Pregenerated sensors for CARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010755Ensembl transcript IDs: ENSMUST00000010899.14, ENSMUST00000105909.4, ENSMUST00000208575.2
Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAACGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCGCAGTGTGTaGTCATCAGAGCCAGACAGCCAACTGAGTGGCTTTTGTCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: SNGPAGQLLWETRSV*SSEPDSQLSGFCLG Trigger: TCCCAGACAAAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR CCA 90 bp | CAATGTGAGGGAAATTCCTCGGGCAGGCTGGCTGAAGGGGCTCAATaGACTAGGAGGCCTAAGTTGCAAGCTGCTGACCAGGCGCCTGTA | + |
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Preference number: 1 (lower is better) Translates to: QCEGNSSGRLAEGAQ*TRRPKLQAADQAPV Trigger: TACAGGCGCCTGGTCAGCAGCTTGCAACTTAGGCCTCCTAGTCCATTGAGCCCCTTCAGCCAGCCTGCCCGAGGAATTTCCCTCACATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR GCA 90 bp | TCCAATACCACCAAATGTGCCAACACAGCAGAGATTAGCTCAGCTTaGCAATGTGAGGGAAATTCCTCGGGCAGGCTGGCTGAAGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: SNTTKCANTAEISSA*QCEGNSSGRLAEGA Trigger: AGCCCCTTCAGCCAGCCTGCCCGAGGAATTTCCCTCACATTGGCAAGCTGAGCTAATCTCTGCTGTGTTGGCACATTTGGTGGTATTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR TCA 90 bp | CTTGGGTTGGACCTAGACACACTTTATCTTACAAGCCAGTGGTTCTaGACTGGGCTTGCTGTCATAACGGCAGTCCCAGGCAGCTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LGLDLDTLYLTSQWF*TGLAVITAVPGSLP Trigger: TGGCAAGCTGCCTGGGACTGCCGTTATGACAGCAAGCCCAGTTCAGAACCACTGGCTTGTAAGATAAAGTGTGTCTAGGTCCAACCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR-3UTR GCA 90 bp | AACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGAGCCAGGCTGGCAGGTaGGCCCCTCCTGGGCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: NGSPRQLARAPPHTATVLSQAGR*APPGLP Trigger: CGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCT...CAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR CAA 90 bp | GCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGCTGGCCAGTaGCTCTGGGAAACCCGCAGTGTGTGCTCATCAGAGCCAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: ACQSPTPHSNGPAGQ*LWETRSVCSSEPDS Trigger: GCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR-3UTR GCA 90 bp | ACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCAGGCTGGCAGGTaGGCCCCTCCTGGGCTGCCG | + |
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Preference number: 2 (lower is better) Translates to: TTLPDSGVRTAVNMIRARSQAGR*APPGLP Trigger: CGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCT...CCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 ENSMUST00000208575.2 |
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| 3UTR-3UTR CCA 90 bp | CGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCGCAGTGTGTGCTCATCAGAGCCATTCCTCGGGCAGGCTaGCTGAAGGGGCTCAATGGA | + |
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Preference number: 2 (lower is better) Translates to: RSCWPVALGNPQCVLIRAIPRAG*LKGLNG Trigger: TCCATTGAGCCCCTTCAGCCAGCCTGCCCGAGGAAT...GGCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR-3UTR CCA 90 bp | GTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGCATCACGTGGTATCTTCATCTTaGCCAGCTTTGCTGCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: VHSSQAGRCAPPGLPWHHVVSSS*PALLLL Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATACCAC...GTGATGCCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGCATCACTGGAGGCCCATTCTGTAACATTTaGAGATACTCCTTGTACAGT | + |
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Preference number: 2 (lower is better) Translates to: AARLAGAPLLGCRGITGGPFCNI*RYSLYS Trigger: ACTGTACAAGGAGTATCTGCAAATGTTACAGAATGG...GCCTCCAGTGATGCCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGCATCACTACAGGAACATCTCACTaGGTGGTATCTTCATCTTGG | + |
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Preference number: 2 (lower is better) Translates to: SIAARLAGAPLLGCRGITTGTSH*VVSSSW Trigger: CCAAGATGAAGATACCACCCAGTGAGATGTTCCTGT...AGTGATGCCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGCATTTGTACAGTTTCTCCTaGGCTTCAAAGAGCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LVHSSQAGRCAPPGLPWHLYSFS*ASKSFF Trigger: GAAGAAGCTCTTTGAAGCCCAGGAGAAACTGTACAA...ATGCCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCTGCTACCACTCTGCCTaGTTCAGGTGTGAGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: LPDSGVRTAVNMIRARSLCYHSA*FRCENS Trigger: GCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCA...GAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 ENSMUST00000208575.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAACGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCGCAGTGTGTGCTCATCAGAGATTAGCTCAGCTTaGCAATGTGAGGGAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: SNGPAGQLLWETRSVCSSEISSA*QCEGNS Trigger: GGAATTTCCCTCACATTGGCAAGCTGAGCTAATCTC...TGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR-3UTR GCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAGCTTTGCTGCTTCTTaGTCCTGTTTCTTTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: QCPRAATTLPDSGVRTAVSFAAS*SCFFLA Trigger: GGCCAGAAAGAAACAGGAGCAAGAAGCAGCAAAGCT...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTACATCTTGGCCAGCTTTaGTGCTTCTTGCTCCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: QCPRAATTLPDSGVRTAVHLGQL*CFLLLF Trigger: AAACAGGAGCAAGAAGCAGCAAAGCTGGCCAAGATG...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCCATTCTGTAACATTTGCAGATACTCCTTGTACAGTTTCTCCTGGGCTTTCTTGGCCTGGCCCTTaGTCAGCTCTTTGCCTTCGG | + |
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Preference number: 2 (lower is better) Translates to: GCHSVTFADTPCTVSPGLSWPGP*SALCLR Trigger: CCGAAGGCAAAGAGCTGAGCAAGGGCCAGGCCAAGA...AAGCCCAGGAGAAACTGTACAAGGAGTATCTGCAAATGTTACAGAATGGCAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAATACCACCAAATGTGCCAACACAGCAGAGATTAGCTCAGCTTGCCAATGTTGCTACCACTCTGCCTaGTTCAGGTGTGAGAACAGC | + |
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Preference number: 2 (lower is better) Translates to: SNTTKCANTAEISSACQCCYHSA*FRCENS Trigger: GCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCA...ACATTGGCAAGCTGAGCTAATCTCTGCTGTGTTGGCACATTTGGTGGTATTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR CAA 90 bp | TGGCATCACTGGAGGCTGCCATTCTGTAACATTTGCAGATACTCCTaGTACAGTTTCTCCTGGGCTTCAAAGAGCTTCTTCAGCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: WHHWRLPFCNICRYS*YSFSWASKSFFSFL Trigger: CAAGAAGCTGAAGAAGCTCTTTGAAGCCCAGGAGAAACTGTACAAGGAGTATCTGCAAATGTTACAGAATGGCAGCCTCCAGTGATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTCGTGGGTAGGCAGACCATTTTCATCAAATTTAGAATACTTGTTGACTTCCTTGGCCAGCTTTGCTaGTTCTTGCTCCTGTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: GVVGRQTIFIKFRILVDFLGQLC*FLLLFL Trigger: AAGAAACAGGAGCAAGAAGCAGCAAAGCTGGCCAAG...GAAGTCAACAAGTATTCTAAATTTGATGAAAATGGTCTGCCTACCCACGACACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR GCA 72 bp | GCCCCACCCCACACAGCAACGGTCCTGCTGGCCAGTTaGTCTGGGAAACCCGCAGTGTGTGCTCATCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: APPHTATVLLAS*SGKPAVCAHQS Trigger: GCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCTGTGTGGGGTGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR GCA 72 bp | ATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTaGCGTGGCATCACTGGAGGCTGCCATTCTGTAACA | + |
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Preference number: 3 (lower is better) Translates to: IAARLAGAPLLG*RGITGGCHSVT Trigger: TGTTACAGAATGGCAGCCTCCAGTGATGCCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR CCA 72 bp | AGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTaGCATCACTGGAGGCTGCCATTCTGTAACATTTGC | + |
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Preference number: 3 (lower is better) Translates to: SQAGRCAPPGLP*HHWRLPFCNIC Trigger: GCAAATGTTACAGAATGGCAGCCTCCAGTGATGCCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR CCA 72 bp | ACCCCACACAGCAACGGTCCTGCTGGCCAGTTGCTCTaGGAAACCCGCAGTGTGTGCTCATCAGAGCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: TPHSNGPAGQLL*ETRSVCSSEPD Trigger: GTCTGGCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCTGTGTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR CCA 72 bp | GGCAGGTGCGCCCCTCCTGGGCTGCCGTGGCATCACTaGAGGCTGCCATTCTGTAACATTTGCAGATACTCC | + |
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Preference number: 3 (lower is better) Translates to: GRCAPPGLPWHH*RLPFCNICRYS Trigger: GGAGTATCTGCAAATGTTACAGAATGGCAGCCTCCAGTGATGCCACGGCAGCCCAGGAGGGGCGCACCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR TCA 72 bp | CCCGCAGTGTGTGCTCATCAGAGCCAGACAGCCAACTaGGTGGCTTTTGTCTGGGACTCAGGGGGATCCGTT | + |
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Preference number: 3 (lower is better) Translates to: PAVCAHQSQTAN*VAFVWDSGGSV Trigger: AACGGATCCCCCTGAGTCCCAGACAAAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR GCA 72 bp | CCTGCTGGCCAGTTGCTCTGGGAAACCCGCAGTGTGTaGTCATCAGAGCCAGACAGCCAACTGAGTGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: PAGQLLWETRSV*SSEPDSQLSGF Trigger: AAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR CCA 72 bp | CAGCTTGCCAATGTGAGGGAAATTCCTCGGGCAGGCTaGCTGAAGGGGCTCAATGGACTAGGAGGCCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: QLANVREIPRAG*LKGLNGLGGLS Trigger: ACTTAGGCCTCCTAGTCCATTGAGCCCCTTCAGCCAGCCTGCCCGAGGAATTTCCCTCACATTGGCAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR CCA 72 bp | CAGTGTGTGCTCATCAGAGCCAGACAGCCAACTGAGTaGCTTTTGTCTGGGACTCAGGGGGATCCGTTAGGC | + |
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Preference number: 3 (lower is better) Translates to: QCVLIRARQPTE*LLSGTQGDPLG Trigger: GCCTAACGGATCCCCCTGAGTCCCAGACAAAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR GCA 72 bp | ACCAAATGTGCCAACACAGCAGAGATTAGCTCAGCTTaGCAATGTGAGGGAAATTCCTCGGGCAGGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TKCANTAEISSA*QCEGNSSGRLA Trigger: AGCCAGCCTGCCCGAGGAATTTCCCTCACATTGGCAAGCTGAGCTAATCTCTGCTGTGTTGGCACATTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR TCA 72 bp | GACCTAGACACACTTTATCTTACAAGCCAGTGGTTCTaGACTGGGCTTGCTGTCATAACGGCAGTCCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: DLDTLYLTSQWF*TGLAVITAVPG Trigger: GCCTGGGACTGCCGTTATGACAGCAAGCCCAGTTCAGAACCACTGGCTTGTAAGATAAAGTGTGTCTAGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR GCA 72 bp | ACTTTATCTTACAAGCCAGTGGTTCTGAACTGGGCTTaGTGTCATAACGGCAGTCCCAGGCAGCTTGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: TLSYKPVVLNWA*CHNGSPRQLAR Trigger: TCTGGCAAGCTGCCTGGGACTGCCGTTATGACAGCAAGCCCAGTTCAGAACCACTGGCTTGTAAGATAAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR CCA 72 bp | AGCAAACAGGCAGGAGCAGGTGGACAGGAACACACTTaGGTTGGACCTAGACACACTTTATCTTACAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: SKQAGAGGQEHT*VGPRHTLSYKP Trigger: TGGCTTGTAAGATAAAGTGTGTCTAGGTCCAACCCAAGTGTGTTCCTGTCCACCTGCTCCTGCCTGTTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| 3UTR-3UTR CAA 90 bp | TGTAACATTTGCAGATACTCCTTGTACAGTTTCTCCTGGGCTTCAAAGAGCTTCCCCTTGCTCAGCTCTTaGCCTTCGGTGTCGTGGGTA | + |
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Preference number: 3 (lower is better) Translates to: CNICRYSLYSFSWASKSFPLLSS*PSVSWV Trigger: TACCCACGACACCGAAGGCAAAGAGCTGAGCAAGGG...GAAGCTCTTTGAAGCCCAGGAGAAACTGTACAAGGAGTATCTGCAAATGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTCTGTAACATTTGCAGATACTCCTTGTACAGTTTCTCCTGGGCTTCAAAGCAGCTTTGCTGCTTCTaGCTCCTGTTTCTTTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PFCNICRYSLYSFSWASKQLCCF*LLFLSG Trigger: GCCAGAAAGAAACAGGAGCAAGAAGCAGCAAAGCTG...CTTTGAAGCCCAGGAGAAACTGTACAAGGAGTATCTGCAAATGTTACAGAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| 3UTR TCA 72 bp | TTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTaGTTCAGGTGTGAGAACAGCTGTAAACATGATCAG | + |
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Preference number: 3 (lower is better) Translates to: LLSVSQSCYHSA*FRCENSCKHDQ Trigger: CTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 ENSMUST00000208575.2 |
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| 3UTR CCA 72 bp | TGTAACATTTGCAGATACTCCTTGTACAGTTTCTCCTaGGCTTCAAAGAGCTTCTTCAGCTTCTTGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: CNICRYSLYSFS*ASKSFFSFLAW Trigger: CCAGGCCAAGAAGCTGAAGAAGCTCTTTGAAGCCCAGGAGAAACTGTACAAGGAGTATCTGCAAATGTTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| CDS-3UTR CCA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGCCTTCAGGAGCTGGGTaGCTGGGGGTTTCTGCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWPSGAG*LGVSAP Trigger: GGGAGCAGAAACCCCCAGCCACCCAGCTCCTGAAGG...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR GCA 90 bp | ACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGCTGCAGGGCTCGTCTCTaGCTTGGGGGCCACCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TAVPGSLPEPHPTQQRSCCRARL*LGGHPG Trigger: TCCTGGGTGGCCCCCAAGGCAGAGACGAGCCCTGCA...GCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR GCA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGTCTTGGCCTGGCCCTTaGTCAGCTCTTTGCCTTCGG | + |
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Preference number: 4 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWSWPGP*SALCLR Trigger: CCGAAGGCAAAGAGCTGAGCAAGGGCCAGGCCAAGA...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CCA 90 bp | ACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGCCCAGGATGGCTCGCCTaGCTTGGAGGCCTTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: TAVPGSLPEPHPTQQRSCPGWLA*LGGLPQ Trigger: TTGTGGAAGGCCTCCAAGCCAGGCGAGCCATCCTGG...GCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR TCA 90 bp | CAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGCTGGCCGGCCTTTACTTGCTTaGAGCCTGCAGGGCTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: QSQAACQSPTPHSNGPAGRPLLA*SLQGSS Trigger: AGACGAGCCCTGCAGGCTTCAAGCAAGTAAAGGCCG...GCCAGCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR GCA 90 bp | TGGGCTTGCTGTCATAACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACTGTTGGTCCAGGGCCTaGACCCTGGCTGCCTCGTCA | + |
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Preference number: 4 (lower is better) Translates to: WACCHNGSPRQLARAPPHCWSRA*TLAASS Trigger: TGACGAGGCAGCCAGGGTGCAGGCCCTGGACCAACA...GTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTTATGACAGCAAGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | AGCTGTGGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGACATCCTTCAGGAGCTaGGTGGCTGGGGGTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: SCGLVHSSQAGRCAPPGLTSFRS*VAGGFC Trigger: GCAGAAACCCCCAGCCACCCAGCTCCTGAAGGATGT...CAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCCACAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| 3UTR CAA 72 bp | ACTGGGCTTGCTGTCATAACGGCAGTCCCAGGCAGCTaGCCAGAGCCCCACCCCACACAGCAACGGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TGLAVITAVPGS*PEPHPTQQRSC Trigger: GCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTTATGACAGCAAGCCCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR TCA 90 bp | AGAGCCCCACCCCACACAGCAACGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCGCGCTTCTATGTGCCTaGACCACCGAGCCACGTGGA | + |
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Preference number: 4 (lower is better) Translates to: RAPPHTATVLLASCSGKPALLCA*TTEPRG Trigger: TCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGC...GGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCTGTGTGGGGTGGGGCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR GCA 90 bp | ATAACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCGGAGGGGCCGAGAGCTaGCTGAACACGTCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: ITAVPGSLPEPHPTQQRSGGAES*LNTSTS Trigger: AGATGTGGACGTGTTCAGGCAGCTCTCGGCCCCTCC...GGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR GCA 90 bp | AGCTGTGGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGGTAGGCCTCCGACTGTaGCAGCTCATTGTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCGLVHSSQAGRCAPPGLVGLRL*QLIVMV Trigger: CACCATGACAATGAGCTGGCACAGTCGGAGGCCTAC...CAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCCACAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGAGTTTCACAGAGTTCTaGATCCGCTCCAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWSFTEF*IRSSIC Trigger: GCAGATGCTGGAGCGGATCCAGAACTCTGTGAAACT...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | ACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGCTCCGTTCAGCCTTCCTaGCTGCCATGTAGAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TAVPGSLPEPHPTQQRSCSVQPS*LPCRGC Trigger: GCAACCTCTACATGGCAGCCAGGAAGGCTGAACGGA...GCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGACTCGAGGTTCAGGTTaGTTCCAGGCCCACCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SCGLVHSSQAGRCAPPGLTRGSG*FQAHQL Trigger: CAGTTGGTGGGCCTGGAACCAACCTGAACCTCGAGT...CAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCCACAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| 3UTR CAA 72 bp | AGCCCCACCCCACACAGCAACGGTCCTGCTGGCCAGTaGCTCTGGGAAACCCGCAGTGTGTGCTCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPTPHSNGPAGQ*LWETRSVCSSE Trigger: CTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCTGTGTGGGGTGGGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTGCTGTCATAACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACCCCGCATCTCTTCCATaGCAGTCCGGGTGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: WACCHNGSPRQLARAPPHPASLP*QSGCQC Trigger: ACATTGACACCCGGACTGTCATGGAAGAGATGCGGG...GTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTTATGACAGCAAGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR TCA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGATACTTGTTGACTTCTaGCAGGAACATCTCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWILVDF*QEHLTG Trigger: CCCAGTGAGATGTTCCTGTCAGAAGTCAACAAGTAT...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | ACCCCACACAGCAACGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCGCAGTGTGAGGAGCGCTTCTATGTaGCTGAACCACCGAGCCACG | + |
|
Preference number: 4 (lower is better) Translates to: TPHSNGPAGQLLWETRSVRSASM*LNHRAT Trigger: CGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCT...CACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCTGTGTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGCTGAAAATGGCTTCATaGCATCACGGACATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWLKMAS*HHGHPS Trigger: TGAAGGATGTCCGTGATGCCATGAAGCCATTTTCAG...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | GCTTGCTGTCATAACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACACCCGGAGGGCATCACTaGGCTGTAGAACCTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ACCHNGSPRQLARAPPHTPGGHH*AVEPQE Trigger: TTCTTGAGGTTCTACAGCTCAGTGATGCCCTCCGGG...TGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTTATGACAGCAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | AACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGAGAGAGCAAGTCCTTTaGTTCCTCCAGCAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: NGSPRQLARAPPHTATVLREQVL*FLQQHL Trigger: CAGGTGTTGCTGGAGGAAGCAAAGGACTTGCTCTCT...CAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | CGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCGCAGTGTGTGCTCATCAGAGCCTTCCCCTTCCTGAAGTaGCTTCTGATCCCCAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSCWPVALGNPQCVLIRAFPFLK*LLIPNG Trigger: GCCGTTGGGGATCAGAAGGCACTTCAGGAAGGGGAA...GGCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | AGCTGTGGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGAGCTTTGCTGCTTCTTaGTCCTGTTTCTTTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SCGLVHSSQAGRCAPPGLSFAAS*SCFFLA Trigger: GGCCAGAAAGAAACAGGAGCAAGAAGCAGCAAAGCT...CAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCCACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | GCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGCTGGATACTTGTTGACTTCTaGCAGGAACATCTCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVPGSLPEPHPTQQRSCWILVDF*QEHLTG Trigger: CCCAGTGAGATGTTCCTGTCAGAAGTCAACAAGTAT...CCAGCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | CCAGTTGCTCTGGGAAACCCGCAGTGTGTGCTCATCAGAGCCAGACAGCCAACTGGCCTGCACCCTGGCTaGCTCGTCACTAATGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVALGNPQCVLIRARQPTGLHPG*LVTNAQ Trigger: CTGAGCATTAGTGACGAGGCAGCCAGGGTGCAGGCC...AGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | AGCTGTGGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGAAGATCTTCAGCATGTaGGTGAGGTACATGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SCGLVHSSQAGRCAPPGLKIFSM*VRYMAM Trigger: CATTGCCATGTACCTCACCCACATGCTGAAGATCTT...CAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCCACAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR TCA 90 bp | ACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGCACGTGGAAGAGCCTTaGGTCAGCGGGAGGGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TTLPDSGVRTAVNMIRARHVEEP*VSGRGR Trigger: TCGGCCCCTCCCGCTGACTCAAGGCTCTTCCACGTG...CCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | ATAACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCAGCTTTGCTGCTTCTTaGTCCTGTTTCTTTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITAVPGSLPEPHPTQQRSSFAAS*SCFFLA Trigger: GGCCAGAAAGAAACAGGAGCAAGAAGCAGCAAAGCT...GGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | ACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGCGCGTGCTGAGGTGTTaGTCCAGGGCCTGCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TTLPDSGVRTAVNMIRARRVLRC*SRACTL Trigger: CAGGGTGCAGGCCCTGGACCAACACCTCAGCACGCG...CCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | CCAGTTGCTCTGGGAAACCCGCAGTGTGTGCTCATCAGAGCCAGACAGCCAACTAACCACCGAGCCACGTaGAAGAGCCTTGAGTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVALGNPQCVLIRARQPTNHRAT*KSLESA Trigger: CGCTGACTCAAGGCTCTTCCACGTGGCTCGGTGGTT...AGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | ACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGCCAGCAGAGCCCGGTTaGGCCTCCTCCGTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTLPDSGVRTAVNMIRARPAEPG*ASSVQP Trigger: AGGCTGAACGGAGGAGGCCCAACCGGGCTCTGCTGG...CCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CCA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGCCAGCAGAGCCCGGTTaGGCCTCCTCCGTTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRAATTLPDSGVRTAVNMPAEPG*ASSVQP Trigger: AGGCTGAACGGAGGAGGCCCAACCGGGCTCTGCTGG...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CCA 90 bp | AACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGAAGATCTTCAGCATGTaGGTGAGGTACATGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NGSPRQLARAPPHTATVLKIFSM*VRYMAM Trigger: CATTGCCATGTACCTCACCCACATGCTGAAGATCTT...CAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | AGCTGTGGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGTTGTACAGTTTCTCCTaGGCTTCAAAGAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SCGLVHSSQAGRCAPPGLLYSFS*ASKSFF Trigger: GAAGAAGCTCTTTGAAGCCCAGGAGAAACTGTACAA...CAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCCACAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR GCA 90 bp | GGAAACCCGCAGTGTGTGCTCATCAGAGCCAGACAGCCAACTGAGTGGCTTTTGTCTTGGCCTGGCCCTTaGTCAGCTCTTTGCCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GNPQCVLIRARQPTEWLLSWPGP*SALCLR Trigger: CCGAAGGCAAAGAGCTGAGCAAGGGCCAGGCCAAGA...CAAAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR TCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTATATAGCTACGCGTGCTaGGGTGTTGGTCCAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QCPRAATTLPDSGVRTAVYSYAC*GVGPGP Trigger: AGGCCCTGGACCAACACCTCAGCACGCGTAGCTATA...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR TCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCAGGGCCGAGAGCTGCCTaGACACGTCCACATCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRAGPRAA*TRPHLP Trigger: AGGCAGATGTGGACGTGTTCAGGCAGCTCTCGGCCC...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | ACTTTATCTTACAAGCCAGTGGTTCTGAACTGGGCTTGCTGTCATAACGGCAGTGGCTCGTCTCTGCCTTaGGGGCCACCCAGGAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLSYKPVVLNWACCHNGSGSSLP*GPPRSA Trigger: AGCGCTCCTGGGTGGCCCCCAAGGCAGAGACGAGCC...ACTGCCGTTATGACAGCAAGCCCAGTTCAGAACCACTGGCTTGTAAGATAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACCTTCAGGAGCTGGGTaGCTGGGGGTTTCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRAPSGAG*LGVSAP Trigger: GGGAGCAGAAACCCCCAGCCACCCAGCTCCTGAAGG...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR TCA 90 bp | TGGGAAACCCGCAGTGTGTGCTCATCAGAGCCAGACAGCCAACTGAGTGGCTTTTTTCAAACTGGCCAGTaGTGTCTACAGGGGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: WETRSVCSSEPDSQLSGFFQTGQ*CLQGLG Trigger: TCCGAGCCCCTGTAGACATCACTGGCCAGTTTGAAA...AAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCCCA 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR TCA 90 bp | GCTTGCTGTCATAACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACATTCGTACTCCCTCTCTaGATTCTGATAACACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ACCHNGSPRQLARAPPHTFVLPL*ILITPE Trigger: TTCAGGTGTTATCAGAATTCAGAGAGGGAGTACGAA...TGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTTATGACAGCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR TCA 90 bp | CTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCCCCGGAGGGCATCACTaGGCTGTAGAACCTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPDSGVRTAVNMIRARSLPGGHH*AVEPQE Trigger: TTCTTGAGGTTCTACAGCTCAGTGATGCCCTCCGGG...GAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 ENSMUST00000208575.2 |
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| CDS-3UTR GCA 90 bp | GGAAACCCGCAGTGTGTGCTCATCAGAGCCAGACAGCCAACTGAGTGGCTTTTGTACTTGCTTGAAGCCTaGAGGGCTCGTCTCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNPQCVLIRARQPTEWLLYLLEA*RARLCL Trigger: AAGGCAGAGACGAGCCCTGCAGGCTTCAAGCAAGTA...CAAAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTATGTCAGTCACCTCACTaGCACCTGTGGAATCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QCPRAATTLPDSGVRTAVCQSPH*HLWNPA Trigger: GGCTGGATTCCACAGGTGGCAGTGAGGTGACTGACA...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR GCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAGTCAAGTGGCCCGTGTaGAAGAAGTACCTGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCPRAATTLPDSGVRTAVVKWPV*KKYLTQ Trigger: CTGGGTCAGGTACTTCTTGCACACGGGCCACTTGAC...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CCA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTACATCCTTCAGGAGCTaGGTGGCTGGGGGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVRTAVNMIRARSLSTSFRS*VAGGFC Trigger: GCAGAAACCCCCAGCCACCCAGCTCCTGAAGGATGT...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CCA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGCCAGCTCATTGTCATaGTGGGGGAAGCGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YQCPRAATTLPDSGVRTAASSLS*WGKRRS Trigger: TGACCTCCGCTTCCCCCACCATGACAATGAGCTGGC...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAGTTGGCAGCCCTTCATaGTCTTCAAACCGGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QCPRAATTLPDSGVRTAVVGSPS*SSNRTP Trigger: TGGGGTCCGGTTTGAAGACCATGAAGGGCTGCCAAC...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCTTTCAAACTGGCCAGTaGTGTCTACAGGGGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPDSGVRTAVNMIRARSLFQTGQ*CLQGLG Trigger: TCCGAGCCCCTGTAGACATCACTGGCCAGTTTGAAA...GAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTCCCGCATCTCTTCCATaGCAGTCCGGGTGTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVRTAVNMIRARSLSPASLP*QSGCQC Trigger: ACATTGACACCCGGACTGTCATGGAAGAGATGCGGG...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTGCTCATCAGAGCCAGACAGCCAACTGAGTGGCTTTTGTCTGGGACTCAGAGGTTGCACTGACTaGCCAAAGCCCGCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVCSSEPDSQLSGFCLGLRGCTD*PKPASL Trigger: AAGAGATGCGGGCTTTGGTCAGTCAGTGCAACCTCT...GAGTCCCAGACAAAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTTGTCAGTCACCTCACTaGCACCTGTGGAATCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YQCPRAATTLPDSGVRTACQSPH*HLWNPA Trigger: GGCTGGATTCCACAGGTGGCAGTGAGGTGACTGACA...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGTTCCCCTTCCTGAAGTaGCTTCTGATCCCCAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: PRAATTLPDSGVRTAVNMFPFLK*LLIPNG Trigger: GCCGTTGGGGATCAGAAGGCACTTCAGGAAGGGGAA...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTGGCGGTCAGCAGAGATaGTCAGATCACCTTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVRTAVNMIRARSLSGGQQR*SDHLPL Trigger: AAGGGGAAGGTGATCTGAGCATCTCTGCTGACCGCC...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAGCAGAACACTCTATGTaGCATCCGGGACGACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QCPRAATTLPDSGVRTAVAEHSM*HPGRPF Trigger: AAAGGGTCGTCCCGGATGGCACATAGAGTGTTCTGC...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGGTAGGCCTCCGACTGTaGCAGCTCATTGTCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRAATTLPDSGVRTAVNMVGLRL*QLIVMV Trigger: CACCATGACAATGAGCTGGCACAGTCGGAGGCCTAC...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGACCAGACCTCACCGTTCAGAAGAATTTATTATCAGTGTCCCAGAGCTCAGGAGCTGGGTGGCTaGGGGTTTCTGCTCCCGATA | + |
|
Preference number: 4 (lower is better) Translates to: RADQTSPFRRIYYQCPRAQELGG*GFLLPI Trigger: TATCGGGAGCAGAAACCCCCAGCCACCCAGCTCCTG...AGCTCTGGGACACTGATAATAAATTCTTCTGAACGGTGAGGTCTGGTCTGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | GGAAACCCGCAGTGTGTGCTCATCAGAGCCAGACAGCCAACTGAGTGGCTTTTGAGTTTCACAGAGTTCTaGATCCGCTCCAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GNPQCVLIRARQPTEWLLSFTEF*IRSSIC Trigger: GCAGATGCTGGAGCGGATCCAGAACTCTGTGAAACT...CAAAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCAGCCAGCTCATTGTCATaGTGGGGGAAGCGGAGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRAASSLS*WGKRRS Trigger: TGACCTCCGCTTCCCCCACCATGACAATGAGCTGGC...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTTCCGTTCAGCCTTCCTaGCTGCCATGTAGAGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVRTAVNMIRARSLSSVQPS*LPCRGC Trigger: GCAACCTCTACATGGCAGCCAGGAAGGCTGAACGGA...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | CTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCGGCTCTCCTCCTCTATaGCCCCAAAGATCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPDSGVRTAVNMIRARSLGSPPL*PQRSSA Trigger: TGCTGAAGATCTTTGGGGCCATAGAGGAGGAGAGCC...GAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTTGGCAGCCCTTCATaGTCTTCAAACCGGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YQCPRAATTLPDSGVRTAVGSPS*SSNRTP Trigger: TGGGGTCCGGTTTGAAGACCATGAAGGGCTGCCAAC...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTAGAGGTTGCACTGACTaGCCAAAGCCCGCATCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YQCPRAATTLPDSGVRTARGCTD*PKPASL Trigger: AAGAGATGCGGGCTTTGGTCAGTCAGTGCAACCTCT...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTCCTGAAGGTAGGGCATaGCTGTTGACTCGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YQCPRAATTLPDSGVRTAPEGRA*LLTRGS Trigger: TGAACCTCGAGTCAACAGTCATGCCCTACCTTCAGG...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGGCAGAACACTCTATGTaGCATCCGGGACGACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRAATTLPDSGVRTAVNMAEHSM*HPGRPF Trigger: AAAGGGTCGTCCCGGATGGCACATAGAGTGTTCTGC...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTTTCAGCCTTCCTGGCTaGCATGTAGAGGTTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVRTAVNMIRARSLSFSLPG*HVEVAL Trigger: CAGTGCAACCTCTACATGGCAGCCAGGAAGGCTGAA...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | TTTGTCTGGGACTCAGGGGGATCCGTTAGGCTGAGTCGGCCTTTTCCCTACTCCGCTTCCATGTCTTTGTaGAACTCTTCTTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FVWDSGGSVRLSRPFPYSASMSL*NSSSQN Trigger: GTTCTGGGAAGAAGAGTTCCACAAAGACATGGAAGC...GGAGTAGGGAAAAGGCCGACTCAGCCTAACGGATCCCCCTGAGTCCCAGACAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGACCAGGATGGCTCGCCTaGCTTGGAGGCCTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: IYYQCPRAATTLPDSGVRPGWLA*LGGLPQ Trigger: TTGTGGAAGGCCTCCAAGCCAGGCGAGCCATCCTGG...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | AGTGTGTGCTCATCAGAGCCAGACAGCCAACTGAGTGGCTTTTGTCTGGGACTCTCTTCAGCATGTGGGTaGGGTACATGGCAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SVCSSEPDSQLSGFCLGLSSACG*GTWQCS Trigger: AGAACATTGCCATGTACCTCACCCACATGCTGAAGA...GAGTCCCAGACAAAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAGACCAGACCTCACCGTTCAGAAGAATTTATTATCAGTGTCCCAGAGGGCGGTCAGCAGAGATaGTCAGATCACCTTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGQTRPHRSEEFIISVPEGGQQR*SDHLPL Trigger: AAGGGGAAGGTGATCTGAGCATCTCTGCTGACCGCC...CTCTGGGACACTGATAATAAATTCTTCTGAACGGTGAGGTCTGGTCTGCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR GCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCATTCAGCCTTCCTGGCTaGCATGTAGAGGTTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRAFSLPG*HVEVAL Trigger: CAGTGCAACCTCTACATGGCAGCCAGGAAGGCTGAA...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGCACAGCCTGTTCCAGTaGTTCTGTGGCAAGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRAATTLPDSGVRTAVNMHSLFQ*FCGKFH Trigger: GTGAAACTTGCCACAGAACCACTGGAACAGGCTGTG...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCAAGCTCATTGTCATGGTaGGGGAAGCGGAGGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRASSLSW*GKRRSN Trigger: GTTTGACCTCCGCTTCCCCCACCATGACAATGAGCT...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCAGGCTCTCCTCCTCTATaGCCCCAAAGATCTTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRAGSPPL*PQRSSA Trigger: TGCTGAAGATCTTTGGGGCCATAGAGGAGGAGAGCC...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTCAACTTCACCACTGTTaGCAGCCCTTCATGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVRTAVNMIRARSLSQLHHC*QPFMVF Trigger: GAAGACCATGAAGGGCTGCCAACAGTGGTGAAGTTG...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTTTGCCTTCGGTGTCGTaGGTAGGCAGACCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVRTAVNMIRARSLSLPSVS*VGRPFS Trigger: TGAAAATGGTCTGCCTACCCACGACACCGAAGGCAA...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCTGTGCAAGAAGTACCTaGCCCAGCAGTCATTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LPDSGVRTAVNMIRARSLCARST*PSSHFQ Trigger: TTGAAAATGACTGCTGGGTCAGGTACTTCTTGCACA...GAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTTCTTCAGCATGTGGGTaGGGTACATGGCAATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YQCPRAATTLPDSGVRTASSACG*GTWQCS Trigger: AGAACATTGCCATGTACCTCACCCACATGCTGAAGA...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAGTCAAGTGGCCCGTGTaGAAGAAGTACCTGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYYQCPRAATTLPDSGVRVKWPV*KKYLTQ Trigger: CTGGGTCAGGTACTTCTTGCACACGGGCCACTTGAC...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGCTTGGCCAGCTTTGCTaGTTCTTGCTCCTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRAATTLPDSGVRTAVNMLGQLC*FLLLFL Trigger: AAGAAACAGGAGCAAGAAGCAGCAAAGCTGGCCAAG...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGCATCTTGGCCAGCTTTaGTGCTTCTTGCTCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRAATTLPDSGVRTAVNMHLGQL*CFLLLF Trigger: AAACAGGAGCAAGAAGCAGCAAAGCTGGCCAAGATG...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | AGACACACTTTATCTTACAAGCCAGTGGTTCTGAACTGGGCTTGCTGTCATAACACGTCCACATCTGCCTaGGATAGGGAGTACCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RHTLSYKPVVLNWACCHNTSTSA*DREYPW Trigger: CCAGGGGTACTCCCTATCCCAGGCAGATGTGGACGT...GTTATGACAGCAAGCCCAGTTCAGAACCACTGGCTTGTAAGATAAAGTGTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACTCGAGGTTCAGGTTaGTTCCAGGCCCACCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: IYYQCPRAATTLPDSGVRTRGSG*FQAHQL Trigger: CAGTTGGTGGGCCTGGAACCAACCTGAACCTCGAGT...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAACAGGAACATCTCACTaGGTGGTATCTTCATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCPRAATTLPDSGVRTAVTGTSH*VVSSSW Trigger: CCAAGATGAAGATACCACCCAGTGAGATGTTCCTGT...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCATTGCCTTCGGTGTCGTaGGTAGGCAGACCATTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRALPSVS*VGRPFS Trigger: TGAAAATGGTCTGCCTACCCACGACACCGAAGGCAA...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | ACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGTGTGCAAGAAGTACCTaGCCCAGCAGTCATTTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TTLPDSGVRTAVNMIRARCARST*PSSHFQ Trigger: TTGAAAATGACTGCTGGGTCAGGTACTTCTTGCACA...CCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR TCA 90 bp | ACCAGACCTCACCGTTCAGAAGAATTTATTATCAGTGTCCCAGAGCTGCTACCACCTGAAGGTAGGGCATaGCTGTTGACTCGAGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRPHRSEEFIISVPELLPPEGRA*LLTRGS Trigger: TGAACCTCGAGTCAACAGTCATGCCCTACCTTCAGG...TGGTAGCAGCTCTGGGACACTGATAATAAATTCTTCTGAACGGTGAGGTCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CCA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTCTGAAAATGGCTTCATaGCATCACGGACATCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PDSGVRTAVNMIRARSLSLKMAS*HHGHPS Trigger: TGAAGGATGTCCGTGATGCCATGAAGCCATTTTCAG...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTTCCAGTGGTTCTGTaGCAAGTTTCACAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YQCPRAATTLPDSGVRTAVPVVL*QVSQSS Trigger: AGAACTCTGTGAAACTTGCCACAGAACCACTGGAAC...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCCACAGCCTGTTCCAGTaGTTCTGTGGCAAGTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RAATTLPDSGVRTAVNMIHSLFQ*FCGKFH Trigger: GTGAAACTTGCCACAGAACCACTGGAACAGGCTGTG...GATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGCTTCCATGTCTTTGTaGAACTCTTCTTCCCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YQCPRAATTLPDSGVRTAASMSL*NSSSQN Trigger: GTTCTGGGAAGAAGAGTTCCACAAAGACATGGAAGC...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAGTTTTTCAGTGACTTaGACATCTTGCAGCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: QCPRAATTLPDSGVRTAVSFSVT*TSCSLL Trigger: TAGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACT...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGGTGGTATCTTCATCTTaGCCAGCTTTGCTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PRAATTLPDSGVRTAVNMVVSSS*PALLLL Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATACCAC...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAAGAGAGCAAGTCCTTTaGTTCCTCCAGCAACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYYQCPRAATTLPDSGVRREQVL*FLQQHL Trigger: CAGGTGTTGCTGGAGGAAGCAAAGGACTTGCTCTCT...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | TGGGAAACCCGCAGTGTGTGCTCATCAGAGCCAGACAGCCAACTGAGTGGCTTTCCATTCTGTAACATTTaGAGATACTCCTTGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: WETRSVCSSEPDSQLSGFPFCNI*RYSLYS Trigger: ACTGTACAAGGAGTATCTGCAAATGTTACAGAATGG...AAAGCCACTCAGTTGGCTGTCTGGCTCTGATGAGCACACACTGCGGGTTTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR TCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCATTCGTACTCCCTCTCTaGATTCTGATAACACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRAFVLPL*ILITPE Trigger: TTCAGGTGTTATCAGAATTCAGAGAGGGAGTACGAA...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGACTTGGCCAGCTTTGCTaGTTCTTGCTCCTGTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYYQCPRAATTLPDSGVRLGQLC*FLLLFL Trigger: AAGAAACAGGAGCAAGAAGCAGCAAAGCTGGCCAAG...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR GCA 90 bp | CTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCCCATTCTGTAACATTTaGAGATACTCCTTGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPDSGVRTAVNMIRARSLPFCNI*RYSLYS Trigger: ACTGTACAAGGAGTATCTGCAAATGTTACAGAATGG...GAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CCA 90 bp | AGACACACTTTATCTTACAAGCCAGTGGTTCTGAACTGGGCTTGCTGTCATAACCAACTTCACCACTGTTaGCAGCCCTTCATGGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RHTLSYKPVVLNWACCHNQLHHC*QPFMVF Trigger: GAAGACCATGAAGGGCTGCCAACAGTGGTGAAGTTG...GTTATGACAGCAAGCCCAGTTCAGAACCACTGGCTTGTAAGATAAAGTGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCATTGTACAGTTTCTCCTaGGCTTCAAAGAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRALYSFS*ASKSFF Trigger: GAAGAAGCTCTTTGAAGCCCAGGAGAAACTGTACAA...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR TCA 90 bp | AGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCGATAAAGTTTTTCAGTaGCTTGGACATCTTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RAATTLPDSGVRTAVNMIDKVFQ*LGHLAA Trigger: GGCTGCAAGATGTCCAAGTCACTGAAAAACTTTATC...GATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR TCA 90 bp | TGGGTAGGCAGACCATTTTCATCAAATTTAGAATACTTGTTGACTTCTGACAGGCCCGGAGGGCATCACTaGGCTGTAGAACCTCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVGRPFSSNLEYLLTSDRPGGHH*AVEPQE Trigger: TTCTTGAGGTTCTACAGCTCAGTGATGCCCTCCGGG...CCTGTCAGAAGTCAACAAGTATTCTAAATTTGATGAAAATGGTCTGCCTACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| CDS-3UTR CCA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAGTTCCAGTGGTTCTGTaGCAAGTTTCACAGAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IYYQCPRAATTLPDSGVRVPVVL*QVSQSS Trigger: AGAACTCTGTGAAACTTGCCACAGAACCACTGGAAC...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CCA 90 bp | ACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGTTGTCCACAATCTTCTaGACGAAGTTCACAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTLPDSGVRTAVNMIRARLSTIF*TKFTIS Trigger: AGAAATTGTGAACTTCGTCCAGAAGATTGTGGACAA...CCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| 3UTR CAA 72 bp | TGGAGGCTGCCATTCTGTAACATTTGCAGATACTCCTaGTACAGTTTCTCCTGGGCTTCAAAGAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WRLPFCNICRYS*YSFSWASKSFF Trigger: GAAGAAGCTCTTTGAAGCCCAGGAGAAACTGTACAAGGAGTATCTGCAAATGTTACAGAATGGCAGCCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208575.2 |
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| CDS-3UTR TCA 90 bp | ACCAGACCTCACCGTTCAGAAGAATTTATTATCAGTGTCCCAGAGCTGCTACCAGATAAAGTTTTTCAGTaGCTTGGACATCTTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: TRPHRSEEFIISVPELLPDKVFQ*LGHLAA Trigger: GGCTGCAAGATGTCCAAGTCACTGAAAAACTTTATC...TGGTAGCAGCTCTGGGACACTGATAATAAATTCTTCTGAACGGTGAGGTCTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCATTGTCCACAATCTTCTaGACGAAGTTCACAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATTLPDSGVRTAVNMIRALSTIF*TKFTIS Trigger: AGAAATTGTGAACTTCGTCCAGAAGATTGTGGACAA...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CCA 90 bp | ACCAGACCTCACCGTTCAGAAGAATTTATTATCAGTGTCCCAGAGCTGCTACCAAGTTTTTCAGTGACTTaGACATCTTGCAGCCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: TRPHRSEEFIISVPELLPSFSVT*TSCSLL Trigger: TAGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACT...TGGTAGCAGCTCTGGGACACTGATAATAAATTCTTCTGAACGGTGAGGTCTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CCA 90 bp | AGACACACTTTATCTTACAAGCCAGTGGTTCTGAACTGGGCTTGCTGTCATAACGTGGTATCTTCATCTTaGCCAGCTTTGCTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RHTLSYKPVVLNWACCHNVVSSS*PALLLL Trigger: AAGAAGCAGCAAAGCTGGCCAAGATGAAGATACCAC...GTTATGACAGCAAGCCCAGTTCAGAACCACTGGCTTGTAAGATAAAGTGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CAA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGTCCAGCAGAGCCCGGTaGGGCCTCCTCCGTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWSSRAR*GLLRSA Trigger: GGCTGAACGGAGGAGGCCCAACCGGGCTCTGCTGGA...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | AGAGCCCCACCCCACACAGCAACGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCCCACGTGGAAGAGCCTaGAGTCAGCGGGAGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RAPPHTATVLLASCSGKPPRGRA*SQREGP Trigger: CGGCCCCTCCCGCTGACTCAAGGCTCTTCCACGTGG...GGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCTGTGTGGGGTGGGGCTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS TCA 90 bp | GCTCGTCTCTGCCTTGGGGGCCACCCAGGAGCGCTTCTATGTGCCTaGACCACCGAGCCACGTGGAAGAGCCTTGAGTCAGCGGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARLCLGGHPGALLCA*TTEPRGRALSQREG Trigger: CCCCTCCCGCTGACTCAAGGCTCTTCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCTGGGTGGCCCCCAAGGCAGAGACGAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS CCA 90 bp | GGGCCACCCAGGAGCGCTTCTATGTGCCTGAACCACCGAGCCACGTaGAAGAGCCTTGAGTCAGCGGGAGGGGCCGAGAGCTGCCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GPPRSASMCLNHRAT*KSLESAGGAESCLN Trigger: GTTCAGGCAGCTCTCGGCCCCTCCCGCTGACTCAAGGCTCTTCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCTGGGTGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS GCA 90 bp | CGAGCCACGTGGAAGAGCCTTGAGTCAGCGGGAGGGGCCGAGAGCTaGCTGAACACGTCCACATCTGCCTGGGATAGGGAGTACCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RATWKSLESAGGAES*LNTSTSAWDREYPW Trigger: CCAGGGGTACTCCCTATCCCAGGCAGATGTGGACGTGTTCAGGCAGCTCTCGGCCCCTCCCGCTGACTCAAGGCTCTTCCACGTGGCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS GCA 90 bp | CAGGGCTCGTCTCTGCCTTGGGGGCCACCCAGGAGCGCTTCTATGTaGCTGAACCACCGAGCCACGTGGAAGAGCCTTGAGTCAGCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGSSLPWGPPRSASM*LNHRATWKSLESAG Trigger: TCCCGCTGACTCAAGGCTCTTCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCTGGGTGGCCCCCAAGGCAGAGACGAGCCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CAA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGCAGCTTTGCTGCTTCTaGCTCCTGTTTCTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWQLCCF*LLFLSG Trigger: GCCAGAAAGAAACAGGAGCAAGAAGCAGCAAAGCTG...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 90 bp | GAGCGCTTCTATGTGCCTGAACCACCGAGCCACGTGGAAGAGCCTTaGGTCAGCGGGAGGGGCCGAGAGCTGCCTGAACACGTCCACATC | + |
|
Preference number: 5 (lower is better) Translates to: ERFYVPEPPSHVEEP*VSGRGRELPEHVHI Trigger: GATGTGGACGTGTTCAGGCAGCTCTCGGCCCCTCCCGCTGACTCAAGGCTCTTCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS GCA 90 bp | ATTGAGGCTCCCAGGAGCGTGCCTGCCATAGCAGAACACTCTATGTaGCATCCGGGACGACCCTTTCCCCAGGGGCAAGGCCAGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: IEAPRSVPAIAEHSM*HPGRPFPQGQGQDG Trigger: GCCATCCTGGCCTTGCCCCTGGGGAAAGGGTCGTCCCGGATGGCACATAGAGTGTTCTGCTATGGCAGGCACGCTCCTGGGAGCCTCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | AGCAACGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCGCAGTGTGTGCTCATCAACGCGTGCTGAGGTGTaGGTCCAGGGCCTGCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: SNGPAGQLLWETRSVCSSTRAEV*VQGLHP Trigger: AGGGTGCAGGCCCTGGACCAACACCTCAGCACGCGT...TGATGAGCACACACTGCGGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CAA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGAGCAACACCTGTACTTaGCTGTCTACTTCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWSNTCT*LSTSSP Trigger: TGGAGAGGAAGTAGACAGCAAAGTACAGGTGTTGCT...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | GCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGCTGGCCAACTTCACCACTGTaGGCAGCCCTTCATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVPGSLPEPHPTQQRSCWPTSPL*AALHGL Trigger: AAGACCATGAAGGGCTGCCAACAGTGGTGAAGTTGG...CCAGCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS TCA 90 bp | CCACGTGGAAGAGCCTTGAGTCAGCGGGAGGGGCCGAGAGCTGCCTaGACACGTCCACATCTGCCTGGGATAGGGAGTACCCCTGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: PRGRALSQREGPRAA*TRPHLPGIGSTPGY Trigger: ATATCCAGGGGTACTCCCTATCCCAGGCAGATGTGGACGTGTTCAGGCAGCTCTCGGCCCCTCCCGCTGACTCAAGGCTCTTCCACGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS GCA 90 bp | CTCCAGCAGAGCCCGGTTGGGCCTCCTCCGTTCAGCCTTCCTGGCTaGCATGTAGAGGTTGCACTGACTGACCAAAGCCCGCATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQQSPVGPPPFSLPG*HVEVALTDQSPHLF Trigger: GAAGAGATGCGGGCTTTGGTCAGTCAGTGCAACCTCTACATGGCAGCCAGGAAGGCTGAACGGAGGAGGCCCAACCGGGCTCTGCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | GGCCTAGTCCATAGCAGCCAGGCTGGCAGGTGCGCCCCTCCTGGGCTGCCGTGGATTTGCAGATACTCCTaGTACAGTTTCTCCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLVHSSQAGRCAPPGLPWICRYS*YSFSWA Trigger: AGCCCAGGAGAAACTGTACAAGGAGTATCTGCAAAT...CCACGGCAGCCCAGGAGGGGCGCACCTGCCAGCCTGGCTGCTATGGACTAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS GCA 90 bp | ATAGCTACGCGTGCTGAGGTGTTGGTCCAGGGCCTGCACCCTGGCTaGCTCGTCACTAATGCTCAGAATGGACCTGTAGTCGGCAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IATRAEVLVQGLHPG*LVTNAQNGPVVGSL Trigger: CAGGCTGCCGACTACAGGTCCATTCTGAGCATTAGTGACGAGGCAGCCAGGGTGCAGGCCCTGGACCAACACCTCAGCACGCGTAGCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CAA 90 bp | AGAGCCCCACCCCACACAGCAACGGTCCTGCTGGCCAGTTGCTCTGGGAAACCCCAGAGAGCAAGTCCTTaGCTTCCTCCAGCAACACCT | + |
|
Preference number: 5 (lower is better) Translates to: RAPPHTATVLLASCSGKPQRASP*LPPATP Trigger: AGGTGTTGCTGGAGGAAGCAAAGGACTTGCTCTCTG...GGGTTTCCCAGAGCAACTGGCCAGCAGGACCGTTGCTGTGTGGGGTGGGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CAA 90 bp | GCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGCTGGAAGTTTTTCAGTGACTaGGACATCTTGCAGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: AVPGSLPEPHPTQQRSCWKFFSD*DILQPA Trigger: AGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACTT...CCAGCAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS-3UTR CAA 90 bp | AACGGCAGTCCCAGGCAGCTTGCCAGAGCCCCACCCCACACAGCAACGGTCCTGATTTGCAGATACTCCTaGTACAGTTTCTCCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: NGSPRQLARAPPHTATVLICRYS*YSFSWA Trigger: AGCCCAGGAGAAACTGTACAAGGAGTATCTGCAAAT...CAGGACCGTTGCTGTGTGGGGTGGGGCTCTGGCAAGCTGCCTGGGACTGCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS TCA 90 bp | ATGGTGGGGGAAGCGGAGGTCAAACCCTCCACCATGAATGTCCATTaGGGCTCCCAGGAGCGTGCCTGCCATAGCAGAACACTCTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: MVGEAEVKPSTMNVH*GSQERACHSRTLYV Trigger: CACATAGAGTGTTCTGCTATGGCAGGCACGCTCCTGGGAGCCTCAATGGACATTCATGGTGGAGGGTTTGACCTCCGCTTCCCCCACCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 90 bp | AGCTCATTGTCATGGTGGGGGAAGCGGAGGTCAAACCCTCCACCATaGATGTCCATTGAGGCTCCCAGGAGCGTGCCTGCCATAGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSLSWWGKRRSNPPP*MSIEAPRSVPAIAE Trigger: TTCTGCTATGGCAGGCACGCTCCTGGGAGCCTCAATGGACATTCATGGTGGAGGGTTTGACCTCCGCTTCCCCCACCATGACAATGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGATCCAGCAGAGCCCGGTaGGGCCTCCTCCGTTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: IYYQCPRAATTLPDSGVRSSRAR*GLLRSA Trigger: GGCTGAACGGAGGAGGCCCAACCGGGCTCTGCTGGA...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | CTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCTTCTTGGCCTGGCCCTaGCTCAGCTCTTTGCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPDSGVRTAVNMIRARSLFLAWP*LSSLPS Trigger: CGAAGGCAAAGAGCTGAGCAAGGGCCAGGCCAAGAA...GAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 90 bp | TCTTGCAGCCTGCTATCGTCAAGTGGCCCGTGTGCAAGAAGTACCTaGCCCAGCAGTCATTTTCAAAGTAGGCCTCCGACTGTGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCSLLSSSGPCARST*PSSHFQSRPPTVPA Trigger: AGCTGGCACAGTCGGAGGCCTACTTTGAAAATGACTGCTGGGTCAGGTACTTCTTGCACACGGGCCACTTGACGATAGCAGGCTGCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | ACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGCCCTTGCTCAGCTCTTaGCCTTCGGTGTCGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TTLPDSGVRTAVNMIRARPLLSS*PSVSWV Trigger: TACCCACGACACCGAAGGCAAAGAGCTGAGCAAGGG...CCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTCAGAGAGCAAGTCCTTaGCTTCCTCCAGCAACACCT | + |
|
Preference number: 5 (lower is better) Translates to: YQCPRAATTLPDSGVRTAQRASP*LPPATP Trigger: AGGTGTTGCTGGAGGAAGCAAAGGACTTGCTCTCTG...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | AGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCGACTCGAGGTTCAGGTaGGTTCCAGGCCCACCAACT | + |
|
Preference number: 5 (lower is better) Translates to: RAATTLPDSGVRTAVNMIDSRFR*VPGPPT Trigger: AGTTGGTGGGCCTGGAACCAACCTGAACCTCGAGTC...GATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | TATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTCCAACTTCACCACTGTaGGCAGCCCTTCATGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YQCPRAATTLPDSGVRTAPTSPL*AALHGL Trigger: AAGACCATGAAGGGCTGCCAACAGTGGTGAAGTTGG...AGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CAA 90 bp | CAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTATTGGAGAAAATCGAGTaGTCAGTCACCTCACTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QCPRAATTLPDSGVRTAVLEKIE*SVTSLP Trigger: TGGCAGTGAGGTGACTGACAACTCGATTTTCTCCAA...TACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGAGGGCTTCCATGTCTTaGTGGAACTCTTCTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PRAATTLPDSGVRTAVNMRASMS*WNSSSQ Trigger: CTGGGAAGAAGAGTTCCACAAAGACATGGAAGCCCT...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CAA 90 bp | ACCAGACCTCACCGTTCAGAAGAATTTATTATCAGTGTCCCAGAGCTGCTACCAGACTCGAGGTTCAGGTaGGTTCCAGGCCCACCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TRPHRSEEFIISVPELLPDSRFR*VPGPPT Trigger: AGTTGGTGGGCCTGGAACCAACCTGAACCTCGAGTC...TGGTAGCAGCTCTGGGACACTGATAATAAATTCTTCTGAACGGTGAGGTCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGCAGCTTTGCTGCTTCTaGCTCCTGTTTCTTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRAATTLPDSGVRTAVNMQLCCF*LLFLSG Trigger: GCCAGAAAGAAACAGGAGCAAGAAGCAGCAAAGCTG...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CAA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGACCCTTGCTCAGCTCTTaGCCTTCGGTGTCGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: IYYQCPRAATTLPDSGVRPLLSS*PSVSWV Trigger: TACCCACGACACCGAAGGCAAAGAGCTGAGCAAGGG...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS CCA 90 bp | TCTTCATCTTGGCCAGCTTTGCTGCTTCTTGCTCCTGTTTCTTTCTaGCCGCCTCCTCTTTCTTCCTCCTCTTCTCTTCTTCAGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSSWPALLLLAPVSF*PPPLSSSSSLLQPF Trigger: AAAGGGCTGAAGAAGAGAAGAGGAGGAAGAAAGAGGAGGCGGCCAGAAAGAAACAGGAGCAAGAAGCAGCAAAGCTGGCCAAGATGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
||
| CDS-3UTR CAA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCATCATCTTGGCCAGCTTaGCTGCTTCTTGCTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ATTLPDSGVRTAVNMIRASSWPA*LLLAPV Trigger: AACAGGAGCAAGAAGCAGCAAAGCTGGCCAAGATGA...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | GCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCAAGCAACACCTGTACTTaGCTGTCTACTTCCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: ATTLPDSGVRTAVNMIRASNTCT*LSTSSP Trigger: TGGAGAGGAAGTAGACAGCAAAGTACAGGTGTTGCT...TGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | CCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGTCTTCTTCCCAGAACTaGGGCAGTTTGGAGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: PRAATTLPDSGVRTAVNMSSSQN*GSLEKI Trigger: GATTTTCTCCAAACTGCCCAAGTTCTGGGAAGAAGA...CATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CCA 90 bp | AAGTTTTTCAGTGACTTGGACATCTTGCAGCCTGCTATCGTCAAGTaGCCCGTGTGCAAGAAGTACCTGACCCAGCAGTCATTTTCAAAG | + |
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Preference number: 5 (lower is better) Translates to: KFFSDLDILQPAIVK*PVCKKYLTQQSFSK Trigger: CTTTGAAAATGACTGCTGGGTCAGGTACTTCTTGCACACGGGCCACTTGACGATAGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | AGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCTTGGAGAAAATCGAGTaGTCAGTCACCTCACTGCCA | + |
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Preference number: 5 (lower is better) Translates to: RAATTLPDSGVRTAVNMILEKIE*SVTSLP Trigger: TGGCAGTGAGGTGACTGACAACTCGATTTTCTCCAA...GATCATGTTTACAGCTGTTCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGATCATCTTGGCCAGCTTaGCTGCTTCTTGCTCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: IYYQCPRAATTLPDSGVRSSWPA*LLLAPV Trigger: AACAGGAGCAAGAAGCAGCAAAGCTGGCCAAGATGA...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | CCTGATTCAGGTGTGAGAACAGCTGTAAACATGATCAGGGCACGGAGCCTCAGTCACCTTCTTCCCATCTaGAGGTATAAATACATCCTT | + |
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Preference number: 5 (lower is better) Translates to: PDSGVRTAVNMIRARSLSHLLPI*RYKYIL Trigger: AAGGATGTATTTATACCTCAAGATGGGAAGAAGGTG...ACTGAGGCTCCGTGCCCTGATCATGTTTACAGCTGTTCTCACACCTGAATCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGATCTTCTTCCCAGAACTaGGGCAGTTTGGAGAAAATC | + |
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Preference number: 5 (lower is better) Translates to: IYYQCPRAATTLPDSGVRSSSQN*GSLEKI Trigger: GATTTTCTCCAAACTGCCCAAGTTCTGGGAAGAAGA...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS-3UTR CAA 90 bp | ATTTATTATCAGTGTCCCAGAGCTGCTACCACTCTGCCTGATTCAGGTGTGAGAAAGTTTTTCAGTGACTaGGACATCTTGCAGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: IYYQCPRAATTLPDSGVRKFFSD*DILQPA Trigger: AGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACTT...TCTCACACCTGAATCAGGCAGAGTGGTAGCAGCTCTGGGACACTGATAATAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CCA 90 bp | AAGTTCTTATTTAGCTCCACTTCTTCAGCTTCCCACTTTTCAAACTaGCCAGTGATGTCTACAGGGGCTCGGAGGATGTCTTTCACATTT | + |
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Preference number: 5 (lower is better) Translates to: KFLFSSTSSASHFSN*PVMSTGARRMSFTF Trigger: AAATGTGAAAGACATCCTCCGAGCCCCTGTAGACATCACTGGCCAGTTTGAAAAGTGGGAAGCTGAAGAAGTGGAGCTAAATAAGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 90 bp | TATTTAGCTCCACTTCTTCAGCTTCCCACTTTTCAAACTGGCCAGTaGTGTCTACAGGGGCTCGGAGGATGTCTTTCACATTTAAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: YLAPLLQLPTFQTGQ*CLQGLGGCLSHLRK Trigger: TTTTCTTAAATGTGAAAGACATCCTCCGAGCCCCTGTAGACATCACTGGCCAGTTTGAAAAGTGGGAAGCTGAAGAAGTGGAGCTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS GCA 72 bp | GAGGCTGCACTCGCCGGCCTTTACTTGCTTGAAGCCTaGAGGGCTCGTCTCTGCCTTGGGGGCCACCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: EAALAGLYLLEA*RARLCLGGHPG Trigger: TCCTGGGTGGCCCCCAAGGCAGAGACGAGCCCTGCAGGCTTCAAGCAAGTAAAGGCCGGCGAGTGCAGCCTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS GCA 72 bp | CCCAGGAGCGTGCCTGCCATAGCAGAACACTCTATGTaGCATCCGGGACGACCCTTTCCCCAGGGGCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PRSVPAIAEHSM*HPGRPFPQGQG Trigger: GCCTTGCCCCTGGGGAAAGGGTCGTCCCGGATGGCACATAGAGTGTTCTGCTATGGCAGGCACGCTCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CCA 72 bp | AGGAGCGCTTCTATGTGCCTGAACCACCGAGCCACGTaGAAGAGCCTTGAGTCAGCGGGAGGGGCCGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSASMCLNHRAT*KSLESAGGAES Trigger: GCTCTCGGCCCCTCCCGCTGACTCAAGGCTCTTCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS CAA 90 bp | TCGCCGGCCTTTACTTGCTTGAAGCCTGCAGGGCTCGTCTCTGCCTaGGGGGCCACCCAGGAGCGCTTCTATGTGCCTGAACCACCGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPAFTCLKPAGLVSA*GATQERFYVPEPPS Trigger: GCTCGGTGGTTCAGGCACATAGAAGCGCTCCTGGGTGGCCCCCAAGGCAGAGACGAGCCCTGCAGGCTTCAAGCAAGTAAAGGCCGGCGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS TCA 72 bp | GGGATAGGGAGTACCCCTGGATATAGCTACGCGTGCTaGGGTGTTGGTCCAGGGCCTGCACCCTGGCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GIGSTPGYSYAC*GVGPGPAPWLP Trigger: AGGCAGCCAGGGTGCAGGCCCTGGACCAACACCTCAGCACGCGTAGCTATATCCAGGGGTACTCCCTATCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS TCA 72 bp | AGAGCCTTGAGTCAGCGGGAGGGGCCGAGAGCTGCCTaGACACGTCCACATCTGCCTGGGATAGGGAGTACC | + |
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Preference number: 6 (lower is better) Translates to: RALSQREGPRAA*TRPHLPGIGST Trigger: GGTACTCCCTATCCCAGGCAGATGTGGACGTGTTCAGGCAGCTCTCGGCCCCTCCCGCTGACTCAAGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS TCA 72 bp | TGCCTTGGGGGCCACCCAGGAGCGCTTCTATGTGCCTaGACCACCGAGCCACGTGGAAGAGCCTTGAGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: CLGGHPGALLCA*TTEPRGRALSQ Trigger: CTGACTCAAGGCTCTTCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCTGGGTGGCCCCCAAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS GCA 72 bp | TCTCTGCCTTGGGGGCCACCCAGGAGCGCTTCTATGTaGCTGAACCACCGAGCCACGTGGAAGAGCCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: SLPWGPPRSASM*LNHRATWKSLE Trigger: CTCAAGGCTCTTCCACGTGGCTCGGTGGTTCAGGCACATAGAAGCGCTCCTGGGTGGCCCCCAAGGCAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS GCA 72 bp | GGCCTTTACTTGCTTGAAGCCTGCAGGGCTCGTCTCTaGCTTGGGGGCCACCCAGGAGCGCTTCTATGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLYLLEACRARL*LGGHPGALLCA Trigger: GGCACATAGAAGCGCTCCTGGGTGGCCCCCAAGGCAGAGACGAGCCCTGCAGGCTTCAAGCAAGTAAAGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS GCA 72 bp | AGCCCGGTTGGGCCTCCTCCGTTCAGCCTTCCTGGCTaGCATGTAGAGGTTGCACTGACTGACCAAAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: SPVGPPPFSLPG*HVEVALTDQSP Trigger: CGGGCTTTGGTCAGTCAGTGCAACCTCTACATGGCAGCCAGGAAGGCTGAACGGAGGAGGCCCAACCGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CAA 90 bp | GGACGACCCTTTCCCCAGGGGCAAGGCCAGGATGGCTCGCCTGGCTaGGAGGCCTTCCACAAGGCAAAGTCATTGGGAGAGCGTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GRPFPQGQGQDGSPG*EAFHKAKSLGERFS Trigger: TGAGAAACGCTCTCCCAATGACTTTGCCTTGTGGAAGGCCTCCAAGCCAGGCGAGCCATCCTGGCCTTGCCCCTGGGGAAAGGGTCGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 72 bp | TCATGGTGGGGGAAGCGGAGGTCAAACCCTCCACCATaGATGTCCATTGAGGCTCCCAGGAGCGTGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SWWGKRRSNPPP*MSIEAPRSVPA Trigger: GGCAGGCACGCTCCTGGGAGCCTCAATGGACATTCATGGTGGAGGGTTTGACCTCCGCTTCCCCCACCATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS GCA 72 bp | CGTGCTGAGGTGTTGGTCCAGGGCCTGCACCCTGGCTaGCTCGTCACTAATGCTCAGAATGGACCTGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: RAEVLVQGLHPG*LVTNAQNGPVV Trigger: GACTACAGGTCCATTCTGAGCATTAGTGACGAGGCAGCCAGGGTGCAGGCCCTGGACCAACACCTCAGCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000010899.14 |
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| CDS CAA 90 bp | CAGGATGGCTCGCCTGGCTTGGAGGCCTTCCACAAGGCAAAGTCATaGGGAGAGCGTTTCTCACTAAGGCGGTCAGCAGAGATGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: QDGSPGLEAFHKAKS*GERFSLRRSAEMLR Trigger: TCTGAGCATCTCTGCTGACCGCCTTAGTGAGAAACGCTCTCCCAATGACTTTGCCTTGTGGAAGGCCTCCAAGCCAGGCGAGCCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CCA 72 bp | CATGGCATCACGGACATCCTTCAGGAGCTGGGTGGCTaGGGGTTTCTGCTCCCGATACTGCTCAAACAGGTA | + |
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Preference number: 6 (lower is better) Translates to: HGITDILQELGG*GFLLPILLKQV Trigger: TACCTGTTTGAGCAGTATCGGGAGCAGAAACCCCCAGCCACCCAGCTCCTGAAGGATGTCCGTGATGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CCA 72 bp | GCTTCATGGCATCACGGACATCCTTCAGGAGCTGGGTaGCTGGGGGTTTCTGCTCCCGATACTGCTCAAACA | + |
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Preference number: 6 (lower is better) Translates to: ASWHHGHPSGAG*LGVSAPDTAQT Trigger: TGTTTGAGCAGTATCGGGAGCAGAAACCCCCAGCCACCCAGCTCCTGAAGGATGTCCGTGATGCCATGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CCA 72 bp | AATGGCTTCATGGCATCACGGACATCCTTCAGGAGCTaGGTGGCTGGGGGTTTCTGCTCCCGATACTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NGFMASRTSFRS*VAGGFCSRYCS Trigger: TGAGCAGTATCGGGAGCAGAAACCCCCAGCCACCCAGCTCCTGAAGGATGTCCGTGATGCCATGAAGCCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CAA 72 bp | TCGCCTGGCTTGGAGGCCTTCCACAAGGCAAAGTCATaGGGAGAGCGTTTCTCACTAAGGCGGTCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SPGLEAFHKAKS*GERFSLRRSAE Trigger: CTCTGCTGACCGCCTTAGTGAGAAACGCTCTCCCAATGACTTTGCCTTGTGGAAGGCCTCCAAGCCAGGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CCA 72 bp | AGAGGCTGGATCGCACAGCCTGTTCCAGTGGTTCTGTaGCAAGTTTCACAGAGTTCTGGATCCGCTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: RGWIAQPVPVVL*QVSQSSGSAPA Trigger: TGCTGGAGCGGATCCAGAACTCTGTGAAACTTGCCACAGAACCACTGGAACAGGCTGTGCGATCCAGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 72 bp | TGCTGGAATAGTCCAGTGTGTCTTTCCATGAGTGCATaGGGAATGCCAGTCGCAGCTGCCGTGCTGAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CWNSPVCLSMSA*GMPVAAAVLSA Trigger: AGCACTCAGCACGGCAGCTGCGACTGGCATTCCTCATGCACTCATGGAAAGACACACTGGACTATTCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CCA 72 bp | AGTGACTTGGACATCTTGCAGCCTGCTATCGTCAAGTaGCCCGTGTGCAAGAAGTACCTGACCCAGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SDLDILQPAIVK*PVCKKYLTQQS Trigger: TGACTGCTGGGTCAGGTACTTCTTGCACACGGGCCACTTGACGATAGCAGGCTGCAAGATGTCCAAGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 72 bp | CTGCTATCGTCAAGTGGCCCGTGTGCAAGAAGTACCTaGCCCAGCAGTCATTTTCAAAGTAGGCCTCCGACT | + |
|
Preference number: 6 (lower is better) Translates to: LLSSSGPCARST*PSSHFQSRPPT Trigger: AGTCGGAGGCCTACTTTGAAAATGACTGCTGGGTCAGGTACTTCTTGCACACGGGCCACTTGACGATAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 72 bp | CATAGTGTTGCTGGAATAGTCCAGTGTGTCTTTCCATaGGTGCATGAGGAATGCCAGTCGCAGCTGCCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: HSVAGIVQCVFP*VHEECQSQLPC Trigger: GCACGGCAGCTGCGACTGGCATTCCTCATGCACTCATGGAAAGACACACTGGACTATTCCAGCAACACTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 72 bp | GGCCCGCAACAGTACCACGTCACCTTCTTCCCATCTTaGGGTATAAATACATCCTTGTTCCGGGTGAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: GPQQYHVTFFPS*GINTSLFRVRL Trigger: TAGCCTCACCCGGAACAAGGATGTATTTATACCTCAAGATGGGAAGAAGGTGACGTGGTACTGTTGCGGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS GCA 72 bp | GACATCTTGCAGCCTGCTATCGTCAAGTGGCCCGTGTaGAAGAAGTACCTGACCCAGCAGTCATTTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: DILQPAIVKWPV*KKYLTQQSFSK Trigger: CTTTGAAAATGACTGCTGGGTCAGGTACTTCTTGCACACGGGCCACTTGACGATAGCAGGCTGCAAGATGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 72 bp | CCACTTCTTCAGCTTCCCACTTTTCAAACTGGCCAGTaGTGTCTACAGGGGCTCGGAGGATGTCTTTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: PLLQLPTFQTGQ*CLQGLGGCLSH Trigger: ATGTGAAAGACATCCTCCGAGCCCCTGTAGACATCACTGGCCAGTTTGAAAAGTGGGAAGCTGAAGAAGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS GCA 72 bp | CTGCTCCCGATACTGCTCAAACAGGTAGTTCTGCCGTaGCCGCCTGATGATCTTATCATCAATGTCTGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLPILLKQVVLP*PPDDLIINVCD Trigger: ATCACAGACATTGATGATAAGATCATCAGGCGGGCACGGCAGAACTACCTGTTTGAGCAGTATCGGGAGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CAA 90 bp | ATAGACAGTCGGCCCGCAACAGTACCACGTCACCTTCTTCCCATCTaGAGGTATAAATACATCCTTGTTCCGGGTGAGGCTATTATAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IDSRPATVPRHLLPI*RYKYILVPGEAIIE Trigger: CTCTATAATAGCCTCACCCGGAACAAGGATGTATTTATACCTCAAGATGGGAAGAAGGTGACGTGGTACTGTTGCGGGCCGACTGTCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CAA 90 bp | AAGGCATCTTTAATGGTGATAAAGTTTTTCAGTGACTTGGACATCTaGCAGCCTGCTATCGTCAAGTGGCCCGTGTGCAAGAAGTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: KASLMVIKFFSDLDI*QPAIVKWPVCKKYL Trigger: CAGGTACTTCTTGCACACGGGCCACTTGACGATAGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACTTTATCACCATTAAAGATGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CAA 90 bp | TGCTTCTTCAAGGCATCTTTAATGGTGATAAAGTTTTTCAGTGACTaGGACATCTTGCAGCCTGCTATCGTCAAGTGGCCCGTGTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CFFKASLMVIKFFSD*DILQPAIVKWPVCK Trigger: CTTGCACACGGGCCACTTGACGATAGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACTTTATCACCATTAAAGATGCCTTGAAGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CAA 72 bp | TTAATGGTGATAAAGTTTTTCAGTGACTTGGACATCTaGCAGCCTGCTATCGTCAAGTGGCCCGTGTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LMVIKFFSDLDI*QPAIVKWPVCK Trigger: CTTGCACACGGGCCACTTGACGATAGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACTTTATCACCATTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS CAA 72 bp | AAGGCATCTTTAATGGTGATAAAGTTTTTCAGTGACTaGGACATCTTGCAGCCTGCTATCGTCAAGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KASLMVIKFFSD*DILQPAIVKWP Trigger: GGGCCACTTGACGATAGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACTTTATCACCATTAAAGATGCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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| CDS TCA 72 bp | CTTCAAGGCATCTTTAATGGTGATAAAGTTTTTCAGTaGCTTGGACATCTTGCAGCCTGCTATCGTCAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LQGIFNGDKVFQ*LGHLAACYRQV Trigger: CACTTGACGATAGCAGGCTGCAAGATGTCCAAGTCACTGAAAAACTTTATCACCATTAAAGATGCCTTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000010899.14 ENSMUST00000105909.4 |
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