Pregenerated sensors for CASD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015189Ensembl transcript IDs: ENSMUST00000015333.12, ENSMUST00000141359.2, ENSMUST00000153963.2, ENSMUST00000181734.8, ENSMUST00000204372.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGGTTAAAGACATAACAGTCTCTCATTCCACAGCACGGCACACGTaGCAGGGAAGAACACCGCAAGTCACTTCGGTACTAAGTTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: RVKDITVSHSTARHT*QGRTPQVTSVLSCL Trigger: CAGACAACTTAGTACCGAAGTGACTTGCGGTGTTCTTCCCTGTCACGTGTGCCGTGCTGTGGAATGAGAGACTGTTATGTCTTTAACCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| 3UTR-3UTR TCA 90 bp | CTCGCCACTCTCCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGCAAGCAGCTAGCTTCTaGATGAGAGTGAGAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: LATLQISTWFILPVSITMQAASF*MRVRGG Trigger: GCCACCTCTCACTCTCATTCAGAAGCTAGCTGCTTG...CATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTGGCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGAATTAAGAGGTGGCCGAGGCTaGCAACAGGAACCATCCACA | + |
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Preference number: 2 (lower is better) Translates to: HSPNQYMVYSSGEHYDELRGGRG*QQEPST Trigger: TGTGGATGGTTCCTGTTGTCAGCCTCGGCCACCTCT...TAATTCATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| 3UTR CAA 90 bp | TGCACTCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATaGGATATACACAGGGCTGATATATACAATCGCGCAAGTTCAACA | + |
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Preference number: 2 (lower is better) Translates to: CTLIRCILVHCVHFT*DIHRADIYNRASST Trigger: TGTTGAACTTGCGCGATTGTATATATCAGCCCTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGAGTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| 3UTR TCA 72 bp | GACATAACAGTCTCTCATTCCACAGCACGGCACACGTaGCAGGGAAGAACACCGCAAGTCACTTCGGTACTA | + |
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Preference number: 3 (lower is better) Translates to: DITVSHSTARHT*QGRTPQVTSVL Trigger: TAGTACCGAAGTGACTTGCGGTGTTCTTCCCTGTCACGTGTGCCGTGCTGTGGAATGAGAGACTGTTATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| 3UTR CCA 72 bp | TACGATGCATCCTGGTTCACTGTGTGCATTTCACATTaGATATACACAGGGCTGATATATACAATCGCGCAA | + |
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Preference number: 3 (lower is better) Translates to: YDASWFTVCISH*IYTGLIYTIAQ Trigger: TTGCGCGATTGTATATATCAGCCCTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| 3UTR CCA 72 bp | AAGGGTTTTCCACATGCACTCTTATACGATGCATCCTaGTTCACTGTGTGCATTTCACATTGGATATACACA | + |
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Preference number: 3 (lower is better) Translates to: KGFPHALLYDAS*FTVCISHWIYT Trigger: TGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGAGTGCATGTGGAAAACCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| 3UTR CCA 72 bp | AAATTCTACTACGGTCACACATTTCAATCAAAGATTTaGAACTTCATTATGCTGCACAGGTTCAGATCGATA | + |
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Preference number: 3 (lower is better) Translates to: KFYYGHTFQSKI*NFIMLHRFRSI Trigger: TATCGATCTGAACCTGTGCAGCATAATGAAGTTCCAAATCTTTGATTGAAATGTGTGACCGTAGTAGAATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CCA 90 bp | CTCGCCACTCTCCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGCGGCGGGACGCGAGGTaGCACGCTGCGAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LATLQISTWFILPVSITMRRDAR*HAASSS Trigger: GCTGCTGCTCGCAGCGTGCCACCTCGCGTCCCGCCG...CATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTGGCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR CCA 90 bp | TTGCCAAACTTTTTCTCCAAGAAATCTGCCGCTCGAGAGAAGGTATTCACACGACGGCGGGACGCGAGGTaGCACGCTGCGAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LPNFFSKKSAAREKVFTRRRDAR*HAASSS Trigger: GCTGCTGCTCGCAGCGTGCCACCTCGCGTCCCGCCG...TCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTGGAGAAAAAGTTTGGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS-3UTR GCA 90 bp | TTGCCAAACTTTTTCTCCAAGAAATCTGCCGCTCGAGAGAAGGTATTCACACGACGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LPNFFSKKSAAREKVFTRREVAR*EQQHGH Trigger: GTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCG...TCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTGGAGAAAAAGTTTGGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS-3UTR CCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCGGCGGGACGCGAGGTaGCACGCTGCGAGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQRRDAR*HAASSS Trigger: GCTGCTGCTCGCAGCGTGCCACCTCGCGTCCCGCCG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQREVAR*EQQHGH Trigger: GTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | GAGAGTGAGAGGTGGCCGAGGCTGACAACAGGAACCATCCACAGGCTTCACAACTGCAGTACACGTTCATaGGAATCATTGCACTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: ESERWPRLTTGTIHRLHNCSTRS*ESLHSC Trigger: ACAAGAGTGCAATGATTCTCATGAACGTGTACTGCA...GTTGTGAAGCCTGTGGATGGTTCCTGTTGTCAGCCTCGGCCACCTCTCACTCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR GCA 90 bp | CCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGAATTACATAGACGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PNQYMVYSSGEHYDELHRREVAR*EQQHGH Trigger: GTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCG...TCTATGTAATTCATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR CCA 90 bp | TTGCCAAACTTTTTCTCCAAGAAATCTGCCGCTCGAGAGAAGGTATTCACACGAACTGCTGCCCACACCTaGCTCCTCAAGCCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: LPNFFSKKSAAREKVFTRTAAHT*LLKPPP Trigger: AGGAGGTGGCTTGAGGAGCCAGGTGTGGGCAGCAGT...TCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTGGAGAAAAAGTTTGGCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS-3UTR TCA 90 bp | CTGAATGAGAGTGAGAGGTGGCCGAGGCTGACAACAGGAACCATCCACAGGCTTGTGGTGCTATGGAGGTaGTATTCATTTTATACTGAG | + |
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Preference number: 4 (lower is better) Translates to: LNESERWPRLTTGTIHRLVVLWR*YSFYTE Trigger: CTCAGTATAAAATGAATATCACCTCCATAGCACCAC...AAGCCTGTGGATGGTTCCTGTTGTCAGCCTCGGCCACCTCTCACTCTCATTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTCGGGTTTCCAGGGATaGGGACCAGGATGCCCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQSGFQG*GPGCPL Trigger: CAAGGGGCATCCTGGTCCTCATCCCTGGAAACCCGA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | CTGAATGAGAGTGAGAGGTGGCCGAGGCTGACAACAGGAACCATCCACAGGCTTAAAATCCACTTTAACTaGTGCAGCCTTGTCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: LNESERWPRLTTGTIHRLKIHFN*CSLVFK Trigger: TTTGAAGACAAGGCTGCATCAGTTAAAGTGGATTTT...AAGCCTGTGGATGGTTCCTGTTGTCAGCCTCGGCCACCTCTCACTCTCATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGAGAGGTGGCCGAGGCTaGCAACAGGAACCATCCACA | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQRGGRG*QQEPST Trigger: TGTGGATGGTTCCTGTTGTCAGCCTCGGCCACCTCT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TTGCCAAACTTTTTCTCCAAGAAATCTGCCGCTCGAGAGAAGGTATTCACACGACATTCTTGGTACTGCTaGCCACACCTGGCTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: LPNFFSKKSAAREKVFTRHSWYC*PHLAPQ Trigger: TTGAGGAGCCAGGTGTGGGCAGCAGTACCAAGAATG...TCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTGGAGAAAAAGTTTGGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS-3UTR TCA 90 bp | CTCGCCACTCTCCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGTGCCATTATGAATCTTaGTGGACCATGTGGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LATLQISTWFILPVSITMCHYES*WTMWLL Trigger: GAGCAGCCACATGGTCCATCAAGATTCATAATGGCA...CATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTGGCGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGATGCCCCTTGTGTCTaGTGCCAGCCAGATGTGGTA | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQDAPCV*CQPDVV Trigger: TACCACATCTGGCTGGCAGCAGACACAAGGGGCATC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGCTGCCAGCCAGATGTaGTACTGGCAGATGAACAGC | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQAASQM*YWQMNS Trigger: GCTGTTCATCTGCCAGTACCACATCTGGCTGGCAGC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCAAGCAGCTAGCTTCTaGATGAGAGTGAGAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQQAASF*MRVRGG Trigger: GCCACCTCTCACTCTCATTCAGAAGCTAGCTGCTTG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGAATGAGAGTGAGAGGTaGCCGAGGCTGACAACAGGA | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQNESER*PRLTTG Trigger: TCCTGTTGTCAGCCTCGGCCACCTCTCACTCTCATT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGATGGACCATGTGGCTaGTCCTGCTACAATCACATG | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQDGPCG*SCYNHM Trigger: CATGTGATTGTAGCAGGAGCAGCCACATGGTCCATC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CCA 90 bp | TTGCCAAACTTTTTCTCCAAGAAATCTGCCGCTCGAGAGAAGGTATTCACACGAAAGTTCTTTCATTCTTaGTACTGCTGCCCACACCTG | + |
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Preference number: 4 (lower is better) Translates to: LPNFFSKKSAAREKVFTRKFFHS*YCCPHL Trigger: CAGGTGTGGGCAGCAGTACCAAGAATGAAAGAACTT...TCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTGGAGAAAAAGTTTGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTGCCATTATGAATCTTaGTGGACCATGTGGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQCHYES*WTMWLL Trigger: GAGCAGCCACATGGTCCATCAAGATTCATAATGGCA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGAGGTCAGTGGTGATCTaGGAAATCTCATGTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQRSVVI*EISCAT Trigger: TGTGGCACATGAGATTTCTCAGATCACCACTGACCT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | CACTCTCCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGAATTAGATGGACCATGTGGCTaGTCCTGCTACAATCACATG | + |
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Preference number: 4 (lower is better) Translates to: HSPNQYMVYSSGEHYDELDGPCG*SCYNHM Trigger: CATGTGATTGTAGCAGGAGCAGCCACATGGTCCATC...TAATTCATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR CCA 90 bp | CTCGCCACTCTCCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGGGAACCATTAACTTCTaGATGCCAAAGAAAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: LATLQISTWFILPVSITMGTINF*MPKKIH Trigger: GTGGATTTTCTTTGGCATCCAGAAGTTAATGGTTCC...CATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTGGCGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR CCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGACAGACACAGATGGGTaGAGTTCGTTACACTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQTDTDG*SSLHSA Trigger: AGCAGAGTGTAACGAACTCCACCCATCTGTGTCTGT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCCTCAGTCCACACCTTaGTACATTGTTTCATGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQPQSTP*YIVSWN Trigger: GTTCCATGAAACAATGTATCAAGGTGTGGACTGAGG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGAATGGAGGATAAGATaGGGACTCCACCAAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQEWRIR*GLHQRM Trigger: CATTCTTTGGTGGAGTCCTCATCTTATCCTCCATTC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTGCACCCTGAGAATATaGCAAGAACCATATGCACAG | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQCTLRI*QEPYAQ Trigger: CTGTGCATATGGTTCTTGGCATATTCTCAGGGTGCA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCCTTCAGAAAGTATTTaGCGTCTCTGCAAAGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQPSESI*RLCKAR Trigger: TCTGGCTTTGCAGAGACGGCAAATACTTTCTGAAGG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGCAAAGCCAGATAAATaGAAGCAAACAGAACCCCAT | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQAKPDK*KQTEPH Trigger: ATGGGGTTCTGTTTGCTTTCATTTATCTGGCTTTGC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTGTTCCTTATCAGGATaGAGGCTACAATCTGTACCA | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQCSLSG*RLQSVP Trigger: TGGTACAGATTGTAGCCTTCATCCTGATAAGGAACA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGACCAGAACTCGAATGTaGATGTACACAGGCAGAAAT | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQTRTRM*MYTGRN Trigger: ATTTCTGCCTGTGTACATGCACATTCGAGTTCTGGT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTGTCTGAAACAGATATaGAGCCACCAGAACTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQCLKQI*SHQNSN Trigger: ATTCGAGTTCTGGTGGCTGCATATCTGTTTCAGACA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTCCATGATGGTCTCTTaGGCAATGAGTTTGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQSMMVS*AMSLET Trigger: TGTTTCCAAACTCATTGCCCAAGAGACCATCATGGA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCTCCAAATCAGTACATaGTTTATTCTTCCGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQLQIST*FILPVS Trigger: GCTCACCGGAAGAATAAACCATGTACTGATTTGGAG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTGCATCATACAACTGTaGGGTTGCCAAACTTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQCIIQL*GCQTFS Trigger: AGAAAAAGTTTGGCAACCTCACAGTTGTATGATGCA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGTGGTGCTATGGAGGTaGTATTCATTTTATACTGAG | + |
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Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQVVLWR*YSFYTE Trigger: CTCAGTATAAAATGAATATCACCTCCATAGCACCAC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGTTCATGAGAATCATTaGACTAGTTTCTCTGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQVHENH*TSFSAR Trigger: TCGAGCAGAGAAACTAGTGCAATGATTCTCATGAAC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCTGAGAAATCTCATGTaGCACACAAACGAAGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQLRNLM*HTNEDE Trigger: TTCATCTTCGTTTGTGTGGCACATGAGATTTCTCAG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGGAACCATTAACTTCTaGATGCCAAAGAAAATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQGTINF*MPKKIH Trigger: GTGGATTTTCTTTGGCATCCAGAAGTTAATGGTTCC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGAAAATCCACTTTAACTaGTGCAGCCTTGTCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQKIHFN*CSLVFK Trigger: TTTGAAGACAAGGCTGCATCAGTTAAAGTGGATTTT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGTTGGAAATTTTGTTTaGAAAGAGTGGTTCACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQVGNFV*KEWFTL Trigger: AAGGGTGAACCACTCTTTTCAAACAAAATTTCCAAC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGAGTCTTGATTTATCTTaGATGGAGGATAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQSLDLS*MEDKMR Trigger: CCTCATCTTATCCTCCATTCAAGATAAATCAAGACT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCTTCATAAACAGGTTTaGACGGTCACACATATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQLHKQV*TVTHIE Trigger: TTCTATATGTGTGACCGTGCAAACCTGTTTATGAAG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR GCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGAAAGATCTTCTCAAATaGACCCTGAGAATATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQKDLLK*TLRICQ Trigger: TTGGCATATTCTCAGGGTGCATTTGAGAAGATCTTT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR TCA 90 bp | CCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGAATTACATAGATGCATCATACAACTGTaGGGTTGCCAAACTTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNQYMVYSSGEHYDELHRCIIQL*GCQTFS Trigger: AGAAAAAGTTTGGCAACCTCACAGTTGTATGATGCA...TCTATGTAATTCATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR CCA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGTAATAGAACTGATATaGTCGATCCATTACGATACA | + |
|
Preference number: 4 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQVIELI*SIHYDT Trigger: TGTATCGTAATGGATCGACCATATCAGTTCTATTAC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| 3UTR CAA 72 bp | AAAATTCTACTACGGTCACACATTTCAATCAAAGATTaGGAACTTCATTATGCTGCACAGGTTCAGATCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KILLRSHISIKD*ELHYAAQVQID Trigger: ATCGATCTGAACCTGTGCAGCATAATGAAGTTCCAAATCTTTGATTGAAATGTGTGACCGTAGTAGAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS GCA 90 bp | CCTCAAGCCACCTCCTCGGTAGCGGCGGGACGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCACCAGCGCCAGCACCTTGGCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PQATSSVAAGREVAR*EQQHGHQRQHLGAP Trigger: AGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCGTCCCGCCGCTACCGAGGAGGTGGCTTGAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS GCA 90 bp | ACACGAATCATTGCCTCGGTAGCGGCGGGACGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCACCAGCGCCAGCACCTTGGCGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRIIASVAAGREVAR*EQQHGHQRQHLGAP Trigger: AGGAGCGCCAAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCGTCCCGCCGCTACCGAGGCAATGATTCGTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015333.12 ENSMUST00000141359.2 ENSMUST00000181734.8 |
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| CDS-3UTR CAA 90 bp | CTCGCCACTCTCCAAATCAGTACATGGTTTATTCTTCCGGTGAGCATTACGATGACCAGCGCCAGCACCTaGGCGCTCCTCACGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LATLQISTWFILPVSITMTSAST*ALLTLK Trigger: CTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGT...CATCGTAATGCTCACCGGAAGAATAAACCATGTACTGATTTGGAGAGTGGCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR CAA 90 bp | TTGCCAAACTTTTTCTCCAAGAAATCTGCCGCTCGAGAGAAGGTATTCACACGAACCAGCGCCAGCACCTaGGCGCTCCTCACGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPNFFSKKSAAREKVFTRTSAST*ALLTLK Trigger: CTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGT...TCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTGGAGAAAAAGTTTGGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGACCAGCGCCAGCACCTaGGCGCTCCTCACGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQTSAST*ALLTLK Trigger: CTTCAGCGTGAGGAGCGCCAAGGTGCTGGCGCTGGT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | CTGAATGAGAGTGAGAGGTGGCCGAGGCTGACAACAGGAACCATCCACAGGCTTCATACAACTGTGAGGTaGCCAAACTTTTTCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LNESERWPRLTTGTIHRLHTTVR*PNFFSK Trigger: CTTGGAGAAAAAGTTTGGCAACCTCACAGTTGTATG...AAGCCTGTGGATGGTTCCTGTTGTCAGCCTCGGCCACCTCTCACTCTCATTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGGACCAGGATGCCCCTaGTGTCTGCTGCCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQGPGCP*CLLPAR Trigger: TCTGGCTGGCAGCAGACACAAGGGGCATCCTGGTCC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS TCA 90 bp | CAAACAGAACCCCATGGAAGACAACGTAGCGGTCTAGCCTCCACCTaGACCACCATTCATACACGCTCCCTTCTAGTTCAAAACATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QTEPHGRQRSGLAST*TTIHTRSLLVQNIW Trigger: CCAAATGTTTTGAACTAGAAGGGAGCGTGTATGAATGGTGGTTCAGGTGGAGGCTAGACCGCTACGTTGTCTTCCATGGGGTTCTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS TCA 90 bp | GGGTTATCTTTAGGAATAACGACCTGCGCGAGGTCAGTGGTGATCTaGGAAATCTCATGTGCCACACAAACGAAGATGAACGTGCTGACG | + |
|
Preference number: 5 (lower is better) Translates to: GLSLGITTCARSVVI*EISCATQTKMNVLT Trigger: CGTCAGCACGTTCATCTTCGTTTGTGTGGCACATGAGATTTCTCAGATCACCACTGACCTCGCGCAGGTCGTTATTCCTAAAGATAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | GAGAGTGAGAGGTGGCCGAGGCTGACAACAGGAACCATCCACAGGCTTCACAACTTAACTGATGCAGCCTaGTCTTCAAAAGGAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ESERWPRLTTGTIHRLHNLTDAA*SSKGMF Trigger: AAACATTCCTTTTGAAGACAAGGCTGCATCAGTTAA...GTTGTGAAGCCTGTGGATGGTTCCTGTTGTCAGCCTCGGCCACCTCTCACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181734.8 |
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| CDS TCA 90 bp | TCATTTTATACTGAGCTAGTGCCTCCTCGCTGCCATTATGAATCTTaGTGGACCATGTGGCTGCTCCTGCTACAATCACATGGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SFYTELVPPRCHYES*WTMWLLLLQSHGAS Trigger: TGAAGCCCCATGTGATTGTAGCAGGAGCAGCCACATGGTCCATCAAGATTCATAATGGCAGCGAGGAGGCACTAGCTCAGTATAAAATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015333.12 ENSMUST00000141359.2 ENSMUST00000181734.8 |
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| CDS GCA 90 bp | AATAACGACCTGCGCGAGGTCAGTGGTGATCTGAGAAATCTCATGTaGCACACAAACGAAGATGAACGTGCTGACGATGATGTTGAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NNDLREVSGDLRNLM*HTNEDERADDDVEC Trigger: ACACTCAACATCATCGTCAGCACGTTCATCTTCGTTTGTGTGGCACATGAGATTTCTCAGATCACCACTGACCTCGCGCAGGTCGTTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS GCA 90 bp | ACAGAACCCCATGGAAGACAACCTGAGAATATGCCAAGAACCATATaGACAGCAGCAGCAAGCCTAGTTTCAACAGTAAGCCGAGATACC | + |
|
Preference number: 5 (lower is better) Translates to: TEPHGRQPENMPRTI*TAAASLVSTVSRDT Trigger: GGTATCTCGGCTTACTGTTGAAACTAGGCTTGCTGCTGCTGTGCATATGGTTCTTGGCATATTCTCAGGTTGTCTTCCATGGGGTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204372.2 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGGTGCTGACGATGATGTaGAGTGTCGGGTTTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQVLTMM*SVGFPG Trigger: CCCTGGAAACCCGACACTCAACATCATCGTCAGCAC...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS CCA 90 bp | GATTCAGGAAGGTGTAAGCCATCCAGAGACTCCATGATGGTCTCTTaGGCAATGAGTTTGGAAACACTGAACATCTTCACATTGGACTTA | + |
|
Preference number: 5 (lower is better) Translates to: DSGRCKPSRDSMMVS*AMSLETLNIFTLDL Trigger: TAAGTCCAATGTGAAGATGTTCAGTGTTTCCAAACTCATTGCCCAAGAGACCATCATGGAGTCTCTGGATGGCTTACACCTTCCTGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCAGGCAGAAATGTGCTaGCTCCCGAGATGTGATAGA | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQQAEMC*LPRCDR Trigger: TCTATCACATCTCGGGAGCAAGCACATTTCTGCCTG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | TTGCCAAACTTTTTCTCCAAGAAATCTGCCGCTCGAGAGAAGGTATTCACACGAAAAGTTCTTTCATTCTaGGTACTGCTGCCCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: LPNFFSKKSAAREKVFTRKVLSF*VLLPTP Trigger: AGGTGTGGGCAGCAGTACCAAGAATGAAAGAACTTT...TCGTGTGAATACCTTCTCTCGAGCGGCAGATTTCTTGGAGAAAAAGTTTGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCTGAACATCTTCACATaGGACTTAGAGGTCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQLNIFT*DLEVLV Trigger: CACCAGGACCTCTAAGTCCAATGTGAAGATGTTCAG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCTCCATGATGGTCTCTaGGGCAATGAGTTTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQLHDGL*GNEFGN Trigger: GTTTCCAAACTCATTGCCCAAGAGACCATCATGGAG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGCATACAACTGTGAGGTaGCCAAACTTTTTCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQHTTVR*PNFFSK Trigger: CTTGGAGAAAAAGTTTGGCAACCTCACAGTTGTATG...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTTAACTGATGCAGCCTaGTCTTCAAAAGGAATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQLTDAA*SSKGMF Trigger: AAACATTCCTTTTGAAGACAAGGCTGCATCAGTTAA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGTCTAGTTCAAAACATTaGGAAAGTGGCCATAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQSSSKH*ESGHRE Trigger: TTCTCTATGGCCACTTTCCAAATGTTTTGAACTAGA...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS-3UTR CAA 90 bp | TCTTATACGATGCATCCTGGTTCACTGTGTGCATTTCACATTGGATATACACAGAGTTGGAAATTTTGTTaGAAAAGAGTGGTTCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SYTMHPGSLCAFHIGYTQSWKFC*KRVVHP Trigger: AGGGTGAACCACTCTTTTCAAACAAAATTTCCAACT...CTGTGTATATCCAATGTGAAATGCACACAGTGAACCAGGATGCATCGTATAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS GCA 72 bp | ACCTCCTCGGTAGCGGCGGGACGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCACCAGCGCCAGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: TSSVAAGREVAR*EQQHGHQRQHL Trigger: AAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCGTCCCGCCGCTACCGAGGAGGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153963.2 |
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| CDS GCA 72 bp | ATTGCCTCGGTAGCGGCGGGACGCGAGGTGGCACGCTaGGAGCAGCAGCACGGCCACCAGCGCCAGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: IASVAAGREVAR*EQQHGHQRQHL Trigger: AAGGTGCTGGCGCTGGTGGCCGTGCTGCTGCTCGCAGCGTGCCACCTCGCGTCCCGCCGCTACCGAGGCAAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015333.12 ENSMUST00000141359.2 ENSMUST00000181734.8 |
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| CDS TCA 72 bp | CCCCATGGAAGACAACGTAGCGGTCTAGCCTCCACCTaGACCACCATTCATACACGCTCCCTTCTAGTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PHGRQRSGLAST*TTIHTRSLLVQ Trigger: TTGAACTAGAAGGGAGCGTGTATGAATGGTGGTTCAGGTGGAGGCTAGACCGCTACGTTGTCTTCCATGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS CAA 90 bp | ATCTCATGTGCCACACAAACGAAGATGAACGTGCTGACGATGATGTaGAGTGTCGGGTTTCCAGGGATGAGGACCAGGATGCCCCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: ISCATQTKMNVLTMM*SVGFPGMRTRMPLV Trigger: CACAAGGGGCATCCTGGTCCTCATCCCTGGAAACCCGACACTCAACATCATCGTCAGCACGTTCATCTTCGTTTGTGTGGCACATGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS TCA 72 bp | ACTGAGCTAGTGCCTCCTCGCTGCCATTATGAATCTTaGTGGACCATGTGGCTGCTCCTGCTACAATCACAT | + |
|
Preference number: 6 (lower is better) Translates to: TELVPPRCHYES*WTMWLLLLQSH Trigger: ATGTGATTGTAGCAGGAGCAGCCACATGGTCCATCAAGATTCATAATGGCAGCGAGGAGGCACTAGCTCAGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015333.12 ENSMUST00000141359.2 ENSMUST00000181734.8 |
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| CDS GCA 72 bp | CTGCGCGAGGTCAGTGGTGATCTGAGAAATCTCATGTaGCACACAAACGAAGATGAACGTGCTGACGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LREVSGDLRNLM*HTNEDERADDD Trigger: ATCATCGTCAGCACGTTCATCTTCGTTTGTGTGGCACATGAGATTTCTCAGATCACCACTGACCTCGCGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
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| CDS GCA 72 bp | TCTCAAATGCACCCTGAGAATATGCCAAGAACCATATaGACAGCAGCAGCAAGCCTAGTTTCAACAGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: SQMHPENMPRTI*TAAASLVSTVS Trigger: GCTTACTGTTGAAACTAGGCTTGCTGCTGCTGTGCATATGGTTCTTGGCATATTCTCAGGGTGCATTTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
||
| CDS GCA 72 bp | CATGGAAGACAACCTGAGAATATGCCAAGAACCATATaGACAGCAGCAGCAAGCCTAGTTTCAACAGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HGRQPENMPRTI*TAAASLVSTVS Trigger: GCTTACTGTTGAAACTAGGCTTGCTGCTGCTGTGCATATGGTTCTTGGCATATTCTCAGGTTGTCTTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204372.2 |
||
| CDS CCA 72 bp | AGGTGTAAGCCATCCAGAGACTCCATGATGGTCTCTTaGGCAATGAGTTTGGAAACACTGAACATCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: RCKPSRDSMMVS*AMSLETLNIFT Trigger: TGTGAAGATGTTCAGTGTTTCCAAACTCATTGCCCAAGAGACCATCATGGAGTCTCTGGATGGCTTACACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015333.12 |
||
| CDS CCA 72 bp | ATGAAGGCTACAATCTGTACCACAGACACAGATGGGTaGAGTTCGTTACACTCTGCTTTGTTCTTACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MKATICTTDTDG*SSLHSALFLQL Trigger: CAGCTGTAAGAACAAAGCAGAGTGTAACGAACTCCACCCATCTGTGTCTGTGGTACAGATTGTAGCCTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015333.12 ENSMUST00000204372.2 |
||
| CDS CCA 72 bp | CAGGATGAAGGCTACAATCTGTACCACAGACACAGATaGGTGGAGTTCGTTACACTCTGCTTTGTTCTTACA | + |
|
Preference number: 6 (lower is better) Translates to: QDEGYNLYHRHR*VEFVTLCFVLT Trigger: TGTAAGAACAAAGCAGAGTGTAACGAACTCCACCCATCTGTGTCTGTGGTACAGATTGTAGCCTTCATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015333.12 ENSMUST00000204372.2 |
||
| CDS TCA 72 bp | TCTTGGCCAATTTTTCTAAGAGTGGTGCTATGGAGGTaGTATTCATTTTATACTGAGCTAGTGCCTCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: SWPIFLRVVLWR*YSFYTELVPPR Trigger: GCGAGGAGGCACTAGCTCAGTATAAAATGAATATCACCTCCATAGCACCACTCTTAGAAAAATTGGCCAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015333.12 ENSMUST00000141359.2 ENSMUST00000181734.8 |
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