Pregenerated sensors for CARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056228Ensembl transcript IDs: ENSMUST00000049461.7, ENSMUST00000209676.2, ENSMUST00000210478.2, ENSMUST00000210599.2, ENSMUST00000211395.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCCAGGCCGTCCGTCTCCCCACGGCGAAGCCCAGAACACCTCCTaGGGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTGCTGTGCCGC | + |
|
Preference number: 1 (lower is better) Translates to: HPGRPSPHGEAQNTS*GLAAFHRAKSLLCR Trigger: GCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGTTCTGGGCTTCGCCGTGGGGAGACGGACGGCCTGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | CGGAGTGTGTCACATGCCTCCAGCAAGGGCTGCCTTTCCTGGAGCTaGCGTTTCCGAGCCTCCCCAGCAGCCCCGGGTGTGTCCAGTGCA | + |
|
Preference number: 1 (lower is better) Translates to: RSVSHASSKGCLSWS*RFRASPAAPGVSSA Trigger: TGCACTGGACACACCCGGGGCTGCTGGGGAGGCTCGGAAACGGCAGCTCCAGGAAAGGCAGCCCTTGCTGGAGGCATGTGACACACTCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | GTGACGAGGTCCTGTCGGAGTGTGTCACATGCCTCCAGCAAGGGCTaGCTTTCCTGGAGCTGCCGTTTCCGAGCCTCCCCAGCAGCCCCG | + |
|
Preference number: 1 (lower is better) Translates to: VTRSCRSVSHASSKG*LSWSCRFRASPAAP Trigger: CGGGGCTGCTGGGGAGGCTCGGAAACGGCAGCTCCAGGAAAGGCAGCCCTTGCTGGAGGCATGTGACACACTCCGACAGGACCTCGTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 90 bp | GCCGTCCGTCTCCCCACGGCGAAGCCCAGAACACCTCCTGAGGTTTaGCTGCCTTCCACAGGGCGAAGTCGCTGCTGTGCCGCTTGTCAG | + |
|
Preference number: 1 (lower is better) Translates to: AVRLPTAKPRTPPEV*LPSTGRSRCCAACQ Trigger: CTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGTTCTGGGCTTCGCCGTGGGGAGACGGACGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 90 bp | TCCTGTCGGAGTGTGTCACATGCCTCCAGCAAGGGCTGCCTTTCCTaGAGCTGCCGTTTCCGAGCCTCCCCAGCAGCCCCGGGTGTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: SCRSVSHASSKGCLS*SCRFRASPAAPGVS Trigger: GGACACACCCGGGGCTGCTGGGGAGGCTCGGAAACGGCAGCTCCAGGAAAGGCAGCCCTTGCTGGAGGCATGTGACACACTCCGACAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | TCCGTCTCCCCACGGCGAAGCCCAGAACACCTCCTGAGGTTTGGCTaGCTTCCACAGGGCGAAGTCGCTGCTGTGCCGCTTGTCAGAGTC | + |
|
Preference number: 1 (lower is better) Translates to: SVSPRRSPEHLLRFG*LPQGEVAAVPLVRV Trigger: GACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGTTCTGGGCTTCGCCGTGGGGAGACGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | AGGTGGCTTCCGAACACCTCACTGGCCATGGTAGAGCACTCGATGTaGCATCCAGGCCGTCCGTCTCCCCACGGCGAAGCCCAGAACACC | + |
|
Preference number: 1 (lower is better) Translates to: RWLPNTSLAMVEHSM*HPGRPSPHGEAQNT Trigger: GGTGTTCTGGGCTTCGCCGTGGGGAGACGGACGGCCTGGATGGCACATCGAGTGCTCTACCATGGCCAGTGAGGTGTTCGGAAGCCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | AGAACACCTCCTGAGGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGTCACCTGCTGGTGACAGGGGGTTGC | + |
|
Preference number: 1 (lower is better) Translates to: RTPPEVWLPSTGRSR*CAACQSHLLVTGGC Trigger: GCAACCCCCTGTCACCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 90 bp | GCAGCGCATGGGATGCAGCCACCTCATCCTCGGTCCCCAGGTTTCTaGTGTCTTGTCCTTGGATCCAGCAGTTCCCATGTGGAGGCTGCA | + |
|
Preference number: 1 (lower is better) Translates to: AAHGMQPPHPRSPGF*CLVLGSSSSHVEAA Trigger: TGCAGCCTCCACATGGGAACTGCTGGATCCAAGGACAAGACACCAGAAACCTGGGGACCGAGGATGAGGTGGCTGCATCCCATGCGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | CCTTGGGCCACTAGCTTCCTTGGAGACCGCCCTGAGCTGTCTGTTTaGATGGTGCACAAGGTCCAGGATGGTGTTCACTGCCCTCGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: PWATSFLGDRPELSV*MVHKVQDGVHCPRC Trigger: ACACCGAGGGCAGTGAACACCATCCTGGACCTTGTGCACCATGCAAACAGACAGCTCAGGGCGGTCTCCAAGGAAGCTAGTGGCCCAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | AACATTGATGCCATGGGTGACGAGGTCCTGTCGGAGTGTGTCACATaGCTCCAGCAAGGGCTGCCTTTCCTGGAGCTGCCGTTTCCGAGC | + |
|
Preference number: 1 (lower is better) Translates to: NIDAMGDEVLSECVT*LQQGLPFLELPFPS Trigger: GCTCGGAAACGGCAGCTCCAGGAAAGGCAGCCCTTGCTGGAGGCATGTGACACACTCCGACAGGACCTCGTCACCCATGGCATCAATGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 90 bp | GGGCCACTAGCTTCCTTGGAGACCGCCCTGAGCTGTCTGTTTGCATaGTGCACAAGGTCCAGGATGGTGTTCACTGCCCTCGGTGTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: GPLASLETALSCLFA*CTRSRMVFTALGVS Trigger: TGACACACCGAGGGCAGTGAACACCATCCTGGACCTTGTGCACCATGCAAACAGACAGCTCAGGGCGGTCTCCAAGGAAGCTAGTGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | GAGTCACCTGCTGGTGACAGGGGGTTGCTGAGTGAGGAGCCACAGTaGAGCTCTCTCCATGACAATGGCACATCCGCTCTGTGTATCTTC | + |
|
Preference number: 1 (lower is better) Translates to: ESPAGDRGLLSEEPQ*SSLHDNGTSALCIF Trigger: GAAGATACACAGAGCGGATGTGCCATTGTCATGGAGAGAGCTGCACTGTGGCTCCTCACTCAGCAACCCCCTGTCACCAGCAGGTGACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 90 bp | TCCCATGTGGAGGCTGCACTGCCTCTGTCCTTAACATTGATGCCATaGGTGACGAGGTCCTGTCGGAGTGTGTCACATGCCTCCAGCAAG | + |
|
Preference number: 1 (lower is better) Translates to: SHVEAALPLSLTLMP*VTRSCRSVSHASSK Trigger: CTTGCTGGAGGCATGTGACACACTCCGACAGGACCTCGTCACCCATGGCATCAATGTTAAGGACAGAGGCAGTGCAGCCTCCACATGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 90 bp | CTCGTGCATCCTCCACAAAAGAGGCCAGCCCCAGCAGGAGGTGCTTaGCTTCCACCAAGGTACTGTCACTGTATTCAATGGCTGACCTAT | + |
|
Preference number: 1 (lower is better) Translates to: LVHPPQKRPAPAGGA*LPPRYCHCIQWLTY Trigger: ATAGGTCAGCCATTGAATACAGTGACAGTACCTTGGTGGAAGCCAAGCACCTCCTGCTGGGGCTGGCCTCTTTTGTGGAGGATGCACGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | TTTCTGGTGTCTTGTCCTTGGATCCAGCAGTTCCCATGTGGAGGCTaGACTGCCTCTGTCCTTAACATTGATGCCATGGGTGACGAGGTC | + |
|
Preference number: 1 (lower is better) Translates to: FLVSCPWIQQFPCGG*TASVLNIDAMGDEV Trigger: GACCTCGTCACCCATGGCATCAATGTTAAGGACAGAGGCAGTGCAGCCTCCACATGGGAACTGCTGGATCCAAGGACAAGACACCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 90 bp | ACACTGGTGGAAGACTTCACTCTGCGCGATTTCATTTTCGTGATGTaGGAAAGCCAAGTCTATGCCGCCGGTGTGGATGTCCAGGTGGCT | + |
|
Preference number: 1 (lower is better) Translates to: TLVEDFTLRDFIFVM*ESQVYAAGVDVQVA Trigger: AGCCACCTGGACATCCACACCGGCGGCATAGACTTGGCTTTCCCACATCACGAAAATGAAATCGCGCAGAGTGAAGTCTTCCACCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| 3UTR TCA 90 bp | GAGTTCATCTACCACACAGCGCAACGTTACTGTGCTGCTGTCTCCTaGAACACACTGTCGATTTGCCAGAGAAATCCCAACAGTCTCGAA | + |
|
Preference number: 1 (lower is better) Translates to: EFIYHTAQRYCAAVS*NTLSICQRNPNSLE Trigger: TTCGAGACTGTTGGGATTTCTCTGGCAAATCGACAGTGTGTTTCAGGAGACAGCAGCACAGTAACGTTGCGCTGTGTGGTAGATGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 90 bp | CTCAGTGACTCTCAAATACACAGTTGGCGGCAGAACCTTCAGGGCTaGCATGTCTTGTTTAAATTCTTCCTCAAAAAGACTGGCGAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: LSDSQIHSWRQNLQG*HVLFKFFLKKTGER Trigger: TCTCTCGCCAGTCTTTTTGAGGAAGAATTTAAACAAGACATGGCAGCCCTGAAGGTTCTGCCGCCAACTGTGTATTTGAGAGTCACTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| 3UTR CCA 90 bp | AGCAATGATCTGAGGGATGTTCTCAGTGACTCTCAAATACACAGTTaGCGGCAGAACCTTCAGGGCTGCCATGTCTTGTTTAAATTCTTC | + |
|
Preference number: 1 (lower is better) Translates to: SNDLRDVLSDSQIHS*RQNLQGCHVLFKFF Trigger: GAAGAATTTAAACAAGACATGGCAGCCCTGAAGGTTCTGCCGCCAACTGTGTATTTGAGAGTCACTGAGAACATCCCTCAGATCATTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCGTTTCCGAGCCTCCCCAGCAGCCCCGGGTGTGTCCAGTGCATACTGGCGGAGTGCAGCTCTCTCCATaGCAATGGCACATCCGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: AVSEPPQQPRVCPVHTGGVQLSP*QWHIRS Trigger: AGAGCGGATGTGCCATTGTCATGGAGAGAGCTGCAC...TCCGCCAGTATGCACTGGACACACCCGGGGCTGCTGGGGAGGCTCGGAAACGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGCACTCGATGTGCCATCCAGGCCGTCCGTCTCCCCACGGCGAAGCCCAGAACCTCCTGAGGTTTGGCTaGCTTCCACAGGGCGAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: EHSMCHPGRPSPHGEAQNLLRFG*LPQGEV Trigger: GACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAG...GTTCTGGGCTTCGCCGTGGGGAGACGGACGGCCTGGATGGCACATCGAGTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGATGCAGCCACCTCATCCTCGGTCCCCAGGTTTCTGGTGTCTTGTCCTTGGACAGAAGGCCAGGGTATaGCAGCGCATGGGATGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GMQPPHPRSPGFWCLVLGQKARV*QRMGCS Trigger: GCTGCATCCCATGCGCTGCCATACCCTGGCCTTCTG...TCCAAGGACAAGACACCAGAAACCTGGGGACCGAGGATGAGGTGGCTGCATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR TCA 90 bp | CTGCTCAACGTAGGAAATGATGGCCCCAAACACAGTGGGACTCCTTGGGCCACTCAGGGGGTTGCTGAGTaGGGAGCCACAGTGCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LLNVGNDGPKHSGTPWATQGVAE*GATVQL Trigger: GAGCTGCACTGTGGCTCCTCACTCAGCAACCCCCTG...AGTGGCCCAAGGAGTCCCACTGTGTTTGGGGCCATCATTTCCTACGTTGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTTTCGTGATGTGGGAAAGCCAAGTCTATGCCGCCGGTGTGGATGTCCAGGTGGAGCGCAAGCACGTGTaGGCAGCCTCGACAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: IFVMWESQVYAAGVDVQVERKHV*AASTAG Trigger: CCCTGCTGTCGAGGCTGCTCACACGTGCTTGCGCTC...CACCTGGACATCCACACCGGCGGCATAGACTTGGCTTTCCCACATCACGAAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCAGCAGGAGGTGCTTGGCTTCCACCAAGGTACTGTCACTGTATTCAATGGCTGCCCAGAACACCTCCTaGGGTTTGGCTGCCTTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PSRRCLASTKVLSLYSMAAQNTS*GLAAFH Trigger: GTGGAAGGCAGCCAAACCTCAGGAGGTGTTCTGGGC...AGCCATTGAATACAGTGACAGTACCTTGGTGGAAGCCAAGCACCTCCTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTACGCAAGCAGAAAAGCCGGAAGACGTCAGGGGAGAAGGTCTTCAGGAAGTCACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: GTQAEKPEDVRGEGLQEVTGRSR*CAACQS Trigger: ACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGT...GACTTCCTGAAGACCTTCTCCCCTGACGTCTTCCGGCTTTTCTGCTTGCGTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGATGGCCCCAAACACAGTGGGACTCCTTGGGCCACTAGCTTCCTTGGAGACGCACAAGGTCCAGGATaGTGTTCACTGCCCTCGGTG | + |
|
Preference number: 2 (lower is better) Translates to: NDGPKHSGTPWATSFLGDAQGPG*CSLPSV Trigger: CACCGAGGGCAGTGAACACCATCCTGGACCTTGTGC...GTCTCCAAGGAAGCTAGTGGCCCAAGGAGTCCCACTGTGTTTGGGGCCATCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CAA 90 bp | GCTCGTGCATCCTCCACAAAAGAGGCCAGCCCCAGCAGGAGGTGCTaGGCTTCCACCAAGGTACTGTCACTGTATTCAATGGCTGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: ARASSTKEASPSRRC*ASTKVLSLYSMADL Trigger: TAGGTCAGCCATTGAATACAGTGACAGTACCTTGGTGGAAGCCAAGCACCTCCTGCTGGGGCTGGCCTCTTTTGTGGAGGATGCACGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CAA 90 bp | CTCGGTGTGTCAAAGTCATTGGCTAGAGCAGCTTTCACCGCCTTCTaGGTGCTAGTCAGCCTCTCCCATAGCACATCCTCCTCAACAGGG | + |
|
Preference number: 2 (lower is better) Translates to: LGVSKSLARAAFTAF*VLVSLSHSTSSSTG Trigger: CCCTGTTGAGGAGGATGTGCTATGGGAGAGGCTGACTAGCACCAAGAAGGCGGTGAAAGCTGCTCTAGCCAATGACTTTGACACACCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CAA 90 bp | ACAAGGTCCAGGATGGTGTTCACTGCCCTCGGTGTGTCAAAGTCATaGGCTAGAGCAGCTTTCACCGCCTTCTTGGTGCTAGTCAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: TRSRMVFTALGVSKS*ARAAFTAFLVLVSL Trigger: GAGGCTGACTAGCACCAAGAAGGCGGTGAAAGCTGCTCTAGCCAATGACTTTGACACACCGAGGGCAGTGAACACCATCCTGGACCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTCTGCGCGATTTCATTTTCGTGATGTGGGAAAGCCAAGTCTATGCCGCCGGTTTCCGAACACCTCACTaGAGGGCAGAGCGCAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: TLRDFIFVMWESQVYAAGFRTPH*RAERKH Trigger: GTGCTTGCGCTCTGCCCTGCAGTGAGGTGTTCGGAA...ACCGGCGGCATAGACTTGGCTTTCCCACATCACGAAAATGAAATCGCGCAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATACTTGTCCCCTCGGGCCAGAACCTTCAGGGCTaGCATGTCTTGTTTAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: CSGTGNRVDQLAILVPSGQNLQG*HVLFKF Trigger: GAATTTAAACAAGACATGGCAGCCCTGAAGGTTCTG...GCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCAGCAGGAGGTGCTTGGCTTCCACCAAGGTACTGTCACTGTATTCAATGGCTAGTGAGGAGCCACAGTaGAGCTCTCTCCATGACAAT | + |
|
Preference number: 2 (lower is better) Translates to: PSRRCLASTKVLSLYSMASEEPQ*SSLHDN Trigger: ATTGTCATGGAGAGAGCTGCACTGTGGCTCCTCACT...AGCCATTGAATACAGTGACAGTACCTTGGTGGAAGCCAAGCACCTCCTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTGTGCTGCTGTCTCCTGAAACACACTGTCGATTTGCCAGAGAAATCCCAACAAGCCCCAGCAGGAGGTaGTTGGCTTCCACCAAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: TVLLSPETHCRFAREIPTSPSRR*LASTKV Trigger: TACCTTGGTGGAAGCCAAGCACCTCCTGCTGGGGCT...TGTTGGGATTTCTCTGGCAAATCGACAGTGTGTTTCAGGAGACAGCAGCACAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCTCAACGTAGGAAATGATGGCCCCAAACACAGTGGGACTCCTTGGGCCACTGTGTGTCAAAGTCATTaGCTAGAGCAGCTTTCACCG | + |
|
Preference number: 2 (lower is better) Translates to: LLNVGNDGPKHSGTPWATVCQSH*LEQLSP Trigger: CGGTGAAAGCTGCTCTAGCCAATGACTTTGACACAC...AGTGGCCCAAGGAGTCCCACTGTGTTTGGGGCCATCATTTCCTACGTTGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGATGGCCCCAAACACAGTGGGACTCCTTGGGCCACTAGCTTCCTTGGAGACCACTGTATTCAATGGCTaGCCTATAGTTGGTACGCAA | + |
|
Preference number: 2 (lower is better) Translates to: MMAPNTVGLLGPLASLETTVFNG*PIVGTQ Trigger: TTGCGTACCAACTATAGGTCAGCCATTGAATACAGT...GGTCTCCAAGGAAGCTAGTGGCCCAAGGAGTCCCACTGTGTTTGGGGCCATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTTTCACATGCAAATGACCAGAATGTAGGAAGTAATTTCCCCACTGCTGACACACCTCCTGAGGTTTaGCTGCCTTCCACAGGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: CLSHANDQNVGSNFPTADTPPEV*LPSTGR Trigger: TCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGT...GTCAGCAGTGGGGAAATTACTTCCTACATTCTGGTCATTTGCATGTGAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CAA 90 bp | AGCGCAACGTTACTGTGCTGCTGTCTCCTGAAACACACTGTCGATTaGCCAGAGAAATCCCAACAGTCTCGAAAAACTGCTCAACGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SATLLCCCLLKHTVD*PEKSQQSRKTAQRR Trigger: CCTACGTTGAGCAGTTTTTCGAGACTGTTGGGATTTCTCTGGCAAATCGACAGTGTGTTTCAGGAGACAGCAGCACAGTAACGTTGCGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGCAGCCACCTCATCCTCGGTCCCCAGGTTTCTGGTGTCTTGTCCTTGGATCCACATCTTTTCTTCTGTaGCTTTCACATGCAAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: MQPPHPRSPGFWCLVLGSTSFLL*LSHAND Trigger: GTCATTTGCATGTGAAAGGCACAGAAGAAAAGATGT...GGATCCAAGGACAAGACACCAGAAACCTGGGGACCGAGGATGAGGTGGCTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | TCACATGCCTCCAGCAAGGGCTGCCTTTCCTGGAGCTaGCGTTTCCGAGCCTCCCCAGCAGCCCCGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SHASSKGCLSWS*RFRASPAAPGV Trigger: CACACCCGGGGCTGCTGGGGAGGCTCGGAAACGGCAGCTCCAGGAAAGGCAGCCCTTGCTGGAGGCATGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR TCA 72 bp | CGTCCGTCTCCCCACGGCGAAGCCCAGAACACCTCCTaGGGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RPSPHGEAQNTS*GLAAFHRAKSL Trigger: CAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGTTCTGGGCTTCGCCGTGGGGAGACGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | CCGAACACCTCACTGGCCATGGTAGAGCACTCGATGTaGCATCCAGGCCGTCCGTCTCCCCACGGCGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PNTSLAMVEHSM*HPGRPSPHGEA Trigger: GGCTTCGCCGTGGGGAGACGGACGGCCTGGATGGCACATCGAGTGCTCTACCATGGCCAGTGAGGTGTTCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | TTTCCGAGCCTCCCCAGCAGCCCCGGGTGTGTCCAGTaGATACTGGCGGACCTTCAGCCTGAAGCGCACGAG | + |
|
Preference number: 3 (lower is better) Translates to: FPSLPSSPGCVQ*ILADLQPEAHE Trigger: CTCGTGCGCTTCAGGCTGAAGGTCCGCCAGTATGCACTGGACACACCCGGGGCTGCTGGGGAGGCTCGGAAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 72 bp | CTCCCCACGGCGAAGCCCAGAACACCTCCTGAGGTTTaGCTGCCTTCCACAGGGCGAAGTCGCTGCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LPTAKPRTPPEV*LPSTGRSRCCA Trigger: GGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGTTCTGGGCTTCGCCGTGGGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | GGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTGCTGTaGCGCTTGTCAGAGTCACCTGCTGGTGACAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GLAAFHRAKSLL*RLSESPAGDRG Trigger: CCCCCTGTCACCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CAA 90 bp | GACGAGGTCCTGTCGGAGTGTGTCACATGCCTCCAGCAAGGGCTGCCTTTCCTGGGGCCACTAGCTTCCTaGGAGACCGCCCTGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DEVLSECVTCLQQGLPFLGPLAS*ETALSC Trigger: ACAGCTCAGGGCGGTCTCCAAGGAAGCTAGTGGCCC...CAGGAAAGGCAGCCCTTGCTGGAGGCATGTGACACACTCCGACAGGACCTCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | TCCTGTCGGAGTGTGTCACATGCCTCCAGCAAGGGCTaGCTTTCCTGGAGCTGCCGTTTCCGAGCCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SCRSVSHASSKG*LSWSCRFRASP Trigger: TGGGGAGGCTCGGAAACGGCAGCTCCAGGAAAGGCAGCCCTTGCTGGAGGCATGTGACACACTCCGACAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTTTCCGAGCCTCCCCAGCAGCCCCGGGTGTGTCCAGTGCATACTGGCGGACCGGTGTGTCAAAGTCATaGGCTAGAGCAGCTTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: RFRASPAAPGVSSAYWRTGVSKS*ARAAFT Trigger: GGTGAAAGCTGCTCTAGCCAATGACTTTGACACACC...GGTCCGCCAGTATGCACTGGACACACCCGGGGCTGCTGGGGAGGCTCGGAAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | CCTGAGGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGTCACCTGCTGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PEVWLPSTGRSR*CAACQSHLLVT Trigger: TGTCACCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGATGCAGCCACCTCATCCTCGGTCCCCAGGTTTCTGGTGTCTTGTCCTTGGCCCAGCAGGAGGTGCTaGGCTTCCACCAAGGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: WDAATSSSVPRFLVSCPWPSRRC*ASTKVL Trigger: CAGTACCTTGGTGGAAGCCAAGCACCTCCTGCTGGG...CCAAGGACAAGACACCAGAAACCTGGGGACCGAGGATGAGGTGGCTGCATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | GCTGGTGACAGGGGGTTGCTGAGTGAGGAGCCACAGTaGAGCTCTCTCCATGACAATGGCACATCCGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AGDRGLLSEEPQ*SSLHDNGTSAL Trigger: CAGAGCGGATGTGCCATTGTCATGGAGAGAGCTGCACTGTGGCTCCTCACTCAGCAACCCCCTGTCACCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 72 bp | GGGATGCAGCCACCTCATCCTCGGTCCCCAGGTTTCTaGTGTCTTGTCCTTGGATCCAGCAGTTCCCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: GMQPPHPRSPGF*CLVLGSSSSHV Trigger: CACATGGGAACTGCTGGATCCAAGGACAAGACACCAGAAACCTGGGGACCGAGGATGAGGTGGCTGCATCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | GCATCCTCCACAAAAGAGGCCAGCCCCAGCAGGAGGTaGTTGGCTTCCACCAAGGTACTGTCACTGTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: ASSTKEASPSRR*LASTKVLSLYS Trigger: TGAATACAGTGACAGTACCTTGGTGGAAGCCAAGCACCTCCTGCTGGGGCTGGCCTCTTTTGTGGAGGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | ACTAGCTTCCTTGGAGACCGCCCTGAGCTGTCTGTTTaGATGGTGCACAAGGTCCAGGATGGTGTTCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: TSFLGDRPELSV*MVHKVQDGVHC Trigger: GCAGTGAACACCATCCTGGACCTTGTGCACCATGCAAACAGACAGCTCAGGGCGGTCTCCAAGGAAGCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAAGAGCAGAAGGCCAGGGTATGGCAGCGCATGGGATGCAGCCACCTCATCCTCAGGTTTCTGGTGTCTaGTCCTTGGATCCAGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KRAEGQGMAAHGMQPPHPQVSGV*SLDPAV Trigger: AACTGCTGGATCCAAGGACAAGACACCAGAAACCTG...AGGATGAGGTGGCTGCATCCCATGCGCTGCCATACCCTGGCCTTCTGCTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCACTGGGAACCGTGTTGACCAGCTTGCCATACTTGTCCCCTCGGGCGTGCCAGGGCTGCCATGTCTaGTTTAAATTCTTCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VALGTVLTSLPYLSPRACQGCHV*FKFFLK Trigger: TTTGAGGAAGAATTTAAACAAGACATGGCAGCCCTG...GCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| 3UTR GCA 72 bp | TCTTGTCCTTGGATCCAGCAGTTCCCATGTGGAGGCTaGACTGCCTCTGTCCTTAACATTGATGCCATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SCPWIQQFPCGG*TASVLNIDAMG Trigger: ACCCATGGCATCAATGTTAAGGACAGAGGCAGTGCAGCCTCCACATGGGAACTGCTGGATCCAAGGACAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR TCA 72 bp | TACCACACAGCGCAACGTTACTGTGCTGCTGTCTCCTaGAACACACTGTCGATTTGCCAGAGAAATCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: YHTAQRYCAAVS*NTLSICQRNPN Trigger: GTTGGGATTTCTCTGGCAAATCGACAGTGTGTTTCAGGAGACAGCAGCACAGTAACGTTGCGCTGTGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CCA 72 bp | CTGAGGGATGTTCTCAGTGACTCTCAAATACACAGTTaGCGGCAGAACCTTCAGGGCTGCCATGTCTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LRDVLSDSQIHS*RQNLQGCHVLF Trigger: AAACAAGACATGGCAGCCCTGAAGGTTCTGCCGCCAACTGTGTATTTGAGAGTCACTGAGAACATCCCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| 3UTR TCA 72 bp | GGCTTCCACCAAGGTACTGTCACTGTATTCAATGGCTaGCCTATAGTTGGTACGCAAGCAGAAAAGCCGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GFHQGTVTVFNG*PIVGTQAEKPE Trigger: TTCCGGCTTTTCTGCTTGCGTACCAACTATAGGTCAGCCATTGAATACAGTGACAGTACCTTGGTGGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR GCA 72 bp | TCTCAAATACACAGTTGGCGGCAGAACCTTCAGGGCTaGCATGTCTTGTTTAAATTCTTCCTCAAAAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SQIHSWRQNLQG*HVLFKFFLKKT Trigger: AGTCTTTTTGAGGAAGAATTTAAACAAGACATGGCAGCCCTGAAGGTTCTGCCGCCAACTGTGTATTTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR TCA 90 bp | GCAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATACTTGTCCCCTCGGGCGTTGCGGCCGTTGCCATaGCCGCCCGCGCCGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVALGTVLTSLPYLSPRALRPLP*PPAPPE Trigger: CTCGGGCGGCGCGGGCGGTCATGGCAACGGCCGCAA...CGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR TCA 90 bp | GCCGTTTCCGAGCCTCCCCAGCAGCCCCGGGTGTGTCCAGTGCATACTGGCGGAGTGGGTGAGCAGGACTaGCGCCTCCACGCCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVSEPPQQPRVCPVHTGGVGEQD*RLHASR Trigger: CCTGCTGGCGTGGAGGCGTCAGTCCTGCTCACCCAC...TCCGCCAGTATGCACTGGACACACCCGGGGCTGCTGGGGAGGCTCGGAAACGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCCACAGCGCACGCTCACTCCCCGCAGCCCTCCTCAGGCTATAAAATATTTGCGGCCGTTGCCATaGCCGCCCGCGCCGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGPQRTLTPRSPPQAIKYLRPLP*PPAPPE Trigger: CTCGGGCGGCGCGGGCGGTCATGGCAACGGCCGCAA...ATATTTTATAGCCTGAGGAGGGCTGCGGGGAGTGAGCGTGCGCTGTGGACCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGCAGGGCAGAGCGCAAGCACGTGTGAGCAGCCTCGACAGCAGGGTCCACTGCACGCCGGTGTCCTaGCCTTGCGGCCGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLQGRAQARVSSLDSRVHCTPVS*PCGRCH Trigger: ATGGCAACGGCCGCAAGGCCAGGACACCGGCGTGCA...GTGGACCCTGCTGTCGAGGCTGCTCACACGTGCTTGCGCTCTGCCCTGCAGTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS-3UTR TCA 90 bp | AATGATGGCCCCAAACACAGTGGGACTCCTTGGGCCACTAGCTTCCTTGGAGACTTGCGGCCGTTGCCATaGCCGCCCGCGCCGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: NDGPKHSGTPWATSFLGDLRPLP*PPAPPE Trigger: CTCGGGCGGCGCGGGCGGTCATGGCAACGGCCGCAA...GTCTCCAAGGAAGCTAGTGGCCCAAGGAGTCCCACTGTGTTTGGGGCCATCATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCCAGGGTATGGCAGCGCATGGGATGCAGCCACCTCATCCTCGGTCCCCCCAGTGAGGCTGTTATaGACCTGCACGCCGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRPGYGSAWDAATSSSVPPVRLL*TCTPVS Trigger: GGACACCGGCGTGCAGGTGCATAACAGCCTCACTGG...GGGGACCGAGGATGAGGTGGCTGCATCCCATGCGCTGCCATACCCTGGCCTTCT 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR CCA 90 bp | AGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATACTTGTCCCCTCGGGCGTGTGCACGCCGGTGTCCTaGCCTTGCGGCCGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGTGNRVDQLAILVPSGVCTPVS*PCGRCH Trigger: ATGGCAACGGCCGCAAGGCCAGGACACCGGCGTGCA...CACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGGGTCCACAGCGCACGCTCACTCCCCGCAGCCCTCCTCAGGCTATAAACCAGTGAGGCTGTTATaGACCTGCACGCCGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAGSTAHAHSPQPSSGYKPVRLL*TCTPVS Trigger: GGACACCGGCGTGCAGGTGCATAACAGCCTCACTGG...TTTATAGCCTGAGGAGGGCTGCGGGGAGTGAGCGTGCGCTGTGGACCCTGCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS-3UTR GCA 90 bp | CTCACTGCAGGGCAGAGCGCAAGCACGTGTGAGCAGCCTCGACAGCAGGGTCCAACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTAGQSASTCEQPRQQGPTGRSR*CAACQS Trigger: ACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGT...TGGACCCTGCTGTCGAGGCTGCTCACACGTGCTTGCGCTCTGCCCTGCAGTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| 3UTR CAA 72 bp | GGCTCTGCAGTGGCACTGGGAACCGTGTTGACCAGCTaGCCATACTTGTCCCCTCGGGCGTGCAGATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSAVALGTVLTS*PYLSPRACRSK Trigger: CTTCGATCTGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGGGTCCACAGCGCACGCTCACTCCCCGCAGCCCTCCTCAGGCTATAAACACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TAGSTAHAHSPQPSSGYKHWEPC*PACHTC Trigger: ACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTG...TTTATAGCCTGAGGAGGGCTGCGGGGAGTGAGCGTGCGCTGTGGACCCTGCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS-3UTR TCA 90 bp | GCAGGGCAGAGCGCAAGCACGTGTGAGCAGCCTCGACAGCAGGGTCCACAGCGCATGAAAGCAATGATCTaGGGGATGTTCTCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: AGQSASTCEQPRQQGPQRMKAMI*GMFSVT Trigger: AGTCACTGAGAACATCCCTCAGATCATTGCTTTCAT...GCGCTGTGGACCCTGCTGTCGAGGCTGCTCACACGTGCTTGCGCTCTGCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGTTTCTGGTGTCTTGTCCTTGGATCCAGCAGTTCCCATGTGGAGGCTGAGTATCCACAGAGCCTaGCTCTGCAGTGGCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQVSGVLSLDPAVPMWRLSIHRA*LCSGTG Trigger: CCCAGTGCCACTGCAGAGCCAGGCTCTGTGGATACT...CAGCCTCCACATGGGAACTGCTGGATCCAAGGACAAGACACCAGAAACCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCACCTCATCCTCGGTCCCCAGGTTTCTGGTGTCTTGTCCTTGGATCCAGCCACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPPHPRSPGFWCLVLGSSHWEPC*PACHTC Trigger: ACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTG...GCTGGATCCAAGGACAAGACACCAGAAACCTGGGGACCGAGGATGAGGTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCGTGATGTGGGAAAGCCAAGTCTATGCCGCCGGTGTGGATGTCCAGGTGGCCCAGAACACCTCCTaGGGTTTGGCTGCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IFVMWESQVYAAGVDVQVAQNTS*GLAAFH Trigger: GTGGAAGGCAGCCAAACCTCAGGAGGTGTTCTGGGC...CACCTGGACATCCACACCGGCGGCATAGACTTGGCTTTCCCACATCACGAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| 3UTR CAA 72 bp | TCCCATGTGGAGGCTGCACTGCCTCTGTCCTTAACATaGATGCCATGGGTGACGAGGTCCTGTCGGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHVEAALPLSLT*MPWVTRSCRSV Trigger: CACACTCCGACAGGACCTCGTCACCCATGGCATCAATGTTAAGGACAGAGGCAGTGCAGCCTCCACATGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCTTGCGGCCGTTGCCATaGCCGCCCGCGCCGCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGLRPLP*PPAPPE Trigger: CTCGGGCGGCGCGGGCGGTCATGGCAACGGCCGCAA...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCCAGGGTATGGCAGCGCATGGGATGCAGCCACCTCATCCTCGGTCCCCATGAAAGCAATGATCTaGGGGATGTTCTCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: RRPGYGSAWDAATSSSVPMKAMI*GMFSVT Trigger: AGTCACTGAGAACATCCCTCAGATCATTGCTTTCAT...GGGGACCGAGGATGAGGTGGCTGCATCCCATGCGCTGCCATACCCTGGCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| 3UTR CAA 72 bp | AGGATGGTGTTCACTGCCCTCGGTGTGTCAAAGTCATaGGCTAGAGCAGCTTTCACCGCCTTCTTGGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RMVFTALGVSKS*ARAAFTAFLVL Trigger: TAGCACCAAGAAGGCGGTGAAAGCTGCTCTAGCCAATGACTTTGACACACCGAGGGCAGTGAACACCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAATTCTTCCTCAAAAAGACTGGCGAGAGAAGCGGGCGTCACGTTCATCTGCCAGTGAGGCTGTTATaGACCTGCACGCCGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKFFLKKTGERSGRHVHLPVRLL*TCTPVS Trigger: GGACACCGGCGTGCAGGTGCATAACAGCCTCACTGG...CAGATGAACGTGACGCCCGCTTCTCTCGCCAGTCTTTTTGAGGAAGAATTTAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR GCA 90 bp | CATGCAAATGACCAGAATGTAGGAAGTAATTTCCCCACTGCTGACACTGGTGGACTCCTGAGGTTTGGCTaGCTTCCACAGGGCGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HANDQNVGSNFPTADTGGLLRFG*LPQGEV Trigger: GACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAG...TCCACCAGTGTCAGCAGTGGGGAAATTACTTCCTACATTCTGGTCATTTGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS-3UTR CCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCTGCACGCCGGTGTCCTaGCCTTGCGGCCGTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGCTPVS*PCGRCH Trigger: ATGGCAACGGCCGCAAGGCCAGGACACCGGCGTGCA...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAATTCTTCCTCAAAAAGACTGGCGAGAGAAGCGGGCGTCACGTTCATCTGCCACAGGAGGACATCTaGGCACACAGGCCTTTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKFFLKKTGERSGRHVHLPQEDI*AHRPLV Trigger: CACTAAAGGCCTGTGTGCCCAGATGTCCTCCTGTGG...CAGATGAACGTGACGCCCGCTTCTCTCGCCAGTCTTTTTGAGGAAGAATTTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCGCCCAGAACACCTCCTaGGGTTTGGCTGCCTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGAQNTS*GLAAFH Trigger: GTGGAAGGCAGCCAAACCTCAGGAGGTGTTCTGGGC...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR GCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCGTCACCTGCTGGCTCTaGAGTGGCACTGGGAACCGT | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGVTCWL*SGTGNR Trigger: ACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGAC...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR GCA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCACCCGGGTGTGTCCAGTaGATACTGGCGGACCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FNIKFSSQKSRRPGYGSAPGCVQ*ILADLQ Trigger: CTGAAGGTCCGCCAGTATGCACTGGACACACCCGGG...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR TCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCCCTTGGAGACCGCCCTaGGCTGTCTGTTTGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGPWRPP*AVCLHG Trigger: ACCATGCAAACAGACAGCTCAGGGCGGTCTCCAAGG...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR GCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGTGRSR*CAACQS Trigger: ACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGT...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR GCA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCACTCCTGAGGTTTGGCTaGCTTCCACAGGGCGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNIKFSSQKSRRPGYGSALLRFG*LPQGEV Trigger: GACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAG...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR GCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCTCGGAGTGTGTCACATaGCTCCAGCAAGGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGSECVT*LQQGLP Trigger: AGGCAGCCCTTGCTGGAGGCATGTGACACACTCCGA...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCGCACAAGGTCCAGGATaGTGTTCACTGCCCTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGAQGPG*CSLPSV Trigger: CACCGAGGGCAGTGAACACCATCCTGGACCTTGTGC...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR GCA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGCCAGTGAGGCTGTTATaGACCTGCACGCCGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGPVRLL*TCTPVS Trigger: GGACACCGGCGTGCAGGTGCATAACAGCCTCACTGG...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR GCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCCTTGTCAGAGTCACCTaGTGGCTCTGCAGTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGLVRVT*WLCSGT Trigger: AGTGCCACTGCAGAGCCAGCAGGTGACTCTGACAAG...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CCA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGGTCAGAGTCACCTGCTaGCTCTGCAGTGGCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGVRVTC*LCSGTG Trigger: CCCAGTGCCACTGCAGAGCCAGCAGGTGACTCTGAC...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CCA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGAAGGGCTGCCTTTCCTaGAGCTGCCGTTTCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGKGCLS*SCRFRA Trigger: GGCTCGGAAACGGCAGCTCCAGGAAAGGCAGCCCTT...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CCA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCACGGTCCCCAGGTTTCTaGTGTCTTGTCCTTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: FNIKFSSQKSRRPGYGSARSPGF*CLVLGS Trigger: GGATCCAAGGACAAGACACCAGAAACCTGGGGACCG...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR TCA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCACACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FNIKFSSQKSRRPGYGSAHWEPC*PACHTC Trigger: ACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTG...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR GCA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGAGCCCCAGCAGGAGGTaGTTGGCTTCCACCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGSPSRR*LASTKV Trigger: TACCTTGGTGGAAGCCAAGCACCTCCTGCTGGGGCT...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CCA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGACACCTCCTGAGGTTTaGCTGCCTTCCACAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGTPPEV*LPSTGR Trigger: TCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGT...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| 3UTR CAA 72 bp | TTACTGTGCTGCTGTCTCCTGAAACACACTGTCGATTaGCCAGAGAAATCCCAACAGTCTCGAAAAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCCCLLKHTVD*PEKSQQSRKTA Trigger: AGCAGTTTTTCGAGACTGTTGGGATTTCTCTGGCAAATCGACAGTGTGTTTCAGGAGACAGCAGCACAGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR CCA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCACTGGTGTCTTGTCCTTaGATCCAGCAGTTCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FNIKFSSQKSRRPGYGSALVSCP*IQQFPC Trigger: ACATGGGAACTGCTGGATCCAAGGACAAGACACCAG...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR GCA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTTCCCATGTGGAGGCTaGACTGCCTCTGTCCTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGFPCGG*TASVLN Trigger: GTTAAGGACAGAGGCAGTGCAGCCTCCACATGGGAA...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CCA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCAGTGTGTCAAAGTCATTaGCTAGAGCAGCTTTCACCG | + |
|
Preference number: 4 (lower is better) Translates to: FNIKFSSQKSRRPGYGSAVCQSH*LEQLSP Trigger: CGGTGAAAGCTGCTCTAGCCAATGACTTTGACACAC...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR TCA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCAGAGGGATGTTCTCAGTaGCTCTCAAATACACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FNIKFSSQKSRRPGYGSAEGCSQ*LSNTQL Trigger: CAACTGTGTATTTGAGAGTCACTGAGAACATCCCTC...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCATGAAAGCAATGATCTaGGGGATGTTCTCAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGMKAMI*GMFSVT Trigger: AGTCACTGAGAACATCCCTCAGATCATTGCTTTCAT...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR TCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCACTGTATTCAATGGCTaGCCTATAGTTGGTACGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGTVFNG*PIVGTQ Trigger: TTGCGTACCAACTATAGGTCAGCCATTGAATACAGT...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR GCA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCCAGAACCTTCAGGGCTaGCATGTCTTGTTTAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGQNLQG*HVLFKF Trigger: GAATTTAAACAAGACATGGCAGCCCTGAAGGTTCTG...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR GCA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCAACATCTTTTCTTCTGTaGCTTTCACATGCAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FNIKFSSQKSRRPGYGSATSFLL*LSHAND Trigger: GTCATTTGCATGTGAAAGGCACAGAAGAAAAGATGT...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS GCA 90 bp | AGGCTGTTATGCACCTGCACGCCGGTGTCCTGGCCTTGCGGCCGTTaGCATGACCGCCCGCGCCGCCCGAGACCCAGCGCGGCCCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLCTCTPVSWPCGR*HDRPRRPRPSAARS Trigger: GCTCCGGGCCGCGCTGGGTCTCGGGCGGCGCGGGCGGTCATGGCAACGGCCGCAAGGCCAGGACACCGGCGTGCAGGTGCATAACAGCCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049461.7 ENSMUST00000209676.2 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS GCA 90 bp | CTGCCAGTGAGGCTGTTATGCACCTGCACGCCGGTGTCCTGGCCTTaGGGCCGTTGCCATGACCGCCCGCGCCGCCCGAGACCCAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: LPVRLLCTCTPVSWP*GRCHDRPRRPRPSA Trigger: CGCGCTGGGTCTCGGGCGGCGCGGGCGGTCATGGCAACGGCCGCAAGGCCAGGACACCGGCGTGCAGGTGCATAACAGCCTCACTGGCAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049461.7 ENSMUST00000209676.2 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS GCA 90 bp | GAGCGGGCCACTATCAGCGGCTCCTTCCTGCCAGTGAGGCTGTTATaGACCTGCACGCCGGTGTCCTGGCCTTGCGGCCGTTGCCATGAC | + |
|
Preference number: 5 (lower is better) Translates to: ERATISGSFLPVRLL*TCTPVSWPCGRCHD Trigger: GTCATGGCAACGGCCGCAAGGCCAGGACACCGGCGTGCAGGTGCATAACAGCCTCACTGGCAGGAAGGAGCCGCTGATAGTGGCCCGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049461.7 ENSMUST00000209676.2 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS GCA 90 bp | ACTGCTGAAGCTGTCAGAGCCCTGGCCATGGTAGAGCACTCGATGTaGCATCCAGGCCGTCCGTCTCCCCACGGCGAAGCCCAGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: TAEAVRALAMVEHSM*HPGRPSPHGEAQNT Trigger: GGTGTTCTGGGCTTCGCCGTGGGGAGACGGACGGCCTGGATGGCACATCGAGTGCTCTACCATGGCCAGGGCTCTGACAGCTTCAGCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS TCA 90 bp | GCGTGGATCTACCGGGCTGGCAGGGAGGGAGCAGGAACCAACTGCTaGAGCTGTCAGAGCCCTGGCCATGGTAGAGCACTCGATGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: AWIYRAGREGAGTNC*SCQSPGHGRALDVP Trigger: TGGCACATCGAGTGCTCTACCATGGCCAGGGCTCTGACAGCTTCAGCAGTTGGTTCCTGCTCCCTCCCTGCCAGCCCGGTAGATCCACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS GCA 90 bp | CTTCCACAGGGCGAAGTCGCTGCTGTGCCGCTTGTCAGAGTCACCTaGTGGCTCTGCAGTGGCACTGGGAACCGTGTTGACCAGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPQGEVAAVPLVRVT*WLCSGTGNRVDQLA Trigger: GGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS GCA 90 bp | AGAACACCTCCTGAGGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGTCACCTGCTGGCTCTGCAGTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RTPPEVWLPSTGRSR*CAACQSHLLALQWH Trigger: GTGCCACTGCAGAGCCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS GCA 90 bp | AGAACACCTCCTGAGGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGTCACCTGGCTCTGCAGTGGCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: RTPPEVWLPSTGRSR*CAACQSHLALQWHW Trigger: CCAGTGCCACTGCAGAGCCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGGAGGTGTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS CCA 90 bp | CCACAGGGCGAAGTCGCTGCTGTGCCGCTTGTCAGAGTCACCTGCTaGCTCTGCAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PQGEVAAVPLVRVTC*LCSGTGNRVDQLAI Trigger: TATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS CCA 90 bp | CCTCCACGCCAGCAGGCAGAGCAGAGCTGGAGTATCCACAGAGCCTaGCTCTGCAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: PPRQQAEQSWSIHRA*LCSGTGNRVDQLAI Trigger: TATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGCTCTGTGGATACTCCAGCTCTGCTCTGCCTGCTGGCGTGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS GCA 90 bp | ATGTGCATGGTCGTACACAGTCGGTCCACAGCTATACCAGGAGACTaGGTCCGAGCGGGCCACTATCAGCGGCTCCTTCCTGCCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: MCMVVHSRSTAIPGD*VRAGHYQRLLPASE Trigger: CTCACTGGCAGGAAGGAGCCGCTGATAGTGGCCCGCTCGGACGCAGTCTCCTGGTATAGCTGTGGACCGACTGTGTACGACCATGCACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049461.7 ENSMUST00000209676.2 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS GCA 90 bp | GGCGAAGTCGCTGCTGTGCCGCTTGTCAGAGTCACCTGCTGGCTCTaGAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GEVAAVPLVRVTCWL*SGTGNRVDQLAILV Trigger: GACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS GCA 90 bp | CGCCAGCAGGCAGAGCAGAGCTGGAGTATCCACAGAGCCTGGCTCTaGAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RQQAEQSWSIHRAWL*SGTGNRVDQLAILV Trigger: GACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGCTCTGTGGATACTCCAGCTCTGCTCTGCCTGCTGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS GCA 90 bp | CAGGGCGAAGTCGCTGCTGTGCCGCTTGTCAGAGTCACCTGGCTCTaGAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QGEVAAVPLVRVTWL*SGTGNRVDQLAILV Trigger: GACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS CCA 90 bp | CTTCCACAGGGCGAAGTCGCTGCTGTGCCGCTTGTCAGAGTCACCTaGCTCTGCAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: LPQGEVAAVPLVRVT*LCSGTGNRVDQLAI Trigger: TATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS TCA 90 bp | TGTCAGAGTCACCTGCTGGCTCTGCAGTGGCACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGTCCCCTCGGGCGTGCAGATCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: CQSHLLALQWHWEPC*PACHTCPLGRADRS Trigger: ACTTCGATCTGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGACTCTGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS TCA 90 bp | GAGTATCCACAGAGCCTGGCTCTGCAGTGGCACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGTCCCCTCGGGCGTGCAGATCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: EYPQSLALQWHWEPC*PACHTCPLGRADRS Trigger: ACTTCGATCTGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGCTCTGTGGATACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS TCA 90 bp | GCTTGTCAGAGTCACCTGGCTCTGCAGTGGCACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGTCCCCTCGGGCGTGCAGATCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ACQSHLALQWHWEPC*PACHTCPLGRADRS Trigger: ACTTCGATCTGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGTGACTCTGACAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTGGCACTGGGAACCGTGTTGACCAGCTTGCCATACTTGTCCCCTCGGGCGATCGCCATGACCACATaGCATCCAAACACTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AVALGTVLTSLPYLSPRAIAMTT*HPNTLV Trigger: GACCAGAGTGTTTGGATGCAATGTGGTCATGGCGAT...CGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR CAA 90 bp | GCAGGGCAGAGCGCAAGCACGTGTGAGCAGCCTCGACAGCAGGGTCCACAGCGCCAGGGCTGCCATGTCTaGTTTAAATTCTTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGQSASTCEQPRQQGPQRQGCHV*FKFFLK Trigger: TTTGAGGAAGAATTTAAACAAGACATGGCAGCCCTG...GCGCTGTGGACCCTGCTGTCGAGGCTGCTCACACGTGCTTGCGCTCTGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS-3UTR CAA 90 bp | GCCGTTTCCGAGCCTCCCCAGCAGCCCCGGGTGTGTCCAGTGCATACTGGCGGAATCTCGTTAGCTCTCTaGATTATTTTGTCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: AVSEPPQQPRVCPVHTGGISLAL*IILSST Trigger: CGTGGATGACAAAATAATCAAGAGAGCTAACGAGAT...TCCGCCAGTATGCACTGGACACACCCGGGGCTGCTGGGGAGGCTCGGAAACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR CAA 90 bp | GGGCAGAGCGCAAGCACGTGTGAGCAGCCTCGACAGCAGGGTCCACAGCGCACGATCTCGTTAGCTCTCTaGATTATTTTGTCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GQSASTCEQPRQQGPQRTISLAL*IILSST Trigger: CGTGGATGACAAAATAATCAAGAGAGCTAACGAGAT...CGTGCGCTGTGGACCCTGCTGTCGAGGCTGCTCACACGTGCTTGCGCTCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS GCA 90 bp | GGTGTCTTGTCCTTGGATCCAGCAGTTCCCATGTGGAGGCTGCACTaGCTCTTAACATTGATGCCATGGGTGACGAGGTCCTGTCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GVLSLDPAVPMWRLH*LLTLMPWVTRSCRS Trigger: ACTCCGACAGGACCTCGTCACCCATGGCATCAATGTTAAGAGGCAGTGCAGCCTCCACATGGGAACTGCTGGATCCAAGGACAAGACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211395.2 |
||
| CDS CCA 90 bp | CCCCAGGTTTCTGGTGTCTTGTCCTTGGATCCAGCAGTTCCCATGTaGAGGCTGCACTGCCTCTTAACATTGATGCCATGGGTGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PQVSGVLSLDPAVPM*RLHCLLTLMPWVTR Trigger: CCTCGTCACCCATGGCATCAATGTTAAGAGGCAGTGCAGCCTCCACATGGGAACTGCTGGATCCAAGGACAAGACACCAGAAACCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211395.2 |
||
| CDS CCA 90 bp | GCCACAGGAGGACATCTGGGCACACAGGCCTTTAGTGCTGGGACCTaGGTCTCGTTAGCTCTCTTGATTATTTTGTCATCCACGTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ATGGHLGTQAFSAGT*VSLALLIILSSTSV Trigger: TACCGACGTGGATGACAAAATAATCAAGAGAGCTAACGAGACCCAGGTCCCAGCACTAAAGGCCTGTGTGCCCAGATGTCCTCCTGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR CAA 90 bp | AATGATGGCCCCAAACACAGTGGGACTCCTTGGGCCACTAGCTTCCTTGGAGACATCGCCATGACCACATaGCATCCAAACACTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NDGPKHSGTPWATSFLGDIAMTT*HPNTLV Trigger: GACCAGAGTGTTTGGATGCAATGTGGTCATGGCGAT...GTCTCCAAGGAAGCTAGTGGCCCAAGGAGTCCCACTGTGTTTGGGGCCATCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR CAA 90 bp | AAAAGAGCAGAAGGCCAGGGTATGGCAGCGCATGGGATGCAGCCACCTCATCCTCAGGGCTGCCATGTCTaGTTTAAATTCTTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KRAEGQGMAAHGMQPPHPQGCHV*FKFFLK Trigger: TTTGAGGAAGAATTTAAACAAGACATGGCAGCCCTG...AGGATGAGGTGGCTGCATCCCATGCGCTGCCATACCCTGGCCTTCTGCTCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS-3UTR CAA 90 bp | CGATTTCATTTTCGTGATGTGGGAAAGCCAAGTCTATGCCGCCGGTGTGGATGTATCGCCATGACCACATaGCATCCAAACACTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RFHFRDVGKPSLCRRCGCIAMTT*HPNTLV Trigger: GACCAGAGTGTTTGGATGCAATGTGGTCATGGCGAT...ACATCCACACCGGCGGCATAGACTTGGCTTTCCCACATCACGAAAATGAAATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCAGGGCCACTAGCTTCCTaGGAGACCGCCCTGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FNIKFSSQKSRRPGYGSAGPLAS*ETALSC Trigger: ACAGCTCAGGGCGGTCTCCAAGGAAGCTAGTGGCCC...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CAA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCCCCAGCAGGAGGTGCTaGGCTTCCACCAAGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGPSRRC*ASTKVL Trigger: CAGTACCTTGGTGGAAGCCAAGCACCTCCTGCTGGG...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CAA 90 bp | ATTCTTCCTCAAAAAGACTGGCGAGAGAAGCGGGCGTCACGTTCATCTGAGCTCGTCTCGTTAGCTCTCTaGATTATTTTGTCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: ILPQKDWREKRASRSSELVSLAL*IILSST Trigger: CGTGGATGACAAAATAATCAAGAGAGCTAACGAGAC...GAGCTCAGATGAACGTGACGCCCGCTTCTCTCGCCAGTCTTTTTGAGGAAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCATCTGGTGTCTTGTCCTaGGATCCAGCAGTTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FNIKFSSQKSRRPGYGSASGVLS*DPAVPM Trigger: CATGGGAACTGCTGGATCCAAGGACAAGACACCAGA...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CAA 90 bp | GGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCGGTGTGTCAAAGTCATaGGCTAGAGCAGCTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GNFNIKFSSQKSRRPGYGGVSKS*ARAAFT Trigger: GGTGAAAGCTGCTCTAGCCAATGACTTTGACACACC...GCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CAA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGATCGCCATGACCACATaGCATCCAAACACTCTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGIAMTT*HPNTLV Trigger: GACCAGAGTGTTTGGATGCAATGTGGTCATGGCGAT...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCAAAACACACTGTCGATTaGCCAGAGAAATCCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: FNIKFSSQKSRRPGYGSAKHTVD*PEKSQQ Trigger: CTGTTGGGATTTCTCTGGCAAATCGACAGTGTGTTT...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CAA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGCAGGTTTCTGGTGTCTaGTCCTTGGATCCAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGQVSGV*SLDPAV Trigger: AACTGCTGGATCCAAGGACAAGACACCAGAAACCTG...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS-3UTR CAA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCAGCTCTCTTGATTATTTaGTCATCCACGTCGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: FNIKFSSQKSRRPGYGSAALLII*SSTSVM Trigger: CATTACCGACGTGGATGACAAAATAATCAAGAGAGC...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR CAA 90 bp | TTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGTATGGCAGCGCACAGGGCTGCCATGTCTaGTTTAAATTCTTCCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: FNIKFSSQKSRRPGYGSAQGCHV*FKFFLK Trigger: TTTGAGGAAGAATTTAAACAAGACATGGCAGCCCTG...TGCGCTGCCATACCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS-3UTR CAA 90 bp | ACAATTGGCAACTTTAATATAAAGTTTTCATCACAAAAGAGCAGAAGGCCAGGGATCTCGTTAGCTCTCTaGATTATTTTGTCATCCACG | + |
|
Preference number: 5 (lower is better) Translates to: TIGNFNIKFSSQKSRRPGISLAL*IILSST Trigger: CGTGGATGACAAAATAATCAAGAGAGCTAACGAGAT...CCCTGGCCTTCTGCTCTTTTGTGATGAAAACTTTATATTAAAGTTGCCAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 |
||
| CDS GCA 72 bp | TGCACCTGCACGCCGGTGTCCTGGCCTTGCGGCCGTTaGCATGACCGCCCGCGCCGCCCGAGACCCAGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: CTCTPVSWPCGR*HDRPRRPRPSA Trigger: CGCGCTGGGTCTCGGGCGGCGCGGGCGGTCATGGCAACGGCCGCAAGGCCAGGACACCGGCGTGCAGGTGCA 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049461.7 ENSMUST00000209676.2 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS CCA 72 bp | CCAGTGAGGCTGTTATGCACCTGCACGCCGGTGTCCTaGCCTTGCGGCCGTTGCCATGACCGCCCGCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PVRLLCTCTPVS*PCGRCHDRPRR Trigger: GCGGCGCGGGCGGTCATGGCAACGGCCGCAAGGCCAGGACACCGGCGTGCAGGTGCATAACAGCCTCACTGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049461.7 ENSMUST00000209676.2 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS GCA 72 bp | GCTGTCAGAGCCCTGGCCATGGTAGAGCACTCGATGTaGCATCCAGGCCGTCCGTCTCCCCACGGCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AVRALAMVEHSM*HPGRPSPHGEA Trigger: GGCTTCGCCGTGGGGAGACGGACGGCCTGGATGGCACATCGAGTGCTCTACCATGGCCAGGGCTCTGACAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS TCA 72 bp | CACCTGCTGGCTCTGCAGTGGCACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGTCCCCTCGGGCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: HLLALQWHWEPC*PACHTCPLGRA Trigger: TGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS TCA 72 bp | CAGAGCCTGGCTCTGCAGTGGCACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGTCCCCTCGGGCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSLALQWHWEPC*PACHTCPLGRA Trigger: TGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS GCA 72 bp | GCTGCTGTGCCGCTTGTCAGAGTCACCTGCTGGCTCTaGAGTGGCACTGGGAACCGTGTTGACCAGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AAVPLVRVTCWL*SGTGNRVDQLA Trigger: GGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGACTCTGACAAGCGGCACAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS GCA 72 bp | GGCGAAGTCGCTGCTGTGCCGCTTGTCAGAGTCACCTaGTGGCTCTGCAGTGGCACTGGGAACCGTGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: GEVAAVPLVRVT*WLCSGTGNRVD Trigger: GTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS GCA 72 bp | GGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTGCTGTaGCGCTTGTCAGAGTCACCTGCTGGCTCTGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLAAFHRAKSLL*RLSESPAGSAV Trigger: CACTGCAGAGCCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS GCA 72 bp | CCTGAGGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGTCACCTGCTGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PEVWLPSTGRSR*CAACQSHLLAL Trigger: CAGAGCCAGCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS GCA 72 bp | GTCGCTGCTGTGCCGCTTGTCAGAGTCACCTGGCTCTaGAGTGGCACTGGGAACCGTGTTGACCAGCTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VAAVPLVRVTWL*SGTGNRVDQLA Trigger: GGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGTGACTCTGACAAGCGGCACAGCAGCGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS GCA 72 bp | GGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTGCTGTaGCGCTTGTCAGAGTCACCTGGCTCTGCAGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLAAFHRAKSLL*RLSESPGSAVA Trigger: TGCCACTGCAGAGCCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS GCA 72 bp | CCTGAGGTTTGGCTGCCTTCCACAGGGCGAAGTCGCTaGTGTGCCGCTTGTCAGAGTCACCTGGCTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PEVWLPSTGRSR*CAACQSHLALQ Trigger: CTGCAGAGCCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCCCTGTGGAAGGCAGCCAAACCTCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS CCA 72 bp | GGCGAAGTCGCTGCTGTGCCGCTTGTCAGAGTCACCTaGCTCTGCAGTGGCACTGGGAACCGTGTTGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: GEVAAVPLVRVT*LCSGTGNRVDQ Trigger: CTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGTGACTCTGACAAGCGGCACAGCAGCGACTTCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS CAA 72 bp | TCACCTGCTGGCTCTGCAGTGGCACTGGGAACCGTGTaGACCAGCTTGCCATACTTGTCCCCTCGGGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SPAGSAVALGTV*TSLPYLSPRAC Trigger: GCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS TCA 72 bp | AGTCACCTGGCTCTGCAGTGGCACTGGGAACCGTGTTaGCCAGCTTGCCATACTTGTCCCCTCGGGCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SHLALQWHWEPC*PACHTCPLGRA Trigger: TGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGTGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS GCA 72 bp | GTCGTACACAGTCGGTCCACAGCTATACCAGGAGACTaGGTCCGAGCGGGCCACTATCAGCGGCTCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VVHSRSTAIPGD*VRAGHYQRLLP Trigger: AGGAAGGAGCCGCTGATAGTGGCCCGCTCGGACGCAGTCTCCTGGTATAGCTGTGGACCGACTGTGTACGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049461.7 ENSMUST00000209676.2 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS CAA 90 bp | GGAGTATCCACAGAGCCTGGCTCTGCAGTGGCACTGGGAACCGTGTaGACCAGCTTGCCATACTTGTCCCCTCGGGCGTGCAGATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GVSTEPGSAVALGTV*TSLPYLSPRACRSK Trigger: CTTCGATCTGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGCTCTGTGGATACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210478.2 |
||
| CDS CAA 90 bp | CGCTTGTCAGAGTCACCTGGCTCTGCAGTGGCACTGGGAACCGTGTaGACCAGCTTGCCATACTTGTCCCCTCGGGCGTGCAGATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RLSESPGSAVALGTV*TSLPYLSPRACRSK Trigger: CTTCGATCTGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGGTGACTCTGACAAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210599.2 |
||
| CDS CAA 90 bp | TTGTCAGAGTCACCTGCTGGCTCTGCAGTGGCACTGGGAACCGTGTaGACCAGCTTGCCATACTTGTCCCCTCGGGCGTGCAGATCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSESPAGSAVALGTV*TSLPYLSPRACRSK Trigger: CTTCGATCTGCACGCCCGAGGGGACAAGTATGGCAAGCTGGTCAACACGGTTCCCAGTGCCACTGCAGAGCCAGCAGGTGACTCTGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049461.7 |
||
| CDS CAA 90 bp | TGCAGCCACCTCATCCTCGGTCCCCAGGTTTCTGGTGTCTTGTCCTaGGATCCAGCAGTTCCCATGTGGAGGCTGCACTGCCTCTTAACA | + |
|
Preference number: 6 (lower is better) Translates to: CSHLILGPQVSGVLS*DPAVPMWRLHCLLT Trigger: TGTTAAGAGGCAGTGCAGCCTCCACATGGGAACTGCTGGATCCAAGGACAAGACACCAGAAACCTGGGGACCGAGGATGAGGTGGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211395.2 |
||
| CDS CAA 72 bp | GCAGTTCCCATGTGGAGGCTGCACTGCCTCTTAACATaGATGCCATGGGTGACGAGGTCCTGTCGGAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVPMWRLHCLLT*MPWVTRSCRSV Trigger: CACACTCCGACAGGACCTCGTCACCCATGGCATCAATGTTAAGAGGCAGTGCAGCCTCCACATGGGAACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211395.2 |
||
| CDS CAA 90 bp | TTGGATCCAGCAGTTCCCATGTGGAGGCTGCACTGCCTCTTAACATaGATGCCATGGGTGACGAGGTCCTGTCGGAGTGTGTCACATGCC | + |
|
Preference number: 6 (lower is better) Translates to: LDPAVPMWRLHCLLT*MPWVTRSCRSVSHA Trigger: GGCATGTGACACACTCCGACAGGACCTCGTCACCCATGGCATCAATGTTAAGAGGCAGTGCAGCCTCCACATGGGAACTGCTGGATCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211395.2 |
||
| CDS GCA 72 bp | TCCTTGGATCCAGCAGTTCCCATGTGGAGGCTGCACTaGCTCTTAACATTGATGCCATGGGTGACGAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLDPAVPMWRLH*LLTLMPWVTRS Trigger: GGACCTCGTCACCCATGGCATCAATGTTAAGAGGCAGTGCAGCCTCCACATGGGAACTGCTGGATCCAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211395.2 |
||
| CDS GCA 72 bp | GTCAAATCTAACATAGGAGCAAGCATGGCCAAGATGTaGATGGTCGTACACAGTCGGTCCACAGCTATACCA | + |
|
Preference number: 6 (lower is better) Translates to: VKSNIGASMAKM*MVVHSRSTAIP Trigger: TGGTATAGCTGTGGACCGACTGTGTACGACCATGCACATCTTGGCCATGCTTGCTCCTATGTTAGATTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049461.7 ENSMUST00000209676.2 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS CAA 72 bp | GGCGTCACGTTCATCTCGTTAGCTCTCTTGATTATTTaGTCATCCACGTCGGTAATGCTCATCGCCATGACC | + |
|
Preference number: 6 (lower is better) Translates to: GVTFISLALLII*SSTSVMLIAMT Trigger: GGTCATGGCGATGAGCATTACCGACGTGGATGACAAAATAATCAAGAGAGCTAACGAGATGAACGTGACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||
| CDS CAA 72 bp | GCCTTTAGTGCTGGGACCTGGGTCTCGTTAGCTCTCTaGATTATTTTGTCATCCACGTCGGTAATGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: AFSAGTWVSLAL*IILSSTSVMLI Trigger: GATGAGCATTACCGACGTGGATGACAAAATAATCAAGAGAGCTAACGAGACCCAGGTCCCAGCACTAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209676.2 |
||
| CDS CAA 72 bp | AGAGAAGCGGGCGTCACGTTCATCTCGTTAGCTCTCTaGATTATTTTGTCATCCACGTCGGTAATGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: REAGVTFISLAL*IILSSTSVMLI Trigger: GATGAGCATTACCGACGTGGATGACAAAATAATCAAGAGAGCTAACGAGATGAACGTGACGCCCGCTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049461.7 ENSMUST00000210478.2 ENSMUST00000210599.2 |
||