Pregenerated sensors for CASC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043541Ensembl transcript IDs: ENSMUST00000060797.10, ENSMUST00000111728.8, ENSMUST00000204105.2
Found 156 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCGGTGCCCTCCCTGAGGGCCTCCGAGAACTTGTCGTTCTCTTCCTaGATCTTGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGC | + |
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Preference number: 1 (lower is better) Translates to: SVPSLRASENLSFSS*ILSICALSPLNMRS Trigger: GCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCGGAGGCCCTCAGGGAGGGCACCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR GCA 90 bp | AGGGCCTCCGAGAACTTGTCGTTCTCTTCCTGCATCTTGAGCATCTaGGCTCTGTCACCACTGAACATGAGGAGCGACCAGGTATGGTGC | + |
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Preference number: 1 (lower is better) Translates to: RASENLSFSSCILSI*ALSPLNMRSDQVWC Trigger: GCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCGGAGGCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR CCA 90 bp | AGCATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGGTATaGTGCTCTGTTTCTTCTGACAGTTGTTCCCTCACCCAGCTTGCA | + |
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Preference number: 1 (lower is better) Translates to: SICALSPLNMRSDQV*CSVSSDSCSLTQLA Trigger: TGCAAGCTGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR GCA 90 bp | ATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGGTATGGTaGTCTGTTTCTTCTGACAGTTGTTCCCTCACCCAGCTTGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: ICALSPLNMRSDQVW*SVSSDSCSLTQLAD Trigger: ATCTGCAAGCTGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR TCA 90 bp | GCAGTGTGGCTGGAACGCCTGGTGCTCTTAAATCACTTTAGCGGCTaGCTGGAAAGATACCTGATTCCTCTCGGTATAAGGGTCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: AVWLERLVLLNHFSG*LERYLIPLGIRVHH Trigger: ATGGTGGACCCTTATACCGAGAGGAATCAGGTATCTTTCCAGTCAGCCGCTAAAGTGATTTAAGAGCACCAGGCGTTCCAGCCACACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| 3UTR CAA 90 bp | CCCTCCCTGAGGGCCTCCGAGAACTTGTCGTTCTCTTCCTGCATCTaGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAG | + |
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Preference number: 2 (lower is better) Translates to: PSLRASENLSFSSCI*SICALSPLNMRSDQ Trigger: CTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCGGAGGCCCTCAGGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGAGTGGAACTCGGTGCCCTCCCTGAGGGCCTCCGAGAACTTGTCGTTCTCTGTGCTCTGTTTCTTCTaGCAGTTGTTCCCTCACCCA | + |
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Preference number: 2 (lower is better) Translates to: VEWNSVPSLRASENLSFSVLCFF*QLFPHP Trigger: TGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCAC...AGAGAACGACAAGTTCTCGGAGGCCCTCAGGGAGGGCACCGAGTTCCACTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR-3UTR GCA 90 bp | CTGACCCTCTCCATTGCCACGGGGGAGGCGAAGTCCTTCATCATGTGGTACAAGTGCATCTTGAGCATCTaGGCTCTGTCACCACTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LTLSIATGEAKSFIMWYKCILSI*ALSPLN Trigger: GTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCA...CTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCAATGGAGAGGGTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCACGGGGGAGGCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCAGGAGCGACCAGGTATaGTGCTCTGTTTCTTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: CHGGGEVLHHVVQGGVELRSDQV*CSVSSD Trigger: GTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCT...GAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR CCA 72 bp | GAGGCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTaGAACTCGGTGCCCTCCCTGAGGGCCTCCGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: EAKSFIMWYKVE*NSVPSLRASEN Trigger: GTTCTCGGAGGCCCTCAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR CCA 72 bp | TCCATTGCCACGGGGGAGGCGAAGTCCTTCATCATGTaGTACAAGGTGGAGTGGAACTCGGTGCCCTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: SIATGEAKSFIM*YKVEWNSVPSL Trigger: CAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCAATGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR GCA 72 bp | TCCCTGAGGGCCTCCGAGAACTTGTCGTTCTCTTCCTaGATCTTGAGCATCTGCGCTCTGTCACCACTGAAC | + |
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Preference number: 3 (lower is better) Translates to: SLRASENLSFSS*ILSICALSPLN Trigger: GTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCGGAGGCCCTCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR GCA 72 bp | CTGTCACCACTGAACATGAGGAGCGACCAGGTATGGTaGTCTGTTTCTTCTGACAGTTGTTCCCTCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: LSPLNMRSDQVW*SVSSDSCSLTQ Trigger: CTGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR GCA 72 bp | GAGAACTTGTCGTTCTCTTCCTGCATCTTGAGCATCTaGGCTCTGTCACCACTGAACATGAGGAGCGACCAG | + |
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Preference number: 3 (lower is better) Translates to: ENLSFSSCILSI*ALSPLNMRSDQ Trigger: CTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR CCA 72 bp | GCTCTGTCACCACTGAACATGAGGAGCGACCAGGTATaGTGCTCTGTTTCTTCTGACAGTTGTTCCCTCACC | + |
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Preference number: 3 (lower is better) Translates to: ALSPLNMRSDQV*CSVSSDSCSLT Trigger: GGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR TCA 72 bp | CTGGAACGCCTGGTGCTCTTAAATCACTTTAGCGGCTaGCTGGAAAGATACCTGATTCCTCTCGGTATAAGG | + |
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Preference number: 3 (lower is better) Translates to: LERLVLLNHFSG*LERYLIPLGIR Trigger: CCTTATACCGAGAGGAATCAGGTATCTTTCCAGTCAGCCGCTAAAGTGATTTAAGAGCACCAGGCGTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| 3UTR CCA 72 bp | TATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTaGCTGGAACGCCTGGTGCTCTTAAATCACTTTAGC | + |
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Preference number: 3 (lower is better) Translates to: YPNKDHSNLCAV*LERLVLLNHFS Trigger: GCTAAAGTGATTTAAGAGCACCAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR GCA 90 bp | GTGGAGTGGAACTCGGTGCCCTCCCTGAGGGCCTCCGAGAACTTGTCGTTCTCTGACGTTGACTTGCTCTaGTCCCACGGGGTTCTGATT | + |
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Preference number: 4 (lower is better) Translates to: VEWNSVPSLRASENLSFSDVDLL*SHGVLI Trigger: AATCAGAACCCCGTGGGAGCAGAGCAAGTCAACGTC...AGAGAACGACAAGTTCTCGGAGGCCCTCAGGGAGGGCACCGAGTTCCACTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| 3UTR CAA 72 bp | TGGAACTCGGTGCCCTCCCTGAGGGCCTCCGAGAACTaGTCGTTCTCTTCCTGCATCTTGAGCATCTGCGCT | + |
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Preference number: 4 (lower is better) Translates to: WNSVPSLRASEN*SFSSCILSICA Trigger: AGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCGGAGGCCCTCAGGGAGGGCACCGAGTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | TCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGGCTCCCACGGGGTTCTaGTTTTGCTCAGTGACGGCA | + |
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Preference number: 4 (lower is better) Translates to: SCILSICALSPLNMRSDQAPTGF*FCSVTA Trigger: TGCCGTCACTGAGCAAAATCAGAACCCCGTGGGAGC...CTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | GGGAGGCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCGGTGCCCTTACTTTCCTCGACGTTaGCTTGCTCTGCTCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: GRRSPSSCGTRWSGTRCPYFPRR*LALLPR Trigger: CCGTGGGAGCAGAGCAAGTCAACGTCGAGGAAAGTA...AGGGCACCGAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGCCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR GCA 90 bp | CGAGAACTTGTCGTTCTCTTCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTCTCTCCTCCTCCTCCTaGATCAGCCGCAGTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: RELVVLFLHLEHLRSVTTLSSSS*ISRSRS Trigger: CGAGCGACTGCGGCTGATGCAGGAGGAGGAGGAGAG...AGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | TGCCACGGGGGAGGCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCCACCTTGTAGGCTTGTaGGGCTTCTGGCAATTCCAC | + |
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Preference number: 4 (lower is better) Translates to: CHGGGEVLHHVVQGGVELHLVGL*GFWQFH Trigger: GTGGAATTGCCAGAAGCCTCACAAGCCTACAAGGTG...GAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR GCA 90 bp | GCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCGGTGCCCTCCCTGGAAGGACTTTGTTCATaGCACAGGGACTCATCTCCC | + |
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Preference number: 4 (lower is better) Translates to: AKSFIMWYKVEWNSVPSLEGLCS*HRDSSP Trigger: GGGAGATGAGTCCCTGTGGCATGAACAAAGTCCTTC...CAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR CCA 90 bp | ATCATGTGGTACAAGGTGGAGTGGAACTCGGTGCCCTCCCTGAGGGCCTCCGAGCGTGGCCAGGATCCTTaGGATTTCAAATCCAATTTG | + |
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Preference number: 4 (lower is better) Translates to: IMWYKVEWNSVPSLRASERGQDP*DFKSNL Trigger: CAAATTGGATTTGAAATCCCAAGGATCCTGGCCACG...CTCGGAGGCCCTCAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR CCA 90 bp | TGCCACGGGGGAGGCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCTCAAGTTGGGTGGTTTaGGAATCCTCCCCTTCAGAG | + |
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Preference number: 4 (lower is better) Translates to: CHGGGEVLHHVVQGGVELSSWVV*ESSPSE Trigger: CTCTGAAGGGGAGGATTCCCAAACCACCCAACTTGA...GAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR GCA 90 bp | CAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGTGCTCTCTCTCCTCCTCCTCCTaGATCAGCCGCAGTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QIKTIQIFVQCGWNAWCSLSSSS*ISRSRS Trigger: CGAGCGACTGCGGCTGATGCAGGAGGAGGAGGAGAG...AGAGCACCAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR CCA 90 bp | CTGACCCTCTCCATTGCCACGGGGGAGGCGAAGTCCTTCATCATGTGGTACAAGCACACTCCGGTGCCTTaGATTCTTTTTGAGGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LTLSIATGEAKSFIMWYKHTPVP*ILFEVC Trigger: GCAAACCTCAAAAAGAATCCAAGGCACCGGAGTGTG...CTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCAATGGAGAGGGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | TCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGCCTCTTGAACCAAGTTaGGCTCTCTTTCCTGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: SCILSICALSPLNMRSDQPLEPS*ALFPVQ Trigger: CTGAACAGGAAAGAGAGCTCAACTTGGTTCAAGAGG...CTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR CCA 90 bp | TCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGACTTGTTCAAAGGCCTaGTTCTTCTCCTCTTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: SCILSICALSPLNMRSDQTCSKA*FFSSSH Trigger: GTGGGAAGAGGAGAAGAACCAGGCCTTTGAACAAGT...CTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | GCGACCAGGTATGGTGCTCTGTTTCTTCTGACAGTTGTTCCCTCACCCAGCTTGGCCTTGGATTCTTTTTaGGGTTTGCCCACACGTACA | + |
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Preference number: 4 (lower is better) Translates to: ATRYGALFLLTVVPSPSLALDSF*GLPTRT Trigger: TGTACGTGTGGGCAAACCTCAAAAAGAATCCAAGGC...CAAGCTGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | TGCTCTGTTTCTTCTGACAGTTGTTCCCTCACCCAGCTTGCAGATAAGTCTCTCGCCCCTCAGTTTCACTaGAGCCAGCATGCAGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: CSVSSDSCSLTQLADKSLAPQFH*SQHAEV Trigger: AACCTCTGCATGCTGGCTTCAGTGAAACTGAGGGGC...GAGAGACTTATCTGCAAGCTGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR GCA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCCTGACCCTCTCCATTaGCACGGGGGAGGCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: EMYPNKDHSNLCAVWLERPDPLH*HGGGEV Trigger: GACTTCGCCTCCCCCGTGGCAATGGAGAGGGTCAGG...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR GCA 90 bp | ATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGCCTGACCCTCTCCATTaGCACGGGGGAGGCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: MYPNKDHSNLCAVWLERLPDPLH*HGGGEV Trigger: GACTTCGCCTCCCCCGTGGCAATGGAGAGGGTCAGG...CAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR CCA 90 bp | CGAGAACTTGTCGTTCTCTTCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGCAGTCGCTCGGCTTTaGTCATCTTTTTCTTACTGG | + |
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Preference number: 4 (lower is better) Translates to: RELVVLFLHLEHLRSVTTAVARL*SSFSYW Trigger: CCAGTAAGAAAAAGATGACCAAAGCCGAGCGACTGC...AGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCGCTCCCACGGGGTTCTaGTTTTGCTCAGTGACGGCA | + |
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Preference number: 4 (lower is better) Translates to: EMYPNKDHSNLCAVWLERAPTGF*FCSVTA Trigger: TGCCGTCACTGAGCAAAATCAGAACCCCGTGGGAGC...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR TCA 90 bp | TCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGTATTTGTTCTCCTCTTaGACCAAGTTGAGCTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SCILSICALSPLNMRSDQYLFSS*TKLSSL Trigger: AAGAGAGCTCAACTTGGTTCAAGAGGAGAACAAATA...CTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | GTTCTCTTCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGTGCAGAGGTTTTCCTTaGTGTATATCTGGAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VLFLHLEHLRSVTTEHEECRGFP*CISGAP Trigger: TGGAGCTCCAGATATACATCAAGGAAAACCTCTGCA...CTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR GCA 90 bp | AGCTTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCCTCTCCTCCTCCTCCTaGATCAGCCGCAGTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: SFLSERHQTLLRCIQIKTLSSSS*ISRSRS Trigger: CGAGCGACTGCGGCTGATGCAGGAGGAGGAGGAGAG...GGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR CCA 90 bp | TCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGGCTTTTCTTCAGTCATaGCCTTTTCTGTACTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SCILSICALSPLNMRSDQAFLQS*PFLYFP Trigger: AGGAAAGTACAGAAAAGGCCATGACTGAAGAAAAGC...CTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR TCA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCTACTTTCCTCGACGTTaGCTTGCTCTGCTCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: EMYPNKDHSNLCAVWLERYFPRR*LALLPR Trigger: CCGTGGGAGCAGAGCAAGTCAACGTCGAGGAAAGTA...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR GCA 90 bp | GTTCTCTTCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGAACATGAGGAGGGATATATAAACCTCTaGAGTCCTTCCTGGAGTATC | + |
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Preference number: 4 (lower is better) Translates to: VLFLHLEHLRSVTTEHEEGYINL*SPSWSI Trigger: GATACTCCAGGAAGGACTGCAGAGGTTTATATATCC...CTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR GCA 90 bp | TGCTCTGTTTCTTCTGACAGTTGTTCCCTCACCCAGCTTGCAGATAAGTCTCTCCAACCCTTGTGGAATTaGAGACCATGTTCCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: CSVSSDSCSLTQLADKSLQPLWN*RPCSTC Trigger: GCAAGTGGAACATGGTCTGCAATTCCACAAGGGTTG...GAGAGACTTATCTGCAAGCTGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
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| CDS-3UTR CCA 90 bp | CAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGTGCTCTAGGAGCGACCAGGTATaGTGCTCTGTTTCTTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: QIKTIQIFVQCGWNAWCSRSDQV*CSVSSD Trigger: GTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCT...AGAGCACCAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR TCA 90 bp | CAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGTGCTCTCCTCTTGAACCAAGTTaGGCTCTCTTTCCTGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: QIKTIQIFVQCGWNAWCSPLEPS*ALFPVQ Trigger: CTGAACAGGAAAGAGAGCTCAACTTGGTTCAAGAGG...AGAGCACCAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
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| CDS-3UTR CCA 90 bp | CAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGTGCTCTGCAGTCGCTCGGCTTTaGTCATCTTTTTCTTACTGG | + |
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Preference number: 4 (lower is better) Translates to: QIKTIQIFVQCGWNAWCSAVARL*SSFSYW Trigger: CCAGTAAGAAAAAGATGACCAAAGCCGAGCGACTGC...AGAGCACCAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
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| CDS-3UTR CCA 90 bp | ATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGTCATGTGGTACAAGGTaGAGTGGAACTCGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MYPNKDHSNLCAVWLERLSCGTR*SGTRCP Trigger: AGGGCACCGAGTTCCACTCCACCTTGTACCACATGA...CAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | CAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGTGCTCTTGCAGAGGTTTTCCTTaGTGTATATCTGGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIKTIQIFVQCGWNAWCSCRGFP*CISGAP Trigger: TGGAGCTCCAGATATACATCAAGGAAAACCTCTGCA...AGAGCACCAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCGCCCCTCAGTTTCACTaGAGCCAGCATGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSERHQTLLRCIQIKTAPQFH*SQHAEV Trigger: AACCTCTGCATGCTGGCTTCAGTGAAACTGAGGGGC...GGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | ATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGAAGGACTTTGTTCATaGCACAGGGACTCATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MYPNKDHSNLCAVWLERLEGLCS*HRDSSP Trigger: GGGAGATGAGTCCCTGTGGCATGAACAAAGTCCTTC...CAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCTCAAGTTGGGTGGTTTaGGAATCCTCCCCTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: EMYPNKDHSNLCAVWLERSSWVV*ESSPSE Trigger: CTCTGAAGGGGAGGATTCCCAAACCACCCAACTTGA...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | ATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGCCTTGGATTCTTTTTaGGGTTTGCCCACACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: MYPNKDHSNLCAVWLERLALDSF*GLPTRT Trigger: TGTACGTGTGGGCAAACCTCAAAAAGAATCCAAGGC...CAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCCTCTTGAACCAAGTTaGGCTCTCTTTCCTGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EMYPNKDHSNLCAVWLERPLEPS*ALFPVQ Trigger: CTGAACAGGAAAGAGAGCTCAACTTGGTTCAAGAGG...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | CAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGTGCTCTACGACAGCACCAGTTTaGTTTTCTCCATCACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QIKTIQIFVQCGWNAWCSTTAPV*FSPSLV Trigger: AACAAGTGATGGAGAAAAGCAAACTGGTGCTGTCGT...AGAGCACCAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | ATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGACTTGTTCAAAGGCCTaGTTCTTCTCCTCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: MYPNKDHSNLCAVWLERLTCSKA*FFSSSH Trigger: GTGGGAAGAGGAGAAGAACCAGGCCTTTGAACAAGT...CAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCACACTCCGGTGCCTTaGATTCTTTTTGAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EMYPNKDHSNLCAVWLERHTPVP*ILFEVC Trigger: GCAAACCTCAAAAAGAATCCAAGGCACCGGAGTGTG...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTACTTTCCTCGACGTTaGCTTGCTCTGCTCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGYFPRR*LALLPR Trigger: CCGTGGGAGCAGAGCAAGTCAACGTCGAGGAAAGTA...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | CAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGTGCTCTTATTTGTTCTCCTCTTaGACCAAGTTGAGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QIKTIQIFVQCGWNAWCSYLFSS*TKLSSL Trigger: AAGAGAGCTCAACTTGGTTCAAGAGGAGAACAAATA...AGAGCACCAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTGCCCCTCAGTTTCACTaGAGCCAGCATGCAGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLSERHQTLLRCIQIKTIAPQFH*SQHAEV Trigger: AACCTCTGCATGCTGGCTTCAGTGAAACTGAGGGGC...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | AGCTTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCTGCATCTTGAGCATCTaGGCTCTGTCACCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSERHQTLLRCIQIKTCILSI*ALSPLN Trigger: GTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCA...GGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCGTGGCCAGGATCCTTaGGATTTCAAATCCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EMYPNKDHSNLCAVWLERRGQDP*DFKSNL Trigger: CAAATTGGATTTGAAATCCCAAGGATCCTGGCCACG...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCGCCTTGGATTCTTTTTaGGGTTTGCCCACACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SFLSERHQTLLRCIQIKTALDSF*GLPTRT Trigger: TGTACGTGTGGGCAAACCTCAAAAAGAATCCAAGGC...GGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCCACCTTGTAGGCTTGTaGGGCTTCTGGCAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGHLVGL*GFWQFH Trigger: GTGGAATTGCCAGAAGCCTCACAAGCCTACAAGGTG...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCGTGCTCTGTTTCTTCTaGCAGTTGTTCCCTCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGVLCFF*QLFPHP Trigger: CGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCAC...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS-3UTR GCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCGACGTTGACTTGCTCTaGTCCCACGGGGTTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGDVDLL*SHGVLI Trigger: AATCAGAACCCCGTGGGAGCAGAGCAAGTCAACGTC...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTGACGTTGACTTGCTCTaGTCCCACGGGGTTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: FLSERHQTLLRCIQIKTIDVDLL*SHGVLI Trigger: AATCAGAACCCCGTGGGAGCAGAGCAAGTCAACGTC...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCACTTGTTCAAAGGCCTaGTTCTTCTCCTCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SFLSERHQTLLRCIQIKTTCSKA*FFSSSH Trigger: GTGGGAAGAGGAGAAGAACCAGGCCTTTGAACAAGT...GGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTTCATGTGGTACAAGGTaGAGTGGAACTCGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSERHQTLLRCIQIKTISCGTR*SGTRCP Trigger: AGGGCACCGAGTTCCACTCCACCTTGTACCACATGA...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | TTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGGTGCTCTGTTTCTTCTaGCAGTTGTTCCCTCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLRCIQIKTIQIFVQCGWVLCFF*QLFPHL Trigger: AAGGTGAGGGAACAACTGTCAGAAGAAACAGAGCAC...CCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTTGCATCTTGAGCATCTaGGCTCTGTCACCACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLSERHQTLLRCIQIKTICILSI*ALSPLN Trigger: GTTCAGTGGTGACAGAGCGCAGATGCTCAAGATGCA...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTTCAAGTTGGGTGGTTTaGGAATCCTCCCCTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLSERHQTLLRCIQIKTISSWVV*ESSPSE Trigger: CTCTGAAGGGGAGGATTCCCAAACCACCCAACTTGA...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCAGGAGCGACCAGGTATaGTGCTCTGTTTCTTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGRSDQV*CSVSSD Trigger: GTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCT...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | ATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAATGCAGAGGTTTTCCTTaGTGTATATCTGGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IEMYPNKDHSNLCAVWLECRGFP*CISGAP Trigger: TGGAGCTCCAGATATACATCAAGGAAAACCTCTGCA...TTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCCAACCCTTGTGGAATTaGAGACCATGTTCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGQPLWN*RPCSTC Trigger: GCAAGTGGAACATGGTCTGCAATTCCACAAGGGTTG...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTCACACTCCGGTGCCTTaGATTCTTTTTGAGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLSERHQTLLRCIQIKTIHTPVP*ILFEVC Trigger: GCAAACCTCAAAAAGAATCCAAGGCACCGGAGTGTG...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | TTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGCGTGGCCAGGATCCTTaGGATTTCAAATCCAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLRCIQIKTIQIFVQCGWRGQDP*DFKSNL Trigger: CAAATTGGATTTGAAATCCCAAGGATCCTGGCCACG...CCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | AGCTTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCGCTTTTCTTCAGTCATaGCCTTTTCTGTACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SFLSERHQTLLRCIQIKTAFLQS*PFLYFP Trigger: AGGAAAGTACAGAAAAGGCCATGACTGAAGAAAAGC...GGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCAAGTCCTTCATCATGTaGTACAAGGTGGAGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGKSFIM*YKVEWN Trigger: GTTCCACTCCACCTTGTACCACATGATGAAGGACTT...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR TCA 90 bp | ATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAATATTTGTTCTCCTCTTaGACCAAGTTGAGCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IEMYPNKDHSNLCAVWLEYLFSS*TKLSSL Trigger: AAGAGAGCTCAACTTGGTTCAAGAGGAGAACAAATA...TTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCACGACAGCACCAGTTTaGTTTTCTCCATCACTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGTTAPV*FSPSLV Trigger: AACAAGTGATGGAGAAAAGCAAACTGGTGCTGTCGT...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCGGATATATAAACCTCTaGAGTCCTTCCTGGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGGYINL*SPSWSI Trigger: GATACTCCAGGAAGGACTGCAGAGGTTTATATATCC...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTGGATATATAAACCTCTaGAGTCCTTCCTGGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: FLSERHQTLLRCIQIKTIGYINL*SPSWSI Trigger: GATACTCCAGGAAGGACTGCAGAGGTTTATATATCC...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CCA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCGCTTTTCTTCAGTCATaGCCTTTTCTGTACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGAFLQS*PFLYFP Trigger: AGGAAAGTACAGAAAAGGCCATGACTGAAGAAAAGC...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS GCA 90 bp | GTCCTTCCTGGAGTATCTCCACTAGCACCCAGCCCTTCACAGGCTTaGACTGAGGGGGCAGCTCCAGAACATCCAGGTGGTACACGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VLPGVSPLAPSPSQA*TEGAAPEHPGGTRR Trigger: GCGGCGTGTACCACCTGGATGTTCTGGAGCTGCCCCCTCAGTGCAAGCCTGTGAAGGGCTGGGTGCTAGTGGAGATACTCCAGGAAGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | ATCATGTGGTACAAGGTGGAGTGGAACTCGGTGCCCTCCCTGAGGGCCTCCGAGGCTCAGCAGGGCCATTaGCCGATAGGCCTTCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: IMWYKVEWNSVPSLRASEAQQGH*PIGLQL Trigger: GAGTTGAAGGCCTATCGGCAAATGGCCCTGCTGAGC...CTCGGAGGCCCTCAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS CCA 90 bp | TCCCACCTGACGACCCTAGGGCGCTCAAAGAAGATGACGCTCTTGTaGATCTCCAGTGTGACCTCTATGGGTGGGAAGGTGACGTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SHLTTLGRSKKMTLL*ISSVTSMGGKVTSG Trigger: TCCAGACGTCACCTTCCCACCCATAGAGGTCACACTGGAGATCCACAAGAGCGTCATCTTCTTTGAGCGCCCTAGGGTCGTCAGGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | GCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCGGTGCCCTCCCTGAGCCGAAGAGCAACATaGCTCGTGGCCAGGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AKSFIMWYKVEWNSVPSLSRRAT*LVARIL Trigger: AAGGATCCTGGCCACGAGCAATGTTGCTCTTCGGCT...CAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | ATCATGTGGTACAAGGTGGAGTGGAACTCGGTGCCCTCCCTGAGGGCCTCCGAGTCGTGGCCAGGATCCTaGGGATTTCAAATCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: IMWYKVEWNSVPSLRASESWPGS*GFQIQF Trigger: AAATTGGATTTGAAATCCCAAGGATCCTGGCCACGA...CTCGGAGGCCCTCAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | TGCCACGGGGGAGGCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCGCCGAATCACAACCCTaGTGGAATTGCAGACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: CHGGGEVLHHVVQGGVELAESQP*WNCRPC Trigger: ACATGGTCTGCAATTCCACAAGGGTTGTGATTCGGC...GAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS CCA 90 bp | AAAGAAGATGACGCTCTTGTGGATCTCCAGTGTGACCTCTATGGGTaGGAAGGTGACGTCTGGATCAGGTTCCTCTGTGGTGTCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEDDALVDLQCDLYG*EGDVWIRFLCGVWR Trigger: CCTCCAGACACCACAGAGGAACCTGATCCAGACGTCACCTTCCCACCCATAGAGGTCACACTGGAGATCCACAAGAGCGTCATCTTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | GCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCGGTGCCCTCCCTGACAACCCTTGTGGAATaGCAGACCATGTTCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: AKSFIMWYKVEWNSVPSLTTLVE*QTMFHL Trigger: CAAGTGGAACATGGTCTGCAATTCCACAAGGGTTGT...CAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS GCA 90 bp | ATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGGTATGGTaGTCTGTTTCTTCTGACAGTTGTTCCCTCACCCGAATCACAACC | + |
|
Preference number: 5 (lower is better) Translates to: ICALSPLNMRSDQVW*SVSSDSCSLTRITT Trigger: GGTTGTGATTCGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS CCA 90 bp | AGCATCTGCGCTCTGTCACCACTGAACATGAGGAGCGACCAGGTATaGTGCTCTGTTTCTTCTGACAGTTGTTCCCTCACCCGAATCACA | + |
|
Preference number: 5 (lower is better) Translates to: SICALSPLNMRSDQV*CSVSSDSCSLTRIT Trigger: TGTGATTCGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAGAGCGCAGATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS-3UTR CAA 90 bp | GCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCGGTGCCCTCCCTGGCTTTTCTCCATCACTaGTTCAAAGGCCTGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AKSFIMWYKVEWNSVPSLAFLHH*FKGLVL Trigger: AAGAACCAGGCCTTTGAACAAGTGATGGAGAAAAGC...CAGGGAGGGCACCGAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | CGAGAACTTGTCGTTCTCTTCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTCTTTCCTGTTCAGCCTaGGGCTGCTCATCTTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RELVVLFLHLEHLRSVTTLSCSA*GCSSSL Trigger: CAACGAAGATGAGCAGCCCAAGGCTGAACAGGAAAG...AGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS CCA 90 bp | CTTGTGGATCTCCAGTGTGACCTCTATGGGTGGGAAGGTGACGTCTaGATCAGGTTCCTCTGTGGTGTCTGGAGGATATATAAACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVDLQCDLYGWEGDV*IRFLCGVWRIYKPL Trigger: CAGAGGTTTATATATCCTCCAGACACCACAGAGGAACCTGATCCAGACGTCACCTTCCCACCCATAGAGGTCACACTGGAGATCCACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | TGCTCTGTTTCTTCTGACAGTTGTTCCCTCACCCAGCTTGCAGATAAGTCTCTCCACGGGGTTCTGATTTaGCTCAGTGACGGCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSVSSDSCSLTQLADKSLHGVLI*LSDGNG Trigger: CCCATTGCCGTCACTGAGCAAAATCAGAACCCCGTG...GAGAGACTTATCTGCAAGCTGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS CCA 90 bp | ACTGCTTCACTCAGCAGCTTCATCTCCAGTTCAAGTTGGGTGGTTTaGGAATCCTCCCCTTCAGAGTCGGAAGTCCTTTGTAAGACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TASLSSFISSSSWVV*ESSPSESEVLCKTV Trigger: CACTGTCTTACAAAGGACTTCCGACTCTGAAGGGGAGGATTCCCAAACCACCCAACTTGAACTGGAGATGAAGCTGCTGAGTGAAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CCA 90 bp | CTGTTTCTTCTGACAGTTGTTCCCTCACCCGAATCACAACCCTTGTaGAATTGCAGACCATGTTCCACTTGCTCCAGCCAAACGAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LFLLTVVPSPESQPL*NCRPCSTCSSQTRR Trigger: CCTTCTCGTTTGGCTGGAGCAAGTGGAACATGGTCTGCAATTCCACAAGGGTTGTGATTCGGGTGAGGGAACAACTGTCAGAAGAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS-3UTR CAA 90 bp | CGAGAACTTGTCGTTCTCTTCCTGCATCTTGAGCATCTGCGCTCTGTCACCACTGGCTGCTCATCTTCGTaGGCAGCTTTTTCTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RELVVLFLHLEHLRSVTTGCSSS*AAFSSV Trigger: TACTGAAGAAAAAGCTGCCAACGAAGATGAGCAGCC...AGTGGTGACAGAGCGCAGATGCTCAAGATGCAGGAAGAGAACGACAAGTTCTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | TGCCACGGGGGAGGCGAAGTCCTTCATCATGTGGTACAAGGTGGAGTGGAACTCATATTTGTTCTCCTCTaGAACCAAGTTGAGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CHGGGEVLHHVVQGGVELIFVLL*NQVELS Trigger: AGAGAGCTCAACTTGGTTCAAGAGGAGAACAAATAT...GAGTTCCACTCCACCTTGTACCACATGATGAAGGACTTCGCCTCCCCCGTGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCGCTCAGCAGGGCCATTaGCCGATAGGCCTTCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: EMYPNKDHSNLCAVWLERAQQGH*PIGLQL Trigger: GAGTTGAAGGCCTATCGGCAAATGGCCCTGCTGAGC...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS CCA 90 bp | TGTGGTCATAGCGTGTGTGTAGAAGCCGAAGAGCAACATTGCTCGTaGCCAGGATCCTTGGGATTTCAAATCCAATTTGTGTCTCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CGHSVCVEAEEQHCS*PGSLGFQIQFVSLR Trigger: TCTCAGAGACACAAATTGGATTTGAAATCCCAAGGATCCTGGCCACGAGCAATGTTGCTCTTCGGCTTCTACACACACGCTATGACCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | ATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGAGCCGAAGAGCAACATaGCTCGTGGCCAGGATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: MYPNKDHSNLCAVWLERLSRRAT*LVARIL Trigger: AAGGATCCTGGCCACGAGCAATGTTGCTCTTCGGCT...CAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | ATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGCACGGGGTTCTGATTTaGCTCAGTGACGGCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: MYPNKDHSNLCAVWLERLHGVLI*LSDGNG Trigger: CCCATTGCCGTCACTGAGCAAAATCAGAACCCCGTG...CAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCACGGGGTTCTGATTTaGCTCAGTGACGGCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: EMYPNKDHSNLCAVWLERHGVLI*LSDGNG Trigger: CCCATTGCCGTCACTGAGCAAAATCAGAACCCCGTG...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCCCGAATCACAACCCTaGTGGAATTGCAGACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: EMYPNKDHSNLCAVWLERPESQP*WNCRPC Trigger: ACATGGTCTGCAATTCCACAAGGGTTGTGATTCGGG...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS-3UTR CAA 90 bp | ATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCCTGGGCTGCTCATCTTCGTaGGCAGCTTTTTCTTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: MYPNKDHSNLCAVWLERLGCSSS*AAFSSV Trigger: TACTGAAGAAAAAGCTGCCAACGAAGATGAGCAGCC...CAGGCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS TCA 90 bp | CTTTGTAAGACAGTGTTCTCTATAGCTTCATATTTGTTCTCCTCTTaGACCAAGTTGAGCTCTCTTTCCTGTTCAGCCTTGGGCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCKTVFSIASYLFSS*TKLSSLSCSALGCS Trigger: TGAGCAGCCCAAGGCTGAACAGGAAAGAGAGCTCAACTTGGTTCAAGAGGAGAACAAATATGAAGCTATAGAGAACACTGTCTTACAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | GAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACGCTCGTGGCCAGGATCCTaGGGATTTCAAATCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: EMYPNKDHSNLCAVWLERSWPGS*GFQIQF Trigger: AAATTGGATTTGAAATCCCAAGGATCCTGGCCACGA...GCGTTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | TTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGCTTTCCTGTTCAGCCTaGGGCTGCTCATCTTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LLRCIQIKTIQIFVQCGWLSCSA*GCSSSL Trigger: CAACGAAGATGAGCAGCCCAAGGCTGAACAGGAAAG...CCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | ATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAACTTTCCTGTTCAGCCTaGGGCTGCTCATCTTCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: IEMYPNKDHSNLCAVWLELSCSA*GCSSSL Trigger: CAACGAAGATGAGCAGCCCAAGGCTGAACAGGAAAG...TTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS CCA 90 bp | AGTTTCACTGAAGCCAGCATGCAGAGGTTTTCCTTGATGTATATCTaGAGCTCCATGAAAACCGTCTTCACTATTAGAAGGACTTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFTEASMQRFSLMYI*SSMKTVFTIRRTLF Trigger: GAACAAAGTCCTTCTAATAGTGAAGACGGTTTTCATGGAGCTCCAGATATACATCAAGGAAAACCTCTGCATGCTGGCTTCAGTGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS-3UTR CAA 90 bp | AGCTTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCACAACCCTTGTGGAATaGCAGACCATGTTCCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: SFLSERHQTLLRCIQIKTTTLVE*QTMFHL Trigger: CAAGTGGAACATGGTCTGCAATTCCACAAGGGTTGT...GGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS-3UTR CAA 90 bp | ATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTGGAAAACGACAGCACCAGTTaGCTTTTCTCCATCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IEMYPNKDHSNLCAVWLENDSTS*LFSITC Trigger: ACAAGTGATGGAGAAAAGCAAACTGGTGCTGTCGTT...TTCCAGCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTGCTTTTCTCCATCACTaGTTCAAAGGCCTGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLSERHQTLLRCIQIKTIAFLHH*FKGLVL Trigger: AAGAACCAGGCCTTTGAACAAGTGATGGAGAAAAGC...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCGCTTTTCTCCATCACTaGTTCAAAGGCCTGGTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGAFLHH*FKGLVL Trigger: AAGAACCAGGCCTTTGAACAAGTGATGGAGAAAAGC...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAGTGAGAGGCATCAGACTTTATTGAGATGTATCCAAATAAAGACCATTAACGACAGCACCAGTTaGCTTTTCTCCATCACTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLSERHQTLLRCIQIKTINDSTS*LFSITC Trigger: ACAAGTGATGGAGAAAAGCAAACTGGTGCTGTCGTT...AATGGTCTTTATTTGGATACATCTCAATAAAGTCTGATGCCTCTCACTCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCTCGTGGCCAGGATCCTaGGGATTTCAAATCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGSWPGS*GFQIQF Trigger: AAATTGGATTTGAAATCCCAAGGATCCTGGCCACGA...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS-3UTR CAA 90 bp | ACTTTATTGAGATGTATCCAAATAAAGACCATTCAAATCTTTGTGCAGTGTGGCATATTTGTTCTCCTCTaGAACCAAGTTGAGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLRCIQIKTIQIFVQCGIFVLL*NQVELS Trigger: AGAGAGCTCAACTTGGTTCAAGAGGAGAACAAATAT...GCCACACTGCACAAAGATTTGAATGGTCTTTATTTGGATACATCTCAATAAAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 |
||
| CDS CCA 72 bp | TCCTCTTCCCACAGGCTAATGAACGTGTTCATTTCCTaGGCAACCCAAGGGTCGGGGCTCCCATCACACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSHRLMNVFIS*ATQGSGLPSHS Trigger: GGAGTGTGATGGGAGCCCCGACCCTTGGGTTGCCCAGGAAATGAACACGTTCATTAGCCTGTGGGAAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CAA 90 bp | TTGTCCCACCTGACGACCCTAGGGCGCTCAAAGAAGATGACGCTCTaGTGGATCTCCAGTGTGACCTCTATGGGTGGGAAGGTGACGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSHLTTLGRSKKMTL*WISSVTSMGGKVTS Trigger: AGACGTCACCTTCCCACCCATAGAGGTCACACTGGAGATCCACAAGAGCGTCATCTTCTTTGAGCGCCCTAGGGTCGTCAGGTGGGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CAA 72 bp | CTGACGACCCTAGGGCGCTCAAAGAAGATGACGCTCTaGTGGATCTCCAGTGTGACCTCTATGGGTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LTTLGRSKKMTL*WISSVTSMGGK Trigger: CTTCCCACCCATAGAGGTCACACTGGAGATCCACAAGAGCGTCATCTTCTTTGAGCGCCCTAGGGTCGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CAA 72 bp | CAGCCTCCCCAGTGCCGAATCACAACCCTTGTGGAATaGCAGACCATGTTCCACTTGCTCCAGCCAAACGAG | + |
|
Preference number: 6 (lower is better) Translates to: QPPQCRITTLVE*QTMFHLLQPNE Trigger: CTCGTTTGGCTGGAGCAAGTGGAACATGGTCTGCAATTCCACAAGGGTTGTGATTCGGCACTGGGGAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204105.2 |
||
| CDS TCA 72 bp | AGGCTGAGCAGCTCTTGTAGGCGCAGAATTGACCCTTaGTGCTGCAGGACAGTCCTGTGGTCCAGCTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: RLSSSCRRRIDP*CCRTVLWSSSY Trigger: ATATGAGCTGGACCACAGGACTGTCCTGCAGCATCAAGGGTCAATTCTGCGCCTACAAGAGCTGCTCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CAA 72 bp | GACGTTGACTTGCTCTGCTCCCACGGGGTTCTGATTTaGCTCAGTGACGGCAATGGGGAACAAGGGTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: DVDLLCSHGVLI*LSDGNGEQGCD Trigger: ATCACACCCTTGTTCCCCATTGCCGTCACTGAGCAAAATCAGAACCCCGTGGGAGCAGAGCAAGTCAACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS GCA 72 bp | CTGTCACCACTGAACATGAGGAGCGACCAGGTATGGTaGTCTGTTTCTTCTGACAGTTGTTCCCTCACCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LSPLNMRSDQVW*SVSSDSCSLTR Trigger: TCGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS CCA 72 bp | CTCCAGTGTGACCTCTATGGGTGGGAAGGTGACGTCTaGATCAGGTTCCTCTGTGGTGTCTGGAGGATATAT | + |
|
Preference number: 6 (lower is better) Translates to: LQCDLYGWEGDV*IRFLCGVWRIY Trigger: ATATATCCTCCAGACACCACAGAGGAACCTGATCCAGACGTCACCTTCCCACCCATAGAGGTCACACTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CAA 72 bp | GACTGCTTCACTCAGCAGCTTCATCTCCAGTTCAAGTaGGGTGGTTTGGGAATCCTCCCCTTCAGAGTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: DCFTQQLHLQFK*GGLGILPFRVG Trigger: TCCGACTCTGAAGGGGAGGATTCCCAAACCACCCAACTTGAACTGGAGATGAAGCTGCTGAGTGAAGCAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CAA 90 bp | TCTTCTGACAGTTGTTCCCTCACCCGAATCACAACCCTTGTGGAATaGCAGACCATGTTCCACTTGCTCCAGCCAAACGAGAAGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSDSCSLTRITTLVE*QTMFHLLQPNEKAE Trigger: CTCTGCCTTCTCGTTTGGCTGGAGCAAGTGGAACATGGTCTGCAATTCCACAAGGGTTGTGATTCGGGTGAGGGAACAACTGTCAGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS TCA 72 bp | CATGAGGAGCGACCAGGTATGGTGCTCTGTTTCTTCTaGCAGTTGTTCCCTCACCCGAATCACAACCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HEERPGMVLCFF*QLFPHPNHNPC Trigger: ACAAGGGTTGTGATTCGGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
||
| CDS GCA 72 bp | GGTTCCTCTGTGGTGTCTGGAGGATATATAAACCTCTaGAGTCCTTCCTGGAGTATCTCCACTAGCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GSSVVSGGYINL*SPSWSISTSTQ Trigger: CTGGGTGCTAGTGGAGATACTCCAGGAAGGACTGCAGAGGTTTATATATCCTCCAGACACCACAGAGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CCA 72 bp | CTCAGCAGCTTCATCTCCAGTTCAAGTTGGGTGGTTTaGGAATCCTCCCCTTCAGAGTCGGAAGTCCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSSFISSSSWVV*ESSPSESEVLC Trigger: ACAAAGGACTTCCGACTCTGAAGGGGAGGATTCCCAAACCACCCAACTTGAACTGGAGATGAAGCTGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
||
| CDS CCA 72 bp | GAAGGTGACGTCTGGATCAGGTTCCTCTGTGGTGTCTaGAGGATATATAAACCTCTGCAGTCCTTCCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: EGDVWIRFLCGV*RIYKPLQSFLE Trigger: CTCCAGGAAGGACTGCAGAGGTTTATATATCCTCCAGACACCACAGAGGAACCTGATCCAGACGTCACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CCA 72 bp | CTGACAGTTGTTCCCTCACCCGAATCACAACCCTTGTaGAATTGCAGACCATGTTCCACTTGCTCCAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LTVVPSPESQPL*NCRPCSTCSSQ Trigger: TTGGCTGGAGCAAGTGGAACATGGTCTGCAATTCCACAAGGGTTGTGATTCGGGTGAGGGAACAACTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
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| CDS CAA 72 bp | ACTCAGCAGCTTCATCTCCAGTTCAAGTTGGGTGGTTaGGGAATCCTCCCCTTCAGAGTCGGAAGTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: TQQLHLQFKLGG*GILPFRVGSPL Trigger: CAAAGGACTTCCGACTCTGAAGGGGAGGATTCCCAAACCACCCAACTTGAACTGGAGATGAAGCTGCTGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 72 bp | AGTTGTTCCCTCACCCGAATCACAACCCTTGTGGAATaGCAGACCATGTTCCACTTGCTCCAGCCAAACGAG | + |
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Preference number: 6 (lower is better) Translates to: SCSLTRITTLVE*QTMFHLLQPNE Trigger: CTCGTTTGGCTGGAGCAAGTGGAACATGGTCTGCAATTCCACAAGGGTTGTGATTCGGGTGAGGGAACAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060797.10 |
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| CDS GCA 72 bp | CTGTCACCACTGAACATGAGGAGCGACCAGGTATGGTaGTCTGTTTCTTCTGACAGTTGTTCCCTCACCTTA | + |
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Preference number: 6 (lower is better) Translates to: LSPLNMRSDQVW*SVSSDSCSLTL Trigger: TAAGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATGTTCAGTGGTGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111728.8 |
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| CDS CAA 72 bp | TCTGAGAACCTCACACTCCGGTGCCTTGGATTCTTTTaGAGGTTTGCCCACACGTACAGGGTGACATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SENLTLRCLGFF*RFAHTYRVTFS Trigger: TGAGAATGTCACCCTGTACGTGTGGGCAAACCTCAAAAAGAATCCAAGGCACCGGAGTGTGAGGTTCTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 90 bp | GTGTGTGTAGAAGCCGAAGAGCAACATTGCTCGTGGCCAGGATCCTaGGGATTTCAAATCCAATTTGTGTCTCTGAGAACCTCACACTCC | + |
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Preference number: 6 (lower is better) Translates to: VCVEAEEQHCSWPGS*GFQIQFVSLRTSHS Trigger: GGAGTGTGAGGTTCTCAGAGACACAAATTGGATTTGAAATCCCAAGGATCCTGGCCACGAGCAATGTTGCTCTTCGGCTTCTACACACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS TCA 72 bp | CATGAGGAGCGACCAGGTATGGTGCTCTGTTTCTTCTaGCAGTTGTTCCCTCACCTTATTGTTGATGACCAC | + |
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Preference number: 6 (lower is better) Translates to: HEERPGMVLCFF*QLFPHLIVDDH Trigger: GTGGTCATCAACAATAAGGTGAGGGAACAACTGTCAGAAGAAACAGAGCACCATACCTGGTCGCTCCTCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111728.8 |
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| CDS GCA 72 bp | CCATCCATTTTCCTTTTAGATGAAACTCGAGTCCCTTaGCCCTCAGTTTCACTGAAGCCAGCATGCAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PSIFLLDETRVP*PSVSLKPACRG Trigger: ACCTCTGCATGCTGGCTTCAGTGAAACTGAGGGGCAAGGGACTCGAGTTTCATCTAAAAGGAAAATGGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CCA 72 bp | AGCGTGTGTGTAGAAGCCGAAGAGCAACATTGCTCGTaGCCAGGATCCTTGGGATTTCAAATCCAATTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SVCVEAEEQHCS*PGSLGFQIQFV Trigger: CACAAATTGGATTTGAAATCCCAAGGATCCTGGCCACGAGCAATGTTGCTCTTCGGCTTCTACACACACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 72 bp | GAAGCCGAAGAGCAACATTGCTCGTGGCCAGGATCCTaGGGATTTCAAATCCAATTTGTGTCTCTGAGAACC | + |
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Preference number: 6 (lower is better) Translates to: EAEEQHCSWPGS*GFQIQFVSLRT Trigger: GGTTCTCAGAGACACAAATTGGATTTGAAATCCCAAGGATCCTGGCCACGAGCAATGTTGCTCTTCGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 72 bp | AGCTCCATGAAAACCGTCTTCACTATTAGAAGGACTTaGTTCATGCCACAGGGACTCATCTCCCAGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SSMKTVFTIRRT*FMPQGLISQDW Trigger: CCAGTCCTGGGAGATGAGTCCCTGTGGCATGAACAAAGTCCTTCTAATAGTGAAGACGGTTTTCATGGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 90 bp | ATTTGTGTCTCTGAGAACCTCACACTCCGGTGCCTTGGATTCTTTTaGAGGTTTGCCCACACGTACAGGGTGACATTCTCATCTTTGATG | + |
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Preference number: 6 (lower is better) Translates to: ICVSENLTLRCLGFF*RFAHTYRVTFSSLM Trigger: CATCAAAGATGAGAATGTCACCCTGTACGTGTGGGCAAACCTCAAAAAGAATCCAAGGCACCGGAGTGTGAGGTTCTCAGAGACACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 90 bp | AAGTTGAGCTCTCTTTCCTGTTCAGCCTTGGGCTGCTCATCTTCGTaGGCAGCTTTTTCTTCAGTAAAGAGCTTTTCTTCAGTCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: KLSSLSCSALGCSSS*AAFSSVKSFSSVMA Trigger: GGCCATGACTGAAGAAAAGCTCTTTACTGAAGAAAAAGCTGCCAACGAAGATGAGCAGCCCAAGGCTGAACAGGAAAGAGAGCTCAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CCA 72 bp | ACCAGTTTGCTTTTCTCCATCACTTGTTCAAAGGCCTaGTTCTTCTCCTCTTCCCACAGGCTAATGAACGTG | + |
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Preference number: 6 (lower is better) Translates to: TSLLFSITCSKA*FFSSSHRLMNV Trigger: CACGTTCATTAGCCTGTGGGAAGAGGAGAAGAACCAGGCCTTTGAACAAGTGATGGAGAAAAGCAAACTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 72 bp | AATCAACGACAGCACCAGTTTGCTTTTCTCCATCACTaGTTCAAAGGCCTGGTTCTTCTCCTCTTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: NQRQHQFAFLHH*FKGLVLLLFPQ Trigger: CTGTGGGAAGAGGAGAAGAACCAGGCCTTTGAACAAGTGATGGAGAAAAGCAAACTGGTGCTGTCGTTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 90 bp | CACCTTTTCAATCAACGACAGCACCAGTTTGCTTTTCTCCATCACTaGTTCAAAGGCCTGGTTCTTCTCCTCTTCCCACAGGCTAATGAA | + |
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Preference number: 6 (lower is better) Translates to: HLFNQRQHQFAFLHH*FKGLVLLLFPQANE Trigger: TTCATTAGCCTGTGGGAAGAGGAGAAGAACCAGGCCTTTGAACAAGTGATGGAGAAAAGCAAACTGGTGCTGTCGTTGATTGAAAAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS TCA 72 bp | CAGGATCCTTGGGATTTCAAATCCAATTTGTGTCTCTaGGAACCTCACACTCCGGTGCCTTGGATTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: QDPWDFKSNLCL*EPHTPVPWILF Trigger: AAAAAGAATCCAAGGCACCGGAGTGTGAGGTTCTCAGAGACACAAATTGGATTTGAAATCCCAAGGATCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CCA 72 bp | GAAGCCAGCATGCAGAGGTTTTCCTTGATGTATATCTaGAGCTCCATGAAAACCGTCTTCACTATTAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: EASMQRFSLMYI*SSMKTVFTIRR Trigger: CCTTCTAATAGTGAAGACGGTTTTCATGGAGCTCCAGATATACATCAAGGAAAACCTCTGCATGCTGGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 72 bp | TCTCTTTCCTGTTCAGCCTTGGGCTGCTCATCTTCGTaGGCAGCTTTTTCTTCAGTAAAGAGCTTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSCSALGCSSS*AAFSSVKSFSS Trigger: TGAAGAAAAGCTCTTTACTGAAGAAAAAGCTGCCAACGAAGATGAGCAGCCCAAGGCTGAACAGGAAAGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS TCA 72 bp | ACAGTGTTCTCTATAGCTTCATATTTGTTCTCCTCTTaGACCAAGTTGAGCTCTCTTTCCTGTTCAGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: TVFSIASYLFSS*TKLSSLSCSAL Trigger: CAAGGCTGAACAGGAAAGAGAGCTCAACTTGGTTCAAGAGGAGAACAAATATGAAGCTATAGAGAACACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 72 bp | ATTAACTTCACCTTTTCAATCAACGACAGCACCAGTTaGCTTTTCTCCATCACTTGTTCAAAGGCCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: INFTFSINDSTS*LFSITCSKAWF Trigger: GAACCAGGCCTTTGAACAAGTGATGGAGAAAAGCAAACTGGTGCTGTCGTTGATTGAAAAGGTGAAGTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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| CDS CAA 90 bp | TTCTTTTTGAGGTTTGCCCACACGTACAGGGTGACATTCTCATCTTaGATGATTTTCTCCATATTCCCAGTGTCCAGATCTGCTAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: FFLRFAHTYRVTFSS*MIFSIFPVSRSAKL Trigger: TAACTTAGCAGATCTGGACACTGGGAATATGGAGAAAATCATCAAAGATGAGAATGTCACCCTGTACGTGTGGGCAAACCTCAAAAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000060797.10 ENSMUST00000111728.8 ENSMUST00000204105.2 |
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