Pregenerated sensors for CASK (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031012Ensembl transcript IDs: ENSMUST00000033321.11, ENSMUST00000115435.9, ENSMUST00000115436.9, ENSMUST00000115438.10, ENSMUST00000124710.2, ENSMUST00000128012.2, ENSMUST00000128095.3, ENSMUST00000139735.3, ENSMUST00000156096.8
Found 619 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTGCGGATGCCCGTCCCAGAGACGGTGCTGCTCTTTGCCTATAGCTaGTACTGCTGCTGTGGCCTGAAGGCACCAACAGGAAGTGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: LRMPVPETVLLFAYS*YCCCGLKAPTGSAD Trigger: ATCTGCACTTCCTGTTGGTGCCTTCAGGCCACAGCAGCAGTAGCAGCTATAGGCAAAGAGCAGCACCGTCTCTGGGACGGGCATCCGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | GAGCAAGAGGAAGGAGAGACCACAGGTGGCCTTGTGAGTCACATGTaGTCCAAGCTGTGCCCTGGCAGGCTGCTTTGTTGCCCTACCAAC | + |
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Preference number: 1 (lower is better) Translates to: EQEEGETTGGLVSHM*SKLCPGRLLCCPTN Trigger: GTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGACTCACAAGGCCACCTGTGGTCTCTCCTTCCTCTTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | GACCACAGGTGGCCTTGTGAGTCACATGTGGTCCAAGCTGTGCCCTaGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: DHRWPCESHVVQAVP*QAALLPYQPILIPG Trigger: CCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGACTCACAAGGCCACCTGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | AGTCTGAATGGCAATGCACCTACACTGCACTGGAACACGATGCTGTaGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATC | + |
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Preference number: 1 (lower is better) Translates to: SLNGNAPTLHWNTML*SQHHLPAEDIPGDI Trigger: GATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTGTTCCAGTGCAGTGTAGGTGCATTGCCATTCAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | ACCACCCCAGAACTGAGTCTGAATGGCAATGCACCTACACTGCACTaGAACACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGAC | + |
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Preference number: 1 (lower is better) Translates to: TTPELSLNGNAPTLH*NTMLWSQHHLPAED Trigger: GTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTGTTCCAGTGCAGTGTAGGTGCATTGCCATTCAGACTCAGTTCTGGGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | GGAAGGATGCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTaGGGACAGAAGTTCCCCATGTCCCCGAGTCCTGGAGTACCTTTT | + |
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Preference number: 1 (lower is better) Translates to: GRMPPVLFSQTPEGQ*GQKFPMSPSPGVPF Trigger: AAAAGGTACTCCAGGACTCGGGGACATGGGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGCATCCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | GGACGCGCTTCCTCTTTTCCCCTACTTCCGGATGGATGTGGGAGCTaGACTTCACTCTGTAAGCTGGGCAACCCGAGACTTCCCACAAGT | + |
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Preference number: 1 (lower is better) Translates to: GRASSFPLLPDGCGS*TSLCKLGNPRLPTS Trigger: ACTTGTGGGAAGTCTCGGGTTGCCCAGCTTACAGAGTGAAGTTCAGCTCCCACATCCATCCGGAAGTAGGGGAAAAGAGGAAGCGCGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | AGACGGTGCTGCTCTTTGCCTATAGCTGCTACTGCTGCTGTGGCCTaGAGGCACCAACAGGAAGTGCAGATAGGAAGGTTGGACGCGCTT | + |
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Preference number: 1 (lower is better) Translates to: RRCCSLPIAATAAVA*RHQQEVQIGRLDAL Trigger: AAGCGCGTCCAACCTTCCTATCTGCACTTCCTGTTGGTGCCTTCAGGCCACAGCAGCAGTAGCAGCTATAGGCAAAGAGCAGCACCGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | GTGAGTCACATGTGGTCCAAGCTGTGCCCTGGCAGGCTGCTTTGTTaGCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: VSHMWSKLCPGRLLC*PTNRYLFLGLRWVS Trigger: ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGACTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | GGAGAGACCACAGGTGGCCTTGTGAGTCACATGTGGTCCAAGCTGTaGCCTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTC | + |
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Preference number: 1 (lower is better) Translates to: GETTGGLVSHMWSKL*PGRLLCCPTNRYLF Trigger: GAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGACTCACAAGGCCACCTGTGGTCTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | GGCCTGCCTGCCCCAGGCCTTAGATATAGGGAAGGGACCGCTTCCTaGCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTATTCT | + |
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Preference number: 1 (lower is better) Translates to: GLPAPGLRYREGTAS*HSSFAGELCSFIYS Trigger: AGAATAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCTTCCCTATATCTAAGGCCTGGGGCAGGCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | GGGAAGTCAGGAATGGTCTCTCCCATCCCTCTAACAGCTAAGACTTaGGGATGCCCGTCCCAGAGACGGTGCTGCTCTTTGCCTATAGCT | + |
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Preference number: 1 (lower is better) Translates to: GKSGMVSPIPLTAKT*GCPSQRRCCSLPIA Trigger: AGCTATAGGCAAAGAGCAGCACCGTCTCTGGGACGGGCATCCGCAAGTCTTAGCTGTTAGAGGGATGGGAGAGACCATTCCTGACTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | GTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATaGAGGGGCAACACTCTAGTGACCTCTGGCAGTCTGAGAACCCCA | + |
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Preference number: 1 (lower is better) Translates to: VSKDQSHVSALFSHP*RGNTLVTSGSLRTP Trigger: TGGGGTTCTCAGACTGCCAGAGGTCACTAGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | GCCAAGTGCCAAGGTTTTGCACATACACAGAGCTGGAGTTGTGCTTaGGGCCAGCAATGTGGTCTCCCATGTGGCTGCAAACATCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: AKCQGFAHTQSWSCA*GQQCGLPCGCKHLL Trigger: AAGGAGATGTTTGCAGCCACATGGGAGACCACATTGCTGGCCCCAAGCACAACTCCAGCTCTGTGTATGTGCAAAACCTTGGCACTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | GCAACTCCTGAAGTTTTCTCCCTCCACCTAGCAAGAGCTCACTGTTaGGTCTGTCTCTGGTGTGCTGTTAGGCCACCCTTACTTGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: ATPEVFSLHLARAHC*VCLWCAVRPPLLVG Trigger: TCCCACAAGTAAGGGTGGCCTAACAGCACACCAGAGACAGACTCAACAGTGAGCTCTTGCTAGGTGGAGGGAGAAAACTTCAGGAGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | CCATGTCCCCGAGTCCTGGAGTACCTTTTTCAGTCTGTGCTCACCTaGACTTCAGCTGGCTTCACTTTCCTATGCTCATTCTGTCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: PCPRVLEYLFQSVLT*TSAGFTFLCSFCLG Trigger: CCCCAGACAGAATGAGCATAGGAAAGTGAAGCCAGCTGAAGTTCAGGTGAGCACAGACTGAAAAAGGTACTCCAGGACTCGGGGACATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | TCACCTGAACTTCAGCTGGCTTCACTTTCCTATGCTCATTCTGTCTaGGGGGACGTGGTAGATGGTCACACACAGGCCTTGCCAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: SPELQLASLSYAHSV*GDVVDGHTQALPAF Trigger: AAATGCTGGCAAGGCCTGTGTGTGACCATCTACCACGTCCCCCCAGACAGAATGAGCATAGGAAAGTGAAGCCAGCTGAAGTTCAGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | CCTTATGCTCAGTACTACTGCAGTAATGATGTCTGGCCTGGGCACTaGTTAGGATCGAGGTCAGCACTACACAGCCCTAAGCAACTCCTG | + |
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Preference number: 1 (lower is better) Translates to: PYAQYYCSNDVWPGH*LGSRSALHSPKQLL Trigger: CAGGAGTTGCTTAGGGCTGTGTAGTGCTGACCTCGATCCTAATCAGTGCCCAGGCCAGACATCATTACTGCAGTAGTACTGAGCATAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | TCTGCCAAGGCACAAAGTGATGGAGGCCAGCTAACCCTGAAGAAATaGAAACGATGGTGTGTTTCCAAGGACCAGAGTCATGTCAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: SAKAQSDGGQLTLKK*KRWCVSKDQSHVSA Trigger: GGCACTGACATGACTCTGGTCCTTGGAAACACACCATCGTTTTCATTTCTTCAGGGTTAGCTGGCCTCCATCACTTTGTGCCTTGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | TGTGGAGGAATGCCTACTTCTACTCCCAAGCACAAATCCCTCTGTTaGGATTCTCTCCTGGGTCCAAAAGACTCATCATCCCCGGACCTT | + |
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Preference number: 1 (lower is better) Translates to: CGGMPTSTPKHKSLC*DSLLGPKDSSSPDL Trigger: AAGGTCCGGGGATGATGAGTCTTTTGGACCCAGGAGAGAATCTCAACAGAGGGATTTGTGCTTGGGAGTAGAAGTAGGCATTCCTCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | AAAGATGTGTTCAGGGGCTTCAGTGTGCCTCAGCATCAGCATCCTTaGGAAGAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAAC | + |
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Preference number: 1 (lower is better) Translates to: KDVFRGFSVPQHQHP*EENRWSRLCSVLTN Trigger: GTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTCTTCGCAAGGATGCTGATGCTGAGGCACACTGAAGCCCCTGAACACATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | CAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCAATaGACCTACACTGCACTGGAACACGATGCTGTGGTCTCAGCACCA | + |
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Preference number: 1 (lower is better) Translates to: QSFMQNHPRTESEWQ*TYTALEHDAVVSAP Trigger: TGGTGCTGAGACCACAGCATCGTGTTCCAGTGCAGTGTAGGTGCATTGCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | AAGAGGAGCTGTTCAGGCCAGAACTCATTCTGCCAAGGCACAAAGTaGTGGAGGCCAGCTAACCCTGAAGAAATGAAAACGATGGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: KRSCSGQNSFCQGTK*WRPANPEEMKTMVC Trigger: ACACACCATCGTTTTCATTTCTTCAGGGTTAGCTGGCCTCCATCACTTTGTGCCTTGGCAGAATGAGTTCTGGCCTGAACAGCTCCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | GAAATGAAAACGATGGTGTGTTTCCAAGGACCAGAGTCATGTCAGTaGCCTGTTCTCTCATCCATGAAGGGGCAACACTCTAGTGACCTC | + |
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Preference number: 1 (lower is better) Translates to: EMKTMVCFQGPESCQ*PVLSSMKGQHSSDL Trigger: GAGGTCACTAGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACACACCATCGTTTTCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | CATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATaGCAATGCACCTACACTGCACTGGAACACGATGCTGTGGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: HWQSFMQNHPRTESE*QCTYTALEHDAVVS Trigger: TGAGACCACAGCATCGTGTTCCAGTGCAGTGTAGGTGCATTGCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | TGTGTGTGTGTTCTGGCCGATGAAATGGAAGCAGTCAAGAAGCTTTaGGCAATTTCCTCTGATTGCTCGGGGTACGGCTGTACTGATAGT | + |
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Preference number: 1 (lower is better) Translates to: CVCVLADEMEAVKKL*AISSDCSGYGCTDS Trigger: ACTATCAGTACAGCCGTACCCCGAGCAATCAGAGGAAATTGCTCAAAGCTTCTTGACTGCTTCCATTTCATCGGCCAGAACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | AGAATACTATGCAGTTTCTCTTCTCCCCCTGTCACACGAGATAACTaGTTAGGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTT | + |
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Preference number: 1 (lower is better) Translates to: RILCSFSSPPVTRDN*LGFRLVLCWLATTL Trigger: AAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCCTAATCAGTTATCTCGTGTGACAGGGGGAGAAGAGAAACTGCATAGTATTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | CTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTaGCCGATGAAATGGAAGCAGTCAAGAAGCTTTGAGCAATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LVCVCVCVCVCVCVF*PMKWKQSRSFEQFP Trigger: AGGAAATTGCTCAAAGCTTCTTGACTGCTTCCATTTCATCGGCCAGAACACACACACACACACACACACACACACACACACACACACTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR TCA 90 bp | AGCGTTTGTGACAAGCTAAGCTTATTTTTCCCCCGTGTAAGAAACTaGCCTGAGATGCTAAAGGAACATCCCATCAGTGGGAGACAAGAG | + |
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Preference number: 1 (lower is better) Translates to: SVCDKLSLFFPRVRN*PEMLKEHPISGRQE Trigger: CTCTTGTCTCCCACTGATGGGATGTTCCTTTAGCATCTCAGGTCAGTTTCTTACACGGGGGAAAAATAAGCTTAGCTTGTCACAAACGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | ACATTTACAAAGAATCCGAACCTTTCCAACCCCTTCAGCTCCTCTTaGAAGCTAAGGCTTTGCTGTACCCTGCGAATACTTACAATCGGA | + |
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Preference number: 1 (lower is better) Translates to: TFTKNPNLSNPFSSS*KLRLCCTLRILTIG Trigger: TCCGATTGTAAGTATTCGCAGGGTACAGCAAAGCCTTAGCTTGCAAGAGGAGCTGAAGGGGTTGGAAAGGTTCGGATTCTTTGTAAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CCA 90 bp | ATAGGTTTACAACTTAGTCATAATAGCAATTTATTCTTACTCCCCTaGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACAGAT | + |
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Preference number: 1 (lower is better) Translates to: IGLQLSHNSNLFLLP*VCPVNGMYLAVITD Trigger: ATCTGTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATGACTAAGTTGTAAACCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR GCA 90 bp | TTACAACTTAGTCATAATAGCAATTTATTCTTACTCCCCTGGGTGTaGCCCGTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: LQLSHNSNLFLLPWV*PVNGMYLAVITDCF Trigger: AAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATGACTAAGTTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGCAACACTCTAGTGACCTCTGGCAGTCTGAGAACCCCAGCCTGGGCCTCCTGTGCCCTGGCAGGCTaGTTTGTTGCCCTACCAACC | + |
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Preference number: 2 (lower is better) Translates to: RGNTLVTSGSLRTPAWASCALAG*FVALPT Trigger: GGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACA...GGAGGCCCAGGCTGGGGTTCTCAGACTGCCAGAGGTCACTAGAGTGTTGCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR GCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATCAGGTGACTCCCCTGTaGCAAGGGATAGAGCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHQVTPL*QGIEQE Trigger: CTCTTGCTCTATCCCTTGGCACAGGGGAGTCACCTG...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR CCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATCTGAGAACCCCAGCCTaGGCCTCCTCTAGTGATTCT | + |
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Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHLRTPA*ASSSDS Trigger: AGAATCACTAGAGGAGGCCCAGGCTGGGGTTCTCAG...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR CCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATCACTCTAGTGACCTCTaGCAGTCTGAGAACCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHHSSDL*QSENPS Trigger: GCTGGGGTTCTCAGACTGCCAGAGGTCACTAGAGTG...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR GCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATTCAGGGGCTTCAGTGTaGCTCAGCATCAGCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHSGASV*LSISIL Trigger: AAGGATGCTGATGCTGAGGCACACTGAAGCCCCTGA...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGCCACAGGTGGCCTTGTaGGTCACATGTGGTCCAAGC | + |
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Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVPQVAL*VTCGPS Trigger: GCTTGGACCACATGTGACTCACAAGGCCACCTGTGG...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR CCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATGACAAGAGAATGCTTTaGGCTGCCTCACCCTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHDKRML*AASPLR Trigger: CCTTAAGGGTGAGGCAGCCCAAAGCATTCTCTTGTC...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CAA 90 bp | TGTGAGTCACATGTGGTCCAAGCTGTGCCCTGGCAGGCTGCTTTGTaGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: CESHVVQAVPWQAAL*PYQPILIPGPSMGQ Trigger: CTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGACTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CAA 90 bp | CCTTGTGAGTCACATGTGGTCCAAGCTGTGCCCTGGCAGGCTGCTTaGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGT | + |
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Preference number: 2 (lower is better) Translates to: PCESHVVQAVPWQAA*LPYQPILIPGPSMG Trigger: ACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGACTCACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTACCACAGGTGGCCTTGTaGGTCACATGTGGTCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLPQVAL*VTCGPS Trigger: GCTTGGACCACATGTGACTCACAAGGCCACCTGTGG...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGTGCCAAGGCACAAAGTaGTGGAGGCCAGCTAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVCQGTK*WRPANP Trigger: AGGGTTAGCTGGCCTCCATCACTTTGTGCCTTGGCA...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGGGGCTTGATTTTTGGAATGCTTAGCAGTGTGCCCTCTATTCTTTCCAAGGTGGAGAAGAGCAGGTaGGCTGCTGGGGCAGCCGCT | + |
|
Preference number: 2 (lower is better) Translates to: ARGLIFGMLSSVPSILSKVEKSR*AAGAAA Trigger: AGCGGCTGCCCCAGCAGCTCACCTGCTCTTCTCCAC...CTTGGAAAGAATAGAGGGCACACTGCTAAGCATTCCAAAAATCAAGCCCCTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATGCATTTCTGGAGATGTaGTCTCAAGAGCAAGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHAFLEM*SQEQVE Trigger: CTCCACTTGCTCTTGAGAGCACATCTCCAGAAATGC...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTAGAGCAGGTGAGCTGCTaGGGCAGCCGCTGGGTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLEQVSC*GSRWVL Trigger: TAGAACCCAGCGGCTGCCCCAGCAGCTCACCTGCTC...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 90 bp | AGCCAAGTGCCAAGGTTTTGCACATACACAGAGCTGGAGTTGTGCTaGGGGCCAGCAATGTGGTCTCCCATGTGGCTGCAAACATCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SQVPRFCTYTELELC*GPAMWSPMWLQTSP Trigger: AGGAGATGTTTGCAGCCACATGGGAGACCACATTGCTGGCCCCAAGCACAACTCCAGCTCTGTGTATGTGCAAAACCTTGGCACTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 90 bp | AGCAGTAGCCAAGTGCCAAGGTTTTGCACATACACAGAGCTGGAGTaGTGCTTGGGGCCAGCAATGTGGTCTCCCATGTGGCTGCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: SSSQVPRFCTYTELE*CLGPAMWSPMWLQT Trigger: TGTTTGCAGCCACATGGGAGACCACATTGCTGGCCCCAAGCACAACTCCAGCTCTGTGTATGTGCAAAACCTTGGCACTTGGCTACTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTACCTGGGTGTGCCCCGTaGACGGAATGTACTTGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLPGCAP*TECTWL Trigger: CAGCCAAGTACATTCCGTTCACGGGGCACACCCAGG...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATCTAACCCTGAAGAAATaGAAACGATGGTGTGTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHLTLKK*KRWCVS Trigger: GGAAACACACCATCGTTTTCATTTCTTCAGGGTTAG...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGGGAAGGGTGAGATGCTaGAAACAGGAGAGGAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVGRVRC*KQERSM Trigger: CATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCC...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCTCGCGACTGTCCACATaGATTAAGAGTCAAGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: ATSALLSDSRRPVRTEVPSRLST*IKSQDP Trigger: TGGGTCTTGACTCTTAATGCATGTGGACAGTCGCGA...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTAGTCCAAGCTGTGCCCTaGCAGGCTGCTTTGTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLVQAVP*QAALLP Trigger: GGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGAC...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCCTCCTTCTCCTGTTGTaGGGAGTAGGGCTGGGGCGG | + |
|
Preference number: 2 (lower is better) Translates to: EHIGKALCKTTPELSLNGLLLLL*GVGLGR Trigger: CCGCCCCAGCCCTACTCCCCACAACAGGAGAAGGAG...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGATGTGGTCTCCCATGTaGCTGCAAACATCTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVMWSPM*LQTSPS Trigger: GGAAGGAGATGTTTGCAGCCACATGGGAGACCACAT...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CAA 90 bp | CAGGCCTTAGATATAGGGAAGGGACCGCTTCCTGCCACTCTTCCTTaGCTGGGGAACTCTGCAGCTTTATCTATTCTGCCACCAATAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QALDIGKGPLPATLP*LGNSAALSILPPIA Trigger: GGCTATTGGTGGCAGAATAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCTTCCCTATATCTAAGGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGGTGTGTTCTGGCCGATaGAATGGAAGCAGTCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVVCSGR*NGSSQE Trigger: TTCTTGACTGCTTCCATTTCATCGGCCAGAACACAC...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGCAAGTGCCAAGGTTTTaGACATACACAGAGCTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVQVPRF*TYTELE Trigger: CTCCAGCTCTGTGTATGTGCAAAACCTTGGCACTTG...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCGTCCAAGCTGTGCCCTaGCAGGCTGCTTTGTTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: EHIGKALCKTTPELSLNGVQAVP*QAALLP Trigger: GGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGAC...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATGGCACTGACAAAGAATaGTCTACAAACAGAAACCAA | + |
|
Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHGTDKE*STNRNQ Trigger: TTGGTTTCTGTTTGTAGACCATTCTTTGTCAGTGCC...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTACCTTGCCAGCATTTCTaGAGATGTGCTCTCAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLPCQHF*RCALKS Trigger: GCTCTTGAGAGCACATCTCCAGAAATGCTGGCAAGG...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CAA 90 bp | CTGTGGAGGAATGCCTACTTCTACTCCCAAGCACAAATCCCTCTGTaGAGATTCTCTCCTGGGTCCAAAAGACTCATCATCCCCGGACCT | + |
|
Preference number: 2 (lower is better) Translates to: LWRNAYFYSQAQIPL*RFSPGSKRLIIPGP Trigger: AGGTCCGGGGATGATGAGTCTTTTGGACCCAGGAGAGAATCTCAACAGAGGGATTTGTGCTTGGGAGTAGAAGTAGGCATTCCTCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGCGGGGGATGACATGGTaGATGCTTTTAAAGCAACAA | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVRGMTW*MLLKQQ Trigger: TTGTTGCTTTAAAAGCATTCACCATGTCATCCCCCG...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGAATAGTTGGGAAGGGTaGGATGCTGAAAACAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVNSWEG*DAENRR Trigger: TCTCCTGTTTTCAGCATCTCACCCTTCCCAACTATT...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGAAAGGACCTGCACTCTaGCTTTCCAACATTTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVKGPAL*LSNISA Trigger: AGCTGAAATGTTGGAAAGCCAGAGTGCAGGTCCTTT...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGAGAACTGAGTCTGAATaGCAATGCACCTACACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVRTESE*QCTYTA Trigger: TGCAGTGTAGGTGCATTGCCATTCAGACTCAGTTCT...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 90 bp | CTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACAGATaGTTTTGTCCAACACAGACACACCGACAGCATAAACGCTCGCGA | + |
|
Preference number: 2 (lower is better) Translates to: LGVPRERNVLGCNYR*FCPTQTHRQHKRSR Trigger: TCGCGAGCGTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCGGGACCACGACCTGCTaGCACAAGGCCGATAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: EHIGKALCKTTPELSLNGGTTTC*HKADNK Trigger: TTTGTTATCGGCCTTGTGTCAGCAGGTCGTGGTCCC...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCAGGGGCTTGATTTTTGGAATGCTTAGCAGTGTGCCCTCTATTCTTTCCAAGCAGGTACTGAGCCACTaGAAAGGGTGCCTTATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: ARGLIFGMLSSVPSILSKQVLSH*KGCLML Trigger: GAGCATAAGGCACCCTTTTCAGTGGCTCAGTACCTG...CTTGGAAAGAATAGAGGGCACACTGCTAAGCATTCCAAAAATCAAGCCCCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTAGCAGTCAAGAAGCTTTaGGCAATTTCCTCTGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLAVKKL*AISSDC Trigger: GCAATCAGAGGAAATTGCTCAAAGCTTCTTGACTGC...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATTCAGTTTGTAGCAAATaGCTAAACTGGTTTCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: HDAVVSAPPACRGHPRRHSVCSK*LNWFLH Trigger: ATGAAGAAACCAGTTTAGGCATTTGCTACAAACTGA...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCGCCTATAGCTGCTACTaGTGCTGTGGCCTGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: EHIGKALCKTTPELSLNGAYSCY*CCGLKA Trigger: TGCCTTCAGGCCACAGCAGCAGTAGCAGCTATAGGC...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAAACTGCTGCTGTGGCCTaGAGGCACCAACAGGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: ERTHWQSFMQNHPRTESETAAVA*RHQQEV Trigger: CACTTCCTGTTGGTGCCTTCAGGCCACAGCAGCAGT...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGGGGCTTGATTTTTGGAATGCTTAGCAGTGTGCCCTCTATTCTTTCCAAGGGCAGGCTGCTTTGTTaGCCTACCAACCGATACTTA | + |
|
Preference number: 2 (lower is better) Translates to: ARGLIFGMLSSVPSILSKGRLLC*PTNRYL Trigger: TAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCC...CTTGGAAAGAATAGAGGGCACACTGCTAAGCATTCCAAAAATCAAGCCCCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGGGAATACGATGCATGTaGGAAGTAATTACTGCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVGIRCM*EVITAL Trigger: TAAAGCAGTAATTACTTCTCACATGCATCGTATTCC...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGGAAATGCAAGGGATGTaGATAGGTTTACAACTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: GFRLVLCWLATTLVVVQVEMQGM*IGLQLS Trigger: ACTAAGTTGTAAACCTATGCACATCCCTTGCATTTC...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAACAGGTGACTCCCCTGTaGCAAGGGATAGAGCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: ERTHWQSFMQNHPRTESEQVTPL*QGIEQE Trigger: CTCTTGCTCTATCCCTTGGCACAGGGGAGTCACCTG...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCCTCTCTGTGGAGGAATaGCTACTTCTACTCCCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: EHIGKALCKTTPELSLNGLSVEE*LLLLPS Trigger: GCTTGGGAGTAGAAGTAGGCATTCCTCCACAGAGAG...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCACCGATACTTATTCCTaGGCCTTCGATGGGTCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: VGKGEMLKTGEEYEHKNATDTYS*AFDGSV Trigger: CACTGACCCATCGAAGGCCCAGGAATAAGTATCGGT...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAACTTGTGAGTCACATGTaGTCCAAGCTGTGCCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ERTHWQSFMQNHPRTESELVSHM*SKLCPG Trigger: GCCAGGGCACAGCTTGGACCACATGTGACTCACAAG...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 90 bp | GACATTTACAAAGAATCCGAACCTTTCCAACCCCTTCAGCTCCTCTaGCAAGCTAAGGCTTTGCTGTACCCTGCGAATACTTACAATCGG | + |
|
Preference number: 2 (lower is better) Translates to: DIYKESEPFQPLQLL*QAKALLYPANTYNR Trigger: CCGATTGTAAGTATTCGCAGGGTACAGCAAAGCCTTAGCTTGCAAGAGGAGCTGAAGGGGTTGGAAAGGTTCGGATTCTTTGTAAATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACGGGACCACGACCTGCTaGCACAAGGCCGATAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: VNGMYLAVITDCFVQHRHGTTTC*HKADNK Trigger: TTTGTTATCGGCCTTGTGTCAGCAGGTCGTGGTCCC...GTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCTCGCGACTGTCCACATaGATTAAGAGTCAAGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: VGKGEMLKTGEEYEHKNASRLST*IKSQDP Trigger: TGGGTCTTGACTCTTAATGCATGTGGACAGTCGCGA...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTCTAACAGCTAAGACTTaGGGATGCCCGTCCCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FLLLGPFAQVHSRELMEGLTAKT*GCPSQR Trigger: TCTCTGGGACGGGCATCCGCAAGTCTTAGCTGTTAG...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCCACCTGAACTTCAGCTaGCTTCACTTTCCTATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: EHIGKALCKTTPELSLNGHLNFS*LHFPML Trigger: GAGCATAGGAAAGTGAAGCCAGCTGAAGTTCAGGTG...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 90 bp | CCACCCTTACTTGTGGGACCGAACACAAGTTATTCTCACAGTATCTaGTTGGTAAGTTGTGACCATCTGGGCACTGACAAAGAATGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PPLLVGPNTSYSHSI*LVSCDHLGTDKEWS Trigger: AGACCATTCTTTGTCAGTGCCCAGATGGTCACAACTTACCAACAAGATACTGTGAGAATAACTTGTGTTCGGTCCCACAAGTAAGGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTTTCCTGGGCCTTCGATaGGTCAGTGAGCATCTAACA | + |
|
Preference number: 2 (lower is better) Translates to: FLLLGPFAQVHSRELMEGFLGLR*VSEHLT Trigger: TGTTAGATGCTCACTGACCCATCGAAGGCCCAGGAA...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTCATGTCCCCGAGTCCTaGAGTACCTTTTTCAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FLLLGPFAQVHSRELMEGHVPES*STFFSL Trigger: CAGACTGAAAAAGGTACTCCAGGACTCGGGGACATG...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAACATGTCCCCGAGTCCTaGAGTACCTTTTTCAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ERTHWQSFMQNHPRTESEHVPES*STFFSL Trigger: CAGACTGAAAAAGGTACTCCAGGACTCGGGGACATG...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 90 bp | AATGTGGTCTCCCATGTGGCTGCAAACATCTCCTTCCATTTTCTTTaGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: NVVSHVAANISFHFL*LGPFAQVHSRELME Trigger: CTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAAATGGAAGGAGATGTTTGCAGCCACATGGGAGACCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTGCTCTCAAGAGCAAGTaGAGCATAAGGGATTCTACC | + |
|
Preference number: 2 (lower is better) Translates to: FLLLGPFAQVHSRELMEGALKSK*SIRDST Trigger: GGTAGAATCCCTTATGCTCCACTTGCTCTTGAGAGC...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCGAAGAGACCCCTGATTaGAAAACAGAACTCACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EHIGKALCKTTPELSLNGEETPD*KTELTD Trigger: ATCTGTGAGTTCTGTTTTCCAATCAGGGGTCTCTTC...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTAATAGTTGGGAAGGGTaGGATGCTGAAAACAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: FLLLGPFAQVHSRELMEGNSWEG*DAENRR Trigger: TCTCCTGTTTTCAGCATCTCACCCTTCCCAACTATT...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGGGGCTTGATTTTTGGAATGCTTAGCAGTGTGCCCTCTATTCTTTCCAAGGTCAACTCTTTCTTTTaGCTTTCTGAGCTGATATTT | + |
|
Preference number: 2 (lower is better) Translates to: ARGLIFGMLSSVPSILSKVNSFF*LSELIF Trigger: AAATATCAGCTCAGAAAGGCAAAAGAAAGAGTTGAC...CTTGGAAAGAATAGAGGGCACACTGCTAAGCATTCCAAAAATCAAGCCCCTGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATTTGCTTGGTCCATTTaGACAGGTTCATTCAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: ERTHWQSFMQNHPRTESEFAWSI*TGSFKG Trigger: TCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAA...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATCAGTTTGTAGCAAATaGCTAAACTGGTTTCTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: ERTHWQSFMQNHPRTESESVCSK*LNWFLH Trigger: ATGAAGAAACCAGTTTAGGCATTTGCTACAAACTGA...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | CCCGTCCCAGAGACGGTGCTGCTCTTTGCCTATAGCTaGTACTGCTGCTGTGGCCTGAAGGCACCAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: PVPETVLLFAYS*YCCCGLKAPTG Trigger: TCCTGTTGGTGCCTTCAGGCCACAGCAGCAGTAGCAGCTATAGGCAAAGAGCAGCACCGTCTCTGGGACGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | AGTGGAGAAGAGCAGGTGAGCTGCTGGGGCAGCCGCTaGGTTCTAGGTGCAGGCTTTCGCCACCTGTATAAG | + |
|
Preference number: 3 (lower is better) Translates to: SGEEQVSCWGSR*VLGAGFRHLYK Trigger: CTTATACAGGTGGCGAAAGCCTGCACCTAGAACCCAGCGGCTGCCCCAGCAGCTCACCTGCTCTTCTCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CAA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATGGTCACACACAGGCCTaGCCAGCATTTCTGGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: HDAVVSAPPACRGHPRRHGHTQA*PAFLEM Trigger: CATCTCCAGAAATGCTGGCAAGGCCTGTGTGTGACC...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | CCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTaGGGACAGAAGTTCCCCATGTCCCCGAGTCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PPVLFSQTPEGQ*GQKFPMSPSPG Trigger: TCCAGGACTCGGGGACATGGGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | ACAGGTGGCCTTGTGAGTCACATGTGGTCCAAGCTGTaGCCTGGCAGGCTGCTTTGTTGCCCTACCAACCGA | + |
|
Preference number: 3 (lower is better) Translates to: TGGLVSHMWSKL*PGRLLCCPTNR Trigger: TCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGACTCACAAGGCCACCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | GAAGGAGAGACCACAGGTGGCCTTGTGAGTCACATGTaGTCCAAGCTGTGCCCTGGCAGGCTGCTTTGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: EGETTGGLVSHM*SKLCPGRLLCC Trigger: GCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGACTCACAAGGCCACCTGTGGTCTCTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | GGCAATGCACCTACACTGCACTGGAACACGATGCTGTaGTCTCAGCACCACCTGCCTGCAGAGGACATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GNAPTLHWNTML*SQHHLPAEDIP Trigger: TGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTGTTCCAGTGCAGTGTAGGTGCATTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | GCCCCAGGCCTTAGATATAGGGAAGGGACCGCTTCCTaGCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: APGLRYREGTAS*HSSFAGELCSF Trigger: AAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCTTCCCTATATCTAAGGCCTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | ACAGCTAAGACTTGCGGATGCCCGTCCCAGAGACGGTaGTGCTCTTTGCCTATAGCTGCTACTGCTGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TAKTCGCPSQRR*CSLPIAATAAV Trigger: CACAGCAGCAGTAGCAGCTATAGGCAAAGAGCAGCACCGTCTCTGGGACGGGCATCCGCAAGTCTTAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | CTGGAACACGATGCTGTGGTCTCAGCACCACCTGCCTaGAGAGGACATCCCAGGCGACATCAAAGACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LEHDAVVSAPPA*RGHPRRHQRLE Trigger: TTCCAGTCTTTGATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTGTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | TGCACTGGAACACGATGCTGTGGTCTCAGCACCACCTaGCTGCAGAGGACATCCCAGGCGACATCAAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: CTGTRCCGLSTT*LQRTSQATSKT Trigger: AGTCTTTGATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTGTTCCAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | ATGTGGTCCAAGCTGTGCCCTGGCAGGCTGCTTTGTTaGCCTACCAACCGATACTTATTCCTGGGCCTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: MWSKLCPGRLLC*PTNRYLFLGLR Trigger: TCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | GAGACGGTGCTGCTCTTTGCCTATAGCTGCTACTGCTaGTGTGGCCTGAAGGCACCAACAGGAAGTGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ETVLLFAYSCYC*CGLKAPTGSAD Trigger: ATCTGCACTTCCTGTTGGTGCCTTCAGGCCACAGCAGCAGTAGCAGCTATAGGCAAAGAGCAGCACCGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | GACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATaGAGGGGCAACACTCTAGTGACCTCTGGCAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: DQSHVSALFSHP*RGNTLVTSGSL Trigger: CAGACTGCCAGAGGTCACTAGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | CTTCAGCTGGCTTCACTTTCCTATGCTCATTCTGTCTaGGGGGACGTGGTAGATGGTCACACACAGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LQLASLSYAHSV*GDVVDGHTQAL Trigger: CAAGGCCTGTGTGTGACCATCTACCACGTCCCCCCAGACAGAATGAGCATAGGAAAGTGAAGCCAGCTGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | GTAGCCAAGTGCCAAGGTTTTGCACATACACAGAGCTaGAGTTGTGCTTGGGGCCAGCAATGTGGTCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VAKCQGFAHTQS*SCAWGQQCGLP Trigger: TGGGAGACCACATTGCTGGCCCCAAGCACAACTCCAGCTCTGTGTATGTGCAAAACCTTGGCACTTGGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | GAACTGAGTCTGAATGGCAATGCACCTACACTGCACTaGAACACGATGCTGTGGTCTCAGCACCACCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: ELSLNGNAPTLH*NTMLWSQHHLP Trigger: AGGCAGGTGGTGCTGAGACCACAGCATCGTGTTCCAGTGCAGTGTAGGTGCATTGCCATTCAGACTCAGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | TCCTCTTTTCCCCTACTTCCGGATGGATGTGGGAGCTaGACTTCACTCTGTAAGCTGGGCAACCCGAGACTT | + |
|
Preference number: 3 (lower is better) Translates to: SSFPLLPDGCGS*TSLCKLGNPRL Trigger: AAGTCTCGGGTTGCCCAGCTTACAGAGTGAAGTTCAGCTCCCACATCCATCCGGAAGTAGGGGAAAAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CAA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATGTGAACGGAATGTACTaGGCTGTAATTACAGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: HDAVVSAPPACRGHPRRHVNGMY*AVITDC Trigger: ACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | GCGAAGAGAACAGATGGAGCAGGCTGTGTTCAGTTCTaGCAAACAGCCACCACTATCTACCCACCAGAATGC | + |
|
Preference number: 3 (lower is better) Translates to: AKRTDGAGCVQF*QTATTIYPPEC Trigger: GCATTCTGGTGGGTAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTCTTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | ACGATGGTGTGTTTCCAAGGACCAGAGTCATGTCAGTaGCCTGTTCTCTCATCCATGAAGGGGCAACACTCT | + |
|
Preference number: 3 (lower is better) Translates to: TMVCFQGPESCQ*PVLSSMKGQHS Trigger: AGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACACACCATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | ACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTaGAGCTTTATCTATTCTGCCACCAATAGCCTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TASCHSSFAGEL*SFIYSATNSLR Trigger: TCTCAGGCTATTGGTGGCAGAATAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | ATGCAAAACCACCCCAGAACTGAGTCTGAATGGCAATaGACCTACACTGCACTGGAACACGATGCTGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: MQNHPRTESEWQ*TYTALEHDAVV Trigger: GACCACAGCATCGTGTTCCAGTGCAGTGTAGGTGCATTGCCATTCAGACTCAGTTCTGGGGTGGTTTTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | TTCAAGGGAGTTAATGGAGGGTCGGGTGACAAACAGTaGGAAGTCAGGAATGGTCTCTCCCATCCCTCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: FKGVNGGSGDKQ*EVRNGLSHPSN Trigger: GTTAGAGGGATGGGAGAGACCATTCCTGACTTCCCACTGTTTGTCACCCGACCCTCCATTAACTCCCTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | CTAGTGATTCTGACAGCATGGCGGGGGATGACATGGTaGATGCTTTTAAAGCAACAAGGACAGGTGACTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LVILTAWRGMTW*MLLKQQGQVTP Trigger: GGGAGTCACCTGTCCTTGTTGCTTTAAAAGCATTCACCATGTCATCCCCCGCCATGCTGTCAGAATCACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | GTTCTGGCCGATGAAATGGAAGCAGTCAAGAAGCTTTaGGCAATTTCCTCTGATTGCTCGGGGTACGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VLADEMEAVKKL*AISSDCSGYGC Trigger: ACAGCCGTACCCCGAGCAATCAGAGGAAATTGCTCAAAGCTTCTTGACTGCTTCCATTTCATCGGCCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | TGCAGTTTCTCTTCTCCCCCTGTCACACGAGATAACTaGTTAGGGTTTCGACTTGTACTGTGCTGGCTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: CSFSSPPVTRDN*LGFRLVLCWLA Trigger: GGCAAGCCAGCACAGTACAAGTCGAAACCCTAATCAGTTATCTCGTGTGACAGGGGGAGAAGAGAAACTGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | CATGTCCCCGAGTCCTGGAGTACCTTTTTCAGTCTGTaGTCACCTGAACTTCAGCTGGCTTCACTTTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: HVPESWSTFFSL*SPELQLASLSY Trigger: ATAGGAAAGTGAAGCCAGCTGAAGTTCAGGTGAGCACAGACTGAAAAAGGTACTCCAGGACTCGGGGACATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | AAAAAGATAACAGTAGCTTCAAAGGAATGCTTGGCCTaGCTGCCCCAGGCCTTAGATATAGGGAAGGGACCG | + |
|
Preference number: 3 (lower is better) Translates to: KKITVASKECLA*LPQALDIGKGP Trigger: CGGTCCCTTCCCTATATCTAAGGCCTGGGGCAGGCAGGCCAAGCATTCCTTTGAAGCTACTGTTATCTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | GAGGCATCAAGAAAGATGTGTTCAGGGGCTTCAGTGTaGCTCAGCATCAGCATCCTTGCGAAGAGAACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EASRKMCSGASV*LSISILAKRTD Trigger: ATCTGTTCTCTTCGCAAGGATGCTGATGCTGAGGCACACTGAAGCCCCTGAACACATCTTTCTTGATGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | TCCAACCCCTTCAGCTCCTCTTGCAAGCTAAGGCTTTaGTGTACCCTGCGAATACTTACAATCGGATACGGT | + |
|
Preference number: 3 (lower is better) Translates to: SNPFSSSCKLRL*CTLRILTIGYG Trigger: ACCGTATCCGATTGTAAGTATTCGCAGGGTACAGCAAAGCCTTAGCTTGCAAGAGGAGCTGAAGGGGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | TGTTCAGGCCAGAACTCATTCTGCCAAGGCACAAAGTaGTGGAGGCCAGCTAACCCTGAAGAAATGAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: CSGQNSFCQGTK*WRPANPEEMKT Trigger: CGTTTTCATTTCTTCAGGGTTAGCTGGCCTCCATCACTTTGTGCCTTGGCAGAATGAGTTCTGGCCTGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | GCTTTACTGGAAGAGGTAGAGCAGGTACTGAGCCACTaGAAAGGGTGCCTTATGCTCAGTACTACTGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ALLEEVEQVLSH*KGCLMLSTTAV Trigger: TACTGCAGTAGTACTGAGCATAAGGCACCCTTTTCAGTGGCTCAGTACCTGCTCTACCTCTTCCAGTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | CGAGTCCTGGAGTACCTTTTTCAGTCTGTGCTCACCTaGACTTCAGCTGGCTTCACTTTCCTATGCTCATTC | + |
|
Preference number: 3 (lower is better) Translates to: RVLEYLFQSVLT*TSAGFTFLCSF Trigger: GAATGAGCATAGGAAAGTGAAGCCAGCTGAAGTTCAGGTGAGCACAGACTGAAAAAGGTACTCCAGGACTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCTaGCCGATGAAATGGAAGCAGTCAAGAAGCTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVCVCVF*PMKWKQSRSFE Trigger: CTCAAAGCTTCTTGACTGCTTCCATTTCATCGGCCAGAACACACACACACACACACACACACACACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | CAAATGAGGCCTCCCAAGTACGGTTTCCTTAGCCAGTaGTACCACACAGAGAGGGAGACCCTATTTCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QMRPPKYGFLSQ*YHTERETLFLK Trigger: TTTTAGAAATAGGGTCTCCCTCTCTGTGTGGTACCACTGGCTAAGGAAACCGTACTTGGGAGGCCTCATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | AGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATaGCAATGCACCTACACTGCACTGGAACACGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: SFMQNHPRTESE*QCTYTALEHDA Trigger: AGCATCGTGTTCCAGTGCAGTGTAGGTGCATTGCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTGGTCACACACAGGCCTaGCCAGCATTTCTGGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: FLLLGPFAQVHSRELMEGGHTQA*PAFLEM Trigger: CATCTCCAGAAATGCTGGCAAGGCCTGTGTGTGACC...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | ATGCCTACTTCTACTCCCAAGCACAAATCCCTCTGTTaGGATTCTCTCCTGGGTCCAAAAGACTCATCATCC | + |
|
Preference number: 3 (lower is better) Translates to: MPTSTPKHKSLC*DSLLGPKDSSS Trigger: GGATGATGAGTCTTTTGGACCCAGGAGAGAATCTCAACAGAGGGATTTGTGCTTGGGAGTAGAAGTAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | TCTGTCTCTGGTGTGCTGTTAGGCCACCCTTACTTGTaGGACCGAACACAAGTTATTCTCACAGTATCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SVSGVLLGHPYL*DRTQVILTVSC Trigger: ACAAGATACTGTGAGAATAACTTGTGTTCGGTCCCACAAGTAAGGGTGGCCTAACAGCACACCAGAGACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | GTGTGTGTGTGTGTGTGTGTGTTCTGGCCGATGAAATaGAAGCAGTCAAGAAGCTTTGAGCAATTTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVCVFWPMK*KQSRSFEQFPL Trigger: CAGAGGAAATTGCTCAAAGCTTCTTGACTGCTTCCATTTCATCGGCCAGAACACACACACACACACACACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | GCTAAGCTTATTTTTCCCCCGTGTAAGAAACTGACCTaGGATGCTAAAGGAACATCCCATCAGTGGGAGACA | + |
|
Preference number: 3 (lower is better) Translates to: AKLIFPPCKKLT*DAKGTSHQWET Trigger: TGTCTCCCACTGATGGGATGTTCCTTTAGCATCTCAGGTCAGTTTCTTACACGGGGGAAAAATAAGCTTAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | CAACTTAGTCATAATAGCAATTTATTCTTACTCCCCTaGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: QLSHNSNLFLLP*VCPVNGMYLAV Trigger: TACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATGACTAAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTATATTCTCACAGTATCTaGTTGGTAAGTTGTGACCAT | + |
|
Preference number: 3 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLYSHSI*LVSCDH Trigger: ATGGTCACAACTTACCAACAAGATACTGTGAGAATA...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR GCA 72 bp | AGTCATAATAGCAATTTATTCTTACTCCCCTGGGTGTaGCCCGTGAACGGAATGTACTTGGCTGTAATTACA | + |
|
Preference number: 3 (lower is better) Translates to: SHNSNLFLLPWV*PVNGMYLAVIT Trigger: TGTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | AAAACGTTAATACTCTTAGACAACACAGATCTGAAATaGCGAAACCAGCAATACCCCCTCCCACCTTACAAC | + |
|
Preference number: 3 (lower is better) Translates to: KTLILLDNTDLK*RNQQYPLPPYN Trigger: GTTGTAAGGTGGGAGGGGGTATTGCTGGTTTCGCCATTTCAGATCTGTGTTGTCTAAGAGTATTAACGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCAGGCTGTAATTACAGATaGTTTTGTCCAACACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAGCNYR*FCPTQT Trigger: TGTCTGTGTTGGACAAAACAATCTGTAATTACAGCC...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CCA 72 bp | GCACTGACAAAGAATGGTCTACAAACAGAAACCAAATaGTATCATGTAATAATAGTTGGGAAGGGTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: ALTKNGLQTETK*YHVIIVGKGEM Trigger: CATCTCACCCTTCCCAACTATTATTACATGATACCATTTGGTTTCTGTTTGTAGACCATTCTTTGTCAGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR TCA 72 bp | TTGCTGTACCCTGCGAATACTTACAATCGGATACGGTaGAATATACAACAACCATTAACATCTCTCTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLYPANTYNRIR*NIQQPLTSLSF Trigger: AAAAGAGAGAGATGTTAATGGTTGTTGTATATTTCACCGTATCCGATTGTAAGTATTCGCAGGGTACAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGCAACACTCTAGTGACCTCTGGCAGTCTGAGAACCCCAGCCTGGGCCTCCTGTCGTCCTTTTGGTTaGGTGGTTGATGGCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGNTLVTSGSLRTPAWASCRPFG*VVDGKS Trigger: GGACTTGCCATCAACCACCCAACCAAAAGGACGACA...GGAGGCCCAGGCTGGGGTTCTCAGACTGCCAGAGGTCACTAGAGTGTTGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLPQDLQ*LRLHVQ Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGG...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATCCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFVALPTDTYSWAFDPQDLQ*LRLHVQ Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGG...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATCAAACCAAGTACAGCTaGCCTGCTGCTCTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HDAVVSAPPACRGHPRRHQTKYS*PAALVW Trigger: CCAAACAAGAGCAGCAGGCCAGCTGTACTTGGTTTG...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGACTGGGACCCACTGTaGGGCTGTGCACACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ADTRPITKRLFPRRRWLPDWDPL*GCAHKL Trigger: GAGCTTGTGTGCACAGCCCCACAGTGGGTCCCAGTC...TGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| 3UTR CAA 72 bp | CATGTGGTCCAAGCTGTGCCCTGGCAGGCTGCTTTGTaGCCCTACCAACCGATACTTATTCCTGGGCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HVVQAVPWQAAL*PYQPILIPGPS Trigger: CGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTATCTGGGGCCATAAAGTaGGGTGTTCCAACGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLSGAIK*GVPTRP Trigger: AGGCCGCGTTGGAACACCTCACTTTATGGCCCCAGA...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAAAGGCTGTCCAGCACCTaGGAGACGGCTCCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQRLSST*ETAPEE Trigger: CTCCTCAGGAGCCGTCTCTCAGGTGCTGGACAGCCT...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGGGGCAACACTCTAGTGACCTCTGGCAGTCTGAGAACCCCAGCCTGGGCCTCCGTTCAGGAGAAGGAATaGGACCTGCAGTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGNTLVTSGSLRTPAWASVQEKE*DLQFHF Trigger: AAAATGGAACTGCAGGTCTCATTCCTTCTCCTGAAC...GGAGGCCCAGGCTGGGGTTCTCAGACTGCCAGAGGTCACTAGAGTGTTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCCACTGTGGGGCTGTaGACACAAGCTCGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLPTVGL*TQARQL Trigger: AAGCTGTCGAGCTTGTGTGCACAGCCCCACAGTGGG...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGTGACTGGGACCCACTGTaGGGCTGTGCACACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLCCPTNRYLFLGLRWVSDWDPL*GCAHKL Trigger: GAGCTTGTGTGCACAGCCCCACAGTGGGTCCCAGTC...ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 72 bp | TCACATGTGGTCCAAGCTGTGCCCTGGCAGGCTGCTTaGTTGCCCTACCAACCGATACTTATTCCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHVVQAVPWQAA*LPYQPILIPGP Trigger: AGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAGGGCACAGCTTGGACCACATGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCGCTACTCGCCATTCCTaGAGTTCAGGAGAAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: ATSALLSDSRRPVRTEVPATRHS*SSGEGM Trigger: CATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGC...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGCCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEPQDLQ*LRLHVQ Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGG...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATTGTGCATATGTTCTCTaGAAGACATCGGACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HDAVVSAPPACRGHPRRHCAYVL*KTSDSF Trigger: GAAGGAGTCCGATGTCTTGCAGAGAACATATGCACA...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGGACTGGGACCCACTGTaGGGCTGTGCACACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEDWDPL*GCAHKL Trigger: GAGCTTGTGTGCACAGCCCCACAGTGGGTCCCAGTC...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| 3UTR CAA 72 bp | CCAAGGTTTTGCACATACACAGAGCTGGAGTTGTGCTaGGGGCCAGCAATGTGGTCTCCCATGTGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRFCTYTELELC*GPAMWSPMWLQ Trigger: TTGCAGCCACATGGGAGACCACATTGCTGGCCCCAAGCACAACTCCAGCTCTGTGTATGTGCAAAACCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 72 bp | CAAGTGCCAAGGTTTTGCACATACACAGAGCTGGAGTaGTGCTTGGGGCCAGCAATGTGGTCTCCCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QVPRFCTYTELE*CLGPAMWSPMW Trigger: CCACATGGGAGACCACATTGCTGGCCCCAAGCACAACTCCAGCTCTGTGTATGTGCAAAACCTTGGCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGGCCCAGTTTCTCTGTTaGTACATCGCCGTACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GFRLVLCWLATTLVVVQVAQFLC*YIAVQH Trigger: GTGTTGTACGGCGATGTATCAACAGAGAAACTGGGC...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 |
||
| CDS-3UTR TCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGGGATGCTTCAGCATATaGCAGATACTGGCTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWGCFSI*QILASR Trigger: GCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCC...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAAGGCTGTCCAGCACCTaGGAGACGGCTCCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSRLSST*ETAPEE Trigger: CTCCTCAGGAGCCGTCTCTCAGGTGCTGGACAGCCT...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAAGGCTGTCCAGCACCTaGGAGACGGCTCCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGERLSST*ETAPEE Trigger: CTCCTCAGGAGCCGTCTCTCAGGTGCTGGACAGCCT...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATTCATACCCCCATGCATaGTTCTTGCGACAATACAAT | + |
|
Preference number: 4 (lower is better) Translates to: HDAVVSAPPACRGHPRRHSYPHA*FLRQYN Trigger: ATTGTATTGTCGCAAGAATCATGCATGGGGGTATGA...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCACTTCTTTGCAGGGGATaGGGTCATCCTTGGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ADTRPITKRLFPRRRWLPLLCRG*GHPWLD Trigger: ATCCAGCCAAGGATGACCTCATCCCCTGCAAAGAAG...TGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCTTTTCCAGTTTACCCTaGCACCAGTTGTGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ATSALLSDSRRPVRTEVPFSSLP*HQLWSS Trigger: GGATGACCACAACTGGTGGCAGGGTAAACTGGAAAA...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACCCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPITKRLFPRRRWLPVLYPQDLQ*LRLHVQ Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGG...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTGGGACTGTCTGGAAGTaGAGGGGGAATCTCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVGTVWK*RGNLSH Trigger: GTGAGAGAGATTCCCCCTCCACTTCCAGACAGTCCC...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033321.11 ENSMUST00000115438.10 |
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| CDS-3UTR TCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATCTGGGGCCATAAAGTaGGGTGTTCCAACGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLSGAIK*GVPTRP Trigger: AGGCCGCGTTGGAACACCTCACTTTATGGCCCCAGA...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTCAGTCTGTAAGTGCGTaGATCTCTTCCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVQSVSA*ISSRLS Trigger: GGACAGCCTGGAAGAGATTCACGCACTTACAGACTG...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTCTTCTTTGCAGGGGATaGGGTCATCCTTGGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVLLCRG*GHPWLD Trigger: ATCCAGCCAAGGATGACCTCATCCCCTGCAAAGAAG...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTAGCAAACCGGTCCGGGTaGTTTGTGATGAGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLANRSG*FVMRVF Trigger: AAATACCCTCATCACAAAGCACCCGGACCGGTTTGC...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCTTGCATCCTCATGGCTaGCATACTCCAAGTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ATSALLSDSRRPVRTEVPLHPHG*HTPSIR Trigger: ACGAATACTTGGAGTATGGCAGCCATGAGGATGCAA...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAACCTCAGGACCTTCAGTaGCTGAGGCTCCACGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGEPQDLQ*LRLHVQ Trigger: CTGGACGTGGAGCCTCAGGCACTGAAGGTCCTGAGG...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGACCCACTGTGGGGCTGTaGACACAAGCTCGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGPTVGL*TQARQL Trigger: AAGCTGTCGAGCTTGTGTGCACAGCCCCACAGTGGG...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGCCCACTGTGGGGCTGTaGACACAAGCTCGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKPTVGL*TQARQL Trigger: AAGCTGTCGAGCTTGTGTGCACAGCCCCACAGTGGG...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACCCCACTGTGGGGCTGTaGACACAAGCTCGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RPITKRLFPRRRWLPVLYPTVGL*TQARQL Trigger: AAGCTGTCGAGCTTGTGTGCACAGCCCCACAGTGGG...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGATTCTCCTAACTGAATaGCCACCCCAAAGCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWILLTE*PPQSPQ Trigger: TTGGGGGCTTTGGGGTGGCCATTCAGTTAGGAGAAT...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCCTGTACTGCATCACTTaGAGGATTCCTGATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATSALLSDSRRPVRTEVPLYCIT*RIPDLW Trigger: CCACAAATCAGGAATCCTCCAAGTGATGCAGTACAG...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTGTTCTCTCATCCATGAAGGGGCAACACTCTAGTGACCTCTGGCAGTCTGTTTGGTCTTCTCCATaGCAATGCAAGCTACTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CPVLSSMKGQHSSDLWQSVWSSP*QCKLLA Trigger: GGCGAGTAGCTTGCATTGCCATGGAGAAGACCAAAC...AGACTGCCAGAGGTCACTAGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCATCAGCCCCTGCTCATaGATTTTCCGAATGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLISPCS*IFRMVS Trigger: GGAGACCATTCGGAAAATCCATGAGCAGGGGCTGAT...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGGACTGGGACCCACTGTaGGGCTGTGCACACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKDWDPL*GCAHKL Trigger: GAGCTTGTGTGCACAGCCCCACAGTGGGTCCCAGTC...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCGACTGGGACCCACTGTaGGGCTGTGCACACAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGKGEMLKTGEEYEHKNADWDPL*GCAHKL Trigger: GAGCTTGTGTGCACAGCCCCACAGTGGGTCCCAGTC...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCGTCCTTTTGGTTGGGTaGTTGATGGCAAGTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLVLLVG*LMASPH Trigger: GTGAGGACTTGCCATCAACCACCCAACCAAAAGGAC...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTATGCCGAGTTTTCTTTTaGGGCAAGGAGAACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLCRVFF*GKENTV Trigger: CACTGTGTTCTCCTTGCCTCAAAAGAAAACTCGGCA...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGTCTGGGGCCATAAAGTaGGGTGTTCCAACGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKSGAIK*GVPTRP Trigger: AGGCCGCGTTGGAACACCTCACTTTATGGCCCCAGA...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTACACTTGGAGGATTCCTaGTTTGTGGCGAAGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLHLEDS*FVAKTL Trigger: CAAAGTCTTCGCCACAAATCAGGAATCCTCCAAGTG...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGTCGGGGGAGGTGTaGCCCTTAATGCTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEKSGEV*PLMLHH Trigger: GTGATGAAGCATTAAGGGTCACACCTCCCCCGACTT...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCTCCTTCTGCAGGCGCTaGAGAGATTCATCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLSFCRR*RDSSSF Trigger: AAATGAGGATGAATCTCTTCAGCGCCTGCAGAAGGA...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTATCCTTCTGCAGGCGCTaGAGAGATTCATCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLSFCRR*RDSSSF Trigger: AAATGAGGATGAATCTCTTCAGCGCCTGCAGAAGGA...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTTTGGTTGGGTGGTTaGTGGCAAGTCCTCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVFWLGG*WQVLTG Trigger: TCCTGTGAGGACTTGCCATCAACCACCCAACCAAAA...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCCCATGGGTGATTCAGTaGTTCATAAACAGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATSALLSDSRRPVRTEVPPWVIQ*FINSDP Trigger: AGGATCACTGTTTATGAAGCACTGAATCACCCATGG...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTATTTTCCAGTTTACCCTaGCACCAGTTGTGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLFSSLP*HQLWSS Trigger: GGATGACCACAACTGGTGGCAGGGTAAACTGGAAAA...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGATCGCAATCAGCCCCTaGTCATGGATTTTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWIAISP*SWIFRM Trigger: CATTCGGAAAATCCATGAGCAGGGGCTGATTGCGAT...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCAAAAGGAGCAAACTCTaGAGTCCTCAGGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLKRSKL*SPQDLQ Trigger: CTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTT...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATAAAAGGAGCAAACTCTaGAGTCCTCAGGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFVALPTDTYSWAFDKRSKL*SPQDLQ Trigger: CTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTT...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | GCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAAAAAGGAGCAAACTCTaGAGTCCTCAGGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADTRPITKRLFPRRRWLPKRSKL*SPQDLQ Trigger: CTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTT...TGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAACCCACTGTGGGGCTGTaGACACAAGCTCGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQPTVGL*TQARQL Trigger: AAGCTGTCGAGCTTGTGTGCACAGCCCCACAGTGGG...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCTCTCTTGACCACTTCTaGGGCCATAAAGTGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLSLDHF*GHKVRC Trigger: ACACCTCACTTTATGGCCCCAGAAGTGGTCAAGAGA...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTGTTCTCTCATCCATGAAGGGGCAACACTCTAGTGACCTCTGGCAGTCTGGCGTACTAGGTCTTTaGCACTTTCAGAGATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPVLSSMKGQHSSDLWQSGVLGL*HFQRYG Trigger: GCCATATCTCTGAAAGTGCCAAAGACCTAGTACGCC...AGACTGCCAGAGGTCACTAGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCCGCTCCTTAAGCCATaGGTGATTCAGTGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWPLLKP*VIQCFI Trigger: TATGAAGCACTGAATCACCCATGGCTTAAGGAGCGG...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGTGTCGTCCTTTTGGTTaGGTGGTTGATGGCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGCRPFG*VVDGKS Trigger: GGACTTGCCATCAACCACCCAACCAAAAGGACGACA...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CAA 72 bp | GATATAGGGAAGGGACCGCTTCCTGCCACTCTTCCTTaGCTGGGGAACTCTGCAGCTTTATCTATTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DIGKGPLPATLP*LGNSAALSILP Trigger: TGGCAGAATAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCTTCCCTATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCACCCTGGACTTGATGTaGACTTGGCTACATCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLTLDLM*TWLHQQ Trigger: TTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGT...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGGATGCTTCAGCATATaGCAGATACTGGCTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGGCFSI*QILASR Trigger: GCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCC...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGGTAAAGCATCCCATCTaGGCTATATGTCTCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWVKHPI*AICLQQ Trigger: CTGTTGGAGACATATAGCTCAGATGGGATGCTTTAC...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTAGTAAAGCATCCCATCTaGGCTATATGTCTCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLVKHPI*AICLQQ Trigger: CTGTTGGAGACATATAGCTCAGATGGGATGCTTTAC...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCTGTTCTCTCATCCATGAAGGGGCAACACTCTAGTGACCTCTGGCAGTCTGTAAAGCATCCCATCTaGGCTATATGTCTCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CPVLSSMKGQHSSDLWQSVKHPI*AICLQQ Trigger: CTGTTGGAGACATATAGCTCAGATGGGATGCTTTAC...AGACTGCCAGAGGTCACTAGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGTGCTTCATAAACAGTaGTCCTTTCAGCAGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFVALPTDTYSWAFDVLHKQ*SFQQDP Trigger: TGGATCCTGCTGAAAGGATCACTGTTTATGAAGCAC...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACCAGTCTGTAAGTGCGTaGATCTCTTCCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPITKRLFPRRRWLPVLYQSVSA*ISSRLS Trigger: GGACAGCCTGGAAGAGATTCACGCACTTACAGACTG...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTCACTTGGAGGATTCCTaGTTTGTGGCGAAGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVHLEDS*FVAKTL Trigger: CAAAGTCTTCGCCACAAATCAGGAATCCTCCAAGTG...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAAAGTGTACCTTGCCTGTaGATCATACCCCCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQSVPCL*IIPPCM Trigger: CATGCATGGGGGTATGATTCACAGGCAAGGTACACT...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTGTTAGTGCTGCTATaGCCATTAGCAGGGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVLLVLL*PLAGDC Trigger: ACAGTCCCCTGCTAATGGTCATAGCAGCACTAACAA...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033321.11 ENSMUST00000115438.10 |
||
| CDS-3UTR TCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAAGCTACTCGCCATTCCTaGAGTTCAGGAGAAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQATRHS*SSGEGM Trigger: CATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGC...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGTCCTTCTGCAGGCGCTaGAGAGATTCATCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGSFCRR*RDSSSF Trigger: AAATGAGGATGAATCTCTTCAGCGCCTGCAGAAGGA...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGTCCTTCTGCAGGCGCTaGAGAGATTCATCAGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKESFCRR*RDSSGN Trigger: ATTGCCTGATGAATCTCTTCAGCGCCTGCAGAAGGA...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000128095.3 |
||
| CDS-3UTR GCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTTTCCAGTTTACCCTaGCACCAGTTGTGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVFSSLP*HQLWSS Trigger: GGATGACCACAACTGGTGGCAGGGTAAACTGGAAAA...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGACTGCTTCTTTTTCTTaGCAAACCAAGTACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFRLVLCWLATTLVVVQVTASFS*QTKYSW Trigger: CCAGCTGTACTTGGTTTGGCAAGAAAAAGAAGCAGT...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGGCACTTTCAGAGATATaGCTCCACTGCCTTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGALSEI*LHCLGF Trigger: GAATCCAAGGCAGTGGAGCCATATCTCTGAAAGTGC...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATCTTCCAATACCTCTTTaGCTCTCTGTACTGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFVALPTDTYSWAFDLPIPL*LSVLHH Trigger: GTGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAG...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACGTACCAGCCGAACTCTaGTCACATTCTCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILTPLGVPRERNVLGCNYVPAEL*SHSPCP Trigger: TGGACATGGAGAATGTGACCAGAGTTCGGCTGGTAC...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAAGTACCAGCCGAACTCTaGTCACATTCTCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQVPAEL*SHSPCP Trigger: TGGACATGGAGAATGTGACCAGAGTTCGGCTGGTAC...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWLSAVA*HNLEGN Trigger: ATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAG...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTGTTCTCTCATCCATGAAGGGGCAACACTCTAGTGACCTCTGGCAGTCTCTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: CPVLSSMKGQHSSDLWQSLSAVA*HNLEGN Trigger: ATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAG...AGACTGCCAGAGGTCACTAGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGGGGACTGTCTGGAAGTaGAGGGGGAATCTCTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKGTVWK*RGNLSH Trigger: GTGAGAGAGATTCCCCCTCCACTTCCAGACAGTCCC...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000033321.11 ENSMUST00000115438.10 |
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| CDS-3UTR CCA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCTCCTTACTAATAATCTaGATGATGTCACCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ATSALLSDSRRPVRTEVPSLLII*MMSPTR Trigger: CCGAGTTGGTGACATCATCCAGATTATTAGTAAGGA...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGCAAACCAAGTACAGCTaGCCTGCTGCTCTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEQTKYS*PAALVW Trigger: CCAAACAAGAGCAGCAGGCCAGCTGTACTTGGTTTG...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAACAAACCAAGTACAGCTaGCCTGCTGCTCTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQQTKYS*PAALVW Trigger: CCAAACAAGAGCAGCAGGCCAGCTGTACTTGGTTTG...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCATGGATTTTCCGAATaGTCTCCAGTTTTGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWHGFSE*SPVLSR Trigger: ACGGGACAAAACTGGAGACCATTCGGAAAATCCATG...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGGTCCTTTTGGTTGGGTaGTTGATGGCAAGTCCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGVLLVG*LMASPK Trigger: TTTCGGACTTGCCATCAACCACCCAACCAAAAGGAC...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115438.10 |
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| 3UTR CAA 72 bp | TTCCAACCCCTTCAGCTCCTCTTGCAAGCTAAGGCTTaGCTGTACCCTGCGAATACTTACAATCGGATACGG | + |
|
Preference number: 4 (lower is better) Translates to: FQPLQLLLQAKA*LYPANTYNRIR Trigger: CCGTATCCGATTGTAAGTATTCGCAGGGTACAGCAAAGCCTTAGCTTGCAAGAGGAGCTGAAGGGGTTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTAGCCCAGTTTCTCTGTTaGTACATCGCCGTACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLAQFLC*YIAVQH Trigger: GTGTTGTACGGCGATGTATCAACAGAGAAACTGGGC...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 |
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| CDS-3UTR TCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCGGATGCTTCAGCATATaGCAGATACTGGCTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EHIGKALCKTTPELSLNGGCFSI*QILASR Trigger: GCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCC...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTTCTGGGGCCATAAAGTaGGGTGTTCCAACGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGSGAIK*GVPTRP Trigger: AGGCCGCGTTGGAACACCTCACTTTATGGCCCCAGA...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAGTCTGTAAGTGCGTaGATCTCTTCCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSQSVSA*ISSRLS Trigger: GGACAGCCTGGAAGAGATTCACGCACTTACAGACTG...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAACACTTGGAGGATTCCTaGTTTGTGGCGAAGACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQHLEDS*FVAKTL Trigger: CAAAGTCTTCGCCACAAATCAGGAATCCTCCAAGTG...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAAAGTCGGGGGAGGTGTaGCCCTTAATGCTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGEKSGEV*PLMLHH Trigger: GTGATGAAGCATTAAGGGTCACACCTCCCCCGACTT...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCAAGTCGGGGGAGGTGTaGCCCTTAATGCTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EHIGKALCKTTPELSLNGKSGEV*PLMLHH Trigger: GTGATGAAGCATTAAGGGTCACACCTCCCCCGACTT...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGAAGTCGGGGGAGGTGTaGCCCTTAATGCTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKKSGEV*PLMLHH Trigger: GTGATGAAGCATTAAGGGTCACACCTCCCCCGACTT...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCATTCATTTTCAAAGTaGTTCCCATTGGCTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWHSFSK*FPLAHP Trigger: CGGATGAGCCAATGGGAATCACTTTGAAAATGAATG...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGAGTGTACCTTGCCTGTaGATCATACCCCCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKSVPCL*IIPPCM Trigger: CATGCATGGGGGTATGATTCACAGGCAAGGTACACT...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACAGTGTACCTTGCCTGTaGATCATACCCCCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RPITKRLFPRRRWLPVLYSVPCL*IIPPCM Trigger: CATGCATGGGGGTATGATTCACAGGCAAGGTACACT...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACCTTCTTTGCAGGGGATaGGGTCATCCTTGGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYLLCRG*GHPWLD Trigger: ATCCAGCCAAGGATGACCTCATCCCCTGCAAAGAAG...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCCTTCTTTGCAGGGGATaGGGTCATCCTTGGCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EHIGKALCKTTPELSLNGLLCRG*GHPWLD Trigger: ATCCAGCCAAGGATGACCTCATCCCCTGCAAAGAAG...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCGTGACAAGATCTAATTaGTCAAACACTGCGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLVTRSN*SNTALC Trigger: GCACAACGCAGTGTTTGATCAATTAGATCTTGTCAC...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCGATCCAGCATCAGCATaGGGCGTACTAGGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSDPASA*GVLGLW Trigger: CCAAAGACCTAGTACGCCGCATGCTGATGCTGGATC...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGCAAACCGGTCCGGGTaGTTTGTGATGAGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGANRSG*FVMRVF Trigger: AAATACCCTCATCACAAAGCACCCGGACCGGTTTGC...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTAGCAAACCGGTCCGGGTaGTTTGTGATGAGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLANRSG*FVMRVF Trigger: AAATACCCTCATCACAAAGCACCCGGACCGGTTTGC...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTAGCAAACCGGTCCGGGTaGTTTGTGATGAGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLANRSG*FVMRVF Trigger: AAATACCCTCATCACAAAGCACCCGGACCGGTTTGC...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTGCATCCTCATGGCTaGCATACTCCAAGTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVLHPHG*HTPSIR Trigger: ACGAATACTTGGAGTATGGCAGCCATGAGGATGCAA...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACATCGCAATCAGCCCCTaGTCATGGATTTTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: ILTPLGVPRERNVLGCNYIAISP*SWIFRM Trigger: CATTCGGAAAATCCATGAGCAGGGGCTGATTGCGAT...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGATCGCAATCAGCCCCTaGTCATGGATTTTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEIAISP*SWIFRM Trigger: CATTCGGAAAATCCATGAGCAGGGGCTGATTGCGAT...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAATCTCTTGACCACTTCTaGGGCCATAAAGTGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQSLDHF*GHKVRC Trigger: ACACCTCACTTTATGGCCCCAGAAGTGGTCAAGAGA...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGGGCGTACTAGGTCTTTaGCACTTTCAGAGATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEGVLGL*HFQRYG Trigger: GCCATATCTCTGAAAGTGCCAAAGACCTAGTACGCC...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTAGTCTTCGGAGAAATCTaGCAACTCTTCAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLVFGEI*QLFRRV Trigger: GACCCTCCTGAAGAGTTGCCAGATTTCTCCGAAGAC...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGCTTCCAATACCTCTTTaGCTCTCTGTACTGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGLPIPL*LSVLHH Trigger: GTGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAG...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGTTCATCCGTGTTCTTTTaGAACTGTACCAGCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LLCCPTNRYLFLGLRWVSSSVFF*NCTSRT Trigger: AGTTCGGCTGGTACAGTTCCAAAAGAACACGGATGA...ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGTTTGGTCTTCTCCATaGCAATGCAAGCTACTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGVWSSP*QCKLLA Trigger: GGCGAGTAGCTTGCATTGCCATGGAGAAGACCAAAC...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACAGGTCTGGTTGTATGTaGAATAGGGTACGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ILTPLGVPRERNVLGCNYRSGCM*NRVRKP Trigger: CGGTTTGCGTACCCTATTCCACATACAACCAGACCT...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCTACATTGCATCCTCATaGCTGCCATACTCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLYIASS*LPYSKY Trigger: ATACTTGGAGTATGGCAGCCATGAGGATGCAATGTA...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGTACATTGCATCCTCATaGCTGCCATACTCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWYIASS*LPYSKY Trigger: ATACTTGGAGTATGGCAGCCATGAGGATGCAATGTA...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAATCAGCCCCTGCTCATaGATTTTCCGAATGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGISPCS*IFRMVS Trigger: GGAGACCATTCGGAAAATCCATGAGCAGGGGCTGAT...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTGTCGTCCTTTTGGTTaGGTGGTTGATGGCAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPITKRLFPRRRWLPVLYCRPFG*VVDGKS Trigger: GGACTTGCCATCAACCACCCAACCAAAAGGACGACA...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 72 bp | GAGTCTGTCTCTGGTGTGCTGTTAGGCCACCCTTACTaGTGGGACCGAACACAAGTTATTCTCACAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: ESVSGVLLGHPY*WDRTQVILTVS Trigger: AGATACTGTGAGAATAACTTGTGTTCGGTCCCACAAGTAAGGGTGGCCTAACAGCACACCAGAGACAGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTATGCCGAGTTTTCTTTTaGGGCAAGGAGAACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLCRVFF*GKENTV Trigger: CACTGTGTTCTCCTTGCCTCAAAAGAAAACTCGGCA...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTAAAGGAATTGAATTTGTaGCTTGACACAGCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLKELNL*LDTAAS Trigger: ACTAGCTGCTGTGTCAAGTCACAAATTCAATTCCTT...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATAGTAAGGCCATGAAATaGGGTTGTGTTAAAATACGC | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFVALPTDTYSWAFDSKAMK*GCVKIR Trigger: GCGTATTTTAACACAACCTCATTTCATGGCCTTACT...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAAGTGTACCTTGCCTGTaGATCATACCCCCATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQSVPCL*IIPPCM Trigger: CATGCATGGGGGTATGATTCACAGGCAAGGTACACT...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGATTGTTAGTGCTGCTATaGCCATTAGCAGGGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGLLVLL*PLAGDC Trigger: ACAGTCCCCTGCTAATGGTCATAGCAGCACTAACAA...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033321.11 ENSMUST00000115438.10 |
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| CDS-3UTR TCA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACGTTCAGGAGAAGGAATaGGACCTGCAGTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILTPLGVPRERNVLGCNYVQEKE*DLQFHF Trigger: AAAATGGAACTGCAGGTCTCATTCCTTCTCCTGAAC...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGCTACTCGCCATTCCTaGAGTTCAGGAGAAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGEATRHS*SSGEGM Trigger: CATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGC...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTGTGACAAGATCTAATTaGTCAAACACTGCGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVVTRSN*SNTALC Trigger: GCACAACGCAGTGTTTGATCAATTAGATCTTGTCAC...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGTCCTTCTGCAGGCGCTaGAGAGATTCATCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKSFCRR*RDSSSF Trigger: AAATGAGGATGAATCTCTTCAGCGCCTGCAGAAGGA...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAATTTTGGTTGGGTGGTTaGTGGCAAGTCCTCACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGEFWLGG*WQVLTG Trigger: TCCTGTGAGGACTTGCCATCAACCACCCAACCAAAA...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGTTTTGGTTGGGTGGTTaGTGGCAAGTCCGAAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKFWLGG*WQVRNR Trigger: TCTGTTTCGGACTTGCCATCAACCACCCAACCAAAA...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115438.10 |
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| CDS-3UTR GCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTCCATGGGTGATTCAGTaGTTCATAAACAGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVPWVIQ*FINSDP Trigger: AGGATCACTGTTTATGAAGCACTGAATCACCCATGG...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGTTTGGCTCTCTGTACTaGATCACTTGGAGGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEFGSLY*ITWRIP Trigger: AGGAATCCTCCAAGTGATGCAGTACAGAGAGCCAAA...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAAGGACGAAGACTGAGTaGGGTAGCTTGGCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSRTKTE*GSLAQS Trigger: AGATTGTGCCAAGCTACCGCACTCAGTCTTCGTCCT...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTAAAAAGGAGCAAACTCTaGAGTCCTCAGGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLKRSKL*SPQDLQ Trigger: CTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTT...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAAAAAGGAGCAAACTCTaGAGTCCTCAGGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGKRSKL*SPQDLQ Trigger: CTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTT...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCACCCACTGTGGGGCTGTaGACACAAGCTCGACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAPTVGL*TQARQL Trigger: AAGCTGTCGAGCTTGTGTGCACAGCCCCACAGTGGG...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTGCATATGACAGATACTaGCTTCCCGCTTTAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVAYDRY*LPALDL Trigger: AAGATCTAAAGCGGGAAGCCAGTATCTGTCATATGC...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTCAGCTCTACAATGTGTaGATGCTTCAGCATATGACA | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVQLYNV*MLQHMT Trigger: TGTCATATGCTGAAGCATCCACACATTGTAGAGCTG...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACATTCTCCTAACTGAATaGCCACCCCAAAGCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYILLTE*PPQSPQ Trigger: TTGGGGGCTTTGGGGTGGCCATTCAGTTAGGAGAAT...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCTCTTGACCACTTCTaGGGCCATAAAGTGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPITKRLFPRRRWLPVLYSLDHF*GHKVRC Trigger: ACACCTCACTTTATGGCCCCAGAAGTGGTCAAGAGA...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATATGGCTCCACTGCCTTaGATTCATCTTATATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFVALPTDTYSWAFDMAPLP*IHLIFS Trigger: GGAAAATATAAGATGAATCCAAGGCAGTGGAGCCAT...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTAGCACTTTCAGAGATATaGCTCCACTGCCTTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLALSEI*LHCLGF Trigger: GAATCCAAGGCAGTGGAGCCATATCTCTGAAAGTGC...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTACCGCTCCTTAAGCCATaGGTGATTCAGTGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLPLLKP*VIQCFI Trigger: TATGAAGCACTGAATCACCCATGGCTTAAGGAGCGG...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGTCTTCGGAGAAATCTaGCAACTCTTCAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSVFGEI*QLFRRV Trigger: GACCCTCCTGAAGAGTTGCCAGATTTCTCCGAAGAC...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACGTCTTCGGAGAAATCTaGCAACTCTTCAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYVFGEI*QLFRRV Trigger: GACCCTCCTGAAGAGTTGCCAGATTTCTCCGAAGAC...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCGTCTTCGGAGAAATCTaGCAACTCTTCAGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSVFGEI*QLFRRV Trigger: GACCCTCCTGAAGAGTTGCCAGATTTCTCCGAAGAC...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACGTACCAGCCGAACTCTaGTCACATTCTCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYVPAEL*SHSPCP Trigger: TGGACATGGAGAATGTGACCAGAGTTCGGCTGGTAC...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCGTACCAGCCGAACTCTaGTCACATTCTCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSVPAEL*SHSPCP Trigger: TGGACATGGAGAATGTGACCAGAGTTCGGCTGGTAC...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTCAAAGTGATTCCCATTaGCTCATCCGTGTTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVQSDSH*LIRVLL Trigger: CAAAAGAACACGGATGAGCCAATGGGAATCACTTTG...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGAGCTGTTCCACTGTTTaGTTAGCGACACTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKSCSTV*LATLMP Trigger: TGGCATCAGTGTCGCTAACCAAACAGTGGAACAGCT...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGTTTGGTCTTCTCCATaGCAATGCAAGCTACTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGEVWSSP*QCKLLA Trigger: GGCGAGTAGCTTGCATTGCCATGGAGAAGACCAAAC...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CACAGATCTGAAATGGCGAAACCAGCAATACCCCCTCCCACCTTACAACAAATTGTTTGGTCTTCTCCATaGCAATGCAAGCTACTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HRSEMAKPAIPPPTLQQIVWSSP*QCKLLA Trigger: GGCGAGTAGCTTGCATTGCCATGGAGAAGACCAAAC...AATTTGTTGTAAGGTGGGAGGGGGTATTGCTGGTTTCGCCATTTCAGATCTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAAGGTCTGGTTGTATGTaGAATAGGGTACGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGRSGCM*NRVRKP Trigger: CGGTTTGCGTACCCTATTCCACATACAACCAGACCT...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTAAGGTCTGGTTGTATGTaGAATAGGGTACGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLRSGCM*NRVRKP Trigger: CGGTTTGCGTACCCTATTCCACATACAACCAGACCT...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAACATGGATTTTCCGAATaGTCTCCAGTTTTGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQHGFSE*SPVLSR Trigger: ACGGGACAAAACTGGAGACCATTCGGAAAATCCATG...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGCATGGATTTTCCGAATaGTCTCCAGTTTTGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEHGFSE*SPVLSR Trigger: ACGGGACAAAACTGGAGACCATTCGGAAAATCCATG...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCATCAGCCCCTGCTCATaGATTTTCCGAATGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EHIGKALCKTTPELSLNGISPCS*IFRMVS Trigger: GGAGACCATTCGGAAAATCCATGAGCAGGGGCTGAT...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGTCCTTTTGGTTGGGTaGTTGATGGCAAGTCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQVLLVG*LMASPH Trigger: GTGAGGACTTGCCATCAACCACCCAACCAAAAGGAC...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGTGCCGAGTTTTCTTTTaGGGCAAGGAGAACACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKCRVFF*GKENTV Trigger: CACTGTGTTCTCCTTGCCTCAAAAGAAAACTCGGCA...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACGTGCTTCATAAACAGTaGTCCTTTCAGCAGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPITKRLFPRRRWLPVLYVLHKQ*SFQQDP Trigger: TGGATCCTGCTGAAAGGATCACTGTTTATGAAGCAC...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTCAGTCTGTAAGTGCGTaGATCTCTTCCAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGQSVSA*ISSRLS Trigger: GGACAGCCTGGAAGAGATTCACGCACTTACAGACTG...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCATTCTCAGGGTAACATaGAATTTCTTCCAATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PADTRPITKRLFPRRRWLILRVT*NFFQYL Trigger: GAGGTATTGGAAGAAATTTCATGTTACCCTGAGAAT...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTAGTAAGGCCATGAAATaGGGTTGTGTTAAAATACGC | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVSKAMK*GCVKIR Trigger: GCGTATTTTAACACAACCTCATTTCATGGCCTTACT...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCATCTGAAGTAAGGCCATaGAATGAGGTTGTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ADTRPITKRLFPRRRWLPSEVRP*NEVVLK Trigger: TTTTAACACAACCTCATTTCATGGCCTTACTTCAGA...TGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGTCTGAAGTAAGGCCATaGAATGAGGTTGTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWSEVRP*NEVVLK Trigger: TTTTAACACAACCTCATTTCATGGCCTTACTTCAGA...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGCCATGGGTGATTCAGTaGTTCATAAACAGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEPWVIQ*FINSDP Trigger: AGGATCACTGTTTATGAAGCACTGAATCACCCATGG...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTTTGGCTCTCTGTACTaGATCACTTGGAGGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RPITKRLFPRRRWLPVLYFGSLY*ITWRIP Trigger: AGGAATCCTCCAAGTGATGCAGTACAGAGAGCCAAA...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGATTTGGCTCTCTGTACTaGATCACTTGGAGGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGFGSLY*ITWRIP Trigger: AGGAATCCTCCAAGTGATGCAGTACAGAGAGCCAAA...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGACTGTAAACTTCATGTaGCACTACATCATGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGTVNFM*HYIMSL Trigger: CAGACTCATGATGTAGTGGCACATGAAGTTTACAGT...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGTTTTCCAGTTTACCCTaGCACCAGTTGTGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKFSSLP*HQLWSS Trigger: GGATGACCACAACTGGTGGCAGGGTAAACTGGAAAA...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGTCTTCTCCATGGCAATaGAAGCTACTCGCCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKSSPWQ*KLLAIP Trigger: AGGAATGGCGAGTAGCTTGCATTGCCATGGAGAAGA...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACACTGCTTCTTTTTCTTaGCAAACCAAGTACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILTPLGVPRERNVLGCNYTASFS*QTKYSW Trigger: CCAGCTGTACTTGGTTTGGCAAGAAAAAGAAGCAGT...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATTGCATCCTCATGGCTaGCATACTCCAAGTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLLHPHG*HTPSIR Trigger: ACGAATACTTGGAGTATGGCAGCCATGAGGATGCAA...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAATCGCAATCAGCCCCTaGTCATGGATTTTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQIAISP*SWIFRM Trigger: CATTCGGAAAATCCATGAGCAGGGGCTGATTGCGAT...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAAAAAGGAGCAAACTCTaGAGTCCTCAGGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSKRSKL*SPQDLQ Trigger: CTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTT...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGTTTGCTTAGATGTGTaGCTGAGTTGTGATGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGVCLDV*LSCDEV Trigger: CACCTCATCACAACTCAGGCACACATCTAAGCAAAC...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115435.9 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGGCATATGACAGATACTaGCTTCCCGCTTTAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEAYDRY*LPALDL Trigger: AAGATCTAAAGCGGGAAGCCAGTATCTGTCATATGC...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCTCTCTTGACCACTTCTaGGGCCATAAAGTGAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EHIGKALCKTTPELSLNGSLDHF*GHKVRC Trigger: ACACCTCACTTTATGGCCCCAGAAGTGGTCAAGAGA...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTCAAACAATCTTTCCTTaGTTCCGTAGAAAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVQTIFP*FRRKAN Trigger: GTTTGCCTTTCTACGGAACCAAGGAAAGATTGTTTG...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCGCACTTTCAGAGATATaGCTCCACTGCCTTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSALSEI*LHCLGF Trigger: GAATCCAAGGCAGTGGAGCCATATCTCTGAAAGTGC...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGCGTACTAGGTCTTTaGCACTTTCAGAGATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQGVLGL*HFQRYG Trigger: GCCATATCTCTGAAAGTGCCAAAGACCTAGTACGCC...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAACCGCTCCTTAAGCCATaGGTGATTCAGTGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGEPLLKP*VIQCFI Trigger: TATGAAGCACTGAATCACCCATGGCTTAAGGAGCGG...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTACTGTACTGCATCACTTaGAGGATTCCTGATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLLYCIT*RIPDLW Trigger: CCACAAATCAGGAATCCTCCAAGTGATGCAGTACAG...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGCAAAGTGATTCCCATTaGCTCATCCGTGTTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEQSDSH*LIRVLL Trigger: CAAAAGAACACGGATGAGCCAATGGGAATCACTTTG...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCAGCTGTTCCACTGTTTaGTTAGCGACACTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: EHIGKALCKTTPELSLNGSCSTV*LATLMP Trigger: TGGCATCAGTGTCGCTAACCAAACAGTGGAACAGCT...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GAGAACAGATGGAGCAGGCTGTGTTCAGTTCTGACAAACAGCCACCACTATCTACTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: ENRWSRLCSVLTNSHHYLLSAVA*HNLEGN Trigger: ATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAG...TAGATAGTGGTGGCTGTTTGTCAGAACTGAACACAGCCTGCTCCATCTGTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGTACATTGCATCCTCATaGCTGCCATACTCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEYIASS*LPYSKY Trigger: ATACTTGGAGTATGGCAGCCATGAGGATGCAATGTA...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGGCTTGATTTTTGGAATGCTTAGCAGTGTGCCCTCTATTCTTTCCAAGCATGGATTTTCCGAATaGTCTCCAGTTTTGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ARGLIFGMLSSVPSILSKHGFSE*SPVLSR Trigger: ACGGGACAAAACTGGAGACCATTCGGAAAATCCATG...CTTGGAAAGAATAGAGGGCACACTGCTAAGCATTCCAAAAATCAAGCCCCTGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATGCCCAGTTTCTCTGTTaGTACATCGCCGTACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDAQFLC*YIAVQH Trigger: GTGTTGTACGGCGATGTATCAACAGAGAAACTGGGC...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 |
||
| CDS-3UTR TCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAACCCTGGACTTGATGTaGACTTGGCTACATCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGETLDLM*TWLHQQ Trigger: TTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGT...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGGATGCTTCAGCATATaGCAGATACTGGCTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LAVITDCFVQHRHTDSINGCFSI*QILASR Trigger: GCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCC...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGATTCTCAGGGTAACATaGAATTTCTTCCAATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGILRVT*NFFQYL Trigger: GAGGTATTGGAAGAAATTTCATGTTACCCTGAGAAT...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGACATTCATTTTCAAAGTaGTTCCCATTGGCTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGHSFSK*FPLAHP Trigger: CGGATGAGCCAATGGGAATCACTTTGAAAATGAATG...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATCATACCCCCATGCATaGTTCTTGCGACAATACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLSYPHA*FLRQYN Trigger: ATTGTATTGTCGCAAGAATCATGCATGGGGGTATGA...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCGTTCAGGAGAAGGAATaGGACCTGCAGTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSVQEKE*DLQFHF Trigger: AAAATGGAACTGCAGGTCTCATTCCTTCTCCTGAAC...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATTTTACAGCAAATTGTTaGCCAGTTTCTCTGTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: LAGCFVALPTDTYSWAFDFTANC*PVSLLI Trigger: TATCAACAGAGAAACTGGGCAACAATTTGCTGTAAA...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGTTTACAGCAAATTGTTaGCCAGTTTCTCTGTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: RPADTRPITKRLFPRRRWFTANC*PVSLLI Trigger: TATCAACAGAGAAACTGGGCAACAATTTGCTGTAAA...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTAGGACGAAGACTGAGTaGGGTAGCTTGGCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGRTKTE*GSLAQS Trigger: AGATTGTGCCAAGCTACCGCACTCAGTCTTCGTCCT...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTACACTGCGTTGTGCTTTaGCAAATATTTATCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLHCVVL*QIFIFV Trigger: TACAAAGATAAATATTTGGCAAAGCACAACGCAGTG...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAATTGCATCCTCATGGCTaGCATACTCCAAGTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGELHPHG*HTPSIR Trigger: ACGAATACTTGGAGTATGGCAGCCATGAGGATGCAA...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTGTGCATATGTTCTCTaGAAGACATCGGACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYCAYVL*KTSDSF Trigger: GAAGGAGTCCGATGTCTTGCAGAGAACATATGCACA...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCTGTGCATATGTTCTCTaGAAGACATCGGACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSCAYVL*KTSDSF Trigger: GAAGGAGTCCGATGTCTTGCAGAGAACATATGCACA...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAAATTCTCCTAACTGAATaGCCACCCCAAAGCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ERTHWQSFMQNHPRTESEILLTE*PPQSPQ Trigger: TTGGGGGCTTTGGGGTGGCCATTCAGTTAGGAGAAT...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACATGGCTCCACTGCCTTaGATTCATCTTATATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILTPLGVPRERNVLGCNYMAPLP*IHLIFS Trigger: GGAAAATATAAGATGAATCCAAGGCAGTGGAGCCAT...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGTTTGTTCTACTGTTTCTaGAAGATGGATTTTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLCCPTNRYLFLGLRWVSLFYCF*KMDFVG Trigger: GCCTACAAAATCCATCTTCCAGAAACAGTAGAACAA...ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTAGGATTCCTGATTTGTaGCGAAGACTTTGTGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: DTRPITKRLFPRRRWLPVRIPDL*RRLCVN Trigger: ATTAACACAAAGTCTTCGCCACAAATCAGGAATCCT...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCTTCCAATACCTCTTTaGCTCTCTGTACTGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSLPIPL*LSVLHH Trigger: GTGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAG...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAACTTCCAATACCTCTTTaGCTCTCTGTACTGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQLPIPL*LSVLHH Trigger: GTGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAG...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCATCATCCGTGTTCTTTTaGAACTGTACCAGCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSSSVFF*NCTSRT Trigger: AGTTCGGCTGGTACAGTTCCAAAAGAACACGGATGA...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAATTCTTCATCTTTCTTTaGAGGTCTGGTTGTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQFFIFL*RSGCMW Trigger: CCACATACAACCAGACCTCCAAAGAAAGATGAAGAA...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCACATGGATTTTCCGAATaGTCTCCAGTTTTGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSHGFSE*SPVLSR Trigger: ACGGGACAAAACTGGAGACCATTCGGAAAATCCATG...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATATCAGCCCCTGCTCATaGATTTTCCGAATGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDISPCS*IFRMVS Trigger: GGAGACCATTCGGAAAATCCATGAGCAGGGGCTGAT...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| 3UTR CAA 72 bp | AAGCTTAAAAAGATAACAGTAGCTTCAAAGGAATGCTaGGCCTGCCTGCCCCAGGCCTTAGATATAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLKKITVASKEC*ACLPQALDIGK Trigger: CTTCCCTATATCTAAGGCCTGGGGCAGGCAGGCCAAGCATTCCTTTGAAGCTACTGTTATCTTTTTAAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 72 bp | TCCCATGTGGCTGCAAACATCTCCTTCCATTTTCTTTaGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHVAANISFHFL*LGPFAQVHSRE Trigger: CTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAAATGGAAGGAGATGTTTGCAGCCACATGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| 3UTR CAA 72 bp | AATGCCTACTTCTACTCCCAAGCACAAATCCCTCTGTaGAGATTCTCTCCTGGGTCCAAAAGACTCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: NAYFYSQAQIPL*RFSPGSKRLII Trigger: GATGATGAGTCTTTTGGACCCAGGAGAGAATCTCAACAGAGGGATTTGTGCTTGGGAGTAGAAGTAGGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGGGCTTGATTTTTGGAATGCTTAGCAGTGTGCCCTCTATTCTTTCCAAGAAGGAATTGAATTTGTaGCTTGACACAGCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARGLIFGMLSSVPSILSKKELNL*LDTAAS Trigger: ACTAGCTGCTGTGTCAAGTCACAAATTCAATTCCTT...CTTGGAAAGAATAGAGGGCACACTGCTAAGCATTCCAAAAATCAAGCCCCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTAAAGGAATTGAATTTGTaGCTTGACACAGCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLKELNL*LDTAAS Trigger: ACTAGCTGCTGTGTCAAGTCACAAATTCAATTCCTT...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGATTCTCAGGGTAACATaGAATTTCTTCCAATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEILRVT*NFFQYL Trigger: GAGGTATTGGAAGAAATTTCATGTTACCCTGAGAAT...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAATCATACCCCCATGCATaGTTCTTGCGACAATACAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGESYPHA*FLRQYN Trigger: ATTGTATTGTCGCAAGAATCATGCATGGGGGTATGA...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCAGCTACTCGCCATTCCTaGAGTTCAGGAGAAGGAATG | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAATRHS*SSGEGM Trigger: CATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGC...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGTGACAAGATCTAATTaGTCAAACACTGCGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGEVTRSN*SNTALC Trigger: GCACAACGCAGTGTTTGATCAATTAGATCTTGTCAC...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTTCCTTCTGCAGGCGCTaGAGAGATTCATCCTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGSFCRR*RDSSSF Trigger: AAATGAGGATGAATCTCTTCAGCGCCTGCAGAAGGA...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACAGGACGAAGACTGAGTaGGGTAGCTTGGCACAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LAVITDCFVQHRHTDSINRTKTE*GSLAQS Trigger: AGATTGTGCCAAGCTACCGCACTCAGTCTTCGTCCT...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATCTTCTCCATGGCAATaGAAGCTACTCGCCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTHWQSFMQNHPRTESESSPWQ*KLLAIP Trigger: AGGAATGGCGAGTAGCTTGCATTGCCATGGAGAAGA...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAACTGCTTCTTTTTCTTaGCAAACCAAGTACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFPRRRWLPVLYSDSQGETASFS*QTKYSW Trigger: CCAGCTGTACTTGGTTTGGCAAGAAAAAGAAGCAGT...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACGCAAACCGGTCCGGGTaGTTTGTGATGAGGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VNGMYLAVITDCFVQHRHANRSG*FVMRVF Trigger: AAATACCCTCATCACAAAGCACCCGGACCGGTTTGC...GTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTATCGCAATCAGCCCCTaGTCATGGATTTTCCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGIAISP*SWIFRM Trigger: CATTCGGAAAATCCATGAGCAGGGGCTGATTGCGAT...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCATCAGGCAATTTTCTaGACCATTTTGGCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSHQAIF*TILAAH Trigger: ATGAGCTGCCAAAATGGTGCAGAAAATTGCCTGATG...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000128095.3 |
||
| CDS-3UTR CCA 90 bp | CACAGATCTGAAATGGCGAAACCAGCAATACCCCCTCCCACCTTACAACAAATTGCATATGACAGATACTaGCTTCCCGCTTTAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HRSEMAKPAIPPPTLQQIAYDRY*LPALDL Trigger: AAGATCTAAAGCGGGAAGCCAGTATCTGTCATATGC...AATTTGTTGTAAGGTGGGAGGGGGTATTGCTGGTTTCGCCATTTCAGATCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCAATTCTCCTAACTGAATaGCCACCCCAAAGCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAILLTE*PPQSPQ Trigger: TTGGGGGCTTTGGGGTGGCCATTCAGTTAGGAGAAT...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGACAAACAATCTTTCCTTaGTTCCGTAGAAAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGQTIFP*FRRKAN Trigger: GTTTGCCTTTCTACGGAACCAAGGAAAGATTGTTTG...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGATGGCTCCACTGCCTTaGATTCATCTTATATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKMAPLP*IHLIFS Trigger: GGAAAATATAAGATGAATCCAAGGCAGTGGAGCCAT...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAGGATTCCTGATTTGTaGCGAAGACTTTGTGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFFHVGGGSQFYTQIAKERIPDL*RRLCVN Trigger: ATTAACACAAAGTCTTCGCCACAAATCAGGAATCCT...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGCAAAGTGATTCCCATTaGCTCATCCGTGTTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKQSDSH*LIRVLL Trigger: CAAAAGAACACGGATGAGCCAATGGGAATCACTTTG...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCTGTTCCACTGTTTaGTTAGCGACACTGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDSCSTV*LATLMP Trigger: TGGCATCAGTGTCGCTAACCAAACAGTGGAACAGCT...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGACTGCAGTTCCATTTTTaGAGTTTTCCAGTTTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGLQFHF*SFPVYP Trigger: AGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAG...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCACAAACCAAGTACAGCTaGCCTGCTGCTCTTGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAQTKYS*PAALVW Trigger: CCAAACAAGAGCAGCAGGCCAGCTGTACTTGGTTTG...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGGTCTGGTTGTATGTaGAATAGGGTACGCAAACCG | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDRSGCM*NRVRKP Trigger: CGGTTTGCGTACCCTATTCCACATACAACCAGACCT...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGATTCTTCATCTTTCTTTaGAGGTCTGGTTGTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGFFIFL*RSGCMW Trigger: CCACATACAACCAGACCTCCAAAGAAAGATGAAGAA...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATTCTTCATCTTTCTTTaGAGGTCTGGTTGTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLFFIFL*RSGCMW Trigger: CCACATACAACCAGACCTCCAAAGAAAGATGAAGAA...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCATACATTGCATCCTCATaGCTGCCATACTCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSYIASS*LPYSKY Trigger: ATACTTGGAGTATGGCAGCCATGAGGATGCAATGTA...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACATCAGCCCCTGCTCATaGATTTTCCGAATGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAVITDCFVQHRHTDSINISPCS*IFRMVS Trigger: GGAGACCATTCGGAAAATCCATGAGCAGGGGCTGAT...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CAA 72 bp | CCCCGTGAACGGAATGTACTTGGCTGTAATTACAGATaGTTTTGTCCAACACAGACACACCGACAGCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRERNVLGCNYR*FCPTQTHRQHK Trigger: TTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCACGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CAA 72 bp | GTGGGACCGAACACAAGTTATTCTCACAGTATCTTGTaGGTAAGTTGTGACCATCTGGGCACTGACAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VGPNTSYSHSIL*VSCDHLGTDKE Trigger: TTCTTTGTCAGTGCCCAGATGGTCACAACTTACCAACAAGATACTGTGAGAATAACTTGTGTTCGGTCCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| 3UTR CAA 72 bp | CTTGTGGGACCGAACACAAGTTATTCTCACAGTATCTaGTTGGTAAGTTGTGACCATCTGGGCACTGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: LVGPNTSYSHSI*LVSCDHLGTDK Trigger: TTTGTCAGTGCCCAGATGGTCACAACTTACCAACAAGATACTGTGAGAATAACTTGTGTTCGGTCCCACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATGTGCTTCATAAACAGTaGTCCTTTCAGCAGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDVLHKQ*SFQQDP Trigger: TGGATCCTGCTGAAAGGATCACTGTTTATGAAGCAC...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAAGTAAGGCCATGAAATaGGGTTGTGTTAAAATACGC | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSSKAMK*GCVKIR Trigger: GCGTATTTTAACACAACCTCATTTCATGGCCTTACT...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCAGTAAGGCCATGAAATaGGGTTGTGTTAAAATACGC | + |
|
Preference number: 4 (lower is better) Translates to: VGKGEMLKTGEEYEHKNASKAMK*GCVKIR Trigger: GCGTATTTTAACACAACCTCATTTCATGGCCTTACT...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATCTGAAGTAAGGCCATaGAATGAGGTTGTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TRPITKRLFPRRRWLPVLSEVRP*NEVVLK Trigger: TTTTAACACAACCTCATTTCATGGCCTTACTTCAGA...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATTTGGCTCTCTGTACTaGATCACTTGGAGGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ERTHWQSFMQNHPRTESEFGSLY*ITWRIP Trigger: AGGAATCCTCCAAGTGATGCAGTACAGAGAGCCAAA...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCACTGTAAACTTCATGTaGCACTACATCATGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSTVNFM*HYIMSL Trigger: CAGACTCATGATGTAGTGGCACATGAAGTTTACAGT...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAACTGTAAACTTCATGTaGCACTACATCATGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSTVNFM*HYIMSL Trigger: CAGACTCATGATGTAGTGGCACATGAAGTTTACAGT...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCACTGTAAACTTCATGTaGCACTACATCATGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGKGEMLKTGEEYEHKNATVNFM*HYIMSL Trigger: CAGACTCATGATGTAGTGGCACATGAAGTTTACAGT...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCATCTTCTCCATGGCAATaGAAGCTACTCGCCATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKASSPWQ*KLLAIP Trigger: AGGAATGGCGAGTAGCTTGCATTGCCATGGAGAAGA...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACTCAAACACTGCGTTGTaGTTTGCCAAATATTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: ILTPLGVPRERNVLGCNYSNTAL*FAKYLS Trigger: AGATAAATATTTGGCAAAGCACAACGCAGTGTTTGA...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATTGCATCCTCATGGCTaGCATACTCCAAGTATTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ERTHWQSFMQNHPRTESELHPHG*HTPSIR Trigger: ACGAATACTTGGAGTATGGCAGCCATGAGGATGCAA...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTTGTGCATATGTTCTCTaGAAGACATCGGACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGCAYVL*KTSDSF Trigger: GAAGGAGTCCGATGTCTTGCAGAGAACATATGCACA...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACCAAACAATCTTTCCTTaGTTCCGTAGAAAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYQTIFP*FRRKAN Trigger: GTTTGCCTTTCTACGGAACCAAGGAAAGATTGTTTG...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAATGGCTCCACTGCCTTaGATTCATCTTATATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQMAPLP*IHLIFS Trigger: GGAAAATATAAGATGAATCCAAGGCAGTGGAGCCAT...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGGCGTACTAGGTCTTTaGCACTTTCAGAGATATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LAVITDCFVQHRHTDSINGVLGL*HFQRYG Trigger: GCCATATCTCTGAAAGTGCCAAAGACCTAGTACGCC...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACCCGCTCCTTAAGCCATaGGTGATTCAGTGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: VNGMYLAVITDCFVQHRHPLLKP*VIQCFI Trigger: TATGAAGCACTGAATCACCCATGGCTTAAGGAGCGG...GTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATCTGTACTGCATCACTTaGAGGATTCCTGATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDLYCIT*RIPDLW Trigger: CCACAAATCAGGAATCCTCCAAGTGATGCAGTACAG...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTTCATCCGTGTTCTTTTaGAACTGTACCAGCCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGSSVFF*NCTSRT Trigger: AGTTCGGCTGGTACAGTTCCAAAAGAACACGGATGA...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCTCCTTACTAATAATCTaGATGATGTCACCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VGKGEMLKTGEEYEHKNASLLII*MMSPTR Trigger: CCGAGTTGGTGACATCATCCAGATTATTAGTAAGGA...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACCTGCAGTTCCATTTTTaGAGTTTTCCAGTTTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYLQFHF*SFPVYP Trigger: AGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAG...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGCTGCAGTTCCATTTTTaGAGTTTTCCAGTTTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKLQFHF*SFPVYP Trigger: AGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAG...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCTGCAGTTCCATTTTTaGAGTTTTCCAGTTTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSLQFHF*SFPVYP Trigger: AGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAG...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCTTCTTCATCTTTCTTTaGAGGTCTGGTTGTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSFFIFL*RSGCMW Trigger: CCACATACAACCAGACCTCCAAAGAAAGATGAAGAA...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACGTAAAGCATCCCATCTaGGCTATATGTCTCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VNGMYLAVITDCFVQHRHVKHPI*AICLQQ Trigger: CTGTTGGAGACATATAGCTCAGATGGGATGCTTTAC...GTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCATTCTCAGGGTAACATaGAATTTCTTCCAATACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGKGEMLKTGEEYEHKNAILRVT*NFFQYL Trigger: GAGGTATTGGAAGAAATTTCATGTTACCCTGAGAAT...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAACATTCATTTTCAAAGTaGTTCCCATTGGCTCATCCG | + |
|
Preference number: 4 (lower is better) Translates to: ERTHWQSFMQNHPRTESEHSFSK*FPLAHP Trigger: CGGATGAGCCAATGGGAATCACTTTGAAAATGAATG...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACGTTCAGGAGAAGGAATaGGACCTGCAGTTCCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LAVITDCFVQHRHTDSINVQEKE*DLQFHF Trigger: AAAATGGAACTGCAGGTCTCATTCCTTCTCCTGAAC...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGATTTACAGCAAATTGTTaGCCAGTTTCTCTGTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGFTANC*PVSLLI Trigger: TATCAACAGAGAAACTGGGCAACAATTTGCTGTAAA...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATCCATGGGTGATTCAGTaGTTCATAAACAGTGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDPWVIQ*FINSDP Trigger: AGGATCACTGTTTATGAAGCACTGAATCACCCATGG...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTACTGCTTCTTTTTCTTaGCAAACCAAGTACAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGTASFS*QTKYSW Trigger: CCAGCTGTACTTGGTTTGGCAAGAAAAAGAAGCAGT...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGACACTGCGTTGTGCTTTaGCAAATATTTATCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGHCVVL*QIFIFV Trigger: TACAAAGATAAATATTTGGCAAAGCACAACGCAGTG...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATCAGCTCTACAATGTGTaGATGCTTCAGCATATGACA | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDQLYNV*MLQHMT Trigger: TGTCATATGCTGAAGCATCCACACATTGTAGAGCTG...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCATTGTTCTACTGTTTCTaGAAGATGGATTTTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSLFYCF*KMDFVG Trigger: GCCTACAAAATCCATCTTCCAGAAACAGTAGAACAA...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAATTGTTCTACTGTTTCTaGAAGATGGATTTTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQLFYCF*KMDFVG Trigger: GCCTACAAAATCCATCTTCCAGAAACAGTAGAACAA...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACCTGTACTGCATCACTTaGAGGATTCCTGATTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVITDCFVQHRHTDSINLYCIT*RIPDLW Trigger: CCACAAATCAGGAATCCTCCAAGTGATGCAGTACAG...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAACAAAGTGATTCCCATTaGCTCATCCGTGTTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ERTHWQSFMQNHPRTESEQSDSH*LIRVLL Trigger: CAAAAGAACACGGATGAGCCAATGGGAATCACTTTG...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCACTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKALSAVA*HNLEGN Trigger: ATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAG...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | TTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGTTTCCTTTTGAATGCTaGCAGTTTGACTACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FFHVGGGSQFYTQIAKEKFPFEC*QFDYFF Trigger: GAAGAAGTAGTCAAACTGCCAGCATTCAAAAGGAAA...CTTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CACAGATCTGAAATGGCGAAACCAGCAATACCCCCTCCCACCTTACAACAAATTTTTCCTTTTGAATGCTaGCAGTTTGACTACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRSEMAKPAIPPPTLQQIFPFEC*QFDYFF Trigger: GAAGAAGTAGTCAAACTGCCAGCATTCAAAAGGAAA...AATTTGTTGTAAGGTGGGAGGGGGTATTGCTGGTTTCGCCATTTCAGATCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTTCCTTTTGAATGCTaGCAGTTTGACTACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYFPFEC*QFDYFF Trigger: GAAGAAGTAGTCAAACTGCCAGCATTCAAAAGGAAA...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAAGGAATTGAATTTGTaGCTTGACACAGCAGCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDKELNL*LDTAAS Trigger: ACTAGCTGCTGTGTCAAGTCACAAATTCAATTCCTT...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR TCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCATCATACCCCCATGCATaGTTCTTGCGACAATACAAT | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKASYPHA*FLRQYN Trigger: ATTGTATTGTCGCAAGAATCATGCATGGGGGTATGA...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCAGTGACAAGATCTAATTaGTCAAACACTGCGTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAVTRSN*SNTALC Trigger: GCACAACGCAGTGTTTGATCAATTAGATCTTGTCAC...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCTCAAACACTGCGTTGTaGTTTGCCAAATATTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSSNTAL*FAKYLS Trigger: AGATAAATATTTGGCAAAGCACAACGCAGTGTTTGA...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR GCA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCATCAAACACTGCGTTGTaGTTTGCCAAATATTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: PITKRLFPRRRWLPVLYSSNTAL*FAKYLS Trigger: AGATAAATATTTGGCAAAGCACAACGCAGTGTTTGA...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATCAAACAATCTTTCCTTaGTTCCGTAGAAAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDQTIFP*FRRKAN Trigger: GTTTGCCTTTCTACGGAACCAAGGAAAGATTGTTTG...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATTCCTTACTAATAATCTaGATGATGTCACCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDSLLII*MMSPTR Trigger: CCGAGTTGGTGACATCATCCAGATTATTAGTAAGGA...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCATACATTGCATCCTCATaGCTGCCATACTCCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAYIASS*LPYSKY Trigger: ATACTTGGAGTATGGCAGCCATGAGGATGCAATGTA...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTTCTGAAGTAAGGCCATaGAATGAGGTTGTGTTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGSEVRP*NEVVLK Trigger: TTTTAACACAACCTCATTTCATGGCCTTACTTCAGA...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATTTGTTCTACTGTTTCTaGAAGATGGATTTTGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDLFYCF*KMDFVG Trigger: GCCTACAAAATCCATCTTCCAGAAACAGTAGAACAA...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTTGCTTGGTCCATTTGCACAGGTTCATTCAAGGGAGTTAATGGAGGGTAGGATTCCTGATTTGTaGCGAAGACTTTGTGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLGPFAQVHSRELMEGRIPDL*RRLCVN Trigger: ATTAACACAAAGTCTTCGCCACAAATCAGGAATCCT...ACCCTCCATTAACTCCCTTGAATGAACCTGTGCAAATGGACCAAGCAAAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCATCCTTACTAATAATCTaGATGATGTCACCAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKASLLII*MMSPTR Trigger: CCGAGTTGGTGACATCATCCAGATTATTAGTAAGGA...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACTTCTTCATCTTTCTTTaGAGGTCTGGTTGTATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAVITDCFVQHRHTDSINFFIFL*RSGCMW Trigger: CCACATACAACCAGACCTCCAAAGAAAGATGAAGAA...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CCA 90 bp | GTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACAGGATTCCTGATTTGTaGCGAAGACTTTGTGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: VNGMYLAVITDCFVQHRHRIPDL*RRLCVN Trigger: ATTAACACAAAGTCTTCGCCACAAATCAGGAATCCT...GTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCATTTCCTTTTGAATGCTaGCAGTTTGACTACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAFPFEC*QFDYFF Trigger: GAAGAAGTAGTCAAACTGCCAGCATTCAAAAGGAAA...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | GTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACTTTACAGCAAATTGTTaGCCAGTTTCTCTGTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: VNGMYLAVITDCFVQHRHFTANC*PVSLLI Trigger: TATCAACAGAGAAACTGGGCAACAATTTGCTGTAAA...GTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCACACTGCGTTGTGCTTTaGCAAATATTTATCTTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DYQLGPEQIYNEMKDPKAHCVVL*QIFIFV Trigger: TACAAAGATAAATATTTGGCAAAGCACAACGCAGTG...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR GCA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACTCAAACACTGCGTTGTaGTTTGCCAAATATTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LAVITDCFVQHRHTDSINSNTAL*FAKYLS Trigger: AGATAAATATTTGGCAAAGCACAACGCAGTGTTTGA...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CCA 90 bp | CCAGACATCCACAGGCTTTCCGTAAGGCTCTCTCTTGACCACTTCTaGGGCCATAAAGTGAGGTGTTCCAACGCGGCCTCCAGCAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: PDIHRLSVRLSLDHF*GHKVRCSNAASSNK Trigger: CTTGTTGCTGGAGGCCGCGTTGGAACACCTCACTTTATGGCCCCAGAAGTGGTCAAGAGAGAGCCTTACGGAAAGCCTGTGGATGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128012.2 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATAACATGAAGTGTACCTaGCCTGTGAATCATACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HDAVVSAPPACRGHPRRHNMKCT*PVNHTP Trigger: GGGGGTATGATTCACAGGCAAGGTACACTTCATGTT...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCGCCTGCTGCTCTTGTTaGGTCTTCTCCATGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ATSALLSDSRRPVRTEVPACCSC*VFSMAM Trigger: CATTGCCATGGAGAAGACCAAACAAGAGCAGCAGGC...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS TCA 90 bp | GGTGTTCCAACGCGGCCTCCAGCAACAAGTCCAGATTCTCCTAACTaGATGGCCACCCCAAAGCCCCCAAGTTTAACAGGTGCCGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GVPTRPPATSPDSPN*MATPKPPSLTGAEF Trigger: AAACTCGGCACCTGTTAAACTTGGGGGCTTTGGGGTGGCCATTCAGTTAGGAGAATCTGGACTTGTTGCTGGAGGCCGCGTTGGAACACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128012.2 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTGCTGGCCTGCTGCTCTaGTTTGGTCTTCTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: DTRPITKRLFPRRRWLPVAGLLL*FGLLHG Trigger: GCCATGGAGAAGACCAAACAAGAGCAGCAGGCCAGC...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGCCTGCTGCTCTTGTTaGGTCTTCTCCATGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LAGCFVALPTDTYSWAFDACCSC*VFSMAM Trigger: CATTGCCATGGAGAAGACCAAACAAGAGCAGCAGGC...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGTTCTCTCATCCATGAAGGGGCAACACTCTAGTGACCTCTGGCAGTCTGCCTGCTGCTCTTGTTaGGTCTTCTCCATGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: CPVLSSMKGQHSSDLWQSACCSC*VFSMAM Trigger: CATTGCCATGGAGAAGACCAAACAAGAGCAGCAGGC...AGACTGCCAGAGGTCACTAGAGTGTTGCCCCTTCATGGATGAGAGAACAGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTACTTTTGGTTGGGTGGTaGATGGCAAGTCCTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLLLVGW*MASPHR Trigger: CCTGTGAGGACTTGCCATCAACCACCCAACCAAAAG...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGTGCCCAGTTTCTCTGTaGATACATCGCCGTACAACA | + |
|
Preference number: 5 (lower is better) Translates to: GFRLVLCWLATTLVVVQVCPVSL*IHRRTT Trigger: TGTTGTACGGCGATGTATCAACAGAGAAACTGGGCA...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 |
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| CDS-3UTR CAA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCGGCGTACTAGGTCTTaGGCACTTTCAGAGATATGG | + |
|
Preference number: 5 (lower is better) Translates to: PADTRPITKRLFPRRRWLRRTRS*ALSEIW Trigger: CCATATCTCTGAAAGTGCCAAAGACCTAGTACGCCG...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCACTCATCCGTGTTCTTTaGGAACTGTACCAGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ADTRPITKRLFPRRRWLPLIRVL*ELYQPN Trigger: GTTCGGCTGGTACAGTTCCAAAAGAACACGGATGAG...TGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGCTGGCCTGCTGCTCTaGTTTGGTCTTCTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGAGLLL*FGLLHG Trigger: GCCATGGAGAAGACCAAACAAGAGCAGCAGGCCAGC...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCGTTTTGTCCCGTACATaGCATCCTCATGGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PADTRPITKRLFPRRRWLVLSRT*HPHGCH Trigger: ATGGCAGCCATGAGGATGCAATGTACGGGACAAAAC...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGTTTTGTCCCGTACATaGCATCCTCATGGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LAGCFVALPTDTYSWAFDVLSRT*HPHGCH Trigger: ATGGCAGCCATGAGGATGCAATGTACGGGACAAAAC...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGGTTTTGTCCCGTACATaGCATCCTCATGGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RPADTRPITKRLFPRRRWVLSRT*HPHGCH Trigger: ATGGCAGCCATGAGGATGCAATGTACGGGACAAAAC...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGGGGCAACACTCTAGTGACCTCTGGCAGTCTGAGAACCCCAGCCTGGGCCTCCGTCTCATCAATTTCGTaGTTGATAATTGTGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RGNTLVTSGSLRTPAWASVSSIS*LIIVRS Trigger: CGATCTCACAATTATCAACAACGAAATTGATGAGAC...GGAGGCCCAGGCTGGGGTTCTCAGACTGCCAGAGGTCACTAGAGTGTTGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGTCTTTTGGTTGGGTGGTaGATGGCAAGTCCTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLCCPTNRYLFLGLRWVSLLVGW*MASPHR Trigger: CCTGTGAGGACTTGCCATCAACCACCCAACCAAAAG...ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
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| CDS TCA 90 bp | TGGGTGGTTGATGGCAAGTCCGAAACAGAATTGTTAGTGCTGCTATaGCCATTAGCAGGGGACTGTCTGGAAGTGGAGGGGGAATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVVDGKSETELLVLL*PLAGDCLEVEGESL Trigger: GAGAGATTCCCCCTCCACTTCCAGACAGTCCCCTGCTAATGGTCATAGCAGCACTAACAATTCTGTTTCGGACTTGCCATCAACCACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115438.10 |
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| CDS CCA 90 bp | GGAGGGGGAATCTCTCTCACAGGACGAAGACTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAATACTCCCTCGCATTTCCCTAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGGISLTGRRLSAVA*HNLEGNTPSHFPKH Trigger: ATGCTTAGGGAAATGCGAGGGAGTATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAGTCTTCGTCCTGTGAGAGAGATTCCCCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033321.11 ENSMUST00000115438.10 |
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| CDS-3UTR CAA 90 bp | CTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGTCGGCGTACTAGGTCTTaGGCACTTTCAGAGATATGG | + |
|
Preference number: 5 (lower is better) Translates to: LLCCPTNRYLFLGLRWVSRRTRS*ALSEIW Trigger: CCATATCTCTGAAAGTGCCAAAGACCTAGTACGCCG...ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTCGGCGTACTAGGTCTTaGGCACTTTCAGAGATATGG | + |
|
Preference number: 5 (lower is better) Translates to: DTRPITKRLFPRRRWLPVRRTRS*ALSEIW Trigger: CCATATCTCTGAAAGTGCCAAAGACCTAGTACGCCG...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGCAGTGTGTGAAGATGTaGATCCTGGAAAACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GFRLVLCWLATTLVVVQVQCVKM*ILENTV Trigger: CACAGTGTTTTCCAGGATCAACATCTTCACACACTG...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTAAACATGAAGTGTACCTaGCCTGTGAATCATACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLNMKCT*PVNHTP Trigger: GGGGGTATGATTCACAGGCAAGGTACACTTCATGTT...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACGCCTGCTGCTCTTGTTaGGTCTTCTCCATGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ILTPLGVPRERNVLGCNYACCSC*VFSMAM Trigger: CATTGCCATGGAGAAGACCAAACAAGAGCAGCAGGC...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCGCTGGCCTGCTGCTCTaGTTTGGTCTTCTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSAGLLL*FGLLHG Trigger: GCCATGGAGAAGACCAAACAAGAGCAGCAGGCCAGC...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAAGCTGGCCTGCTGCTCTaGTTTGGTCTTCTCCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LFPRRRWLPVLYSDSQGEAGLLL*FGLLHG Trigger: GCCATGGAGAAGACCAAACAAGAGCAGCAGGCCAGC...TTCTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGGAATGGTCTCCAGTTTaGTCCCGTACATTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPADTRPITKRLFPRRRWEWSPV*SRTLHP Trigger: AGGATGCAATGTACGGGACAAAACTGGAGACCATTC...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CACGATGCTGTGGTCTCAGCACCACCTGCCTGCAGAGGACATCCCAGGCGACATGTCTCATCAATTTCGTaGTTGATAATTGTGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: HDAVVSAPPACRGHPRRHVSSIS*LIIVRS Trigger: CGATCTCACAATTATCAACAACGAAATTGATGAGAC...ATGTCGCCTGGGATGTCCTCTGCAGGCAGGTGGTGCTGAGACCACAGCATCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CCA 90 bp | CCATTGGCTCATCCGTGTTCTTTTGGAACTGTACCAGCCGAACTCTaGTCACATTCTCCATGTCCATGTCTCCGTTTGCACTTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLAHPCSFGTVPAEL*SHSPCPCLRLHFLE Trigger: CTCCAGAAAGTGCAAACGGAGACATGGACATGGAGAATGTGACCAGAGTTCGGCTGGTACAGTTCCAAAAGAACACGGATGAGCCAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACCGGCGTACTAGGTCTTaGGCACTTTCAGAGATATGG | + |
|
Preference number: 5 (lower is better) Translates to: ILTPLGVPRERNVLGCNYRRTRS*ALSEIW Trigger: CCATATCTCTGAAAGTGCCAAAGACCTAGTACGCCG...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCACAGTGTGTGAAGATGTaGATCCTGGAAAACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ADTRPITKRLFPRRRWLPQCVKM*ILENTV Trigger: CACAGTGTTTTCCAGGATCAACATCTTCACACACTG...TGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTGGCTGTAATTACCTCATCCGTGTTCTTTaGGAACTGTACCAGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILTPLGVPRERNVLGCNYLIRVL*ELYQPN Trigger: GTTCGGCTGGTACAGTTCCAAAAGAACACGGATGAG...GTAATTACAGCCAAGTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGGGGATGAGGTCATCCTaGGCTGGATCATATTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: RPADTRPITKRLFPRRRWGMRSS*AGSYSN Trigger: ATTTGAATATGATCCAGCCAAGGATGACCTCATCCC...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CGACCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGTTACCCTGCCACCAGTaGTGGTCATCCTTACTAATA | + |
|
Preference number: 5 (lower is better) Translates to: RPADTRPITKRLFPRRRWLPCHQ*WSSLLI Trigger: TATTAGTAAGGATGACCACAACTGGTGGCAGGGTAA...CCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGGTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTATTACCCTGCCACCAGTaGTGGTCATCCTTACTAATA | + |
|
Preference number: 5 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLLPCHQ*WSSLLI Trigger: TATTAGTAAGGATGACCACAACTGGTGGCAGGGTAA...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGGAATGGTCTCCAGTTTaGTCCCGTACATTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGEWSPV*SRTLHP Trigger: AGGATGCAATGTACGGGACAAAACTGGAGACCATTC...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS GCA 90 bp | AGTGATAGTTGGCGCCGCAATGAAGACAACAAAAGGAGCAAACTCTaGAGTCCTCAGGACCTTCAGTGCCTTTCCAAAACGTGGCAAATC | + |
|
Preference number: 5 (lower is better) Translates to: SDSWRRNEDNKRSKL*SPQDLQCLSKTWQI Trigger: GATTTGCCACGTTTTGGAAAGGCACTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTTGTTGTCTTCATTGCGGCGCCAACTATCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115435.9 |
||
| CDS-3UTR CAA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGTGCCCAGTTTCTCTGTaGATACATCGCCGTACAACA | + |
|
Preference number: 5 (lower is better) Translates to: GFFHVGGGSQFYTQIAKECPVSL*IHRRTT Trigger: TGTTGTACGGCGATGTATCAACAGAGAAACTGGGCA...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 |
||
| CDS-3UTR CAA 90 bp | GGGTTTCGACTTGTACTGTGCTGGCTTGCCACCACCCTTGTGGTTGTTCAGGTGTATGGCTCCACTGCCTaGGATTCATCTTATATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFRLVLCWLATTLVVVQVYGSTA*DSSYIF Trigger: GAAAATATAAGATGAATCCAAGGCAGTGGAGCCATA...CACCTGAACAACCACAAGGGTGGTGGCAAGCCAGCACAGTACAAGTCGAAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTGGAGGATTCCTGATTaGTGGCGAAGACTTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: DTRPITKRLFPRRRWLPVWRIPD*WRRLCV Trigger: AACACAAAGTCTTCGCCACAAATCAGGAATCCTCCA...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGTTCTTCCAATACCTCTTaGGCTCTCTGTACTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLCCPTNRYLFLGLRWVSSSNTS*ALCTAS Trigger: TGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAGA...ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGAACATGAAGTGTACCTaGCCTGTGAATCATACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GFFHVGGGSQFYTQIAKENMKCT*PVNHTP Trigger: GGGGGTATGATTCACAGGCAAGGTACACTTCATGTT...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGTGCGACACTGATGCCATaGATTTCTCGGATTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLCCPTNRYLFLGLRWVSATLMP*ISRISS Trigger: TGATGAAATCCGAGAAATCAATGGCATCAGTGTCGC...ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGGCGACACTGATGCCATaGATTTCTCGGATTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGATLMP*ISRISS Trigger: TGATGAAATCCGAGAAATCAATGGCATCAGTGTCGC...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GCCACCAGTGCTCTTCTCTCAGACTCCAGAAGGCCAGTGAGGACAGAAGTTCCCACTAATGTTTTCCTTTaGAATGCTGGCAGTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: ATSALLSDSRRPVRTEVPTNVFL*NAGSLT Trigger: AGTCAAACTGCCAGCATTCAAAAGGAAAACATTAGT...GGGAACTTCTGTCCTCACTGGCCTTCTGGAGTCTGAGAGAAGAGCACTGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGTTTTGTCCCGTACATaGCATCCTCATGGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKVLSRT*HPHGCH Trigger: ATGGCAGCCATGAGGATGCAATGTACGGGACAAAAC...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GCCAGGGGCTTGATTTTTGGAATGCTTAGCAGTGTGCCCTCTATTCTTTCCAAGCTTTTGGTTGGGTGGTaGATGGCAAGTCCGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: ARGLIFGMLSSVPSILSKLLVGW*MASPKQ Trigger: CTGTTTCGGACTTGCCATCAACCACCCAACCAAAAG...CTTGGAAAGAATAGAGGGCACACTGCTAAGCATTCCAAAAATCAAGCCCCTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115438.10 |
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| CDS TCA 90 bp | TGGCAATGCAAGCTACTCGCCATTCCTGAAGTTCAGGAGAAGGAATaGGACCTGCAGTTCCATTTTTGGAGTTTTCCAGTTTACCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: WQCKLLAIPEVQEKE*DLQFHFWSFPVYPA Trigger: GGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGCTTGCATTGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000139735.3 ENSMUST00000156096.8 |
||
| CDS GCA 90 bp | GCAAGCTACTCGCCATTCCTGAAGTTCAGGAGAAGGAATGAGACCTaGAGTTCCATTTTTGGAGTTTTCCAGTTTACCCTGCCACCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASYSPFLKFRRRNET*SSIFGVFQFTLPPV Trigger: AACTGGTGGCAGGGTAAACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CCTGCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCTATGGCTCCACTGCCTaGGATTCATCTTATATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: PADTRPITKRLFPRRRWLYGSTA*DSSYIF Trigger: GAAAATATAAGATGAATCCAAGGCAGTGGAGCCATA...GAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCATATGGCTCCACTGCCTaGGATTCATCTTATATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: ADTRPITKRLFPRRRWLPYGSTA*DSSYIF Trigger: GAAAATATAAGATGAATCCAAGGCAGTGGAGCCATA...TGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGTGTCCATGTCTCCGTTaGCACTTTCTGGAGAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKCPCLR*HFLENH Trigger: GTGATTCTCCAGAAAGTGCAAACGGAGACATGGACA...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCCTCATCCGTGTTCTTTaGGAACTGTACCAGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EHIGKALCKTTPELSLNGLIRVL*ELYQPN Trigger: GTTCGGCTGGTACAGTTCCAAAAGAACACGGATGAG...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAAGGGATGAGGTCATCCTaGGCTGGATCATATTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQGMRSS*AGSYSN Trigger: ATTTGAATATGATCCAGCCAAGGATGACCTCATCCC...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCAGGCTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATTTGAATGCTGGCAGTTaGACTACTTCTTCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LAGCFVALPTDTYSWAFDLNAGS*TTSSYV Trigger: CACATATGAAGAAGTAGTCAAACTGCCAGCATTCAA...ATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAGCCTGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCAGATCTGTCGTCCTTTaGGTTGGGTGGTTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VGKGEMLKTGEEYEHKNARSVVL*VGWLMA Trigger: TGCCATCAACCACCCAACCAAAAGGACGACAGATCT...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAAGATCTGTCGTCCTTTaGGTTGGGTGGTTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PITKRLFPRRRWLPVLYSRSVVL*VGWLMA Trigger: TGCCATCAACCACCCAACCAAAAGGACGACAGATCT...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS GCA 90 bp | TTTGTAGGCATAACGATCCCGCTCCTTAAGCCATGGGTGATTCAGTaGTTCATAAACAGTGATCCTTTCAGCAGGATCCAGCATCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FVGITIPLLKPWVIQ*FINSDPFSRIQHQH Trigger: ATGCTGATGCTGGATCCTGCTGAAAGGATCACTGTTTATGAAGCACTGAATCACCCATGGCTTAAGGAGCGGGATCGTTATGCCTACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128012.2 ENSMUST00000156096.8 |
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| CDS CCA 90 bp | TGCTCTTACATAGATCTCACAGGACGAAGACTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAATACTCCCTCGCATTTCCCTAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: CSYIDLTGRRLSAVA*HNLEGNTPSHFPKH Trigger: ATGCTTAGGGAAATGCGAGGGAGTATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAGTCTTCGTCCTGTGAGATCTATGTAAGAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139735.3 |
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| CDS-3UTR CAA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTGCCCAGTTTCTCTGTaGATACATCGCCGTACAACA | + |
|
Preference number: 5 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYCPVSL*IHRRTT Trigger: TGTTGTACGGCGATGTATCAACAGAGAAACTGGGCA...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 |
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| CDS-3UTR CAA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGCAGTGTGTGAAGATGTaGATCCTGGAAAACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKQCVKM*ILENTV Trigger: CACAGTGTTTTCCAGGATCAACATCTTCACACACTG...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CACAGATCTGAAATGGCGAAACCAGCAATACCCCCTCCCACCTTACAACAAATTTGTCCATGTCTCCGTTaGCACTTTCTGGAGAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: HRSEMAKPAIPPPTLQQICPCLR*HFLENH Trigger: GTGATTCTCCAGAAAGTGCAAACGGAGACATGGACA...AATTTGTTGTAAGGTGGGAGGGGGTATTGCTGGTTTCGCCATTTCAGATCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCTGTCCATGTCTCCGTTaGCACTTTCTGGAGAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSCPCLR*HFLENH Trigger: GTGATTCTCCAGAAAGTGCAAACGGAGACATGGACA...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTAGGGATGAGGTCATCCTaGGCTGGATCATATTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TRPITKRLFPRRRWLPVLGMRSS*AGSYSN Trigger: ATTTGAATATGATCCAGCCAAGGATGACCTCATCCC...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTTACCCTGCCACCAGTaGTGGTCATCCTTACTAATA | + |
|
Preference number: 5 (lower is better) Translates to: RPITKRLFPRRRWLPVLYLPCHQ*WSSLLI Trigger: TATTAGTAAGGATGACCACAACTGGTGGCAGGGTAA...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTTGTTGCCCTACCAACCGATACTTATTCCTGGGCCTTCGATGGGTCAGTTTGAATGCTGGCAGTTaGACTACTTCTTCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLCCPTNRYLFLGLRWVSLNAGS*TTSSYV Trigger: CACATATGAAGAAGTAGTCAAACTGCCAGCATTCAA...ACTGACCCATCGAAGGCCCAGGAATAAGTATCGGTTGGTAGGGCAACAAAGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GCTGACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGATGTCTTGCATCATTaGGTCATGAGATACAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: ADTRPITKRLFPRRRWLPDVLHH*VMRYKV Trigger: TACTTTGTATCTCATGACCAAATGATGCAAGACATC...TGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACGAATGGTCTCCAGTTTaGTCCCGTACATTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYEWSPV*SRTLHP Trigger: AGGATGCAATGTACGGGACAAAACTGGAGACCATTC...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGAATGGTCTCCAGTTTaGTCCCGTACATTGCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQEWSPV*SRTLHP Trigger: AGGATGCAATGTACGGGACAAAACTGGAGACCATTC...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | AGGGACCGCTTCCTGCCACTCTTCCTTTGCTGGGGAACTCTGCAGCTTTATCTAGTCTCATCAATTTCGTaGTTGATAATTGTGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RDRFLPLFLCWGTLQLYLVSSIS*LIIVRS Trigger: CGATCTCACAATTATCAACAACGAAATTGATGAGAC...TAGATAAAGCTGCAGAGTTCCCCAGCAAAGGAAGAGTGGCAGGAAGCGGTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS TCA 90 bp | TTTCTGGAGAATCACCGTTTAAATAGGGGGAAGTCGGGGGAGGTGTaGCCCTTAATGCTTCATCACTGTAAACTTCATGTGCCACTACAT | + |
|
Preference number: 5 (lower is better) Translates to: FLENHRLNRGKSGEV*PLMLHHCKLHVPLH Trigger: ATGTAGTGGCACATGAAGTTTACAGTGATGAAGCATTAAGGGTCACACCTCCCCCGACTTCCCCCTATTTAAACGGTGATTCTCCAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGTATGGCTCCACTGCCTaGGATTCATCTTATATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEYGSTA*DSSYIF Trigger: GAAAATATAAGATGAATCCAAGGCAGTGGAGCCATA...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCAAGGACCAGAGTCATGTCAGTGCCCTGTTCTCTCATCCATGAAGGGGACTTTGTGTTAATTTaGTCATACAGATCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: VFPRTRVMSVPCSLIHEGDFVLI*SYRSSS Trigger: ACTGCTGGATCTGTATGACAAAATTAACACAAAGTC...CCCTTCATGGATGAGAGAACAGGGCACTGACATGACTCTGGTCCTTGGAAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCTGGAGGATTCCTGATTaGTGGCGAAGACTTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSWRIPD*WRRLCV Trigger: AACACAAAGTCTTCGCCACAAATCAGGAATCCTCCA...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCATCTTCCAATACCTCTTaGGCTCTCTGTACTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PITKRLFPRRRWLPVLYSSSNTS*ALCTAS Trigger: TGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAGA...TGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTCTTCCAATACCTCTTaGGCTCTCTGTACTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYSSNTS*ALCTAS Trigger: TGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAGA...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCTCTTCCAATACCTCTTaGGCTCTCTGTACTGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VGKGEMLKTGEEYEHKNASSNTS*ALCTAS Trigger: TGATGCAGTACAGAGAGCCAAAGAGGTATTGGAAGA...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | ACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCGCGACACTGATGCCATaGATTTCTCGGATTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: TKRLFPRRRWLPVLYSDSATLMP*ISRISS Trigger: TGATGAAATCCGAGAAATCAATGGCATCAGTGTCGC...GCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATGGCGCGACACTGATGCCATaGATTTCTCGGATTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: EHIGKALCKTTPELSLNGATLMP*ISRISS Trigger: TGATGAAATCCGAGAAATCAATGGCATCAGTGTCGC...GCCATTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GTTGGGAAGGGTGAGATGCTGAAAACAGGAGAGGAGTATGAACACAAAAATGCCGGGATGAGGTCATCCTaGGCTGGATCATATTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VGKGEMLKTGEEYEHKNAGMRSS*AGSYSN Trigger: ATTTGAATATGATCCAGCCAAGGATGACCTCATCCC...GGCATTTTTGTGTTCATACTCCTCTCCTGTTTTCAGCATCTCACCCTTCCCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACTTACCCTGCCACCAGTaGTGGTCATCCTTACTAATA | + |
|
Preference number: 5 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYLPCHQ*WSSLLI Trigger: TATTAGTAAGGATGACCACAACTGGTGGCAGGGTAA...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTACTAATGTTTTCCTTTaGAATGCTGGCAGTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: DTRPITKRLFPRRRWLPVTNVFL*NAGSLT Trigger: AGTCAAACTGCCAGCATTCAAAAGGAAAACATTAGT...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GACACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTGATGTCTTGCATCATTaGGTCATGAGATACAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DTRPITKRLFPRRRWLPVDVLHH*VMRYKV Trigger: TACTTTGTATCTCATGACCAAATGATGCAAGACATC...AACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAAGTTTTGTCCCGTACATaGCATCCTCATGGCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: ERTHWQSFMQNHPRTESEVLSRT*HPHGCH Trigger: ATGGCAGCCATGAGGATGCAATGTACGGGACAAAAC...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS GCA 90 bp | TGTCTCATCAATTTCGTTGTTGATAATTGTGAGATCGAAGTAGTGTaGATATGTTCTCTGCAAGACATCGGACTCCTTCTGCAGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CLINFVVDNCEIEVV*ICSLQDIGLLLQAL Trigger: CAGCGCCTGCAGAAGGAGTCCGATGTCTTGCAGAGAACATATGCACACTACTTCGATCTCACAATTATCAACAACGAAATTGATGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CAGACACACCGACAGCATAAACGCTCGCGACTGTCCACATGCATTAAGAGTCAAGACTTTGTGTTAATTTaGTCATACAGATCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: QTHRQHKRSRLSTCIKSQDFVLI*SYRSSS Trigger: ACTGCTGGATCTGTATGACAAAATTAACACAAAGTC...TTGACTCTTAATGCATGTGGACAGTCGCGAGCGTTTATGCTGTCGGTGTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACCTCATCCGTGTTCTTTaGGAACTGTACCAGCCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VNGMYLAVITDCFVQHRHLIRVL*ELYQPN Trigger: GTTCGGCTGGTACAGTTCCAAAAGAACACGGATGAG...GTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGGATGTCTTGCATCATTaGGTCATGAGATACAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: GFFHVGGGSQFYTQIAKEDVLHH*VMRYKV Trigger: TACTTTGTATCTCATGACCAAATGATGCAAGACATC...CTCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | TTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACACCGACAGCATAAACAGATCTGTCGTCCTTTaGGTTGGGTGGTTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAVITDCFVQHRHTDSINRSVVL*VGWLMA Trigger: TGCCATCAACCACCCAACCAAAAGGACGACAGATCT...GTTTATGCTGTCGGTGTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS TCA 90 bp | CTATATGTCTCCAACAGCTCTACAATGTGTGGATGCTTCAGCATATaGCAGATACTGGCTTCCCGCTTTAGATCTTCTGTACTTAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LYVSNSSTMCGCFSI*QILASRFRSSVLNP Trigger: AGGGTTAAGTACAGAAGATCTAAAGCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCCACACATTGTAGAGCTGTTGGAGACATATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS GCA 90 bp | TCCGAATGGTCTCCAGTTTTGTCCCGTACATTGCATCCTCATGGCTaGCATACTCCAAGTATTCGTTATTTGAGATGTCTTGCATCATTT | + |
|
Preference number: 5 (lower is better) Translates to: SEWSPVLSRTLHPHG*HTPSIRYLRCLASF Trigger: AAATGATGCAAGACATCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGATGCAATGTACGGGACAAAACTGGAGACCATTCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CCA 90 bp | ATTTTCCGAATGGTCTCCAGTTTTGTCCCGTACATTGCATCCTCATaGCTGCCATACTCCAAGTATTCGTTATTTGAGATGTCTTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: IFRMVSSFVPYIASS*LPYSKYSLFEMSCI Trigger: GATGCAAGACATCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGATGCAATGTACGGGACAAAACTGGAGACCATTCGGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACGGACTTGATGTGAACTaGGCTACATCAACAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPITKRLFPRRRWLPVLYGLDVN*ATSTIF Trigger: AAAAATTGTTGATGTAGCCAAGTTCACATCAAGTCC...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTAAGTTTTCTCCTTGCATaGAATTTCCTCAGTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TRPITKRLFPRRRWLPVLSFLLA*NFLSCS Trigger: AGAACAACTGAGGAAATTCAATGCAAGGAGAAAACT...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAACAGTGTGTGAAGATGTaGATCCTGGAAAACACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERTHWQSFMQNHPRTESEQCVKM*ILENTV Trigger: CACAGTGTTTTCCAGGATCAACATCTTCACACACTG...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | ACAAGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTAGACTTTGTGTTAATTTaGTCATACAGATCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TRPITKRLFPRRRWLPVLDFVLI*SYRSSS Trigger: ACTGCTGGATCTGTATGACAAAATTAACACAAAGTC...TAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATTGGAGGATTCCTGATTaGTGGCGAAGACTTTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDWRIPD*WRRLCV Trigger: AACACAAAGTCTTCGCCACAAATCAGGAATCCTCCA...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | GTGAACGGAATGTACTTGGCTGTAATTACAGATTGTTTTGTCCAACACAGACACTGTCCATGTCTCCGTTaGCACTTTCTGGAGAATCAC | + |
|
Preference number: 5 (lower is better) Translates to: VNGMYLAVITDCFVQHRHCPCLR*HFLENH Trigger: GTGATTCTCCAGAAAGTGCAAACGGAGACATGGACA...GTGTCTGTGTTGGACAAAACAATCTGTAATTACAGCCAAGTACATTCCGTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGACTAATGTTTTCCTTTaGAATGCTGGCAGTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKTNVFL*NAGSLT Trigger: AGTCAAACTGCCAGCATTCAAAAGGAAAACATTAGT...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGATGTCTTGCATCATTaGGTCATGAGATACAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RGFFHVGGGSQFYTQIAKDVLHH*VMRYKV Trigger: TACTTTGTATCTCATGACCAAATGATGCAAGACATC...CTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGGCCGATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACGTCTCATCAATTTCGTaGTTGATAATTGTGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RPITKRLFPRRRWLPVLYVSSIS*LIIVRS Trigger: CGATCTCACAATTATCAACAACGAAATTGATGAGAC...GTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTATCGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAGGAGTCTCATCAATTTCGTaGTTGATAATTGTGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RLFPRRRWLPVLYSDSQGVSSIS*LIIVRS Trigger: CGATCTCACAATTATCAACAACGAAATTGATGAGAC...TCCTTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS TCA 90 bp | TGGCTTCCCGCTTTAGATCTTCTGTACTTAACCCTGGACTTGATGTaGACTTGGCTACATCAACAATTTTTACAGCAAATTGTTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WLPALDLLYLTLDLM*TWLHQQFLQQIVAQ Trigger: CTGGGCAACAATTTGCTGTAAAAATTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGTTAAGTACAGAAGATCTAAAGCGGGAAGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACGGACTTGATGTGAACTaGGCTACATCAACAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYGLDVN*ATSTIF Trigger: AAAAATTGTTGATGTAGCCAAGTTCACATCAAGTCC...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CATAATAGCAATTTATTCTTACTCCCCTGGGTGTGCCCCGTGAACGGAATGTACAGTTTTCTCCTTGCATaGAATTTCCTCAGTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HNSNLFLLPWVCPVNGMYSFLLA*NFLSCS Trigger: AGAACAACTGAGGAAATTCAATGCAAGGAGAAAACT...GTACATTCCGTTCACGGGGCACACCCAGGGGAGTAAGAATAAATTGCTATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | AAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATAGCCAAAGTTTTCTCCTTGCATaGAATTTCCTCAGTTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: KRLFPRRRWLPVLYSDSQSFLLA*NFLSCS Trigger: AGAACAACTGAGGAAATTCAATGCAAGGAGAAAACT...TTGGCTATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS-3UTR CAA 90 bp | CACAGATCTGAAATGGCGAAACCAGCAATACCCCCTCCCACCTTACAACAAATTACTAATGTTTTCCTTTaGAATGCTGGCAGTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: HRSEMAKPAIPPPTLQQITNVFL*NAGSLT Trigger: AGTCAAACTGCCAGCATTCAAAAGGAAAACATTAGT...AATTTGTTGTAAGGTGGGAGGGGGTATTGCTGGTTTCGCCATTTCAGATCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | CACAGATCTGAAATGGCGAAACCAGCAATACCCCCTCCCACCTTACAACAAATTGATGTCTTGCATCATTaGGTCATGAGATACAAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HRSEMAKPAIPPPTLQQIDVLHH*VMRYKV Trigger: TACTTTGTATCTCATGACCAAATGATGCAAGACATC...AATTTGTTGTAAGGTGGGAGGGGGTATTGCTGGTTTCGCCATTTCAGATCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS TCA 90 bp | ATCTGCTCCATCCATAAATTCAAAAACCATGTAAAGCATCCCATCTaGGCTATATGTCTCCAACAGCTCTACAATGTGTGGATGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ICSIHKFKNHVKHPI*AICLQQLYNVWMLQ Trigger: CTGAAGCATCCACACATTGTAGAGCTGTTGGAGACATATAGCTCAGATGGGATGCTTTACATGGTTTTTGAATTTATGGATGGAGCAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000124710.2 ENSMUST00000156096.8 |
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| CDS TCA 90 bp | CTATATGTCTCCAACAGCTCTACAATGTGTGGATGCTTCAGCATATaGCAGATACTGGCTTCCCGCTTTAGATTTGAAATCCATCTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LYVSNSSTMCGCFSI*QILASRFRFEIHLL Trigger: TAAGAGATGGATTTCAAATCTAAAGCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCCACACATTGTAGAGCTGTTGGAGACATATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124710.2 |
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| CDS GCA 90 bp | CTTGATGTGAACTTGGCTACATCAACAATTTTTACAGCAAATTGTTaGCCAGTTTCTCTGTTGATACATCGCCGTACAACACTGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LDVNLATSTIFTANC*PVSLLIHRRTTLKG Trigger: TCCCTTCAGTGTTGTACGGCGATGTATCAACAGAGAAACTGGGCAACAATTTGCTGTAAAAATTGTTGATGTAGCCAAGTTCACATCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000124710.2 |
||
| CDS-3UTR CAA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATTTGAATGCTGGCAGTTaGACTACTTCTTCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDLNAGS*TTSSYV Trigger: CACATATGAAGAAGTAGTCAAACTGCCAGCATTCAA...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGAACACATTGGCAAAGCTTTATGCAAAACCACCCCAGAACTGAGTCTGAATTGAATGCTGGCAGTTaGACTACTTCTTCATATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ERTHWQSFMQNHPRTESELNAGS*TTSSYV Trigger: CACATATGAAGAAGTAGTCAAACTGCCAGCATTCAA...TTCAGACTCAGTTCTGGGGTGGTTTTGCATAAAGCTTTGCCAATGTGTTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
||
| CDS-3UTR CAA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATATTTTCTGCACCATTTaGGCAGCTCATTTAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDIFCTI*AAHLNL Trigger: CAGGTTTAAATGAGCTGCCAAAATGGTGCAGAAAAT...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000128095.3 |
||
| CDS-3UTR CAA 90 bp | ATAACAAAGAGGCTTTTTCCACGTAGGAGGTGGCTCCCAGTTTTATACTCAGATGTCTCATCAATTTCGTaGTTGATAATTGTGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: ITKRLFPRRRWLPVLYSDVSSIS*LIIVRS Trigger: CGATCTCACAATTATCAACAACGAAATTGATGAGAC...ATCTGAGTATAAAACTGGGAGCCACCTCCTACGTGGAAAAAGCCTCTTTGTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS TCA 90 bp | TTGAAATCCATCTCTTACCTTCTGTACTTAACCCTGGACTTGATGTaGACTTGGCTACATCAACAATTTTTACAGCAAATTGTTGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKSISYLLYLTLDLM*TWLHQQFLQQIVAQ Trigger: CTGGGCAACAATTTGCTGTAAAAATTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGTTAAGTACAGAAGGTAAGAGATGGATTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124710.2 |
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| CDS-3UTR CAA 90 bp | GATTACCAGCTTGGACCTGAACAAATCTATAATGAAATGAAGGACCCAAAGGCAGACTTTGTGTTAATTTaGTCATACAGATCCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DYQLGPEQIYNEMKDPKADFVLI*SYRSSS Trigger: ACTGCTGGATCTGTATGACAAAATTAACACAAAGTC...TGCCTTTGGGTCCTTCATTTCATTATAGATTTGTTCAGGTCCAAGCTGGTAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS TCA 90 bp | GTACATTGCATCCTCATGGCTGCCATACTCCAAGTATTCGTTATTTaGGATGTCTTGCATCATTTGGTCATGAGATACAAAGTAATAATT | + |
|
Preference number: 5 (lower is better) Translates to: VHCILMAAILQVFVI*DVLHHLVMRYKVII Trigger: AATTATTACTTTGTATCTCATGACCAAATGATGCAAGACATCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGATGCAATGTAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | CACAGGCTTTCCGTAAGGCTCTCTCTTGACCACTTCTaGGGCCATAAAGTGAGGTGTTCCAACGCGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HRLSVRLSLDHF*GHKVRCSNAAS Trigger: GGAGGCCGCGTTGGAACACCTCACTTTATGGCCCCAGAAGTGGTCAAGAGAGAGCCTTACGGAAAGCCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128012.2 ENSMUST00000156096.8 |
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| CDS TCA 72 bp | ACGCGGCCTCCAGCAACAAGTCCAGATTCTCCTAACTaGATGGCCACCCCAAAGCCCCCAAGTTTAACAGGT | + |
|
Preference number: 6 (lower is better) Translates to: TRPPATSPDSPN*MATPKPPSLTG Trigger: ACCTGTTAAACTTGGGGGCTTTGGGGTGGCCATTCAGTTAGGAGAATCTGGACTTGTTGCTGGAGGCCGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128012.2 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | GCAGGATCCAGCATCAGCATGCGGCGTACTAGGTCTTaGGCACTTTCAGAGATATGGCTCCACTGCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: AGSSISMRRTRS*ALSEIWLHCLG Trigger: TCCAAGGCAGTGGAGCCATATCTCTGAAAGTGCCAAAGACCTAGTACGCCGCATGCTGATGCTGGATCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128012.2 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | CAGGATCCAGCATCAGCATGCGGCGTACTAGGTCTTTaGCACTTTCAGAGATATGGCTCCACTGCCTTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: QDPASACGVLGL*HFQRYGSTALD Trigger: ATCCAAGGCAGTGGAGCCATATCTCTGAAAGTGCCAAAGACCTAGTACGCCGCATGCTGATGCTGGATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128012.2 ENSMUST00000156096.8 |
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| CDS GCA 72 bp | TGGCCTGCTGCTCTTGTTTGGTCTTCTCCATGGCAATaGAAGCTACTCGCCATTCCTGAAGTTCAGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: WPAALVWSSPWQ*KLLAIPEVQEK Trigger: CTTCTCCTGAACTTCAGGAATGGCGAGTAGCTTGCATTGCCATGGAGAAGACCAAACAAGAGCAGCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS GCA 72 bp | TGGCGCCGCAATGAAGACAACAAAAGGAGCAAACTCTaGAGTCCTCAGGACCTTCAGTGCCTTTCCAAAACG | + |
|
Preference number: 6 (lower is better) Translates to: WRRNEDNKRSKL*SPQDLQCLSKT Trigger: CGTTTTGGAAAGGCACTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTTGTTGTCTTCATTGCGGCGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115435.9 |
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| CDS CCA 72 bp | TACAGCTGGCCTGCTGCTCTTGTTTGGTCTTCTCCATaGCAATGCAAGCTACTCGCCATTCCTGAAGTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: YSWPAALVWSSP*QCKLLAIPEVQ Trigger: CTGAACTTCAGGAATGGCGAGTAGCTTGCATTGCCATGGAGAAGACCAAACAAGAGCAGCAGGCCAGCTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | ATGATGTCACCAACTCGGAACCGGATGCCAGCTTCTTaGCAGGGGATGAGGTCATCCTTGGCTGGATCATAT | + |
|
Preference number: 6 (lower is better) Translates to: MMSPTRNRMPAS*QGMRSSLAGSY Trigger: ATATGATCCAGCCAAGGATGACCTCATCCCCTGCAAAGAAGCTGGCATCCGGTTCCGAGTTGGTGACATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | GCCCCTGCTCATGGATTTTCCGAATGGTCTCCAGTTTaGTCCCGTACATTGCATCCTCATGGCTGCCATACT | + |
|
Preference number: 6 (lower is better) Translates to: APAHGFSEWSPV*SRTLHPHGCHT Trigger: AGTATGGCAGCCATGAGGATGCAATGTACGGGACAAAACTGGAGACCATTCGGAAAATCCATGAGCAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | CATCCGTGTTCTTTTGGAACTGTACCAGCCGAACTCTaGTCACATTCTCCATGTCCATGTCTCCGTTTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HPCSFGTVPAEL*SHSPCPCLRLH Trigger: GTGCAAACGGAGACATGGACATGGAGAATGTGACCAGAGTTCGGCTGGTACAGTTCCAAAAGAACACGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | CAAGTCCTCACAGGACGAAGACTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAATACTCCCTCGCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: QVLTGRRLSAVA*HNLEGNTPSHF Trigger: GAAATGCGAGGGAGTATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAGTCTTCGTCCTGTGAGGACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | GTGCTCTTACATAGATCTGTCGTCCTTTTGGTTGGGTaGTTGATGGCAAGTCCTCACAGGACGAAGACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLLHRSVVLLVG*LMASPHRTKTE Trigger: CTCAGTCTTCGTCCTGTGAGGACTTGCCATCAACCACCCAACCAAAAGGACGACAGATCTATGTAAGAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | TTTCTTGCCAAACCAAGTACAGCTGGCCTGCTGCTCTaGTTTGGTCTTCTCCATGGCAATGCAAGCTACTCG | + |
|
Preference number: 6 (lower is better) Translates to: FLAKPSTAGLLL*FGLLHGNASYS Trigger: CGAGTAGCTTGCATTGCCATGGAGAAGACCAAACAAGAGCAGCAGGCCAGCTGTACTTGGTTTGGCAAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | CTCTTACATAGATCTGTCGTCCTTTTGGTTGGGTGGTaGATGGCAAGTCCTCACAGGACGAAGACTGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLHRSVVLLVGW*MASPHRTKTEC Trigger: GCACTCAGTCTTCGTCCTGTGAGGACTTGCCATCAACCACCCAACCAAAAGGACGACAGATCTATGTAAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000115436.9 ENSMUST00000156096.8 |
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| CDS CAA 90 bp | TCGCAATCAGCCCCTGCTCATGGATTTTCCGAATGGTCTCCAGTTTaGTCCCGTACATTGCATCCTCATGGCTGCCATACTCCAAGTATT | + |
|
Preference number: 6 (lower is better) Translates to: SQSAPAHGFSEWSPV*SRTLHPHGCHTPSI Trigger: AATACTTGGAGTATGGCAGCCATGAGGATGCAATGTACGGGACAAAACTGGAGACCATTCGGAAAATCCATGAGCAGGGGCTGATTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | ATCTCTCTCACAGGACGAAGACTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAATACTCCCTCGCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ISLTGRRLSAVA*HNLEGNTPSHF Trigger: GAAATGCGAGGGAGTATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAGTCTTCGTCCTGTGAGAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033321.11 ENSMUST00000115438.10 |
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| CDS GCA 72 bp | ATAACGATCCCGCTCCTTAAGCCATGGGTGATTCAGTaGTTCATAAACAGTGATCCTTTCAGCAGGATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ITIPLLKPWVIQ*FINSDPFSRIQ Trigger: CTGGATCCTGCTGAAAGGATCACTGTTTATGAAGCACTGAATCACCCATGGCTTAAGGAGCGGGATCGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128012.2 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | TTCAAAGTGATTCCCATTGGCTCATCCGTGTTCTTTTaGAACTGTACCAGCCGAACTCTGGTCACATTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FKVIPIGSSVFF*NCTSRTLVTFS Trigger: GGAGAATGTGACCAGAGTTCGGCTGGTACAGTTCCAAAAGAACACGGATGAGCCAATGGGAATCACTTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | ATAGATCTCACAGGACGAAGACTGAGTGCGGTAGCTTaGCACAATCTTGAAGGTAATACTCCCTCGCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: IDLTGRRLSAVA*HNLEGNTPSHF Trigger: GAAATGCGAGGGAGTATTACCTTCAAGATTGTGCCAAGCTACCGCACTCAGTCTTCGTCCTGTGAGATCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139735.3 |
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| CDS CAA 72 bp | GAACTCTGGTCACATTCTCCATGTCCATGTCTCCGTTaGCACTTTCTGGAGAATCACCGTTTAAATAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ELWSHSPCPCLR*HFLENHRLNRG Trigger: CCCCCTATTTAAACGGTGATTCTCCAGAAAGTGCAAACGGAGACATGGACATGGAGAATGTGACCAGAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CAA 90 bp | CCTGCTCATGGATTTTCCGAATGGTCTCCAGTTTTGTCCCGTACATaGCATCCTCATGGCTGCCATACTCCAAGTATTCGTTATTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: PAHGFSEWSPVLSRT*HPHGCHTPSIRYLR Trigger: TCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGATGCAATGTACGGGACAAAACTGGAGACCATTCGGAAAATCCATGAGCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS TCA 72 bp | AATCACCGTTTAAATAGGGGGAAGTCGGGGGAGGTGTaGCCCTTAATGCTTCATCACTGTAAACTTCATGTG | + |
|
Preference number: 6 (lower is better) Translates to: NHRLNRGKSGEV*PLMLHHCKLHV Trigger: CACATGAAGTTTACAGTGATGAAGCATTAAGGGTCACACCTCCCCCGACTTCCCCCTATTTAAACGGTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS GCA 72 bp | GATTTTCCGAATGGTCTCCAGTTTTGTCCCGTACATTaGATCCTCATGGCTGCCATACTCCAAGTATTCGTT | + |
|
Preference number: 6 (lower is better) Translates to: DFPNGLQFCPVH*ILMAAILQVFV Trigger: AACGAATACTTGGAGTATGGCAGCCATGAGGATGCAATGTACGGGACAAAACTGGAGACCATTCGGAAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS GCA 72 bp | AAAAGGAGCAAACTCTGCAGTCCTCAGGACCTTCAGTaGCTTTCCAAAACGTGGCAAATCTGTACAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: KRSKLCSPQDLQ*LSKTWQICTSH Trigger: ATGACTTGTACAGATTTGCCACGTTTTGGAAAGGCACTGAAGGTCCTGAGGACTGCAGAGTTTGCTCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115435.9 |
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| CDS CAA 72 bp | TTTCAAAGTGATTCCCATTGGCTCATCCGTGTTCTTTaGGAACTGTACCAGCCGAACTCTGGTCACATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FQSDSHWLIRVL*ELYQPNSGHIL Trigger: GAGAATGTGACCAGAGTTCGGCTGGTACAGTTCCAAAAGAACACGGATGAGCCAATGGGAATCACTTTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | GGGGATGAGGTCATCCTTGGCTGGATCATATTCAAATaGTGCTCTTACATAGATCTCACAGGACGAAGACTG | + |
|
Preference number: 6 (lower is better) Translates to: GDEVILGWIIFK*CSYIDLTGRRL Trigger: CAGTCTTCGTCCTGTGAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139735.3 |
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| CDS TCA 72 bp | TCCAACAGCTCTACAATGTGTGGATGCTTCAGCATATaGCAGATACTGGCTTCCCGCTTTAGATCTTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: SNSSTMCGCFSI*QILASRFRSSV Trigger: TACAGAAGATCTAAAGCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCCACACATTGTAGAGCTGTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS TCA 72 bp | AAGCTACTCGCCATTCCTGAAGTTCAGGAGAAGGAATaGGACCTGCAGTTCCATTTTTGGAGTTTTCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: KLLAIPEVQEKE*DLQFHFWSFPV Trigger: AACTGGAAAACTCCAAAAATGGAACTGCAGGTCTCATTCCTTCTCCTGAACTTCAGGAATGGCGAGTAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | CTACAATGTGTGGATGCTTCAGCATATGACAGATACTaGCTTCCCGCTTTAGATCTTCTGTACTTAACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQCVDASAYDRY*LPALDLLYLTL Trigger: CAGGGTTAAGTACAGAAGATCTAAAGCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCCACACATTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | TTCCAATACCTCTTTGGCTCTCTGTACTGCATCACTTaGAGGATTCCTGATTTGTGGCGAAGACTTTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: FQYLFGSLYCIT*RIPDLWRRLCV Trigger: AACACAAAGTCTTCGCCACAAATCAGGAATCCTCCAAGTGATGCAGTACAGAGAGCCAAAGAGGTATTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CCA 72 bp | ATGGTCTCCAGTTTTGTCCCGTACATTGCATCCTCATaGCTGCCATACTCCAAGTATTCGTTATTTGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: MVSSFVPYIASS*LPYSKYSLFEM Trigger: CATCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGATGCAATGTACGGGACAAAACTGGAGACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS CAA 90 bp | TACCTCTTTGGCTCTCTGTACTGCATCACTTGGAGGATTCCTGATTaGTGGCGAAGACTTTGTGTTAATTTTGTCATACAGATCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: YLFGSLYCITWRIPD*WRRLCVNFVIQIQQ Trigger: CTGCTGGATCTGTATGACAAAATTAACACAAAGTCTTCGCCACAAATCAGGAATCCTCCAAGTGATGCAGTACAGAGAGCCAAAGAGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS TCA 72 bp | TCCAACAGCTCTACAATGTGTGGATGCTTCAGCATATaGCAGATACTGGCTTCCCGCTTTAGATTTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: SNSSTMCGCFSI*QILASRFRFEI Trigger: GATTTCAAATCTAAAGCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCCACACATTGTAGAGCTGTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124710.2 |
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| CDS GCA 72 bp | TCTCCAGTTTTGTCCCGTACATTGCATCCTCATGGCTaGCATACTCCAAGTATTCGTTATTTGAGATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SPVLSRTLHPHG*HTPSIRYLRCL Trigger: AAGACATCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGATGCAATGTACGGGACAAAACTGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS GCA 72 bp | GATGAGGTCATCCTTGGCTGGATCATATTCAAATTGTaGTCTTACATAGATCTGTCGTCCTTTTGGTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: DEVILGWIIFKL*SYIDLSSFWLG Trigger: ACCCAACCAAAAGGACGACAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS GCA 72 bp | GATGAGGTCATCCTTGGCTGGATCATATTCAAATTGTaGTCTTACATAGATCTCACAGGACGAAGACTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: DEVILGWIIFKL*SYIDLTGRRLS Trigger: ACTCAGTCTTCGTCCTGTGAGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139735.3 |
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| CDS CAA 72 bp | ACAATTTTTACAGCAAATTGTTGCCCAGTTTCTCTGTaGATACATCGCCGTACAACACTGAAGGGACCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TIFTANCCPVSL*IHRRTTLKGPL Trigger: CAAGGGTCCCTTCAGTGTTGTACGGCGATGTATCAACAGAGAAACTGGGCAACAATTTGCTGTAAAAATTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000124710.2 |
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| CDS CCA 72 bp | CTACAATGTGTGGATGCTTCAGCATATGACAGATACTaGCTTCCCGCTTTAGATTTGAAATCCATCTCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LQCVDASAYDRY*LPALDLKSISY Trigger: GTAAGAGATGGATTTCAAATCTAAAGCGGGAAGCCAGTATCTGTCATATGCTGAAGCATCCACACATTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124710.2 |
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| CDS GCA 72 bp | AATTTCGTTGTTGATAATTGTGAGATCGAAGTAGTGTaGATATGTTCTCTGCAAGACATCGGACTCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NFVVDNCEIEVV*ICSLQDIGLLL Trigger: CAGAAGGAGTCCGATGTCTTGCAGAGAACATATGCACACTACTTCGATCTCACAATTATCAACAACGAAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115435.9 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | GGGGATGAGGTCATCCTTGGCTGGATCATATTCAAATaGTGCTCTTACATAGATCGAAACAGAATTGTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: GDEVILGWIIFK*CSYIDRNRIVS Trigger: ACTAACAATTCTGTTTCGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATCCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033321.11 |
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| CDS CAA 72 bp | CATCCTCATGGCTGCCATACTCCAAGTATTCGTTATTaGAGATGTCTTGCATCATTTGGTCATGAGATACAA | + |
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Preference number: 6 (lower is better) Translates to: HPHGCHTPSIRY*RCLASFGHEIQ Trigger: TTGTATCTCATGACCAAATGATGCAAGACATCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS TCA 72 bp | ATCCTCATGGCTGCCATACTCCAAGTATTCGTTATTTaGGATGTCTTGCATCATTTGGTCATGAGATACAAA | + |
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Preference number: 6 (lower is better) Translates to: ILMAAILQVFVI*DVLHHLVMRYK Trigger: TTTGTATCTCATGACCAAATGATGCAAGACATCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS GCA 72 bp | GATGAGGTCATCCTTGGCTGGATCATATTCAAATTGTaGTCTTACATAGATCGAAACAGAATTGTTAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: DEVILGWIIFKL*SYIDRNRIVSA Trigger: AGCACTAACAATTCTGTTTCGATCTATGTAAGAGCACAATTTGAATATGATCCAGCCAAGGATGACCTCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033321.11 |
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| CDS CAA 90 bp | CGTACATTGCATCCTCATGGCTGCCATACTCCAAGTATTCGTTATTaGAGATGTCTTGCATCATTTGGTCATGAGATACAAAGTAATAAT | + |
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Preference number: 6 (lower is better) Translates to: RTLHPHGCHTPSIRY*RCLASFGHEIQSNN Trigger: ATTATTACTTTGTATCTCATGACCAAATGATGCAAGACATCTCAAATAACGAATACTTGGAGTATGGCAGCCATGAGGATGCAATGTACG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000128095.3 ENSMUST00000139735.3 ENSMUST00000156096.8 |
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| CDS GCA 72 bp | AGCATCAGCTCGCTTTACGATTTCAAAACACAGATCTaGTCCATCCATAAATTCAAAAACCATGTAAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: SISSLYDFKTQI*SIHKFKNHVKH Trigger: ATGCTTTACATGGTTTTTGAATTTATGGATGGAGCAGATCTGTGTTTTGAAATCGTAAAGCGAGCTGATGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000124710.2 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | AGATCTTCTGTACTTAACCCTGGACTTGATGTGAACTaGGCTACATCAACAATTTTTACAGCAAATTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: RSSVLNPGLDVN*ATSTIFTANCC Trigger: GCAACAATTTGCTGTAAAAATTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGTTAAGTACAGAAGATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS CAA 72 bp | TTACCTTCTGTACTTAACCCTGGACTTGATGTGAACTaGGCTACATCAACAATTTTTACAGCAAATTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: LPSVLNPGLDVN*ATSTIFTANCC Trigger: GCAACAATTTGCTGTAAAAATTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGTTAAGTACAGAAGGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124710.2 |
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| CDS TCA 72 bp | GCTTTAGATCTTCTGTACTTAACCCTGGACTTGATGTaGACTTGGCTACATCAACAATTTTTACAGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: ALDLLYLTLDLM*TWLHQQFLQQI Trigger: AATTTGCTGTAAAAATTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGTTAAGTACAGAAGATCTAAAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033321.11 ENSMUST00000115436.9 ENSMUST00000115438.10 ENSMUST00000156096.8 |
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| CDS TCA 72 bp | ATCTCTTACCTTCTGTACTTAACCCTGGACTTGATGTaGACTTGGCTACATCAACAATTTTTACAGCAAATT | + |
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Preference number: 6 (lower is better) Translates to: ISYLLYLTLDLM*TWLHQQFLQQI Trigger: AATTTGCTGTAAAAATTGTTGATGTAGCCAAGTTCACATCAAGTCCAGGGTTAAGTACAGAAGGTAAGAGAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124710.2 |
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