Pregenerated sensors for CARNS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000075289Ensembl transcript IDs: ENSMUST00000167055.2, ENSMUST00000237815.2
Found 223 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCAGCCCACAGCCCAGGCAGCAGCGAAAGGCTGCCTGCACCACCTaGGCCTCCTGCTCTGGTGCTAGCCCAGTGGGCATGCAGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SSPQPRQQRKAACTT*ASCSGASPVGMQAA Trigger: TGCAGCCTGCATGCCCACTGGGCTAGCACCAGAGCAGGAGGCCCAGGTGGTGCAGGCAGCCTTTCGCTGCTGCCTGGGCTGTGGGCTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR TCA 90 bp | TGCTCGGGGAACTCAGCAGCTGTAGGTGCTGGGACACCAGGCACATaGTGCCCACTAGGTAGCCACGGGCACGAGGGTGAGCAGGCAAGG | + |
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Preference number: 1 (lower is better) Translates to: CSGNSAAVGAGTPGT*CPLGSHGHEGEQAR Trigger: CCTTGCCTGCTCACCCTCGTGCCCGTGGCTACCTAGTGGGCATCATGTGCCTGGTGTCCCAGCACCTACAGCTGCTGAGTTCCCCGAGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR GCA 90 bp | GGGTGGTCAGCCTCACCCTGCAGGTCATGGAGGATCCGGGAAAAGTaGTCACGGCACTGGGGCCCATCCTTCACCAGCTGCACGCCTACT | + |
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Preference number: 1 (lower is better) Translates to: GWSASPCRSWRIREK*SRHWGPSFTSCTPT Trigger: AGTAGGCGTGCAGCTGGTGAAGGATGGGCCCCAGTGCCGTGAGCACTTTTCCCGGATCCTCCATGACCTGCAGGGTGAGGCTGACCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | CAACAGGCCACAGCATGGAGAGAGGTCGAAGGCCAGGGTGGGCCCTaGCACCGCAACAGATGTAGCTGTGTGCGGCTCTTCTGCTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: QQATAWREVEGQGGP*HRNRCSCVRLFCFA Trigger: GGCAAAGCAGAAGAGCCGCACACAGCTACATCTGTTGCGGTGCCAGGGCCCACCCTGGCCTTCGACCTCTCTCCATGCTGTGGCCTGTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | TCACCCTGCAGGTCATGGAGGATCCGGGAAAAGTGCTCACGGCACTaGGGCCCATCCTTCACCAGCTGCACGCCTACTGCTCCTGACCCA | + |
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Preference number: 1 (lower is better) Translates to: SPCRSWRIREKCSRH*GPSFTSCTPTAPDP Trigger: TGGGTCAGGAGCAGTAGGCGTGCAGCTGGTGAAGGATGGGCCCCAGTGCCGTGAGCACTTTTCCCGGATCCTCCATGACCTGCAGGGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | TCCATCAGCAGCATAGCATTGCCCCAGCCCAGCCCGATGCCAGGGTaGTCAGCCTCACCCTGCAGGTCATGGAGGATCCGGGAAAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: SISSIALPQPSPMPG*SASPCRSWRIREKC Trigger: GCACTTTTCCCGGATCCTCCATGACCTGCAGGGTGAGGCTGACCACCCTGGCATCGGGCTGGGCTGGGGCAATGCTATGCTGCTGATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR TCA 90 bp | CCTGCTCTGGTGCTAGCCCAGTGGGCATGCAGGCTGCAGTCTCTGTaGAGCCAGGCAGCCTTGTGGGGCCATTATCGGAGACGAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: PALVLAQWACRLQSL*SQAALWGHYRRRKQ Trigger: CTGCTTTCGTCTCCGATAATGGCCCCACAAGGCTGCCTGGCTTCACAGAGACTGCAGCCTGCATGCCCACTGGGCTAGCACCAGAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | CTCTCCACATCAGCCTCATTCTCCAATGGGCAACAGGCCACAGCATaGAGAGAGGTCGAAGGCCAGGGTGGGCCCTGGCACCGCAACAGA | + |
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Preference number: 1 (lower is better) Translates to: LSTSASFSNGQQATA*REVEGQGGPWHRNR Trigger: TCTGTTGCGGTGCCAGGGCCCACCCTGGCCTTCGACCTCTCTCCATGCTGTGGCCTGTTGCCCATTGGAGAATGAGGCTGATGTGGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR TCA 90 bp | ACGGCACTGGGGCCCATCCTTCACCAGCTGCACGCCTACTGCTCCTaGCCCAAATTCCAGTTTCATCACACCTGGCAGGGGTACCTGGTA | + |
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Preference number: 1 (lower is better) Translates to: TALGPILHQLHAYCS*PKFQFHHTWQGYLV Trigger: TACCAGGTACCCCTGCCAGGTGTGATGAAACTGGAATTTGGGTCAGGAGCAGTAGGCGTGCAGCTGGTGAAGGATGGGCCCCAGTGCCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR TCA 90 bp | AGGGCTCCTCATACTGGCCAGGTATCAGGGCCTCCTCCAGCAGGTTaGGTCGTAATTGCCCCTGGTCATGGAGGGTTTGCAGAGTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: RAPHTGQVSGPPPAG*VVIAPGHGGFAESL Trigger: GAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGATACCTGGCCAGTATGAGGAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR GCA 90 bp | GTCGTAATTGCCCCTGGTCATGGAGGGTTTGCAGAGTCTCTCTACTaGTCGGGGAACTCAGCAGCTGTAGGTGCTGGGACACCAGGCACA | + |
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Preference number: 1 (lower is better) Translates to: VVIAPGHGGFAESLY*SGNSAAVGAGTPGT Trigger: TGTGCCTGGTGTCCCAGCACCTACAGCTGCTGAGTTCCCCGAGCAGTAGAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR GCA 90 bp | TACTGGCCAGGTATCAGGGCCTCCTCCAGCAGGTTGAGTCGTAATTaGCCCTGGTCATGGAGGGTTTGCAGAGTCTCTCTACTGCTCGGG | + |
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Preference number: 1 (lower is better) Translates to: YWPGIRASSSRLSRN*PWSWRVCRVSLLLG Trigger: CCCGAGCAGTAGAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGATACCTGGCCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | ATCAGGGCCTCCTCCAGCAGGTTGAGTCGTAATTGCCCCTGGTCATaGAGGGTTTGCAGAGTCTCTCTACTGCTCGGGGAACTCAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: IRASSSRLSRNCPWS*RVCRVSLLLGELSS Trigger: GCTGCTGAGTTCCCCGAGCAGTAGAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | CCAGGTATCAGGGCCTCCTCCAGCAGGTTGAGTCGTAATTGCCCCTaGTCATGGAGGGTTTGCAGAGTCTCTCTACTGCTCGGGGAACTC | + |
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Preference number: 1 (lower is better) Translates to: PGIRASSSRLSRNCP*SWRVCRVSLLLGEL Trigger: GAGTTCCCCGAGCAGTAGAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGATACCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR GCA 90 bp | AAAGCAGCCAGCAACCGTCCACCGAACACCACCAGGTCCACGTCATaGTCTGTGCCCTCAACAAACTCCATCAGCAGCATAGCATTGCCC | + |
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Preference number: 1 (lower is better) Translates to: KAASNRPPNTTRSTS*SVPSTNSISSIALP Trigger: GGGCAATGCTATGCTGCTGATGGAGTTTGTTGAGGGCACAGAGCATGACGTGGACCTGGTGGTGTTCGGTGGACGGTTGCTGGCTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR GCA 90 bp | TCCTCCAGCAGGTTGAGTCGTAATTGCCCCTGGTCATGGAGGGTTTaGAGAGTCTCTCTACTGCTCGGGGAACTCAGCAGCTGTAGGTGC | + |
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Preference number: 1 (lower is better) Translates to: SSSRLSRNCPWSWRV*RVSLLLGELSSCRC Trigger: GCACCTACAGCTGCTGAGTTCCCCGAGCAGTAGAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | TGTTCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTaGGGCAAAGTGACAGAGAGAGGGACAGGGAAATATAGCCCCACG | + |
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Preference number: 1 (lower is better) Translates to: CSGIGLSCGSMLTLG*GKVTERGTGKYSPT Trigger: CGTGGGGCTATATTTCCCTGTCCCTCTCTCTGTCACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | ACCCAAATTCCAGTTTCATCACACCTGGCAGGGGTACCTGGTAAATaGCTCTCTCCACATCAGCCTCATTCTCCAATGGGCAACAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: TQIPVSSHLAGVPGK*LSPHQPHSPMGNRP Trigger: TGGCCTGTTGCCCATTGGAGAATGAGGCTGATGTGGAGAGAGCCATTTACCAGGTACCCCTGCCAGGTGTGATGAAACTGGAATTTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 90 bp | TTCTGGAAGGCAAGAGGACCCAGCAAATTCCAGATACTTGTTTTATaGTCCTTGAATCCAGAAGACTTTGGTGTCACAATGGCTCTACTG | + |
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Preference number: 1 (lower is better) Translates to: FWKARGPSKFQILVL*SLNPEDFGVTMALL Trigger: CAGTAGAGCCATTGTGACACCAAAGTCTTCTGGATTCAAGGACCATAAAACAAGTATCTGGAATTTGCTGGGTCCTCTTGCCTTCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCCAGCAACCGTCCACCGAACACCACCAGGTCCACGTCATGCTCTGTGCCCCCCAGCCCAGCCCGATaGCAGGGTGGTCAGCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: AASNRPPNTTRSTSCSVPPSPAR*QGGQPH Trigger: GTGAGGCTGACCACCCTGGCATCGGGCTGGGCTGGG...GGGCACAGAGCATGACGTGGACCTGGTGGTGTTCGGTGGACGGTTGCTGGCTGC 67% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGCATTGCCCCAGCCCAGCCCGATGCCAGGGTGGTCAGCCTCACCCTGCAGAAGAGAGGAGGAGCCTaGGTTTCACCCACCCCCATC | + |
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Preference number: 2 (lower is better) Translates to: HSIAPAQPDARVVSLTLQKRGGA*VSPTPI Trigger: GATGGGGGTGGGTGAAACCCAGGCTCCTCCTCTCTT...CTGCAGGGTGAGGCTGACCACCCTGGCATCGGGCTGGGCTGGGGCAATGCTATG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | GACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCCCCAAGTGGGCATGCAGGCTaGAGTCTCTGTGAAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: DLGGGGVREEEPGFHPPPSGHAG*SLCEAR Trigger: CCTGGCTTCACAGAGACTGCAGCCTGCATGCCCACT...TGGGGGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCGCACTGCATCCCTGCTaGTCCTTGACCCCAGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: AGPRRWRGKRGGAWVSPTALHPC*SLTPVL Trigger: TAGCACTGGGGTCAAGGAGCAGCAGGGATGCAGTGC...GGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCAAGAGAGGAGGAGCCTaGGTTTCACCCACCCCCATC | + |
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Preference number: 2 (lower is better) Translates to: AGPRRWRGKRGGAWVSPTKRGGA*VSPTPI Trigger: GATGGGGGTGGGTGAAACCCAGGCTCCTCCTCTCTT...GGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCCTGGTGCTAGCCCAGTaGGCATGCAGGCTGCAGTCT | + |
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Preference number: 2 (lower is better) Translates to: RAGPRRWRGKRGGAWVSPLVLAQ*ACRLQS Trigger: AGACTGCAGCCTGCATGCCCACTGGGCTAGCACCAG...GGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CAA 90 bp | ACGTCATGCTCTGTGCCCTCAACAAACTCCATCAGCAGCATAGCATaGCCCCAGCCCAGCCCGATGCCAGGGTGGTCAGCCTCACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: TSCSVPSTNSISSIA*PQPSPMPGWSASPC Trigger: GCAGGGTGAGGCTGACCACCCTGGCATCGGGCTGGGCTGGGGCAATGCTATGCTGCTGATGGAGTTTGTTGAGGGCACAGAGCATGACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | GGAGACGAAAGCAGCCAGCAACCGTCCACCGAACACCACCAGGTCCACGTCATGTGGTCAGCCTCACCCTaGAGGTCATGGAGGATCCGG | + |
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Preference number: 2 (lower is better) Translates to: GDESSQQPSTEHHQVHVMWSASP*RSWRIR Trigger: CCGGATCCTCCATGACCTGCAGGGTGAGGCTGACCA...CATGACGTGGACCTGGTGGTGTTCGGTGGACGGTTGCTGGCTGCTTTCGTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTGGGGCAAAGTGGGTCGAAGGCCAGGGTaGGCCCTGGCACCGCAACAG | + |
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Preference number: 2 (lower is better) Translates to: SGIGLSCGSMLTLGWGKVGRRPG*ALAPQQ Trigger: CTGTTGCGGTGCCAGGGCCCACCCTGGCCTTCGACC...CACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCCTCTCCTTGTGTAGGTaGCAGGAAGAGCTGGACCTA | + |
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Preference number: 2 (lower is better) Translates to: AGPRRWRGKRGGAWVSPTLSLCR*QEELDL Trigger: TAGGTCCAGCTCTTCCTGTCACCTACACAAGGAGAG...GGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGATGCCAGGGTGGTCAGCCTCACCCTGCAGGTCATGGAGGATCCGGGAAAAACAGATGTAGCTGTGTaGGGCTCTTCTGCTTTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PDARVVSLTLQVMEDPGKTDVAV*GSSALP Trigger: TGGCAAAGCAGAAGAGCCGCACACAGCTACATCTGT...TTTTCCCGGATCCTCCATGACCTGCAGGGTGAGGCTGACCACCCTGGCATCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCGGTAGAGATCGTGTGTaGTGTATGGGAGGCAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: ESWGYLGLDGGFLEGKRTGRDRV*CMGGRC Trigger: ACACCTGCCTCCCATACACCACACACGATCTCTACC...GGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR TCA 90 bp | GACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCCCCAGACCTGGAGGCTAACTaGGCGTTTAAAACAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: DLGGGGVREEEPGFHPPPDLEAN*AFKTVN Trigger: GTTTACTGTTTTAAACGCTCAGTTAGCCTCCAGGTC...TGGGGGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCGAGGGTTAATCTCGATGAGCCTTGGCCCAGCCCCAGTCATCTTGAGCTCCGCGGCTCTTCTGCTTTaGCAAGCACATGGCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: IRGLISMSLGPAPVILSSAALLL*QAHGSW Trigger: CCAGCTGCCATGTGCTTGGCAAAGCAGAAGAGCCGC...GGAGCTCAAGATGACTGGGGCTGGGCCAAGGCTCATCGAGATTAACCCTCGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCACAGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCAGGATCCGGGAAAAGTaGTCACGGCACTGGGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: EHRHLLLLLRPTDTVKHGRIREK*SRHWGP Trigger: TGGGCCCCAGTGCCGTGAGCACTTTTCCCGGATCCT...GCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAGGTCCACGTCATGCTCTGTGCCCTCAACAAACTCCATCAGCAGCATAGCCTCTCCTTGTGTAGGTaGCAGGAAGAGCTGGACCTA | + |
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Preference number: 2 (lower is better) Translates to: HQVHVMLCALNKLHQQHSLSLCR*QEELDL Trigger: TAGGTCCAGCTCTTCCTGTCACCTACACAAGGAGAG...GCTATGCTGCTGATGGAGTTTGTTGAGGGCACAGAGCATGACGTGGACCTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCGAGGGTTAATCTCGATGAGCCTTGGCCCAGCCCCAGTCATCTTGAGCTCCAAGGCTAGGGGCTGGTaGAGGTTCTCTCCTTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: IRGLISMSLGPAPVILSSKARGW*RFSPCV Trigger: TACACAAGGAGAGAACCTTCACCAGCCCCTAGCCTT...GGAGCTCAAGATGACTGGGGCTGGGCCAAGGCTCATCGAGATTAACCCTCGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCGAATCCAGAAGACTTTaGTGTCACAATGGCTCTACT | + |
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Preference number: 2 (lower is better) Translates to: RAGPRRWRGKRGGAWVSPESRRL*CHNGST Trigger: AGTAGAGCCATTGTGACACCAAAGTCTTCTGGATTC...GGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTATCAGGGCCTCCTCCAGCAGGTTGAGTCGTAATTGCCCCTGGTCATGGAAAGGAGAGAGGACCTaGAGGCTAACTGAGCGTTTA | + |
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Preference number: 2 (lower is better) Translates to: PGIRASSSRLSRNCPWSWKGERT*RLTERL Trigger: TAAACGCTCAGTTAGCCTCCAGGTCCTCTCTCCTTT...CCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGATACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTATCAGGGCCTCCTCCAGCAGGTTGAGTCGTAATTGCCCCTGGTCATGGGTCTGCCTGAAAGCATaGAGGGAAATGTTTACTCCT | + |
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Preference number: 2 (lower is better) Translates to: PGIRASSSRLSRNCPWSWVCLKA*REMFTP Trigger: AGGAGTAAACATTTCCCTTCATGCTTTCAGGCAGAC...CCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGATACCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCCAGCAACCGTCCACCGAACACCACCAGGTCCACGTCATGCTCTGTGCCCCAGATACTTGTTTTATaGTCCTTGAATCCAGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: AASNRPPNTTRSTSCSVPQILVL*SLNPED Trigger: GTCTTCTGGATTCAAGGACCATAAAACAAGTATCTG...GGGCACAGAGCATGACGTGGACCTGGTGGTGTTCGGTGGACGGTTGCTGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGTTTCAGGAGCTGTCCTCGGCTCCTGAGCAAAGACAGGTGTTTTCAGAGTGTACCTGGGGCTAGATaGAGGCTTTCTGGAAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: AGFRSCPRLLSKDRCFQSVPGAR*RLSGRQ Trigger: TTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTAC...ACTCTGAAAACACCTGTCTTTGCTCAGGAGCCGAGGACAGCTCCTGAAACCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAGGAAAGGTGTACACAGAAGTCCCAGGGCCAAGCTAGCTAGGAATGCCAGATCACCCTGCAGGTCATaGAGGATCCGGGAAAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: MRKGVHRSPRAKLARNARSPCRS*RIREKC Trigger: GCACTTTTCCCGGATCCTCCATGACCTGCAGGGTGA...TCTGGCATTCCTAGCTAGCTTGGCCCTGGGACTTCTGTGTACACCTTTCCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGGTTTCAGGAGCTGTCCTCGGCTCCTGAGCAAAGACAGGTGTTTTCAGAGTGCACTAGGGTCTGCCTaGAAGCATGAAGGGAAATGT | + |
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Preference number: 2 (lower is better) Translates to: AGFRSCPRLLSKDRCFQSALGSA*KHEGKC Trigger: ACATTTCCCTTCATGCTTTCAGGCAGACCCTAGTGC...ACTCTGAAAACACCTGTCTTTGCTCAGGAGCCGAGGACAGCTCCTGAAACCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | AATCCAGAAGACTTTGGTGTCACAATGGCTCTACTGTTCTGGAATAGGCCTGAGCCAAGCCCTGACAGATaGCTAGCAGGCGGTGACAGG | + |
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Preference number: 2 (lower is better) Translates to: NPEDFGVTMALLFWNRPEPSPDR*LAGGDR Trigger: CCTGTCACCGCCTGCTAGGCATCTGTCAGGGCTTGG...CTCAGGCCTATTCCAGAACAGTAGAGCCATTGTGACACCAAAGTCTTCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTGGGGCAAAGTGGTCTGCCTGAAAGCATaGAGGGAAATGTTTACTCCT | + |
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Preference number: 2 (lower is better) Translates to: SGIGLSCGSMLTLGWGKVVCLKA*REMFTP Trigger: AGGAGTAAACATTTCCCTTCATGCTTTCAGGCAGAC...CACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTGTTTTATGGTCCTTGAATCCAGAAGACTTTGGTGTCACAATGGCTCTACTACCACCTGGGCCTCCTaGTCTGGTGCTAGCCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: TCFMVLESRRLWCHNGSTTTWAS*SGASPV Trigger: CACTGGGCTAGCACCAGAGCAGGAGGCCCAGGTGGT...AGTAGAGCCATTGTGACACCAAAGTCTTCTGGATTCAAGGACCATAAAACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTAGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTGACCTGGAGGCTAACTaGGCGTTTAAAACAGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ARNARGQSNKAGRDRVWCDLEAN*AFKTVN Trigger: GTTTACTGTTTTAAACGCTCAGTTAGCCTCCAGGTC...ACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
||
| 3UTR-3UTR CCA 90 bp | GCACAGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCCAGAATCCAGAAGACTTTaGTGTCACAATGGCTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: AQTFASTAQANRHSEARPESRRL*CHNGST Trigger: AGTAGAGCCATTGTGACACCAAAGTCTTCTGGATTC...TGGCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTAGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTGTAAACAGAGAAGGTTaGCCTTGGCATTCTGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: ARNARGQSNKAGRDRVWCVNREG*PWHSVY Trigger: GTAGACAGAATGCCAAGGCCAACCTTCTCTGTTTAC...ACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | GCACAGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCCACAGATACTTGTTTTATaGTCCTTGAATCCAGAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: AQTFASTAQANRHSEARPQILVL*SLNPED Trigger: GTCTTCTGGATTCAAGGACCATAAAACAAGTATCTG...TGGCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGTTTTGCATAAAGGCTAGTGTGCTAATCTCCCATTTCATGGCCTTTGTCCAGTTTCATCACACCTaGCAGGGGTACCTGGTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PGFCIKASVLISHFMAFVQFHHT*QGYLVN Trigger: ATTTACCAGGTACCCCTGCCAGGTGTGATGAAACTG...GACAAAGGCCATGAAATGGGAGATTAGCACACTAGCCTTTATGCAAAACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGGTTTTGCATAAAGGCTAGTGTGCTAATCTCCCATTTCATGGCCTTTGTCGCACTGATGTGCCAGTaGAGAAGCTGCTATTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: PGFCIKASVLISHFMAFVALMCQ*RSCYLL Trigger: TAACAAATAGCAGCTTCTTCACTGGCACATCAGTGC...GACAAAGGCCATGAAATGGGAGATTAGCACACTAGCCTTTATGCAAAACCCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTTTGCACTGATGTGCCAGTaGAGAAGCTGCTATTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: WPWHSVYIHYNRNLEAVFALMCQ*RSCYLL Trigger: TAACAAATAGCAGCTTCTTCACTGGCACATCAGTGC...AAAGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
||
| 3UTR GCA 72 bp | CAGCCCAGCCCGATGCCAGGGTGGTCAGCCTCACCCTaGAGGTCATGGAGGATCCGGGAAAAGTGCTCACGG | + |
|
Preference number: 3 (lower is better) Translates to: QPSPMPGWSASP*RSWRIREKCSR Trigger: CCGTGAGCACTTTTCCCGGATCCTCCATGACCTGCAGGGTGAGGCTGACCACCCTGGCATCGGGCTGGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR CCA 72 bp | TGTGCGGCTCTTCTGCTTTGCCAAGCACATGGCAGCTaGGGGGCTGCAGGGCAGACCCAGCTCACGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: CAALLLCQAHGS*GAAGQTQLTAE Trigger: CTCTGCCGTGAGCTGGGTCTGCCCTGCAGCCCCCCAGCTGCCATGTGCTTGGCAAAGCAGAAGAGCCGCACA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR GCA 72 bp | GCCTCACCCTGCAGGTCATGGAGGATCCGGGAAAAGTaGTCACGGCACTGGGGCCCATCCTTCACCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASPCRSWRIREK*SRHWGPSFTSC Trigger: GCAGCTGGTGAAGGATGGGCCCCAGTGCCGTGAGCACTTTTCCCGGATCCTCCATGACCTGCAGGGTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR GCA 72 bp | AGGCCTCAGCAGGGCTGGGCCCAGCACAGGCCACATTaGAGTAGGGCTCCTCATACTGGCCAGGTATCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: RPQQGWAQHRPH*SRAPHTGQVSG Trigger: CCCTGATACCTGGCCAGTATGAGGAGCCCTACTGCAATGTGGCCTGTGCTGGGCCCAGCCCTGCTGAGGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR-3UTR CAA 90 bp | GACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCCCCACATGCTGACCCTGGGTaGGGGCAAAGTGACAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DLGGGGVREEEPGFHPPPHADPG*GQSDRE Trigger: CTCTCTGTCACTTTGCCCCAACCCAGGGTCAGCATG...TGGGGGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
||
| 3UTR CCA 72 bp | ACAGCATGGAGAGAGGTCGAAGGCCAGGGTGGGCCCTaGCACCGCAACAGATGTAGCTGTGTGCGGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TAWREVEGQGGP*HRNRCSCVRLF Trigger: GAAGAGCCGCACACAGCTACATCTGTTGCGGTGCCAGGGCCCACCCTGGCCTTCGACCTCTCTCCATGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR CCA 72 bp | TCAGCCTCATTCTCCAATGGGCAACAGGCCACAGCATaGAGAGAGGTCGAAGGCCAGGGTGGGCCCTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SASFSNGQQATA*REVEGQGGPWH Trigger: GTGCCAGGGCCCACCCTGGCCTTCGACCTCTCTCCATGCTGTGGCCTGTTGCCCATTGGAGAATGAGGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACGAAAGCAGCCAGCAACCGTCCACCGAACACCACCAGGTCCACGTCATGATCAGCAGCATAGCATaGCCCCAGCCCAGCCCGATG | + |
|
Preference number: 3 (lower is better) Translates to: GDESSQQPSTEHHQVHVMISSIA*PQPSPM Trigger: CATCGGGCTGGGCTGGGGCAATGCTATGCTGCTGAT...CATGACGTGGACCTGGTGGTGTTCGGTGGACGGTTGCTGGCTGCTTTCGTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR CCA 72 bp | AGGTCATGGAGGATCCGGGAAAAGTGCTCACGGCACTaGGGCCCATCCTTCACCAGCTGCACGCCTACTGCT | + |
|
Preference number: 3 (lower is better) Translates to: RSWRIREKCSRH*GPSFTSCTPTA Trigger: AGCAGTAGGCGTGCAGCTGGTGAAGGATGGGCCCCAGTGCCGTGAGCACTTTTCCCGGATCCTCCATGACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR TCA 72 bp | GGGCCCATCCTTCACCAGCTGCACGCCTACTGCTCCTaGCCCAAATTCCAGTTTCATCACACCTGGCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GPILHQLHAYCS*PKFQFHHTWQG Trigger: CCCCTGCCAGGTGTGATGAAACTGGAATTTGGGTCAGGAGCAGTAGGCGTGCAGCTGGTGAAGGATGGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR GCA 72 bp | GCCCCTGGTCATGGAGGGTTTGCAGAGTCTCTCTACTaGTCGGGGAACTCAGCAGCTGTAGGTGCTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: APGHGGFAESLY*SGNSAAVGAGT Trigger: TGTCCCAGCACCTACAGCTGCTGAGTTCCCCGAGCAGTAGAGAGACTCTGCAAACCCTCCATGACCAGGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR GCA 72 bp | AAGTGCTCACGGCACTGGGGCCCATCCTTCACCAGCTaGACGCCTACTGCTCCTGACCCAAATTCCAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KCSRHWGPSFTS*TPTAPDPNSSF Trigger: GAAACTGGAATTTGGGTCAGGAGCAGTAGGCGTGCAGCTGGTGAAGGATGGGCCCCAGTGCCGTGAGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR TCA 72 bp | CATACTGGCCAGGTATCAGGGCCTCCTCCAGCAGGTTaGGTCGTAATTGCCCCTGGTCATGGAGGGTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: HTGQVSGPPPAG*VVIAPGHGGFA Trigger: TGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGATACCTGGCCAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR CCA 72 bp | AGGGCCTCCTCCAGCAGGTTGAGTCGTAATTGCCCCTaGTCATGGAGGGTTTGCAGAGTCTCTCTACTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: RASSSRLSRNCP*SWRVCRVSLLL Trigger: GAGCAGTAGAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGTTTCAGGAGCTGTCCTCGGCTCCTGAGCAAAGACAGGTGTTTTCAGAGTCATGCTGACCCTGGGTaGGGGCAAAGTGACAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGFRSCPRLLSKDRCFQSHADPG*GQSDRE Trigger: CTCTCTGTCACTTTGCCCCAACCCAGGGTCAGCATG...ACTCTGAAAACACCTGTCTTTGCTCAGGAGCCGAGGACAGCTCCTGAAACCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
||
| 3UTR GCA 72 bp | AGCAACCGTCCACCGAACACCACCAGGTCCACGTCATaGTCTGTGCCCTCAACAAACTCCATCAGCAGCATA | + |
|
Preference number: 3 (lower is better) Translates to: SNRPPNTTRSTS*SVPSTNSISSI Trigger: TATGCTGCTGATGGAGTTTGTTGAGGGCACAGAGCATGACGTGGACCTGGTGGTGTTCGGTGGACGGTTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| 3UTR GCA 72 bp | GGTATCAGGGCCTCCTCCAGCAGGTTGAGTCGTAATTaGCCCTGGTCATGGAGGGTTTGCAGAGTCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: GIRASSSRLSRN*PWSWRVCRVSL Trigger: TAGAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGATACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 72 bp | TCCTCCAGCAGGTTGAGTCGTAATTGCCCCTGGTCATaGAGGGTTTGCAGAGTCTCTCTACTGCTCGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSRLSRNCPWS*RVCRVSLLLGE Trigger: TTCCCCGAGCAGTAGAGAGACTCTGCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGGAAAGGTGTACACAGAAGTCCCAGGGCCAAGCTAGCTAGGAATGCCAGACCCATTTCATGGCCTTaGTCCAAGGCTAGGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MRKGVHRSPRAKLARNARPISWP*SKARGW Trigger: CCAGCCCCTAGCCTTGGACAAAGGCCATGAAATGGG...TCTGGCATTCCTAGCTAGCTTGGCCCTGGGACTTCTGTGTACACCTTTCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR CAA 90 bp | AGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCCAGACATGCGGCTCTTCTGCTTaGCCAAGCACATGGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RHLLLLLRPTDTVKHGQTCGSSA*PSTWQL Trigger: CAGCTGCCATGTGCTTGGCAAAGCAGAAGAGCCGCA...TGTCTGGCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR CCA 72 bp | GAAGCCTCCCATTCGAGGGTTAATCTCGATGAGCCTTaGCCCAGCCCCAGTCATCTTGAGCTCCACATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: EASHSRVNLDEP*PSPSHLELHIE Trigger: TTCAATGTGGAGCTCAAGATGACTGGGGCTGGGCCAAGGCTCATCGAGATTAACCCTCGAATGGGAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| 3UTR TCA 72 bp | TTAGGTAGGCAGGTTTCAGGAGCTGTCCTCGGCTCCTaGGCAAAGACAGGTGTTTTCAGAGTAGCTAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGRQVSGAVLGS*AKTGVFRVASS Trigger: GGAGCTAGCTACTCTGAAAACACCTGTCTTTGCTCAGGAGCCGAGGACAGCTCCTGAAACCTGCCTACCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR CCA 72 bp | ATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTaGGGCAAAGTGACAGAGAGAGGGACAGGGAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: IGLSCGSMLTLG*GKVTERGTGKY Trigger: ATATTTCCCTGTCCCTCTCTCTGTCACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGGTTTCAGGAGCTGTCCTCGGCTCCTGAGCAAAGACAGGTGTTTTCAGAGTAGTAAACAGAGAAGGTaGGCCTTGGCATTCTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: AGFRSCPRLLSKDRCFQSSKQRR*ALAFCL Trigger: TAGACAGAATGCCAAGGCCAACCTTCTCTGTTTACT...ACTCTGAAAACACCTGTCTTTGCTCAGGAGCCGAGGACAGCTCCTGAAACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR TCA 72 bp | GACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTaGAGCACGGCCAGACATTTTCAGCAGGCTCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: DICFYCSGQQTQ*STARHFQQALQ Trigger: TTGTAGAGCCTGCTGAAAATGTCTGGCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTGGGGCAAAGTGCTTGTTTTATGGTCCTaGAATCCAGAAGACTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SGIGLSCGSMLTLGWGKVLVLWS*NPEDFG Trigger: ACCAAAGTCTTCTGGATTCAAGGACCATAAAACAAG...CACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR TCA 72 bp | TTCCTCATCTGTAACATAGGGGCACTAGGGTCTGCCTaGAAGCATGAAGGGAAATGTTTACTCCTAGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FLICNIGALGSA*KHEGKCLLLVL Trigger: CAGCACTAGGAGTAAACATTTCCCTTCATGCTTTCAGGCAGACCCTAGTGCCCCTATGTTACAGATGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR TCA 72 bp | CGTGTGTGGTGTATGGGAGGCAGGTGTTTAGGAGTCTaGGTGCTGCCTATAAATGAAGATAGAAAGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RVWCMGGRCLGV*VLPINEDRKER Trigger: TCTCTCCTTTCTATCTTCATTTATAGGCAGCACTCAGACTCCTAAACACCTGCCTCCCATACACCACACACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR TCA 72 bp | GACCCAGCAAATTCCAGATACTTGTTTTATGGTCCTTaGATCCAGAAGACTTTGGTGTCACAATGGCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: DPANSRYLFYGP*IQKTLVSQWLY Trigger: GTAGAGCCATTGTGACACCAAAGTCTTCTGGATTCAAGGACCATAAAACAAGTATCTGGAATTTGCTGGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| CDS-3UTR CCA 90 bp | GCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCGGTCGAAGGCCAGGGTaGGCCCTGGCACCGCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AGPRRWRGKRGGAWVSPTGRRPG*ALAPQQ Trigger: CTGTTGCGGTGCCAGGGCCCACCCTGGCCTTCGACC...GGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR GCA 90 bp | GCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCATTCCGAGCCAGCTCTaGTGCCTCCTTGCCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AGPRRWRGKRGGAWVSPTIPSQL*CLLATA Trigger: GGCCGTGGCAAGGAGGCAGCAGAGCTGGCTCGGAAT...GGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCAGGGAAGCAGCCTGTaGGTGGCAGGCCAGCACCGC | + |
|
Preference number: 4 (lower is better) Translates to: GVLGVPGARWRLSGRQEDQGSSL*VAGQHR Trigger: GCGGTGCTGGCCTGCCACCCACAGGCTGCTTCCCTG...GTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCCTGGTGCTAGCCCAGTaGGCATGCAGGCTGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGPRRWRGKRGGAWVSPTLVLAQ*ACRLQS Trigger: AGACTGCAGCCTGCATGCCCACTGGGCTAGCACCAG...GGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCGCTGCCTGCACCACCTaGGCCTCCTGCTCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ESWGYLGLDGGFLEGKRTAACTT*ASCSGA Trigger: AGCACCAGAGCAGGAGGCCCAGGTGGTGCAGGCAGC...GGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACACACGAACTTCTTGCTaGCGCCGCCGGCGCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GVLGVPGARWRLSGRQEDTRTSC*RRRRRS Trigger: TGATCGGCGCCGGCGGCGTCAGCAAGAAGTTCGTGT...GTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR TCA 90 bp | GGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCTGGGACAGCTCCGATaGGGTTCCTGTGGGGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVLGVPGARWRLSGRQEDLGQLR*GSCGAS Trigger: ACTTGCCCCACAGGAACCTCATCGGAGCTGTCCCAG...GTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCCCCATGGGAGAACCCAGAATaGACAAGGTCACCTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLGGGGVREEEPGFHPPPWENPE*TRSPLP Trigger: GGGCAGAGGTGACCTTGTGCATTCTGGGTTCTCCCA...TGGGGGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGCTGGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGGCAGCAGCGAAAGGCTaGCTGCACCACCTGGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKAGVLGVPGARWRLSGRAAAKG*LHHLGL Trigger: GAGGCCCAGGTGGTGCAGGCAGCCTTTCGCTGCTGC...CCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCCAGCCTTTAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| 3UTR CAA 72 bp | TCTGTGCCCTCAACAAACTCCATCAGCAGCATAGCATaGCCCCAGCCCAGCCCGATGCCAGGGTGGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPSTNSISSIA*PQPSPMPGWSA Trigger: GGCTGACCACCCTGGCATCGGGCTGGGCTGGGGCAATGCTATGCTGCTGATGGAGTTTGTTGAGGGCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCTACGAGGTGCCTGGCTaGGATCCTGGGTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESWGYLGLDGGFLEGKRTYEVPG*DPGSQE Trigger: TTCCTGAGACCCAGGATCGCAGCCAGGCACCTCGTA...GGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCCCCAAATCCGACACACCACTaGACAGATACGCACAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLGGGGVREEEPGFHPPPNPTHH*TDTHSQ Trigger: CTGGCTGTGCGTATCTGTGCAGTGGTGTGTCGGATT...TGGGGGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCCCCAGCCCAGCCCGATaGCAGGGTGGTCAGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: EHRHLLLLLRPTDTVKHGPSPAR*QGGQPH Trigger: GTGAGGCTGACCACCCTGGCATCGGGCTGGGCTGGG...GCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCCTCACCCTCTTGGCCTaGAGTTGCCACCTTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAGPRRWRGKRGGAWVSPLTLLA*SCHLHQ Trigger: CTGATGAAGGTGGCAACTCCAGGCCAAGAGGGTGAG...GGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCCAGCAAATTCCAGATGCCGGAGTCCAGGGCTaGCATCCCCTCCCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLDGGFLEGKRTQQIPDAGVQG*HPLPEA Trigger: TGCTTCGGGGAGGGGATGCCAGCCCTGGACTCCGGC...ATCTGGAATTTGCTGGGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | GACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACCCCCATTCACCAGTGTTTCCTaGCCCTCCTTCCCACTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DLGGGGVREEEPGFHPPPFTSVS*PSFPLS Trigger: ACTCAGTGGGAAGGAGGGCCAGGAAACACTGGTGAA...TGGGGGTGGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR TCA 90 bp | TTAAAGGCTGGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCCTCACAGCCACCTGTaGAGCATCACCCAAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LKAGVLGVPGARWRLSGRPHSHL*SITQGL Trigger: GAGGCCTTGGGTGATGCTTCACAGGTGGCTGTGAGG...CCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCCAGCCTTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGCTGGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGGAAGCAGCCTGTGGGTaGCAGGCCAGCACCGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKAGVLGVPGARWRLSGREAACG*QASTAF Trigger: AAAAGCGGTGCTGGCCTGCCACCCACAGGCTGCTTC...CCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCCAGCCTTTAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCGAATGTCAGGCCCCCTaGATAGAAGCTCACAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAGPRRWRGKRGGAWVSPECQAP*IEAHSL Trigger: AAGGCTGTGAGCTTCTATCCAGGGGGCCTGACATTC...GGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCCAGCAAATTCCAGATGCCACGGCCAGATTCTaGCCCCAGGCCTGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLDGGFLEGKRTQQIPDATARF*PQACQE Trigger: TTCCTGGCAGGCCTGGGGCCAGAATCTGGCCGTGGC...ATCTGGAATTTGCTGGGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGGAAAGGTGTACACAGAAGTCCCAGGGCCAAGCTAGCTAGGAATGCCAGAATGCCTAGCAGGCGGTaGCAGGCCTCAGCAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MRKGVHRSPRAKLARNARMPSRR*QASAGL Trigger: CAGCCCTGCTGAGGCCTGTCACCGCCTGCTAGGCAT...TCTGGCATTCCTAGCTAGCTTGGCCCTGGGACTTCTGTGTACACCTTTCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTACTGTTCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTGCACAAGGTCACCTCTaGCCCAGGGCAGCCTGTACG | + |
|
Preference number: 4 (lower is better) Translates to: WLYCSGIGLSCGSMLTLGAQGHL*PRAACT Trigger: CGTACAGGCTGCCCTGGGGCAGAGGTGACCTTGTGC...ACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGAACAGTAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTACTGTTCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTGCTCTGCTGCCTCCTTaGCACGGCCAGATTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLYCSGIGLSCGSMLTLGALLPP*HGQILA Trigger: GGCCAGAATCTGGCCGTGGCAAGGAGGCAGCAGAGC...ACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGAACAGTAGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTCCGAGCCAGCTCTGCTaGCTCCTTGCCACGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARNARGQSNKAGRDRVWCPSQLC*LLATAR Trigger: TCTGGCCGTGGCAAGGAGGCAGCAGAGCTGGCTCGG...ACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | AGAGCTGGACCTAGGCGGTGGAGGGGTAAGAGAGGAGGAGCCTGGGTTTCACCCACAGATGTAGCTGTGTaGGGCTCTTCTGCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RAGPRRWRGKRGGAWVSPTDVAV*GSSALP Trigger: TGGCAAAGCAGAAGAGCCGCACACAGCTACATCTGT...GGGTGAAACCCAGGCTCCTCCTCTCTTACCCCTCCACCGCCTAGGTCCAGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | TCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTGGGGCAAAGTGTGGTCAGCCTCACCCTaGAGGTCATGGAGGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SGIGLSCGSMLTLGWGKVWSASP*RSWRIR Trigger: CCGGATCCTCCATGACCTGCAGGGTGAGGCTGACCA...CACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | GCTAGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTGGCCAGGGTGGGCCCTaGCACCGCAACAGATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARNARGQSNKAGRDRVWCGQGGP*HRNRCS Trigger: GCTACATCTGTTGCGGTGCCAGGGCCCACCCTGGCC...ACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | TGGCTCTACTGTTCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTGGCTCTACCCGCAGGTaGAGAGGCAATGCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WLYCSGIGLSCGSMLTLGGSTRR*RGNACC Trigger: ACAGCAGGCATTGCCTCTGCACCTGCGGGTAGAGCC...ACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGAACAGTAGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGGAAAGGTGTACACAGAAGTCCCAGGGCCAAGCTAGCTAGGAATGCCAGATCCAGAAGCGCCACCTaGGCCTCCTCTTCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRKGVHRSPRAKLARNARSRSAT*ASSSRP Trigger: TGGCCTGGAAGAGGAGGCGCAGGTGGCGCTTCTGGA...TCTGGCATTCCTAGCTAGCTTGGCCCTGGGACTTCTGTGTACACCTTTCCTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTGGGGCAAAGTGAGCCAGGCAGCCTTGTaGGGCCATTATCGGAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SGIGLSCGSMLTLGWGKVSQAAL*GHYRRR Trigger: TCGTCTCCGATAATGGCCCCACAAGGCTGCCTGGCT...CACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| 3UTR CAA 72 bp | TCATACTGGCCAGGTATCAGGGCCTCCTCCAGCAGGTaGAGTCGTAATTGCCCCTGGTCATGGAGGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYWPGIRASSSR*SRNCPWSWRVC Trigger: GCAAACCCTCCATGACCAGGGGCAATTACGACTCAACCTGCTGGAGGAGGCCCTGATACCTGGCCAGTATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
||
| CDS-3UTR GCA 90 bp | AGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTATGCAGGTGCAGAGGCAATaGCTGCTGTCCACGCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RNARGQSNKAGRDRVWCMQVQRQ*LLSTPA Trigger: CGCTGGCGTGGACAGCAGGCATTGCCTCTGCACCTG...CATACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCCAGCAAATTCCAGATGCGGCTCTTCTGCTTTaGCAAGCACATGGCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLDGGFLEGKRTQQIPDAALLL*QAHGSW Trigger: CCAGCTGCCATGTGCTTGGCAAAGCAGAAGAGCCGC...ATCTGGAATTTGCTGGGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGCTGGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGACCAGGTCCACGTCATaGTCTGTGCCCTCAACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LKAGVLGVPGARWRLSGRTRSTS*SVPSTN Trigger: GTTTGTTGAGGGCACAGAGCATGACGTGGACCTGGT...CCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCCAGCCTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GAGCACAGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCCTCAGCAGCTGTAGGTaGTGGGACACCAGGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: EHRHLLLLLRPTDTVKHGLSSCR*WDTRHM Trigger: CATGTGCCTGGTGTCCCAGCACCTACAGCTGCTGAG...GCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTATGTCCAGGCTGATATCCTaGCGCCAGGGCCCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNARGQSNKAGRDRVWCMSRLIS*RQGPGK Trigger: CTTCCCTGGGCCCTGGCGCCAGGATATCAGCCTGGA...CATACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | GAGCACAGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCATGTTTCCAGGGCTCTaGACCCCACCCTCCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: EHRHLLLLLRPTDTVKHGMFPGL*TPPSSN Trigger: GTTGCTGGAGGGTGGGGTCCAGAGCCCTGGAAACAT...GCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCCAGCAAATTCCAGATACTGCCTCACCCTCTTaGCCTGGAGTTGCCACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLDGGFLEGKRTQQIPDTASPS*PGVATF Trigger: GAAGGTGGCAACTCCAGGCCAAGAGGGTGAGGCAGT...ATCTGGAATTTGCTGGGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR TCA 90 bp | GAGCACAGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCAAAGTGGTTGGGGTCTaGTTCCACCAGGTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EHRHLLLLLRPTDTVKHGKVVGV*FHQVQR Trigger: ACGCTGCACCTGGTGGAATCAGACCCCAACCACTTT...GCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTATGTCAATGCCCAAGCCCTaGCAGATGCCTAGCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RNARGQSNKAGRDRVWCMSMPKP*QMPSRR Trigger: CCGCCTGCTAGGCATCTGTCAGGGCTTGGGCATTGA...CATACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GCACAGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCCAGCAGAGTCTCTCTACTaGTCGGGGAACTCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AQTFASTAQANRHSEARPAESLY*SGNSAA Trigger: AGCTGCTGAGTTCCCCGAGCAGTAGAGAGACTCTGC...TGGCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTGGGGCAAAGTGGGGATGCAAAGTGGTTaGGGTCTGATTCCACCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SGIGLSCGSMLTLGWGKVGMQSG*GLIPPG Trigger: ACCTGGTGGAATCAGACCCCAACCACTTTGCATCCC...CACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
||
| CDS-3UTR GCA 90 bp | AGACATTTGCTTCTACTGCTCAGGCCAACAGACACAGTGAAGCACGGCCAGACATTCTGGCCCCAGGCCTaGCAGGAAGTAAGTAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RHLLLLLRPTDTVKHGQTFWPQA*QEVSSM Trigger: CATGCTACTTACTTCCTGGCAGGCCTGGGGCCAGAA...TGTCTGGCCGTGCTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTACCACCTGGGCCTCCTaGTCTGGTGCTAGCCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGLGILSTSTIIGTWRQSTTWAS*SGASPV Trigger: CACTGGGCTAGCACCAGAGCAGGAGGCCCAGGTGGT...AGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTTTTCTTCCAGGCCACACTaGGCCAGCGCCACCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WPWHSVYIHYNRNLEAVFSSRPH*ASATLS Trigger: ACTGAGGGTGGCGCTGGCTCAGTGTGGCCTGGAAGA...AAAGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAGAAGCTGCTATTTGTTAGTTCTTTAAAGGCTGGAGTCCTGGGGGTACCTAGAGACCAGCAGGACTaGCTCACCCTCTTGGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKKLLFVSSLKAGVLGVPRDQQD*LTLLAW Trigger: CCAGGCCAAGAGGGTGAGGCAGTCCTGCTGGTCTCT...AGGTACCCCCAGGACTCCAGCCTTTAAAGAACTAACAAATAGCAGCTTCTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | AATCCAGAAGACTTTGGTGTCACAATGGCTCTACTGTTCTGGAATAGGCCTGAGTGCAGAGGCAATGCCTaGTGTCCACGCCAGCGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NPEDFGVTMALLFWNRPECRGNA*CPRQRQ Trigger: CTGTCGCTGGCGTGGACAGCAGGCATTGCCTCTGCA...CTCAGGCCTATTCCAGAACAGTAGAGCCATTGTGACACCAAAGTCTTCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAGAAGCTGCTATTTGTTAGTTCTTTAAAGGCTGGAGTCCTGGGGGTACCTCCAAGCCCTGACAGATaGCTAGCAGGCGGTGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VKKLLFVSSLKAGVLGVPPSPDR*LAGGDR Trigger: CCTGTCACCGCCTGCTAGGCATCTGTCAGGGCTTGG...AGGTACCCCCAGGACTCCAGCCTTTAAAGAACTAACAAATAGCAGCTTCTTCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTGGGGCAAAGTGAGCACCGCTTTTCCATaGTTCTTCCTTTCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGIGLSCGSMLTLGWGKVSTAFP*FFLSIQ Trigger: CTGGATGGAAAGGAAGAACCATGGAAAAGCGGTGCT...CACTTTGCCCCAACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | GGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACTCAGTCACATCAAAGTaGATAAAGGTCTGTACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GVLGVPGARWRLSGRQEDSVTSK*IKVCTS Trigger: ACTGGTACAGACCTTTATCCACTTTGATGTGACTGA...GTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTATGTCACCCTGCAGGTCATaGAGGATCCGGGAAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RNARGQSNKAGRDRVWCMSPCRS*RIREKC Trigger: GCACTTTTCCCGGATCCTCCATGACCTGCAGGGTGA...CATACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAAGCTGCTATTTGTTAGTTCTTTAAAGGCTGGAGTCCTGGGGGTACCTAGGGGCCTATCACCCTaGATCCGACACACCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKKLLFVSSLKAGVLGVPRGLSP*IRHTTA Trigger: TGCAGTGGTGTGTCGGATTCAGGGTGATAGGCCCCT...AGGTACCCCCAGGACTCCAGCCTTTAAAGAACTAACAAATAGCAGCTTCTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTCCATCCTTCACCAGCTaGACGCCTACTGCTCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VGLGILSTSTIIGTWRQSPSFTS*TPTAPD Trigger: GTCAGGAGCAGTAGGCGTGCAGCTGGTGAAGGATGG...AGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTTTAGGATCCGGGAAAAGTaGTCACGGCACTGGGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WPWHSVYIHYNRNLEAVFRIREK*SRHWGP Trigger: TGGGCCCCAGTGCCGTGAGCACTTTTCCCGGATCCT...AAAGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR GCA 90 bp | AATCCAGAAGACTTTGGTGTCACAATGGCTCTACTGTTCTGGAATAGGCCTGAGAGTGGGCATGCAGGCTaGAGTCTCTGTGAAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPEDFGVTMALLFWNRPESGHAG*SLCEAR Trigger: CCTGGCTTCACAGAGACTGCAGCCTGCATGCCCACT...CTCAGGCCTATTCCAGAACAGTAGAGCCATTGTGACACCAAAGTCTTCTGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAAGCTGCTATTTGTTAGTTCTTTAAAGGCTGGAGTCCTGGGGGTACCTCGGTTCTCCAGCAGCTaGGACAGCTCCGATGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VKKLLFVSSLKAGVLGVPRFSSS*DSSDEV Trigger: AACCTCATCGGAGCTGTCCCAGCTGCTGGAGAACCG...AGGTACCCCCAGGACTCCAGCCTTTAAAGAACTAACAAATAGCAGCTTCTTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGGAAAGGTGTACACAGAAGTCCCAGGGCCAAGCTAGCTAGGAATGCCAGAAAGGTCTGTACCAGTTaGGATGCAAAGTGGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: MRKGVHRSPRAKLARNARKVCTS*DAKWLG Trigger: CCCCAACCACTTTGCATCCCAACTGGTACAGACCTT...TCTGGCATTCCTAGCTAGCTTGGCCCTGGGACTTCTGTGTACACCTTTCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| CDS-3UTR TCA 90 bp | GTTGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTAAAGTGGTTGGGGTCTaGTTCCACCAGGTGCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: VGLGILSTSTIIGTWRQSKVVGV*FHQVQR Trigger: TCGCTGCACCTGGTGGAATCAGACCCCAACCACTTT...AGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS-3UTR CCA 90 bp | ACTTTGGTGTCACAATGGCTCTACTGTTCTGGAATAGGCCTGAGTTGTGGTAGCAATCTCGATGAGCCTTaGCCCAGCCCCAGTCATCTT | + |
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Preference number: 4 (lower is better) Translates to: TLVSQWLYCSGIGLSCGSNLDEP*PSPSHL Trigger: AAGATGACTGGGGCTGGGCCAAGGCTCATCGAGATT...GCTACCACAACTCAGGCCTATTCCAGAACAGTAGAGCCATTGTGACACCAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTTTGGGCAACAGGGTAGTTaGGCCTGTCAATGCCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: WPWHSVYIHYNRNLEAVFGQQGS*ACQCPS Trigger: GCTTGGGCATTGACAGGCCCAACTACCCTGTTGCCC...AAAGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR GCA 90 bp | ACTTGTTTTATGGTCCTTGAATCCAGAAGACTTTGGTGTCACAATGGCTCTACTCCGATCACCAGCAGCTaGTTGCCGTCCATGAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: TCFMVLESRRLWCHNGSTPITSS*LPSMRW Trigger: CCACCTCATGGACGGCAAGCAGCTGCTGGTGATCGG...AGTAGAGCCATTGTGACACCAAAGTCTTCTGGATTCAAGGACCATAAAACAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR GCA 90 bp | AATCCAGAAGACTTTGGTGTCACAATGGCTCTACTGTTCTGGAATAGGCCTGAGACAGAGATAGGAAGGTaGTGGGAGAACCCAGAATGC | + |
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Preference number: 4 (lower is better) Translates to: NPEDFGVTMALLFWNRPETEIGR*WENPEC Trigger: GCATTCTGGGTTCTCCCAGCACCTTCCTATCTCTGT...CTCAGGCCTATTCCAGAACAGTAGAGCCATTGTGACACCAAAGTCTTCTGGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CCA 90 bp | ACTTGTTTTATGGTCCTTGAATCCAGAAGACTTTGGTGTCACAATGGCTCTACTCAACAGGCCACAGCATaGAGAGAGGTCGAAGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: TCFMVLESRRLWCHNGSTQQATA*REVEGQ Trigger: CTGGCCTTCGACCTCTCTCCATGCTGTGGCCTGTTG...AGTAGAGCCATTGTGACACCAAAGTCTTCTGGATTCAAGGACCATAAAACAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CCA 90 bp | AATCCAGAAGACTTTGGTGTCACAATGGCTCTACTGTTCTGGAATAGGCCTGAGAATTGCCCCTGGTCATaGAGGGTTTGCAGAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: NPEDFGVTMALLFWNRPENCPWS*RVCRVS Trigger: AGAGACTCTGCAAACCCTCCATGACCAGGGGCAATT...CTCAGGCCTATTCCAGAACAGTAGAGCCATTGTGACACCAAAGTCTTCTGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTTTGAGATAGGAAGGTGCTaGGAGAACCCAGAATGCACA | + |
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Preference number: 4 (lower is better) Translates to: WPWHSVYIHYNRNLEAVFEIGRC*ENPECT Trigger: TGTGCATTCTGGGTTCTCCCAGCACCTTCCTATCTC...AAAGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTTTAAGGTCTGTACCAGTTaGGATGCAAAGTGGTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WPWHSVYIHYNRNLEAVFKVCTS*DAKWLG Trigger: CCCCAACCACTTTGCATCCCAACTGGTACAGACCTT...AAAGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| CDS-3UTR CCA 90 bp | GTGAAGAAGCTGCTATTTGTTAGTTCTTTAAAGGCTGGAGTCCTGGGGGTACCTCAGTTTCATCACACCTaGCAGGGGTACCTGGTAAAT | + |
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Preference number: 4 (lower is better) Translates to: VKKLLFVSSLKAGVLGVPQFHHT*QGYLVN Trigger: ATTTACCAGGTACCCCTGCCAGGTGTGATGAAACTG...AGGTACCCCCAGGACTCCAGCCTTTAAAGAACTAACAAATAGCAGCTTCTTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| 3UTR CAA 72 bp | AGGGAAATGTTTACTCCTAGTGCTGAGCACAGACATTaGCTTCTACTGCTCAGGCCAACAGACACAGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: REMFTPSAEHRH*LLLLRPTDTVK Trigger: CTTCACTGTGTCTGTTGGCCTGAGCAGTAGAAGCAAATGTCTGTGCTCAGCACTAGGAGTAAACATTTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| CDS-3UTR CCA 90 bp | ACTTGTTTTATGGTCCTTGAATCCAGAAGACTTTGGTGTCACAATGGCTCTACTGGGATGCAAAGTGGTTaGGGTCTGATTCCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: TCFMVLESRRLWCHNGSTGMQSG*GLIPPG Trigger: ACCTGGTGGAATCAGACCCCAACCACTTTGCATCCC...AGTAGAGCCATTGTGACACCAAAGTCTTCTGGATTCAAGGACCATAAAACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| 3UTR CAA 72 bp | GGACCCAGCAAATTCCAGATACTTGTTTTATGGTCCTaGAATCCAGAAGACTTTGGTGTCACAATGGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: GPSKFQILVLWS*NPEDFGVTMAL Trigger: TAGAGCCATTGTGACACCAAAGTCTTCTGGATTCAAGGACCATAAAACAAGTATCTGGAATTTGCTGGGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| CDS CCA 90 bp | ACGCCGCCGGCGCCGATCACCAGCAGCTGCTTGCCGTCCATGAGGTaGCGCCCTGAGCGCCGCAGCATAGTCTCCACCAGCGGCGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: TPPAPITSSCLPSMR*RPERRSIVSTSGAA Trigger: GGCAGCGCCGCTGGTGGAGACTATGCTGCGGCGCTCAGGGCGCCACCTCATGGACGGCAAGCAGCTGCTGGTGATCGGCGCCGGCGGCGT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | GGCGCCGATCACCAGCAGCTGCTTGCCGTCCATGAGGTGGCGCCCTaGGCGCCGCAGCATAGTCTCCACCAGCGGCGCTGCCGCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GADHQQLLAVHEVAP*APQHSLHQRRCRCL Trigger: GAGGCAGCGGCAGCGCCGCTGGTGGAGACTATGCTGCGGCGCTCAGGGCGCCACCTCATGGACGGCAAGCAGCTGCTGGTGATCGGCGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | CCTCCAGGGCCAGCACAGCGGCCAACGCGCCTTCGGCTGCTTCTTTaGTGCCCTGCTCCAGAAGCGCCACCTGCGCCTCCTCTTCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PPGPAQRPTRLRLLL*CPAPEAPPAPPLPG Trigger: GCCTGGAAGAGGAGGCGCAGGTGGCGCTTCTGGAGCAGGGCATCAAAGAAGCAGCCGAAGGCGCGTTGGCCGCTGTGCTGGCCCTGGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 90 bp | CAGTCCAGCCTCCAGGGCCAGCACAGCGGCCAACGCGCCTTCGGCTaGTTCTTTGATGCCCTGCTCCAGAAGCGCCACCTGCGCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: QSSLQGQHSGQRAFG*FFDALLQKRHLRLL Trigger: GAGGAGGCGCAGGTGGCGCTTCTGGAGCAGGGCATCAAAGAAGCAGCCGAAGGCGCGTTGGCCGCTGTGCTGGCCCTGGAGGCTGGACTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 90 bp | CCAGGTGCAGCGAGGAAGTCGGTGTGCACTTGGCGTCCACCACGCTaGTCCACACTCAGTCCAGCCTCCAGGGCCAGCACAGCGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: PGAARKSVCTWRPPR*STLSPASRASTAAN Trigger: GTTGGCCGCTGTGCTGGCCCTGGAGGCTGGACTGAGTGTGGAGCAGCGTGGTGGACGCCAAGTGCACACCGACTTCCTCGCTGCACCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS GCA 90 bp | AAGTCCACGCCGAGGAAGTCGGTGTGCACTTGGCGTCCACCACGCTaGTCCACACTCAGTCCAGCCTCCAGGGCCAGCACAGCGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KSTPRKSVCTWRPPR*STLSPASRASTAAN Trigger: GTTGGCCGCTGTGCTGGCCCTGGAGGCTGGACTGAGTGTGGAGCAGCGTGGTGGACGCCAAGTGCACACCGACTTCCTCGGCGTGGACTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | GCAGGTGCAGAGGCAATGCCTGCTGTCCACGCCAGCGACAGCCACTaGGCCTCACAGCCACCTGTGAAGCATCACCCAAGGCCTCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: AGAEAMPAVHASDSH*ASQPPVKHHPRPRS Trigger: ACTCCGAGGCCTTGGGTGATGCTTCACAGGTGGCTGTGAGGCTCAGTGGCTGTCGCTGGCGTGGACAGCAGGCATTGCCTCTGCACCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 90 bp | CGTGTTCACCACTGTGGATGGCTCTACCCGCAGGTGCAGAGGCAATaGCTGCTGTCCACGCCAGCGACAGCCACTGAGCCTCACAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: RVHHCGWLYPQVQRQ*LLSTPATATEPHSH Trigger: GTGGCTGTGAGGCTCAGTGGCTGTCGCTGGCGTGGACAGCAGGCATTGCCTCTGCACCTGCGGGTAGAGCCATCCACAGTGGTGAACACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 90 bp | GAGATTCCGAGCCAGCTCTGCTGCCTCCTTGCCACGGCCAGATTCTaGCCCCAGGCCTGCCAGGAAGTAAGTAGCATGCCGAGGGGGAAC | + |
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Preference number: 5 (lower is better) Translates to: EIPSQLCCLLATARF*PQACQEVSSMPRGN Trigger: GTTCCCCCTCGGCATGCTACTTACTTCCTGGCAGGCCTGGGGCCAGAATCTGGCCGTGGCAAGGAGGCAGCAGAGCTGGCTCGGAATCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | CCACCTCATCAGCAGCCGGTTCTCCAGCAGCTGGGACAGCTCCGATaGGGTTCCTGTGGGGCAAGTGAGATTCCGAGCCAGCTCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PPHQQPVLQQLGQLR*GSCGASEIPSQLCC Trigger: GCAGCAGAGCTGGCTCGGAATCTCACTTGCCCCACAGGAACCTCATCGGAGCTGTCCCAGCTGCTGGAGAACCGGCTGCTGATGAGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 90 bp | TTCACCACTGTGGATGGCTCTACCCGCAGGTGCAGAGGCAATGCCTaGTGTCCACGCCAGCGACAGCCACTGAGCCTCACAGCCACCTGT | + |
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Preference number: 5 (lower is better) Translates to: FTTVDGSTRRCRGNA*CPRQRQPLSLTATC Trigger: ACAGGTGGCTGTGAGGCTCAGTGGCTGTCGCTGGCGTGGACAGCAGGCATTGCCTCTGCACCTGCGGGTAGAGCCATCCACAGTGGTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 90 bp | AATCCCAGCACCGTGTTCACCACTGTGGATGGCTCTACCCGCAGGTaGAGAGGCAATGCCTGCTGTCCACGCCAGCGACAGCCACTGAGC | + |
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Preference number: 5 (lower is better) Translates to: NPSTVFTTVDGSTRR*RGNACCPRQRQPLS Trigger: GCTCAGTGGCTGTCGCTGGCGTGGACAGCAGGCATTGCCTCTGCACCTGCGGGTAGAGCCATCCACAGTGGTGAACACGGTGCTGGGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 90 bp | AGTGGTTGGGGTCTGATTCCACCAGGTGCAGCGAGGAAGTCGGTGTaGACTTGGCGTCCACCACGCTGCTCCACACTCAGTCCAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SGWGLIPPGAARKSV*TWRPPRCSTLSPAS Trigger: GGAGGCTGGACTGAGTGTGGAGCAGCGTGGTGGACGCCAAGTGCACACCGACTTCCTCGCTGCACCTGGTGGAATCAGACCCCAACCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS CCA 90 bp | CAGGCTGATATCCTGGCGCCAGGGCCCAGGGAAGCAGCCTGTGGGTaGCAGGCCAGCACCGCTTTTCCATGGTTCTTCCTTTCCATCCAG | + |
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Preference number: 5 (lower is better) Translates to: QADILAPGPREAACG*QASTAFPWFFLSIQ Trigger: CTGGATGGAAAGGAAGAACCATGGAAAAGCGGTGCTGGCCTGCCACCCACAGGCTGCTTCCCTGGGCCCTGGCGCCAGGATATCAGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 90 bp | TCCCCGAAGCAGCCCCGGAGGCCTATAAGTGAAAGCCAGGGTAGCTaGCACGGCCACACCACTCTGCTGGGACAGCAACCACCTCATCAG | + |
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Preference number: 5 (lower is better) Translates to: SPKQPRRPISESQGS*HGHTTLLGQQPPHQ Trigger: CTGATGAGGTGGTTGCTGTCCCAGCAGAGTGGTGTGGCCGTGCCAGCTACCCTGGCTTTCACTTATAGGCCTCCGGGGCTGCTTCGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CAA 90 bp | GGAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACAGCTCTGCTGCCTCCTaGCCACGGCCAGATTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: GVLGVPGARWRLSGRQEDSSAAS*PRPDSG Trigger: GCCAGAATCTGGCCGTGGCAAGGAGGCAGCAGAGCT...GTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | TCTCCAGCAGCTGGGACAGCTCCGATGAGGTTCCTGTGGGGCAAGTaGGATTCCGAGCCAGCTCTGCTGCCTCCTTGCCACGGCCAGATT | + |
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Preference number: 5 (lower is better) Translates to: SPAAGTAPMRFLWGK*DSEPALLPPCHGQI Trigger: AATCTGGCCGTGGCAAGGAGGCAGCAGAGCTGGCTCGGAATCTCACTTGCCCCACAGGAACCTCATCGGAGCTGTCCCAGCTGCTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | CTGCTGTCCACGCCAGCGACAGCCACTGAGCCTCACAGCCACCTGTaGAGCATCACCCAAGGCCTCGGAGTGCACAAAGGCCTCTACTTC | + |
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Preference number: 5 (lower is better) Translates to: LLSTPATATEPHSHL*SITQGLGVHKGLYF Trigger: GAAGTAGAGGCCTTTGTGCACTCCGAGGCCTTGGGTGATGCTTCACAGGTGGCTGTGAGGCTCAGTGGCTGTCGCTGGCGTGGACAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | CGGCCCACGCCACACACCACCTTACTCAGTAGGGGCCTATCACCCTaGATCCGACACACCACTGCACAGATACGCACAGCCAGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RPTPHTTLLSRGLSP*IRHTTAQIRTASSG Trigger: CCCTGAGCTGGCTGTGCGTATCTGTGCAGTGGTGTGTCGGATTCAGGGTGATAGGCCCCTACTGAGTAAGGTGGTGTGTGGCGTGGGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 90 bp | CTCCAGCTTCTCCAGCAATCCCAGCACCGTGTTCACCACTGTGGATaGCTCTACCCGCAGGTGCAGAGGCAATGCCTGCTGTCCACGCCA | + |
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Preference number: 5 (lower is better) Translates to: LQLLQQSQHRVHHCG*LYPQVQRQCLLSTP Trigger: TGGCGTGGACAGCAGGCATTGCCTCTGCACCTGCGGGTAGAGCCATCCACAGTGGTGAACACGGTGCTGGGATTGCTGGAGAAGCTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 90 bp | CACCCTCCAGCAACAGAGATAGGAAGGTGCTGGGAGAACCCAGAATaGACAAGGTCACCTCTGCCCCAGGGCAGCCTGTACGAGGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: HPPATEIGRCWENPE*TRSPLPQGSLYEVP Trigger: AGGCACCTCGTACAGGCTGCCCTGGGGCAGAGGTGACCTTGTGCATTCTGGGTTCTCCCAGCACCTTCCTATCTCTGTTGCTGGAGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 90 bp | GCTCACAGCCTTAGAGACCAGCAGGACTGCCTCACCCTCTTGGCCTaGAGTTGCCACCTTCATCAGCCAAGCAGGGGACAGGCAAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: AHSLRDQQDCLTLLA*SCHLHQPSRGQAKE Trigger: CTCCTTTGCCTGTCCCCTGCTTGGCTGATGAAGGTGGCAACTCCAGGCCAAGAGGGTGAGGCAGTCCTGCTGGTCTCTAAGGCTGTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CAA 90 bp | GAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCTTTCCATCCAGGTCCTaGGAGTCCCACTCCGTACCC | + |
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Preference number: 5 (lower is better) Translates to: ESWGYLGLDGGFLEGKRTFPSRS*ESHSVP Trigger: GGGTACGGAGTGGGACTCCAAGGACCTGGATGGAAA...GGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CAA 90 bp | GCAGGTTTCAGGAGCTGTCCTCGGCTCCTGAGCAAAGACAGGTGTTTTCAGAGTTCCCACACGAACTTCTaGCTGACGCCGCCGGCGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AGFRSCPRLLSKDRCFQSSHTNF*LTPPAP Trigger: CGGCGCCGGCGGCGTCAGCAAGAAGTTCGTGTGGGA...ACTCTGAAAACACCTGTCTTTGCTCAGGAGCCGAGGACAGCTCCTGAAACCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | GTGGATAAAGGTCTGTACCAGTTGGGATGCAAAGTGGTTGGGGTCTaGTTCCACCAGGTGCAGCGTCAGTCCGTAGTCCCGCGCCGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VDKGLYQLGCKVVGV*FHQVQRQSVVPRRL Trigger: GAGGCGGCGCGGGACTACGGACTGACGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACAGACCTTTATCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 90 bp | TGTACCAGTTGGGATGCAAAGTGGTTGGGGTCTGATTCCACCAGGTaGAGCGAGGAAGTCGGTGTGCACTTGGCGTCCACCACGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CTSWDAKWLGSDSTR*SEEVGVHLASTTLL Trigger: GAGCAGCGTGGTGGACGCCAAGTGCACACCGACTTCCTCGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS-3UTR CAA 90 bp | GAGTCCTGGGGGTACCTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCCTCAGGAAGGCCAGCTaGCTGCAGACAACTCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESWGYLGLDGGFLEGKRTLRKAS*LQTTLK Trigger: CTTCAGAGTTGTCTGCAGCAAGCTGGCCTTCCTGAG...GGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAGGTACCCCCAGGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 90 bp | AGCATGCCGAGGGGGAACAAAGTCATCCAGGAATGTCAGGCCCCCTaGATAGAAGCTCACAGCCTTAGAGACCAGCAGGACTGCCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SMPRGNKVIQECQAP*IEAHSLRDQQDCLT Trigger: GGTGAGGCAGTCCTGCTGGTCTCTAAGGCTGTGAGCTTCTATCCAGGGGGCCTGACATTCCTGGATGACTTTGTTCCCCCTCGGCATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CAA 90 bp | CTGGGGCTAGATGGAGGCTTTCTGGAAGGCAAGAGGACCCAGCAAATTCCAGATATCACCAGCAGCTGCTaGCCGTCCATGAGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LGLDGGFLEGKRTQQIPDITSSC*PSMRWR Trigger: GCGCCACCTCATGGACGGCAAGCAGCTGCTGGTGAT...ATCTGGAATTTGCTGGGTCCTCTTGCCTTCCAGAAAGCCTCCATCTAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CAA 90 bp | TGGCTCTACTGTTCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTGACTGCCTCACCCTCTaGGCCTGGAGTTGCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: WLYCSGIGLSCGSMLTLGDCLTL*AWSCHL Trigger: AAGGTGGCAACTCCAGGCCAAGAGGGTGAGGCAGTC...ACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGAACAGTAGAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 90 bp | GTGGATAAAGGTCTGTACCAGTTGGGATGCAAAGTGGTTGGGGTCTaGTTCCACCAGGTGCAGCGAGGAAGTCGGTGTGCACTTGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VDKGLYQLGCKVVGV*FHQVQRGSRCALGV Trigger: GACGCCAAGTGCACACCGACTTCCTCGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACAGACCTTTATCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS-3UTR CAA 90 bp | TGGCTCTACTGTTCTGGAATAGGCCTGAGTTGTGGTAGCATGCTGACCCTGGGTTGGGATGCAAAGTGGTaGGGGTCTGATTCCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WLYCSGIGLSCGSMLTLGWDAKW*GSDSTR Trigger: CCTGGTGGAATCAGACCCCAACCACTTTGCATCCCA...ACCCAGGGTCAGCATGCTACCACAACTCAGGCCTATTCCAGAACAGTAGAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| CDS CCA 90 bp | CTCCGGTGCTCAGTCACATCAAAGTGGATAAAGGTCTGTACCAGTTaGGATGCAAAGTGGTTGGGGTCTGATTCCACCAGGTGCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: LRCSVTSKWIKVCTS*DAKWLGSDSTRCSV Trigger: GACGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACAGACCTTTATCCACTTTGATGTGACTGAGCACCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CAA 90 bp | GCTAGGAATGCCAGAGGCCAAAGCAACAAAGCTGGTAGAGATCGTGTGTGGTGTTGGGATGCAAAGTGGTaGGGGTCTGATTCCACCAGG | + |
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Preference number: 5 (lower is better) Translates to: ARNARGQSNKAGRDRVWCWDAKW*GSDSTR Trigger: CCTGGTGGAATCAGACCCCAACCACTTTGCATCCCA...ACACCACACACGATCTCTACCAGCTTTGTTGCTTTGGCCTCTGGCATTCCTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| CDS CCA 90 bp | AGCAGCGCATTCTCCTCATCCCTCCGGTGCTCAGTCACATCAAAGTaGATAAAGGTCTGTACCAGTTGGGATGCAAAGTGGTTGGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SSAFSSSLRCSVTSK*IKVCTSWDAKWLGS Trigger: AGACCCCAACCACTTTGCATCCCAACTGGTACAGACCTTTATCCACTTTGATGTGACTGAGCACCGGAGGGATGAGGAGAATGCGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CAA 90 bp | TCCACGTCATGCTCTGTGCCCTCAACAAACTCCATCAGCAGCATAGCATTGCCCAAAGGTCTGTACCAGTaGGGATGCAAAGTGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: STSCSVPSTNSISSIALPKGLYQ*GCKVVG Trigger: CCCAACCACTTTGCATCCCAACTGGTACAGACCTTT...GGGCAATGCTATGCTGCTGATGGAGTTTGTTGAGGGCACAGAGCATGACGTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTATCAGCAGCATAGCATaGCCCCAGCCCAGCCCGATG | + |
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Preference number: 5 (lower is better) Translates to: VGLGILSTSTIIGTWRQSISSIA*PQPSPM Trigger: CATCGGGCTGGGCTGGGGCAATGCTATGCTGCTGAT...AGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS-3UTR CAA 90 bp | GTTGGCCTTGGCATTCTGTCTACATCCACTATAATAGGAACTTGGAGGCAGTCTAAAGGTCTGTACCAGTaGGGATGCAAAGTGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: VGLGILSTSTIIGTWRQSKGLYQ*GCKVVG Trigger: CCCAACCACTTTGCATCCCAACTGGTACAGACCTTT...AGACTGCCTCCAAGTTCCTATTATAGTGGATGTAGACAGAATGCCAAGGCCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167055.2 ENSMUST00000237815.2 |
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| CDS CAA 72 bp | TTGCTGACGCCGCCGGCGCCGATCACCAGCAGCTGCTaGCCGTCCATGAGGTGGCGCCCTGAGCGCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: LLTPPAPITSSC*PSMRWRPERRS Trigger: GCTGCGGCGCTCAGGGCGCCACCTCATGGACGGCAAGCAGCTGCTGGTGATCGGCGCCGGCGGCGTCAGCAA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | CACCAGCAGCTGCTTGCCGTCCATGAGGTGGCGCCCTaGGCGCCGCAGCATAGTCTCCACCAGCGGCGCTGC | + |
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Preference number: 6 (lower is better) Translates to: HQQLLAVHEVAP*APQHSLHQRRC Trigger: GCAGCGCCGCTGGTGGAGACTATGCTGCGGCGCTCAGGGCGCCACCTCATGGACGGCAAGCAGCTGCTGGTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | CGTAGTCCCGCGCCGCCTCCCACACGAACTTCTTGCTaGCGCCGCCGGCGCCGATCACCAGCAGCTGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: RSPAPPPTRTSC*RRRRRSPAAAC Trigger: GCAAGCAGCTGCTGGTGATCGGCGCCGGCGGCGTCAGCAAGAAGTTCGTGTGGGAGGCGGCGCGGGACTACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CAA 90 bp | GCCTCCAGGGCCAGCACAGCGGCCAACGCGCCTTCGGCTGCTTCTTaGATGCCCTGCTCCAGAAGCGCCACCTGCGCCTCCTCTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASRASTAANAPSAAS*MPCSRSATCASSSR Trigger: CCTGGAAGAGGAGGCGCAGGTGGCGCTTCTGGAGCAGGGCATCAAAGAAGCAGCCGAAGGCGCGTTGGCCGCTGTGCTGGCCCTGGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 72 bp | GCGCCGATCACCAGCAGCTGCTTGCCGTCCATGAGGTaGCGCCCTGAGCGCCGCAGCATAGTCTCCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: APITSSCLPSMR*RPERRSIVSTS Trigger: GCTGGTGGAGACTATGCTGCGGCGCTCAGGGCGCCACCTCATGGACGGCAAGCAGCTGCTGGTGATCGGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CAA 72 bp | GCCAGCACAGCGGCCAACGCGCCTTCGGCTGCTTCTTaGATGCCCTGCTCCAGAAGCGCCACCTGCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASTAANAPSAAS*MPCSRSATCAS Trigger: GGAGGCGCAGGTGGCGCTTCTGGAGCAGGGCATCAAAGAAGCAGCCGAAGGCGCGTTGGCCGCTGTGCTGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | CCAGCACAGCGGCCAACGCGCCTTCGGCTGCTTCTTTaGTGCCCTGCTCCAGAAGCGCCACCTGCGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PAQRPTRLRLLL*CPAPEAPPAPP Trigger: AGGAGGCGCAGGTGGCGCTTCTGGAGCAGGGCATCAAAGAAGCAGCCGAAGGCGCGTTGGCCGCTGTGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 72 bp | CCTCTGCCCCAGGGCAGCCTGTACGAGGTGCCTGGCTaGGATCCTGGGTCTCAGGAAGGCCAGCTTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: PLPQGSLYEVPG*DPGSQEGQLAA Trigger: TGCAGCAAGCTGGCCTTCCTGAGACCCAGGATCGCAGCCAGGCACCTCGTACAGGCTGCCCTGGGGCAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 72 bp | GTCACCTCTGCCCCAGGGCAGCCTGTACGAGGTGCCTaGCTGCGATCCTGGGTCTCAGGAAGGCCAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: VTSAPGQPVRGA*LRSWVSGRPAC Trigger: GCAAGCTGGCCTTCCTGAGACCCAGGATCGCAGCCAGGCACCTCGTACAGGCTGCCCTGGGGCAGAGGTGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CAA 72 bp | GTCCAGGCCCGAGCCTCAGTCTCTTCCGGGGAGCCCTaGCAATCCAGGCTGATATCCTGGCGCCAGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VQARASVSSGEP*QSRLISWRQGP Trigger: TGGGCCCTGGCGCCAGGATATCAGCCTGGATTGCAAGGGCTCCCCGGAAGAGACTGAGGCTCGGGCCTGGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | CCTCAGTCTCTTCCGGGGAGCCCTTGCAATCCAGGCTaGTATCCTGGCGCCAGGGCCCAGGGAAGCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PQSLPGSPCNPG*YPGARAQGSSL Trigger: CAGGCTGCTTCCCTGGGCCCTGGCGCCAGGATATCAGCCTGGATTGCAAGGGCTCCCCGGAAGAGACTGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 72 bp | TCCTGTGGGGCAAGTGAGATTCCGAGCCAGCTCTGCTaGCTCCTTGCCACGGCCAGATTCTGGCCCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: SCGASEIPSQLC*LLATARFWPQA Trigger: GGCCTGGGGCCAGAATCTGGCCGTGGCAAGGAGGCAGCAGAGCTGGCTCGGAATCTCACTTGCCCCACAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 72 bp | GTGGATGGCTCTACCCGCAGGTGCAGAGGCAATGCCTaGTGTCCACGCCAGCGACAGCCACTGAGCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: VDGSTRRCRGNA*CPRQRQPLSLT Trigger: TGTGAGGCTCAGTGGCTGTCGCTGGCGTGGACAGCAGGCATTGCCTCTGCACCTGCGGGTAGAGCCATCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 72 bp | CACTGTGGATGGCTCTACCCGCAGGTGCAGAGGCAATaGCTGCTGTCCACGCCAGCGACAGCCACTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: HCGWLYPQVQRQ*LLSTPATATEP Trigger: AGGCTCAGTGGCTGTCGCTGGCGTGGACAGCAGGCATTGCCTCTGCACCTGCGGGTAGAGCCATCCACAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | GCTGGGACAGCTCCGATGAGGTTCCTGTGGGGCAAGTaGGATTCCGAGCCAGCTCTGCTGCCTCCTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: AGTAPMRFLWGK*DSEPALLPPCH Trigger: GTGGCAAGGAGGCAGCAGAGCTGGCTCGGAATCTCACTTGCCCCACAGGAACCTCATCGGAGCTGTCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | GAGGCAATGCCTGCTGTCCACGCCAGCGACAGCCACTaGGCCTCACAGCCACCTGTGAAGCATCACCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: EAMPAVHASDSH*ASQPPVKHHPR Trigger: CCTTGGGTGATGCTTCACAGGTGGCTGTGAGGCTCAGTGGCTGTCGCTGGCGTGGACAGCAGGCATTGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 72 bp | GTGAAAGCCAGGGTAGCTGGCACGGCCACACCACTCTaGTGGGACAGCAACCACCTCATCAGCAGCCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VKARVAGTATPL*WDSNHLISSRF Trigger: GAACCGGCTGCTGATGAGGTGGTTGCTGTCCCAGCAGAGTGGTGTGGCCGTGCCAGCTACCCTGGCTTTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 72 bp | AAAGCCAGGGTAGCTGGCACGGCCACACCACTCTGCTaGGACAGCAACCACCTCATCAGCAGCCGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KARVAGTATPLC*DSNHLISSRFS Trigger: GGAGAACCGGCTGCTGATGAGGTGGTTGCTGTCCCAGCAGAGTGGTGTGGCCGTGCCAGCTACCCTGGCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 72 bp | CAGCCCCGGAGGCCTATAAGTGAAAGCCAGGGTAGCTaGCACGGCCACACCACTCTGCTGGGACAGCAACCA | + |
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Preference number: 6 (lower is better) Translates to: QPRRPISESQGS*HGHTTLLGQQP Trigger: TGGTTGCTGTCCCAGCAGAGTGGTGTGGCCGTGCCAGCTACCCTGGCTTTCACTTATAGGCCTCCGGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 72 bp | TGCCTCCTTGCCACGGCCAGATTCTGGCCCCAGGCCTaGCAGGAAGTAAGTAGCATGCCGAGGGGGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: CLLATARFWPQA*QEVSSMPRGNK Trigger: TTTGTTCCCCCTCGGCATGCTACTTACTTCCTGGCAGGCCTGGGGCCAGAATCTGGCCGTGGCAAGGAGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 72 bp | AGCAACCACCTCATCAGCAGCCGGTTCTCCAGCAGCTaGGACAGCTCCGATGAGGTTCCTGTGGGGCAAGTG | + |
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Preference number: 6 (lower is better) Translates to: SNHLISSRFSSS*DSSDEVPVGQV Trigger: CACTTGCCCCACAGGAACCTCATCGGAGCTGTCCCAGCTGCTGGAGAACCGGCTGCTGATGAGGTGGTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS GCA 72 bp | TGGGATGCAAAGTGGTTGGGGTCTGATTCCACCAGGTaGAGCGAGGAAGTCGGTGTGCACTTGGCGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: WDAKWLGSDSTR*SEEVGVHLAST Trigger: GGTGGACGCCAAGTGCACACCGACTTCCTCGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS CCA 72 bp | ACAGCCTTAGAGACCAGCAGGACTGCCTCACCCTCTTaGCCTGGAGTTGCCACCTTCATCAGCCAAGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TALETSRTASPS*PGVATFISQAG Trigger: CCCTGCTTGGCTGATGAAGGTGGCAACTCCAGGCCAAGAGGGTGAGGCAGTCCTGCTGGTCTCTAAGGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CAA 72 bp | AGACCAGCAGGACTGCCTCACCCTCTTGGCCTGGAGTaGCCACCTTCATCAGCCAAGCAGGGGACAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RPAGLPHPLGLE*PPSSAKQGTGK Trigger: TTTGCCTGTCCCCTGCTTGGCTGATGAAGGTGGCAACTCCAGGCCAAGAGGGTGAGGCAGTCCTGCTGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CAA 72 bp | CACAGCCTTAGAGACCAGCAGGACTGCCTCACCCTCTaGGCCTGGAGTTGCCACCTTCATCAGCCAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: HSLRDQQDCLTL*AWSCHLHQPSR Trigger: CCTGCTTGGCTGATGAAGGTGGCAACTCCAGGCCAAGAGGGTGAGGCAGTCCTGCTGGTCTCTAAGGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CAA 90 bp | ATAGAAGCTCACAGCCTTAGAGACCAGCAGGACTGCCTCACCCTCTaGGCCTGGAGTTGCCACCTTCATCAGCCAAGCAGGGGACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: IEAHSLRDQQDCLTL*AWSCHLHQPSRGQA Trigger: TGCCTGTCCCCTGCTTGGCTGATGAAGGTGGCAACTCCAGGCCAAGAGGGTGAGGCAGTCCTGCTGGTCTCTAAGGCTGTGAGCTTCTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | GGTCTGTACCAGTTGGGATGCAAAGTGGTTGGGGTCTaGTTCCACCAGGTGCAGCGTCAGTCCGTAGTCCCG | + |
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Preference number: 6 (lower is better) Translates to: GLYQLGCKVVGV*FHQVQRQSVVP Trigger: CGGGACTACGGACTGACGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | CCACACACCACCTTACTCAGTAGGGGCCTATCACCCTaGATCCGACACACCACTGCACAGATACGCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: PHTTLLSRGLSP*IRHTTAQIRTA Trigger: GGCTGTGCGTATCTGTGCAGTGGTGTGTCGGATTCAGGGTGATAGGCCCCTACTGAGTAAGGTGGTGTGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS TCA 72 bp | GGTCTGTACCAGTTGGGATGCAAAGTGGTTGGGGTCTaGTTCCACCAGGTGCAGCGAGGAAGTCGGTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: GLYQLGCKVVGV*FHQVQRGSRCA Trigger: TGCACACCGACTTCCTCGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS CAA 72 bp | TGGATAAAGGTCTGTACCAGTTGGGATGCAAAGTGGTaGGGGTCTGATTCCACCAGGTGCAGCGTCAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: WIKVCTSWDAKW*GSDSTRCSVSP Trigger: CGGACTGACGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACAGACCTTTATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CAA 72 bp | TGGATAAAGGTCTGTACCAGTTGGGATGCAAAGTGGTaGGGGTCTGATTCCACCAGGTGCAGCGAGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: WIKVCTSWDAKW*GSDSTRCSEEV Trigger: GACTTCCTCGCTGCACCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACAGACCTTTATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237815.2 |
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| CDS CCA 72 bp | TTCTCCTCATCCCTCCGGTGCTCAGTCACATCAAAGTaGATAAAGGTCTGTACCAGTTGGGATGCAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: FSSSLRCSVTSK*IKVCTSWDAKW Trigger: CCACTTTGCATCCCAACTGGTACAGACCTTTATCCACTTTGATGTGACTGAGCACCGGAGGGATGAGGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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| CDS CCA 72 bp | TCAGTCACATCAAAGTGGATAAAGGTCTGTACCAGTTaGGATGCAAAGTGGTTGGGGTCTGATTCCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SVTSKWIKVCTS*DAKWLGSDSTR Trigger: CCTGGTGGAATCAGACCCCAACCACTTTGCATCCCAACTGGTACAGACCTTTATCCACTTTGATGTGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167055.2 |
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