGCCGAGGCTaGGGCCGATTCCAGCTTCTTCGGTGGCTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: HSQVSLALRGRG*GRFQLLRWLLP
Trigger: GGGGAGCAGCCACCGAAGAAGCTGGAATCGGCCTCAGCCTCGGCCTCTGAGGGCAAGGCTAACCTGGCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234717.2
CDS GCA 72 bp GATTCCAGCTTCTTCGGTGGCTGCTCCCCATATACCTaGCCAGCATGGGCTGCTGGAGGCTGGGACCGGGCC +
Preference number: 6 (lower is better)
Translates to: DSSFFGGCSPYT*PAWAAGGWDRA
Trigger: GGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCAGCCACCGAAGAAGCTGGAATC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp GCCCTGGAGGCCCATCGCCCAACAGCTCCTGAGAGCTaGTTATGTGCCGAGCCCGTCCACTCAGGCTGGACT +
Preference number: 6 (lower is better)
Translates to: ALEAHRPTAPES*LCAEPVHSGWT
Trigger: AGTCCAGCCTGAGTGGACGGGCTCGGCACATAAGCAGCTCTCAGGAGCTGTTGGGCGATGGGCCTCCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp TTCTTCGGTGGCTGCTCCCCATATACCTGCCCAGCATaGGCTGCTGGAGGCTGGGACCGGGCCGCACCTGAA +
Preference number: 6 (lower is better)
Translates to: FFGGCSPYTCPA*AAGGWDRAAPE
Trigger: TTCAGGTGCGGCCCGGTCCCAGCCTCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCAGCCACCGAAGAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp TCACTGAATGGCTCCGACCCACACGCCTCTGGACTGTaGCATAGGGTCCAGCGGCAGCCGGCACCAGCAGCT +
Preference number: 6 (lower is better)
Translates to: SLNGSDPHASGL*HRVQRQPAPAA
Trigger: AGCTGCTGGTGCCGGCTGCCGCTGGACCCTATGCCACAGTCCAGAGGCGTGTGGGTCGGAGCCATTCAGTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp AGACCCCCGGCGAGCAGTGGCCAAAAGCCCAGTGACTaGGCCACTGAGTGTACGGCGCCGGTTCACCACTTC +
Preference number: 6 (lower is better)
Translates to: RPPASSGQKPSD*ATECTAPVHHF
Trigger: GAAGTGGTGAACCGGCGCCGTACACTCAGTGGCCCAGTCACTGGGCTTTTGGCCACTGCTCGCCGGGGGTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp TGGGACCGGGCCGCACCTGAAGAGCCCTCTGGAGGCTaGACCGGGCTATCTCCTGGGCTGGACTCAGAGACT +
Preference number: 6 (lower is better)
Translates to: WDRAAPEEPSGG*TGLSPGLDSET
Trigger: AGTCTCTGAGTCCAGCCCAGGAGATAGCCCGGTCAAGCCTCCAGAGGGCTCTTCAGGTGCGGCCCGGTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp GCCGAGCCCGTCCACTCAGGCTGGACTCCCGAGAGGTaGTCCTCGGAGTGGGTGGCAGGTGGTTGGAGGATT +
Preference number: 6 (lower is better)
Translates to: AEPVHSGWTPER*SSEWVAGGWRI
Trigger: AATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCCTGAGTGGACGGGCTCGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp TCTGCCTCAACGTCTGGAGCCGGCTCGTCGGCTAGGTaGGCACTGGCCATGGCCGAGCTGGAGCGTTTGGGT +
Preference number: 6 (lower is better)
Translates to: SASTSGAGSSAR*ALAMAELERLG
Trigger: ACCCAAACGCTCCAGCTCGGCCATGGCCAGTGCCAACCTAGCCGACGAGCCGGCTCCAGACGTTGAGGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp CTGCTGGACTGTAGTCCCGCCAAAGCCTTGGCTGGCTaGGGTGCTGTAGGTGGCGGAGGCGGCTTGGGTGAC +
Preference number: 6 (lower is better)
Translates to: LLDCSPAKALAG*GAVGGGGGLGD
Trigger: GTCACCCAAGCCGCCTCCGCCACCTACAGCACCCAAGCCAGCCAAGGCTTTGGCGGGACTACAGTCCAGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp AGCCTGGCTGAGCTTTGGTGGGCGTCTGTGGGGGTGTaGAGTGGCTGGCACCAGACGGAAGGACCTGTCGTG +
Preference number: 6 (lower is better)
Translates to: SLAELWWASVGV*SGWHQTEGPVV
Trigger: CACGACAGGTCCTTCCGTCTGGTGCCAGCCACTTCACACCCCCACAGACGCCCACCAAAGCTCAGCCAGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp CTGGGGTGGGCTTGGCTCACTGCCTGTCCGGGAACCTaGTCGCTTGACAATAGCCTCCCCCAGGGAAGATGG +
Preference number: 6 (lower is better)
Translates to: LGWAWLTACPGT*SLDNSLPQGRW
Trigger: CCATCTTCCCTGGGGGAGGCTATTGTCAAGCGAGCAGGTTCCCGGACAGGCAGTGAGCCAAGCCCACCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp GCCGAGGCTGAGGCCGATTCCAGCTTCTTCGGTGGCTaGTCCCCATATACCTGCCCAGCATGGGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: AEAEADSSFFGG*SPYTCPAWAAG
Trigger: TCCAGCAGCCCATGCTGGGCAGGTATATGGGGAGCAGCCACCGAAGAAGCTGGAATCGGCCTCAGCCTCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GGTGTGTGGGTGACTGAGGCAAGGAACGGGGTGACATaGGCCGGTCTGTTGGTGGTAGCAGCTGTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: GVWVTEARNGVT*AGLLVVAAVGW
Trigger: CCACCCCACAGCTGCTACCACCAACAGACCGGCCCATGTCACCCCGTTCCTTGCCTCAGTCACCCACACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp AGGTCCGGGAGCAGGTGGCCCTACCTCGCCCTCAACTaGCTGAGGCAGCACATAGGCAAAGCCACGGTGTGT +
Preference number: 6 (lower is better)
Translates to: RSGSRWPYLALN*LRQHIGKATVC
Trigger: ACACACCGTGGCTTTGCCTATGTGCTGCCTCAGCCAGTTGAGGGCGAGGTAGGGCCACCTGCTCCCGGACCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp AAGGGGAGGACCCTCCGCACTTGCCTCACCCTTAGCTaGACCTCGAAGCCGTTGTCGGGCTGTGCCATCCTC +
Preference number: 6 (lower is better)
Translates to: KGRTLRTCLTLS*TSKPLSGCAIL
Trigger: GAGGATGGCACAGCCCGACAACGGCTTCGAGGTCCAGCTAAGGGTGAGGCAAGTGCGGAGGGTCCTCCCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp TTCTCTTGTTGGCTCTGCTTGGCCCGGATGCGCCTCTaGAGCGTGGCACTGGCCTCTACCCGGGCAAGGGGA +
Preference number: 6 (lower is better)
Translates to: FSCWLCLARMRL*SVALASTRARG
Trigger: TCCCCTTGCCCGGGTAGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp GTGTGGGTGACTGAGGCAAGGAACGGGGTGACATGGGCCGGTCTGTaGGTGGTAGCAGCTGTGGGGTGGGCTTCACCTTGGCTGTGGCTG +
Preference number: 6 (lower is better)
Translates to: VWVTEARNGVTWAGL*VVAAVGWASPWLWL
Trigger: CAGCCACAGCCAAGGTGAAGCCCACCCCACAGCTGCTACCACCAACAGACCGGCCCATGTCACCCCGTTCCTTGCCTCAGTCACCCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp AATTTGACGTTCTCTTGTTGGCTCTGCTTGGCCCGGATGCGCCTCTaGAGCGTGGCACTGGCCTCTACCCGGGCAAGGGGAGGACCCTCC +
Preference number: 6 (lower is better)
Translates to: NLTFSCWLCLARMRL*SVALASTRARGGPS
Trigger: GGAGGGTCCTCCCCTTGCCCGGGTAGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp TGGGAGAGACGGGTGGCTTCACAGGCTTCCGTGCATTaGCATCAGGCAGGGGCAGTGGAGGCAGCTGCATCA +
Preference number: 6 (lower is better)
Translates to: WERRVASQASVH*HQAGAVEAAAS
Trigger: TGATGCAGCTGCCTCCACTGCCCCTGCCTGATGGCAATGCACGGAAGCCTGTGAAGCCACCCGTCTCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp ACATGGGCCGGTCTGTTGGTGGTAGCAGCTGTGGGGTaGGCTTCACCTTGGCTGTGGCTGGACCATGAGGTC +
Preference number: 6 (lower is better)
Translates to: TWAGLLVVAAVG*ASPWLWLDHEV
Trigger: GACCTCATGGTCCAGCCACAGCCAAGGTGAAGCCCACCCCACAGCTGCTACCACCAACAGACCGGCCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CTGGCTGAGGCAGCACATAGGCAAAGCCACGGTGTGTaGGTGACTGAGGCAAGGAACGGGGTGACATGGGCC +
Preference number: 6 (lower is better)
Translates to: LAEAAHRQSHGV*VTEARNGVTWA
Trigger: GGCCCATGTCACCCCGTTCCTTGCCTCAGTCACCCACACACCGTGGCTTTGCCTATGTGCTGCCTCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp AGGCTGGACTCCCGAGAGGTTGTCCTCGGAGTGGGTGGCAGGTGGTaGGAGGATTTCTCAACAGCAGCTGCACCTGCTTCAGCTGGGCCA +
Preference number: 6 (lower is better)
Translates to: RLDSREVVLGVGGRW*EDFSTAAAPASAGP
Trigger: TGGCCCAGCTGAAGCAGGTGCAGCTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp GTACGGCGCCGGTTCACCACTTCACCGTCAGGCCCAATGGCCTCTTaGTGCTTCACAGAGGCCAACACGGTAGCTACTCGGCCCGGTTCT +
Preference number: 6 (lower is better)
Translates to: VRRRFTTSPSGPMAS*CFTEANTVATRPGS
Trigger: AGAACCGGGCCGAGTAGCTACCGTGTTGGCCTCTGTGAAGCACAAAGAGGCCATTGGGCCTGACGGTGAAGTGGTGAACCGGCGCCGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp GTGCCAGGAGCCATCCCCTCATCCAGCAGGTATTCCTaGCTTCGTGACATAGGACTGCCAGGCCCTGGAGGC +
Preference number: 6 (lower is better)
Translates to: VPGAIPSSSRYS*LRDIGLPGPGG
Trigger: GCCTCCAGGGCCTGGCAGTCCTATGTCACGAAGTCAGGAATACCTGCTGGATGAGGGGATGGCTCCTGGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp GCTGCACCTGCTTCAGCTGGGCCAGACAGGGCAGCTTaGAGCTCTCCACTGAGTTCACTGTCCTGGAAGGTG +
Preference number: 6 (lower is better)
Translates to: AAPASAGPDRAA*SSPLSSLSWKV
Trigger: CACCTTCCAGGACAGTGAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGCCCAGCTGAAGCAGGTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp CCTGCTCTGAGGTTGGCCTTCGGCGAACGGTGGCTGTaGCATTCTGATACACAGACAGTGGTGGGGGTGGCT +
Preference number: 6 (lower is better)
Translates to: PALRLAFGERWL*HSDTQTVVGVA
Trigger: AGCCACCCCCACCACTGTCTGTGTATCAGAATGGCACAGCCACCGTTCGCCGAAGGCCAACCTCAGAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp CGAACATGCTGCCGATGTCTTCCAGGATGCTGCCAGTaGTCTTCTCCTCGATGGAGGAGGGGCGAGGGCCTT +
Preference number: 6 (lower is better)
Translates to: RTCCRCLPGCCQ*SSPRWRRGEGL
Trigger: AAGGCCCTCGCCCCTCCTCCATCGAGGAGAAGAGCACTGGCAGCATCCTGGAAGACATCGGCAGCATGTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp AGCAAGGCTGCACACATGTTGCTACTTAGCAGCAGCTaGACCACCCCTACGCGGCCGAACTCACAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SKAAHMLLLSSS*TTPTRPNSQAR
Trigger: CCTGGCCTGTGAGTTCGGCCGCGTAGGGGTGGTCCAGCTGCTGCTAAGTAGCAACATGTGTGCAGCCTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CAGGCTGGACTCCCGAGAGGTTGTCCTCGGAGTGGGTaGCAGGTGGTTGGAGGATTTCTCAACAGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: QAGLPRGCPRSG*QVVGGFLNSSC
Trigger: GCAGCTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CCCGCCCTCCACCCCCAATGGAAGACAGCTCCAACATaGCTGCGATGCTCTTCACACTGCCAGCACTACCTG +
Preference number: 6 (lower is better)
Translates to: PALHPQWKTAPT*LRCSSHCQHYL
Trigger: CAGGTAGTGCTGGCAGTGTGAAGAGCATCGCAGCCATGTTGGAGCTGTCTTCCATTGGGGGTGGAGGGCGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GCGAACGGTGGCTGTGCCATTCTGATACACAGACAGTaGTGGGGGTGGCTCAGGGCCAGTGTCAGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: ANGGCAILIHRQ*WGWLRASVRLL
Trigger: AAGGAGCCTGACACTGGCCCTGAGCCACCCCCACCACTGTCTGTGTATCAGAATGGCACAGCCACCGTTCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp TGTCTTCCAGGATGCTGCCAGTGCTCTTCTCCTCGATaGAGGAGGGGCGAGGGCCTTGTCCATCTTCCTGCC +
Preference number: 6 (lower is better)
Translates to: CLPGCCQCSSPR*RRGEGLVHLPA
Trigger: GGCAGGAAGATGGACAAGGCCCTCGCCCCTCCTCCATCGAGGAGAAGAGCACTGGCAGCATCCTGGAAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp TGCTTATGTGCCGAGCCCGTCCACTCAGGCTGGACTCCCGAGAGGTaGTCCTCGGAGTGGGTGGCAGGTGGTTGGAGGATTTCTCAACAG +
Preference number: 6 (lower is better)
Translates to: CLCAEPVHSGWTPER*SSEWVAGGWRISQQ
Trigger: CTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCCTGAGTGGACGGGCTCGGCACATAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp GATGCTGCCAGTGCTCTTCTCCTCGATGGAGGAGGGGCGAGGGCCTaGTCCATCTTCCTGCCTTATCTTCTCCTCCACTGCCTGCAGTGC +
Preference number: 6 (lower is better)
Translates to: DAASALLLDGGGARA*SIFLPYLLLHCLQC
Trigger: GCACTGCAGGCAGTGGAGGAGAAGATAAGGCAGGAAGATGGACAAGGCCCTCGCCCCTCCTCCATCGAGGAGAAGAGCACTGGCAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp CATAGAGCTGTAGCTGGAATGTGGCAAGCCACTGACTaGCCGCCTCAGCACTCTTGCCCTCAGAGGCCGAGG +
Preference number: 6 (lower is better)
Translates to: HRAVAGMWQATD*PPQHSCPQRPR
Trigger: CCTCGGCCTCTGAGGGCAAGAGTGCTGAGGCGGTCAGTCAGTGGCTTGCCACATTCCAGCTACAGCTCTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS TCA 72 bp CAGCTGGGCCAGACAGGGCAGCTTGCAGCTCTCCACTaGGTTCACTGTCCTGGAAGGTGGTCATCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: QLGQTGQLAALH*VHCPGRWSSWE
Trigger: CTCCCAAGATGACCACCTTCCAGGACAGTGAACTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGCCCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp GTTAACATTCTTGTCCGTGCCAGCAGGAGCCCTCACTaGATGGCTCCGACCCACACGCCTCTGGACTGTGGC +
Preference number: 6 (lower is better)
Translates to: VNILVRASRSPH*MAPTHTPLDCG
Trigger: GCCACAGTCCAGAGGCGTGTGGGTCGGAGCCATTCAGTGAGGGCTCCTGCTGGCACGGACAAGAATGTTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp GGGGGCCCCTTCTTACGTGGCCGCACAGCAAAGGACTaGCTGCGGTTAACATTCTTGTCCGTGCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: GGPFLRGRTAKD*LRLTFLSVPAG
Trigger: TCCTGCTGGCACGGACAAGAATGTTAACCGCAGTCAGTCCTTTGCTGTGCGGCCACGTAAGAAGGGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp GCAGGTGTAGGTGAGCCCTGGATCTTGGACACAGGCTaGGACAGAATGGGCTTGGGAGAGACGGGTGGCTTC +
Preference number: 6 (lower is better)
Translates to: AGVGEPWILDTG*DRMGLGETGGF
Trigger: GAAGCCACCCGTCTCTCCCAAGCCCATTCTGTCTCAGCCTGTGTCCAAGATCCAGGGCTCACCTACACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp GGCCACATTGCTCAAGCTGCCACTGCGATCTCCACCTaGAAAAGGCTTCCTCAGCACCCAGATCTCCTCCGG +
Preference number: 6 (lower is better)
Translates to: GHIAQAATAIST*KRLPQHPDLLR
Trigger: CCGGAGGAGATCTGGGTGCTGAGGAAGCCTTTTGCAGGTGGAGATCGCAGTGGCAGCTTGAGCAATGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp TCGATGGAGGAGGGGCGAGGGCCTTGTCCATCTTCCTaGCTTATCTTCTCCTCCACTGCCTGCAGTGCTGCA +
Preference number: 6 (lower is better)
Translates to: SMEEGRGPCPSS*LIFSSTACSAA
Trigger: TGCAGCACTGCAGGCAGTGGAGGAGAAGATAAGGCAGGAAGATGGACAAGGCCCTCGCCCCTCCTCCATCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp AGTTCACTGTCCTGGAAGGTGGTCATCTTGGGAGACTaGCACTCTGCTGCAGCAGGCTCAGATGGGGGCGGT +
Preference number: 6 (lower is better)
Translates to: SSLSWKVVILGD*HSAAAGSDGGG
Trigger: ACCGCCCCCATCTGAGCCTGCTGCAGCAGAGTGCCAGTCTCCCAAGATGACCACCTTCCAGGACAGTGAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GGAGGATTTCTCAACAGCAGCTGCACCTGCTTCAGCTaGGCCAGACAGGGCAGCTTGCAGCTCTCCACTGAG +
Preference number: 6 (lower is better)
Translates to: GGFLNSSCTCFS*ARQGSLQLSTE
Trigger: CTCAGTGGAGAGCTGCAAGCTGCCCTGTCTGGCCCAGCTGAAGCAGGTGCAGCTGCTGTTGAGAAATCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CCCGAGAGGTTGTCCTCGGAGTGGGTGGCAGGTGGTTaGAGGATTTCTCAACAGCAGCTGCACCTGCTTCAG +
Preference number: 6 (lower is better)
Translates to: PERLSSEWVAGG*RISQQQLHLLQ
Trigger: CTGAAGCAGGTGCAGCTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CACTCAGGCTGGACTCCCGAGAGGTTGTCCTCGGAGTaGGTGGCAGGTGGTTGGAGGATTTCTCAACAGCAG +
Preference number: 6 (lower is better)
Translates to: HSGWTPERLSSE*VAGGWRISQQQ
Trigger: CTGCTGTTGAGAAATCCTCCAACCACCTGCCACCCACTCCGAGGACAACCTCTCGGGAGTCCAGCCTGAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GCGTTTGGGTGGAGGTGGTGGGGGCCCCTTCTTACGTaGCCGCACAGCAAAGGACTGACTGCGGTTAACATT +
Preference number: 6 (lower is better)
Translates to: AFGWRWWGPLLT*PHSKGLTAVNI
Trigger: AATGTTAACCGCAGTCAGTCCTTTGCTGTGCGGCCACGTAAGAAGGGGCCCCCACCACCTCCACCCAAACGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp AACGGTGGCTGTGCCATTCTGATACACAGACAGTGGTaGGGGTGGCTCAGGGCCAGTGTCAGGCTCCTTAGC +
Preference number: 6 (lower is better)
Translates to: NGGCAILIHRQW*GWLRASVRLLS
Trigger: GCTAAGGAGCCTGACACTGGCCCTGAGCCACCCCCACCACTGTCTGTGTATCAGAATGGCACAGCCACCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp AGGACCCTCCGCACTTGCCTCACCCTTAGCTGGACCTCGAAGCCGTaGTCGGGCTGTGCCATCCTCCATAAAATGACTCTGCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: RTLRTCLTLSWTSKP*SGCAILHKMTLLCR
Trigger: CCTGCAGAGCAGAGTCATTTTATGGAGGATGGCACAGCCCGACAACGGCTTCGAGGTCCAGCTAAGGGTGAGGCAAGTGCGGAGGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp TCAGACTCTGTCAGGATGAATTTGACGTTCTCTTGTTGGCTCTGCTaGGCCCGGATGCGCCTCTTGAGCGTGGCACTGGCCTCTACCCGG +
Preference number: 6 (lower is better)
Translates to: SDSVRMNLTFSCWLC*ARMRLLSVALASTR
Trigger: CCGGGTAGAGGCCAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp CCTGAGCCTCCAGCAGCAGAGAGATCAATTCTGTGTTaGCATTCAGGGCGGCATGGTGCAGGGCTGAGAAGC +
Preference number: 6 (lower is better)
Translates to: PEPPAAERSILC*HSGRHGAGLRS
Trigger: GCTTCTCAGCCCTGCACCATGCCGCCCTGAATGGCAACACAGAATTGATCTCTCTGCTGCTGGAGGCTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp TTCACCACTTCACCGTCAGGCCCAATGGCCTCTTTGTaGTTCACAGAGGCCAACACGGTAGCTACTCGGCCC +
Preference number: 6 (lower is better)
Translates to: FTTSPSGPMASL*FTEANTVATRP
Trigger: GGGCCGAGTAGCTACCGTGTTGGCCTCTGTGAAGCACAAAGAGGCCATTGGGCCTGACGGTGAAGTGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GCGGCATGGTGCAGGGCTGAGAAGCCATCCGGGTCCTaGAAGTTGACATTGATCTTCTTGGTAGAGCCCAGG +
Preference number: 6 (lower is better)
Translates to: AAWCRAEKPSGS*KLTLIFLVEPR
Trigger: CCTGGGCTCTACCAAGAAGATCAATGTCAACTTCCAGGACCCGGATGGCTTCTCAGCCCTGCACCATGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GCCGCTGATCTCTGCCGTAATCTTCTTACGGTGGCCTaGCTTGGTAACGCCAATGGCTGTGAGGTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: AADLCRNLLTVA*LGNANGCEVLR
Trigger: CCTGAGGACCTCACAGCCATTGGCGTTACCAAGCCAGGCCACCGTAAGAAGATTACGGCAGAGATCAGCGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS CCA 72 bp CCTGGATCTTGGACACAGGCTGAGACAGAATGGGCTTaGGAGAGACGGGTGGCTTCACAGGCTTCCGTGCAT +
Preference number: 6 (lower is better)
Translates to: PGSWTQAETEWA*ERRVASQASVH
Trigger: ATGCACGGAAGCCTGTGAAGCCACCCGTCTCTCCCAAGCCCATTCTGTCTCAGCCTGTGTCCAAGATCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp GTCAGGATGAATTTGACGTTCTCTTGTTGGCTCTGCTaGGCCCGGATGCGCCTCTTGAGCGTGGCACTGGCC +
Preference number: 6 (lower is better)
Translates to: VRMNLTFSCWLC*ARMRLLSVALA
Trigger: GGCCAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp AGTGCTCTTCTCCTCGATGGAGGAGGGGCGAGGGCCTaGTCCATCTTCCTGCCTTATCTTCTCCTCCACTGC +
Preference number: 6 (lower is better)
Translates to: SALLLDGGGARA*SIFLPYLLLHC
Trigger: GCAGTGGAGGAGAAGATAAGGCAGGAAGATGGACAAGGCCCTCGCCCCTCCTCCATCGAGGAGAAGAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp TTCAGGCCGCTGATCTCTGCCGTAATCTTCTTACGGTGGCCTGGCTaGGTAACGCCAATGGCTGTGAGGTCCTCAGGGGTCATACGACTG +
Preference number: 6 (lower is better)
Translates to: FRPLISAVIFLRWPG*VTPMAVRSSGVIRL
Trigger: CAGTCGTATGACCCCTGAGGACCTCACAGCCATTGGCGTTACCAAGCCAGGCCACCGTAAGAAGATTACGGCAGAGATCAGCGGCCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS TCA 72 bp GGGTATGTGGCCTTCGTCGGATGGGACATTTACTGCTaGGCCTGCCTTCAGCACCAGCTTCATGGGCTCCTT +
Preference number: 6 (lower is better)
Translates to: GYVAFVGWDIYC*ACLQHQLHGLL
Trigger: AAGGAGCCCATGAAGCTGGTGCTGAAGGCAGGCTCAGCAGTAAATGTCCCATCCGACGAAGGCCACATACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp GAGATCAATTCTGTGTTGCCATTCAGGGCGGCATGGTaGAGGGCTGAGAAGCCATCCGGGTCCTGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: EINSVLPFRAAW*RAEKPSGSWKL
Trigger: CAACTTCCAGGACCCGGATGGCTTCTCAGCCCTGCACCATGCCGCCCTGAATGGCAACACAGAATTGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp AGGCAGCCAGTCAGGGATGTTCAGGCCGCTGATCTCTaGCGTAATCTTCTTACGGTGGCCTGGCTTGGTAAC +
Preference number: 6 (lower is better)
Translates to: RQPVRDVQAADL*RNLLTVAWLGN
Trigger: GTTACCAAGCCAGGCCACCGTAAGAAGATTACGGCAGAGATCAGCGGCCTGAACATCCCTGACTGGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS GCA 72 bp CAGCAGCTCATCCCTCTCAGGCTCACTGTCGGATGCTaGATAGCGATTCAAGCTGTGGGCACGTTTCTTGGG +
Preference number: 6 (lower is better)
Translates to: QQLIPLRLTVGC*IAIQAVGTFLG
Trigger: CCCAAGAAACGTGCCCACAGCTTGAATCGCTATGCAGCATCCGACAGTGAGCCTGAGAGGGATGAGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp AAGACAGCTCCAACATGGCTGCGATGCTCTTCACACTaGCAGCACTACCTGTGTCCACACTGCCGGCGAGAT +
Preference number: 6 (lower is better)
Translates to: KTAPTWLRCSSH*QHYLCPHCRRD
Trigger: ATCTCGCCGGCAGTGTGGACACAGGTAGTGCTGGCAGTGTGAAGAGCATCGCAGCCATGTTGGAGCTGTCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp CACCCCCAATGGAAGACAGCTCCAACATGGCTGCGATaGTCTTCACACTGCCAGCACTACCTGTGTCCACAC +
Preference number: 6 (lower is better)
Translates to: HPQWKTAPTWLR*SSHCQHYLCPH
Trigger: GTGTGGACACAGGTAGTGCTGGCAGTGTGAAGAGCATCGCAGCCATGTTGGAGCTGTCTTCCATTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp TTCAGGCCGCTGATCTCTGCCGTAATCTTCTTACGGTaGCCTGGCTTGGTAACGCCAATGGCTGTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: FRPLISAVIFLR*PGLVTPMAVRS
Trigger: GGACCTCACAGCCATTGGCGTTACCAAGCCAGGCCACCGTAAGAAGATTACGGCAGAGATCAGCGGCCTGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS CCA 72 bp AGGGCAGCTTGCAGCTCTCCACTGAGTTCACTGTCCTaGAAGGTGGTCATCTTGGGAGACTGGCACTCTGCT +
Preference number: 6 (lower is better)
Translates to: RAACSSPLSSLS*KVVILGDWHSA
Trigger: AGCAGAGTGCCAGTCTCCCAAGATGACCACCTTCCAGGACAGTGAACTCAGTGGAGAGCTGCAAGCTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp ACCTGCAGAGCCGCTGAGGCCTCTCGAAGCAGTTGCTaGATCTCCTTGCTGGCCTGGGACGTTGTAAATTGG +
Preference number: 6 (lower is better)
Translates to: TCRAAEASRSSC*ISLLAWDVVNW
Trigger: CCAATTTACAACGTCCCAGGCCAGCAAGGAGATCAAGCAACTGCTTCGAGAGGCCTCAGCGGCTCTGCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp CTGATCTCTGCCGTAATCTTCTTACGGTGGCCTGGCTaGGTAACGCCAATGGCTGTGAGGTCCTCAGGGGTC +
Preference number: 6 (lower is better)
Translates to: LISAVIFLRWPG*VTPMAVRSSGV
Trigger: GACCCCTGAGGACCTCACAGCCATTGGCGTTACCAAGCCAGGCCACCGTAAGAAGATTACGGCAGAGATCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS CAA 72 bp CGCACTTGCCTCACCCTTAGCTGGACCTCGAAGCCGTaGTCGGGCTGTGCCATCCTCCATAAAATGACTCTG +
Preference number: 6 (lower is better)
Translates to: RTCLTLSWTSKP*SGCAILHKMTL
Trigger: CAGAGTCATTTTATGGAGGATGGCACAGCCCGACAACGGCTTCGAGGTCCAGCTAAGGGTGAGGCAAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp CTTCACTGTGTCAGACTCTGTCAGGATGAATTTGACGTTCTCTTGTaGGCTCTGCTTGGCCCGGATGCGCCTCTTGAGCGTGGCACTGGC +
Preference number: 6 (lower is better)
Translates to: LHCVRLCQDEFDVLL*ALLGPDAPLERGTG
Trigger: GCCAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGACACAGTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp GCGCTTCACTGTGTCAGACTCTGTCAGGATGAATTTGACGTTCTCTaGTTGGCTCTGCTTGGCCCGGATGCGCCTCTTGAGCGTGGCACT +
Preference number: 6 (lower is better)
Translates to: ALHCVRLCQDEFDVL*LALLGPDAPLERGT
Trigger: AGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGACACAGTGAAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 90 bp GCCTTAGGCCTGCGCTTCACTGTGTCAGACTCTGTCAGGATGAATTaGACGTTCTCTTGTTGGCTCTGCTTGGCCCGGATGCGCCTCTTG +
Preference number: 6 (lower is better)
Translates to: ALGLRFTVSDSVRMN*TFSCWLCLARMRLL
Trigger: CAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGACACAGTGAAGCGCAGGCCTAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS GCA 72 bp TCTGTCAGGATGAATTTGACGTTCTCTTGTTGGCTCTaGTTGGCCCGGATGCGCCTCTTGAGCGTGGCACTG +
Preference number: 6 (lower is better)
Translates to: SVRMNLTFSCWL*LARMRLLSVAL
Trigger: CAGTGCCACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GGGCTATCTCCTGGGCTGGACTCAGAGACTGACTTCTaGGAAAGCACGGTTGCCAGGAGCTTAACTCCTTCA +
Preference number: 6 (lower is better)
Translates to: GLSPGLDSETDF*ESTVARSLTPS
Trigger: TGAAGGAGTTAAGCTCCTGGCAACCGTGCTTTCCCAGAAGTCAGTCTCTGAGTCCAGCCCAGGAGATAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp GTGCTGTCTGGCTGTAGGTGTTCCTCACCTGGGCATTaGTCCCACTATCCAACAGTAGCCGAACCACTTCTG +
Preference number: 6 (lower is better)
Translates to: VLSGCRCSSPGH*SHYPTVAEPLL
Trigger: CAGAAGTGGTTCGGCTACTGTTGGATAGTGGGATCAATGCCCAGGTGAGGAACACCTACAGCCAGACAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp CACCAGCACCTTGTAATACTGGGCCAGACCAATCATTaGCAGCCACACAGCCAGGTTAGCCTTGCCCTCAGA +
Preference number: 6 (lower is better)
Translates to: HQHLVILGQTNH*QPHSQVSLALR
Trigger: TCTGAGGGCAAGGCTAACCTGGCTGTGTGGCTGTCAATGATTGGTCTGGCCCAGTATTACAAGGTGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000234717.2
CDS CCA 72 bp TCAGACTCTGTCAGGATGAATTTGACGTTCTCTTGTTaGCTCTGCTTGGCCCGGATGCGCCTCTTGAGCGTG +
Preference number: 6 (lower is better)
Translates to: SDSVRMNLTFSC*LCLARMRLLSV
Trigger: CACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp GTCAGACTCTGTCAGGATGAATTTGACGTTCTCTTGTaGGCTCTGCTTGGCCCGGATGCGCCTCTTGAGCGT +
Preference number: 6 (lower is better)
Translates to: VRLCQDEFDVLL*ALLGPDAPLER
Trigger: ACGCTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS TCA 72 bp CACCAGCACCTTGTAATACTGGGCCAGACCAATCATTaGCAGCCACACAGCCAGGTTAGCGGGTTTGTGTTC +
Preference number: 6 (lower is better)
Translates to: HQHLVILGQTNH*QPHSQVSGFVF
Trigger: GAACACAAACCCGCTAACCTGGCTGTGTGGCTGTCAATGATTGGTCTGGCCCAGTATTACAAGGTGCTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000024958.9
CDS GCA 72 bp GGCCTGGGACGTTGTAAATTGGTGTACAATGTCCAGTaGTGTCTGGCTGTAGGTGTTCCTCACCTGGGCATT +
Preference number: 6 (lower is better)
Translates to: GLGRCKLVYNVQ*CLAVGVPHLGI
Trigger: AATGCCCAGGTGAGGAACACCTACAGCCAGACAGCACTGGACATTGTACACCAATTTACAACGTCCCAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp CCGGTTGTCATGAATACAGCCTTTCCACCGGCCATCTaGATGCTGTTCAAGTACCGTGATAATGTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: PVVMNTAFPPAI*MLFKYRDNVPS
Trigger: GCTGGGGACATTATCACGGTACTTGAACAGCATCCAGATGGCCGGTGGAAAGGCTGTATTCATGACAACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp TGTGTCAGACTCTGTCAGGATGAATTTGACGTTCTCTaGTTGGCTCTGCTTGGCCCGGATGCGCCTCTTGAG +
Preference number: 6 (lower is better)
Translates to: CVRLCQDEFDVL*LALLGPDAPLE
Trigger: CTCAAGAGGCGCATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CAA 72 bp CTGCGCTTCACTGTGTCAGACTCTGTCAGGATGAATTaGACGTTCTCTTGTTGGCTCTGCTTGGCCCGGATG +
Preference number: 6 (lower is better)
Translates to: LRFTVSDSVRMN*TFSCWLCLARM
Trigger: CATCCGGGCCAAGCAGAGCCAACAAGAGAACGTCAAATTCATCCTGACAGAGTCTGACACAGTGAAGCGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2
CDS CCA 72 bp GCCTCTCGAAGCAGTTGCTTGATCTCCTTGCTGGCCTaGGACGTTGTAAATTGGTGTACAATGTCCAGTGCT +
Preference number: 6 (lower is better)
Translates to: ASRSSCLISLLA*DVVNWCTMSSA
Trigger: AGCACTGGACATTGTACACCAATTTACAACGTCCCAGGCCAGCAAGGAGATCAAGCAACTGCTTCGAGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000024958.9
ENSMUST00000234717.2