Pregenerated sensors for CARNMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024726Ensembl transcript IDs: ENSMUST00000025632.11, ENSMUST00000235736.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGGTCAGAGCCACTCGGCAGCACCGTTCAGTTCTCTACAAAAAGTaGACACTCGCTCCGGCGGCTCCGGGTGAGGTGGGAGGCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: PVRATRQHRSVLYKK*TLAPAAPGEVGGSP Trigger: GGGGCTGCCTCCCACCTCACCCGGAGCCGCCGGAGCGAGTGTGCACTTTTTGTAGAGAACTGAACGGTGCTGCCGAGTGGCTCTGACCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR CCA 90 bp | GGGACCGAAACTGTCTTTCTGTTCTGTTCACTCGTTCATGCATGCTaGTGTCGCAGACCACAAGAACATAAAGCCGGCTCCGGTGCCCGC | + |
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Preference number: 1 (lower is better) Translates to: GTETVFLFCSLVHAC*CRRPQEHKAGSGAR Trigger: GCGGGCACCGGAGCCGGCTTTATGTTCTTGTGGTCTGCGACACCAGCATGCATGAACGAGTGAACAGAACAGAAAGACAGTTTCGGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR GCA 90 bp | GAAGGGACCGAAACTGTCTTTCTGTTCTGTTCACTCGTTCATGCATaGTGGTGTCGCAGACCACAAGAACATAAAGCCGGCTCCGGTGCC | + |
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Preference number: 1 (lower is better) Translates to: EGTETVFLFCSLVHA*WCRRPQEHKAGSGA Trigger: GGCACCGGAGCCGGCTTTATGTTCTTGTGGTCTGCGACACCAGCATGCATGAACGAGTGAACAGAACAGAAAGACAGTTTCGGTCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR TCA 90 bp | ATCTCACTATGGGAGGCTGTGAGCCACCATGTGGTTGCTGGGATTTaGATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTG | + |
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Preference number: 1 (lower is better) Translates to: ISLWEAVSHHVVAGI*IQYLWKRSQCSYPL Trigger: CAGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCAACCACATGGTGGCTCACAGCCTCCCATAGTGAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR CCA 90 bp | GTCCAAGTGAAGAGGAAACTGAGGAAGCAGTTTCTGCTGGTTCTCTaGAAGGGACCGAAACTGTCTTTCTGTTCTGTTCACTCGTTCATG | + |
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Preference number: 1 (lower is better) Translates to: VQVKRKLRKQFLLVL*KGPKLSFCSVHSFM Trigger: CATGAACGAGTGAACAGAACAGAAAGACAGTTTCGGTCCCTTCCAGAGAACCAGCAGAAACTGCTTCCTCAGTTTCCTCTTCACTTGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR TCA 90 bp | GTGGGGGTCAACATCAGGGAAAAGAATGGGTCGGATCTGATCAGCTaGTCTCCGATTATTGCTAAACTGATGGATCCAGGGATAAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: VGVNIREKNGSDLIS*SPIIAKLMDPGIKF Trigger: AAACTTTATCCCTGGATCCATCAGTTTAGCAATAATCGGAGATCAGCTGATCAGATCCGACCCATTCTTTTCCCTGATGTTGACCCCCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR GCA 90 bp | TGCAATCATTCACAATGGTCAGCAGTATTTCCTGATTATGGTCAATaGATTTCCGGATCTTGTCCAAGTGAAGAGGAAACTGAGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: CNHSQWSAVFPDYGQ*ISGSCPSEEETEEA Trigger: TGCTTCCTCAGTTTCCTCTTCACTTGGACAAGATCCGGAAATGCATTGACCATAATCAGGAAATACTGCTGACCATTGTGAATGATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR GCA 90 bp | TTTGATAATCTCTTTAATGATTGGCTTATAGCAGGCGTCCCTTTCTaGTTTCCCGGTCTCACTCCAGTCTCTTACAAACTGTTTCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: FDNLFNDWLIAGVPF*FPGLTPVSYKLFQC Trigger: ACACTGAAACAGTTTGTAAGAGACTGGAGTGAGACCGGGAAAGCAGAAAGGGACGCCTGCTATAAGCCAATCATTAAAGAGATTATCAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR CCA 90 bp | ATCCCATCTCTCCTTTGGAAAATTTTTGATAATCTCTTTAATGATTaGCTTATAGCAGGCGTCCCTTTCTGCTTTCCCGGTCTCACTCCA | + |
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Preference number: 1 (lower is better) Translates to: IPSLLWKIFDNLFND*LIAGVPFCFPGLTP Trigger: TGGAGTGAGACCGGGAAAGCAGAAAGGGACGCCTGCTATAAGCCAATCATTAAAGAGATTATCAAAAATTTTCCAAAGGAGAGATGGGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR TCA 90 bp | ACACTATTTCTAAATTTTGTTAGGAATAAGAAGGCACCACTGATTTaGGGTTGTGTCCTGTTGTCACCGATAGTTGACTCTGAGTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: TLFLNFVRNKKAPLI*GCVLLSPIVDSELF Trigger: AAACAACTCAGAGTCAACTATCGGTGACAACAGGACACAACCTCAAATCAGTGGTGCCTTCTTATTCCTAACAAAATTTAGAAATAGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR CCA 90 bp | CTCCATATTCTTTATTTTCGAACATATGTATGCAATCATTCACAATaGTCAGCAGTATTTCCTGATTATGGTCAATGCATTTCCGGATCT | + |
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Preference number: 1 (lower is better) Translates to: LHILYFRTYVCNHSQ*SAVFPDYGQCISGS Trigger: AGATCCGGAAATGCATTGACCATAATCAGGAAATACTGCTGACCATTGTGAATGATTGCATACATATGTTCGAAAATAAAGAATATGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR-3UTR CCA 90 bp | CATTTTGCAACTCCGGGATCTCTTCCTCCCTCCACCATCCGGTCAGAGCCACTCCGGCTCCGGGTGAGGTaGGAGGCAGCCCCACGGGAC | + |
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Preference number: 2 (lower is better) Translates to: HFATPGSLPPSTIRSEPLRLRVR*EAAPRD Trigger: GTCCCGTGGGGCTGCCTCCCACCTCACCCGGAGCCG...GAGTGGCTCTGACCGGATGGTGGAGGGAGGAAGAGATCCCGGAGTTGCAAAATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR CAA 90 bp | GGCTGTGAGCCACCATGTGGTTGCTGGGATTTGAATTCAGTACCTTaGGAAAAGAAGTCAGTGCTCTTACCCACTGAGCCATCTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: GCEPPCGCWDLNSVP*EKKSVLLPTEPSHQ Trigger: CTGGTGAGATGGCTCAGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCAACCACATGGTGGCTCACAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAGAAAATACCAGGTCAGAATGCAGAGTGAAGTCCTCACCCAGTAGCCACAATTCCATGAATGGCTaGTGCCTAGGAAGACACAGA | + |
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Preference number: 2 (lower is better) Translates to: GGENTRSECRVKSSPSSHNSMNG*CLGRHR Trigger: TCTGTGTCTTCCTAGGCAGCAGCCATTCATGGAATT...GTGGCTACTGGGTGAGGACTTCACTCTGCATTCTGACCTGGTATTTTCTCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR TCA 90 bp | GGAGGAGAAAATACCAGGTCAGAATGCAGAGTGAAGTCCTCACCCAGTAGCCACTGGCCATCATTACATTaGGGGAAACAACCAAGAACT | + |
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Preference number: 2 (lower is better) Translates to: GGENTRSECRVKSSPSSHWPSLH*GKQPRT Trigger: AGTTCTTGGTTGTTTCCCTCAATGTAATGATGGCCA...GTGGCTACTGGGTGAGGACTTCACTCTGCATTCTGACCTGGTATTTTCTCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTGGCGATGTCAGAACGTGAATTACACACAGAGCCCATACACTCTACAGTTCAAGGCACCACTGATTTaGGGTTGTGTCCTGTTGTCA | + |
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Preference number: 2 (lower is better) Translates to: FWRCQNVNYTQSPYTLQFKAPLI*GCVLLS Trigger: TGACAACAGGACACAACCTCAAATCAGTGGTGCCTT...GAACTGTAGAGTGTATGGGCTCTGTGTGTAATTCACGTTCTGACATCGCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR GCA 90 bp | TTCTGGCGATGTCAGAACGTGAATTACACACAGAGCCCATACACTCTACAGTTCTCCATGAATGGCTGCTaGCTAGGAAGACACAGAACA | + |
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Preference number: 2 (lower is better) Translates to: FWRCQNVNYTQSPYTLQFSMNGC*LGRHRT Trigger: TGTTCTGTGTCTTCCTAGGCAGCAGCCATTCATGGA...GAACTGTAGAGTGTATGGGCTCTGTGTGTAATTCACGTTCTGACATCGCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAGAAAATACCAGGTCAGAATGCAGAGTGAAGTCCTCACCCAGTAGCCACCTAAGAAGTAAAATTTaGTCTGTGGAGCCATGTACT | + |
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Preference number: 2 (lower is better) Translates to: GGENTRSECRVKSSPSSHLRSKI*SVEPCT Trigger: AGTACATGGCTCCACAGAGCAAATTTTACTTCTTAG...GTGGCTACTGGGTGAGGACTTCACTCTGCATTCTGACCTGGTATTTTCTCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR TCA 90 bp | GTCCTATTAAAGCATGGCAACAAGGCAGTTATGTCACCAGTACATATTAAATCCAAGGAAAACTCCCTCTaGCCAGGCCTCTCTAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: VLLKHGNKAVMSPVHIKSKENSL*PGLSRG Trigger: ACCTCTAGAGAGGCCTGGTCAGAGGGAGTTTTCCTT...GGATTTAATATGTACTGGTGACATAACTGCCTTGTTGCCATGCTTTAATAGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR CCA 90 bp | AACTTATCCATGTCAAATGTAGATGCTGGCATAATCTTTCCATTGGCATCTTCTGGAAGCAGTTTCTGCTaGTTCTCTGGAAGGGACCGA | + |
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Preference number: 2 (lower is better) Translates to: NLSMSNVDAGIIFPLASSGSSFC*FSGRDR Trigger: TCGGTCCCTTCCAGAGAACCAGCAGAAACTGCTTCC...AGAAGATGCCAATGGAAAGATTATGCCAGCATCTACATTTGACATGGATAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCACAATGGTCAGCAGTATTTCCTGATTATGGTCAATGCATTTCCGGATCTTTTTCTGCTGGTTCTCTaGAAGGGACCGAAACTGTCT | + |
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Preference number: 2 (lower is better) Translates to: IHNGQQYFLIMVNAFPDLFLLVL*KGPKLS Trigger: AGACAGTTTCGGTCCCTTCCAGAGAACCAGCAGAAA...AAGATCCGGAAATGCATTGACCATAATCAGGAAATACTGCTGACCATTGTGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTATTAAAGCATGGCAACAAGGCAGTTATGTCACCAGTACATATTAAATCCATAAGAAGGCACCACTaGTTTGAGGTTGTGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VLLKHGNKAVMSPVHIKSIRRHH*FEVVSC Trigger: ACAGGACACAACCTCAAATCAGTGGTGCCTTCTTAT...GGATTTAATATGTACTGGTGACATAACTGCCTTGTTGCCATGCTTTAATAGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR CCA 90 bp | ATGTGCTCAAATAACATTCCCACTATGGCCATCATTACATTGAGGGAAACAACCCGTCCTATTAAAGCATaGCAACAAGGCAGTTATGTC | + |
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Preference number: 2 (lower is better) Translates to: MCSNNIPTMAIITLRETTRPIKA*QQGSYV Trigger: GACATAACTGCCTTGTTGCCATGCTTTAATAGGACG...GGTTGTTTCCCTCAATGTAATGATGGCCATAGTGGGAATGTTATTTGAGCACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCTCAAATAACATTCCCACTATGGCCATCATTACATTGAGGGAAACAACCCTCGCAATAGCTTCATaGAACCTGGAGTTTATGTTT | + |
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Preference number: 2 (lower is better) Translates to: MCSNNIPTMAIITLRETTLAIAS*NLEFMF Trigger: AAACATAAACTCCAGGTTTCATGAAGCTATTGCGAG...GGTTGTTTCCCTCAATGTAATGATGGCCATAGTGGGAATGTTATTTGAGCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR GCA 90 bp | GTCCTATTAAAGCATGGCAACAAGGCAGTTATGTCACCAGTACATATTAAATCCGAGGTCACACATTTGTaGAACACTCAGCAAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: VLLKHGNKAVMSPVHIKSEVTHL*NTQQEL Trigger: AAGTTCTTGCTGAGTGTTGCACAAATGTGTGACCTC...GGATTTAATATGTACTGGTGACATAACTGCCTTGTTGCCATGCTTTAATAGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR CAA 90 bp | TACATATTAAATCCATCTAATCCAGATGCCACAGAGGTCACACATTaGTGCAACACTCAGCAAGAACTTCCTTTTCCTGCAGAAGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: YILNPSNPDATEVTH*CNTQQELPFPAEVK Trigger: TTTAACTTCTGCAGGAAAAGGAAGTTCTTGCTGAGTGTTGCACAAATGTGTGACCTCTGTGGCATCTGGATTAGATGGATTTAATATGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTCCTGCAGAAGTTAAAACACCTTCCACCTCTTCTTTCCTAGCTAATGGAAGTTTCAAATTCTATTaGAGACTCGCAATAGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: PFPAEVKTPSTSSFLANGSFKFY*RLAIAS Trigger: TGAAGCTATTGCGAGTCTGCAATAGAATTTGAAACT...TCCATTAGCTAGGAAAGAAGAGGTGGAAGGTGTTTTAACTTCTGCAGGAAAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR CCA 90 bp | TGCTGGGATTTGAATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTTTCCTCGCTGTTCACTaGATGACTTTTAAAATACAT | + |
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Preference number: 2 (lower is better) Translates to: CWDLNSVPLEKKSVLLPTFLAVH*MTFKIH Trigger: ATGTATTTTAAAAGTCATCCAGTGAACAGCGAGGAA...AGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR CCA 90 bp | AAATGGTATAGTAGAGGACCAAGATTTATCCAGATTCCACCTGGCTTGAGTATTGTCAAATGTAGATGCTaGCATAATCTTTCCATTGGC | + |
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Preference number: 2 (lower is better) Translates to: KWYSRGPRFIQIPPGLSIVKCRC*HNLSIG Trigger: GCCAATGGAAAGATTATGCCAGCATCTACATTTGAC...AATACTCAAGCCAGGTGGAATCTGGATAAATCTTGGTCCTCTACTATACCATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR-3UTR GCA 90 bp | ACATATGTATGCAATCATTCACAATGGTCAGCAGTATTTCCTGATTATGGTCAATTTTCCTTACCAAGATaGACATTTTGCAACTCCGGG | + |
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Preference number: 2 (lower is better) Translates to: TYVCNHSQWSAVFPDYGQFSLPR*TFCNSG Trigger: CCCGGAGTTGCAAAATGTGCATCTTGGTAAGGAAAA...TTGACCATAATCAGGAAATACTGCTGACCATTGTGAATGATTGCATACATATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCATTTGCCAGATTTTCAAAATGGTATAGTAGAGGACCAAGATTTATCCAGATACAGTCCCAGGCATTaGATTCTGAGTAAATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VHLPDFQNGIVEDQDLSRYSPRH*ILSKSP Trigger: AGGAGATTTACTCAGAATGCAATGCCTGGGACTGTA...TCTGGATAAATCTTGGTCCTCTACTATACCATTTTGAAAATCTGGCAAATGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR TCA 72 bp | AGCTCCCAGTCCCGTCTTTCTGGCGATGTCAGAACGTaGATTACACACAGAGCCCATACACTCTACAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSQSRLSGDVRT*ITHRAHTLYSS Trigger: GGAACTGTAGAGTGTATGGGCTCTGTGTGTAATTCACGTTCTGACATCGCCAGAAAGACGGGACTGGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR CCA 72 bp | GAGGAAGACTGTGGGGGTCAACATCAGGGAAAAGAATaGGTCGGATCTGATCAGCTGATCTCCGATTATTGC | + |
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Preference number: 3 (lower is better) Translates to: EEDCGGQHQGKE*VGSDQLISDYC Trigger: GCAATAATCGGAGATCAGCTGATCAGATCCGACCCATTCTTTTCCCTGATGTTGACCCCCACAGTCTTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR TCA 72 bp | TGGGAGGCTGTGAGCCACCATGTGGTTGCTGGGATTTaGATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: WEAVSHHVVAGI*IQYLWKRSQCS Trigger: AGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCAACCACATGGTGGCTCACAGCCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR GCA 72 bp | GAAACTGTCTTTCTGTTCTGTTCACTCGTTCATGCATaGTGGTGTCGCAGACCACAAGAACATAAAGCCGGC | + |
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Preference number: 3 (lower is better) Translates to: ETVFLFCSLVHA*WCRRPQEHKAG Trigger: GCCGGCTTTATGTTCTTGTGGTCTGCGACACCAGCATGCATGAACGAGTGAACAGAACAGAAAGACAGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR CCA 72 bp | TTCAAACACATCAGAATAGGGCATCAGATCTCACTATaGGAGGCTGTGAGCCACCATGTGGTTGCTGGGATT | + |
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Preference number: 3 (lower is better) Translates to: FKHIRIGHQISL*EAVSHHVVAGI Trigger: AATCCCAGCAACCACATGGTGGCTCACAGCCTCCCATAGTGAGATCTGATGCCCTATTCTGATGTGTTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR CCA 72 bp | ATAGTCTACATGCCCTATCATGCTCACTATATACTGTaGGCTCAGGAGCCTTCCCGTATAGTCTACATGCCC | + |
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Preference number: 3 (lower is better) Translates to: IVYMPYHAHYIL*AQEPSRIVYMP Trigger: GGGCATGTAGACTATACGGGAAGGCTCCTGAGCCCACAGTATATAGTGAGCATGATAGGGCATGTAGACTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR GCA 72 bp | GATCTCACTATGGGAGGCTGTGAGCCACCATGTGGTTaGTGGGATTTGAATTCAGTACCTTTGGAAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: DLTMGGCEPPCG*WDLNSVPLEKK Trigger: CTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCAACCACATGGTGGCTCACAGCCTCCCATAGTGAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR GCA 72 bp | CTCTTTAATGATTGGCTTATAGCAGGCGTCCCTTTCTaGTTTCCCGGTCTCACTCCAGTCTCTTACAAACTG | + |
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Preference number: 3 (lower is better) Translates to: LFNDWLIAGVPF*FPGLTPVSYKL Trigger: CAGTTTGTAAGAGACTGGAGTGAGACCGGGAAAGCAGAAAGGGACGCCTGCTATAAGCCAATCATTAAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR TCA 72 bp | AACATCAGGGAAAAGAATGGGTCGGATCTGATCAGCTaGTCTCCGATTATTGCTAAACTGATGGATCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: NIREKNGSDLIS*SPIIAKLMDPG Trigger: CCCTGGATCCATCAGTTTAGCAATAATCGGAGATCAGCTGATCAGATCCGACCCATTCTTTTCCCTGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR GCA 72 bp | CCATCTAATCCAGATGCCACAGAGGTCACACATTTGTaGAACACTCAGCAAGAACTTCCTTTTCCTGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: PSNPDATEVTHL*NTQQELPFPAE Trigger: TTCTGCAGGAAAAGGAAGTTCTTGCTGAGTGTTGCACAAATGTGTGACCTCTGTGGCATCTGGATTAGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR CAA 90 bp | TGCTGGGATTTGAATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTACCACTGATTTGAGGTaGTGTCCTGTTGTCACCGAT | + |
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Preference number: 3 (lower is better) Translates to: CWDLNSVPLEKKSVLLPTTTDLR*CPVVTD Trigger: ATCGGTGACAACAGGACACAACCTCAAATCAGTGGT...AGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR CAA 90 bp | ATGTGCTCAAATAACATTCCCACTATGGCCATCATTACATTGAGGGAAACAACCGAAGGCACCACTGATTaGAGGTTGTGTCCTGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: MCSNNIPTMAIITLRETTEGTTD*RLCPVV Trigger: GACAACAGGACACAACCTCAAATCAGTGGTGCCTTC...GGTTGTTTCCCTCAATGTAATGATGGCCATAGTGGGAATGTTATTTGAGCACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR CAA 90 bp | TTCTGGCGATGTCAGAACGTGAATTACACACAGAGCCCATACACTCTACAGTTCTTGAATTCAGTACCTTaGGAAAAGAAGTCAGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: FWRCQNVNYTQSPYTLQFLNSVP*EKKSVL Trigger: GAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAA...GAACTGTAGAGTGTATGGGCTCTGTGTGTAATTCACGTTCTGACATCGCCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR-3UTR CAA 90 bp | ATGTGCTCAAATAACATTCCCACTATGGCCATCATTACATTGAGGGAAACAACCACAGAGGTCACACATTaGTGCAACACTCAGCAAGAA | + |
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Preference number: 3 (lower is better) Translates to: MCSNNIPTMAIITLRETTTEVTH*CNTQQE Trigger: TTCTTGCTGAGTGTTGCACAAATGTGTGACCTCTGT...GGTTGTTTCCCTCAATGTAATGATGGCCATAGTGGGAATGTTATTTGAGCACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR GCA 72 bp | TCACAATGGTCAGCAGTATTTCCTGATTATGGTCAATaGATTTCCGGATCTTGTCCAAGTGAAGAGGAAACT | + |
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Preference number: 3 (lower is better) Translates to: SQWSAVFPDYGQ*ISGSCPSEEET Trigger: AGTTTCCTCTTCACTTGGACAAGATCCGGAAATGCATTGACCATAATCAGGAAATACTGCTGACCATTGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR-3UTR CAA 90 bp | ACATATGTATGCAATCATTCACAATGGTCAGCAGTATTTCCTGATTATGGTCAAACCAAGATGCACATTTaGCAACTCCGGGATCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: TYVCNHSQWSAVFPDYGQTKMHI*QLRDLF Trigger: GAAGAGATCCCGGAGTTGCAAAATGTGCATCTTGGT...TTGACCATAATCAGGAAATACTGCTGACCATTGTGAATGATTGCATACATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR TCA 72 bp | CTAAATTTTGTTAGGAATAAGAAGGCACCACTGATTTaGGGTTGTGTCCTGTTGTCACCGATAGTTGACTCT | + |
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Preference number: 3 (lower is better) Translates to: LNFVRNKKAPLI*GCVLLSPIVDS Trigger: AGAGTCAACTATCGGTGACAACAGGACACAACCTCAAATCAGTGGTGCCTTCTTATTCCTAACAAAATTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR TCA 72 bp | TCCAACTCTTATCTGGGGACAAAATTAGTATTAATCTaGAATTCCATGAATGGCTGCTGCCTAGGAAGACAC | + |
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Preference number: 3 (lower is better) Translates to: SNSYLGTKLVLI*NSMNGCCLGRH Trigger: GTGTCTTCCTAGGCAGCAGCCATTCATGGAATTTCAGATTAATACTAATTTTGTCCCCAGATAAGAGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR TCA 72 bp | GCTCAAATAACATTCCCACTATGGCCATCATTACATTaGGGGAAACAACCAAGAACTGTTGTAGCAATTGGT | + |
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Preference number: 3 (lower is better) Translates to: AQITFPLWPSLH*GKQPRTVVAIG Trigger: ACCAATTGCTACAACAGTTCTTGGTTGTTTCCCTCAATGTAATGATGGCCATAGTGGGAATGTTATTTGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR TCA 72 bp | TGTATGCAATCATTCACAATGGTCAGCAGTATTTCCTaGTTATGGTCAATGCATTTCCGGATCTTGTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CMQSFTMVSSIS*LWSMHFRILSK Trigger: CTTGGACAAGATCCGGAAATGCATTGACCATAATCAGGAAATACTGCTGACCATTGTGAATGATTGCATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR CCA 72 bp | CTCCTTTGGAAAATTTTTGATAATCTCTTTAATGATTaGCTTATAGCAGGCGTCCCTTTCTGCTTTCCCGGT | + |
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Preference number: 3 (lower is better) Translates to: LLWKIFDNLFND*LIAGVPFCFPG Trigger: ACCGGGAAAGCAGAAAGGGACGCCTGCTATAAGCCAATCATTAAAGAGATTATCAAAAATTTTCCAAAGGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| 3UTR-3UTR CAA 90 bp | GTCCTATTAAAGCATGGCAACAAGGCAGTTATGTCACCAGTACATATTAAATCCTCATACATGACATGTTaGATGTTCTCTAAATGCGGC | + |
|
Preference number: 3 (lower is better) Translates to: VLLKHGNKAVMSPVHIKSSYMTC*MFSKCG Trigger: GCCGCATTTAGAGAACATCAAACATGTCATGTATGA...GGATTTAATATGTACTGGTGACATAACTGCCTTGTTGCCATGCTTTAATAGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR GCA 90 bp | GGAGGAGAAAATACCAGGTCAGAATGCAGAGTGAAGTCCTCACCCAGTAGCCACATGACCTTCCAGAAGTaGTCGCGCTCCAGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGENTRSECRVKSSPSSHMTFQK*SRSSRS Trigger: GGAGCGGCTGGAGCGCGAGCACTTCTGGAAGGTCAT...GTGGCTACTGGGTGAGGACTTCACTCTGCATTCTGACCTGGTATTTTCTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR GCA 90 bp | CCTTTTCCTGCAGAAGTTAAAACACCTTCCACCTCTTCTTTCCTAGCTAATGGACGCCCGGCGGAGAACTaGACCTCCACGTCCTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PFPAEVKTPSTSSFLANGRPAEN*TSTSSL Trigger: AAGCGAGGACGTGGAGGTGCAGTTCTCCGCCGGGCG...TCCATTAGCTAGGAAAGAAGAGGTGGAAGGTGTTTTAACTTCTGCAGGAAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | GGAGGAGAAAATACCAGGTCAGAATGCAGAGTGAAGTCCTCACCCAGTAGCCACGGAAGCAGTTTCTGCTaGTTCTCTGGAAGGGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: GGENTRSECRVKSSPSSHGSSFC*FSGRDR Trigger: TCGGTCCCTTCCAGAGAACCAGCAGAAACTGCTTCC...GTGGCTACTGGGTGAGGACTTCACTCTGCATTCTGACCTGGTATTTTCTCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | GGAGGAGAAAATACCAGGTCAGAATGCAGAGTGAAGTCCTCACCCAGTAGCCACCATCAGGGAAAAGAATaGGTCGGATCTGATCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGENTRSECRVKSSPSSHHQGKE*VGSDQL Trigger: CAGCTGATCAGATCCGACCCATTCTTTTCCCTGATG...GTGGCTACTGGGTGAGGACTTCACTCTGCATTCTGACCTGGTATTTTCTCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR GCA 90 bp | ACATATGTATGCAATCATTCACAATGGTCAGCAGTATTTCCTGATTATGGTCAACGCCCGGCGGAGAACTaGACCTCCACGTCCTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TYVCNHSQWSAVFPDYGQRPAEN*TSTSSL Trigger: AAGCGAGGACGTGGAGGTGCAGTTCTCCGCCGGGCG...TTGACCATAATCAGGAAATACTGCTGACCATTGTGAATGATTGCATACATATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| CDS-3UTR GCA 90 bp | ATTCACAATGGTCAGCAGTATTTCCTGATTATGGTCAATGCATTTCCGGATCTTATGACCTTCCAGAAGTaGTCGCGCTCCAGCCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHNGQQYFLIMVNAFPDLMTFQK*SRSSRS Trigger: GGAGCGGCTGGAGCGCGAGCACTTCTGGAAGGTCAT...AAGATCCGGAAATGCATTGACCATAATCAGGAAATACTGCTGACCATTGTGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235736.2 |
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| CDS-3UTR GCA 90 bp | GGAGGAGAAAATACCAGGTCAGAATGCAGAGTGAAGTCCTCACCCAGTAGCCACCTCCTGAAAGTCTCCTaGTGTCATGGAAAAGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGENTRSECRVKSSPSSHLLKVS*CHGKVR Trigger: TCTAACTTTTCCATGACAGCAGGAGACTTTCAGGAG...GTGGCTACTGGGTGAGGACTTCACTCTGCATTCTGACCTGGTATTTTCTCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | GGAGGAGAAAATACCAGGTCAGAATGCAGAGTGAAGTCCTCACCCAGTAGCCACTATCCAGATTCCACCTaGCTTGAGTATTCTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GGENTRSECRVKSSPSSHYPDST*LEYSPY Trigger: ATATGGAGAATACTCAAGCCAGGTGGAATCTGGATA...GTGGCTACTGGGTGAGGACTTCACTCTGCATTCTGACCTGGTATTTTCTCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR CAA 72 bp | CCACCATGTGGTTGCTGGGATTTGAATTCAGTACCTTaGGAAAAGAAGTCAGTGCTCTTACCCACTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PPCGCWDLNSVP*EKKSVLLPTEP Trigger: TGGCTCAGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCAACCACATGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | ATGTGCTCAAATAACATTCCCACTATGGCCATCATTACATTGAGGGAAACAACCCCAGGAGGAAGACTGTaGGGGTCAACATCAGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MCSNNIPTMAIITLRETTPGGRL*GSTSGK Trigger: TTTCCCTGATGTTGACCCCCACAGTCTTCCTCCTGG...GGTTGTTTCCCTCAATGTAATGATGGCCATAGTGGGAATGTTATTTGAGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR GCA 90 bp | TTCTGGCGATGTCAGAACGTGAATTACACACAGAGCCCATACACTCTACAGTTCCCTGATTATGGTCAATaGATTTCCGGATCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FWRCQNVNYTQSPYTLQFPDYGQ*ISGSCP Trigger: TGGACAAGATCCGGAAATGCATTGACCATAATCAGG...GAACTGTAGAGTGTATGGGCTCTGTGTGTAATTCACGTTCTGACATCGCCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | CCTTTTCCTGCAGAAGTTAAAACACCTTCCACCTCTTCTTTCCTAGCTAATGGATTTCTGCTGGTTCTCTaGAAGGGACCGAAACTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFPAEVKTPSTSSFLANGFLLVL*KGPKLS Trigger: AGACAGTTTCGGTCCCTTCCAGAGAACCAGCAGAAA...TCCATTAGCTAGGAAAGAAGAGGTGGAAGGTGTTTTAACTTCTGCAGGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| 3UTR CAA 72 bp | AATCCATCTAATCCAGATGCCACAGAGGTCACACATTaGTGCAACACTCAGCAAGAACTTCCTTTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPSNPDATEVTH*CNTQQELPFPA Trigger: TGCAGGAAAAGGAAGTTCTTGCTGAGTGTTGCACAAATGTGTGACCTCTGTGGCATCTGGATTAGATGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR TCA 90 bp | ATGTGCTCAAATAACATTCCCACTATGGCCATCATTACATTGAGGGAAACAACCAGAATGGGTCGGATCTaGTCAGCTGATCTCCGATTA | + |
|
Preference number: 4 (lower is better) Translates to: MCSNNIPTMAIITLRETTRMGRI*SADLRL Trigger: TAATCGGAGATCAGCTGATCAGATCCGACCCATTCT...GGTTGTTTCCCTCAATGTAATGATGGCCATAGTGGGAATGTTATTTGAGCACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR TCA 90 bp | CCTTTTCCTGCAGAAGTTAAAACACCTTCCACCTCTTCTTTCCTAGCTAATGGACCAGGCATTGCATTCTaGGTAAATCTCCTGAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFPAEVKTPSTSSFLANGPGIAF*VNLLKV Trigger: GACTTTCAGGAGATTTACTCAGAATGCAATGCCTGG...TCCATTAGCTAGGAAAGAAGAGGTGGAAGGTGTTTTAACTTCTGCAGGAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR TCA 90 bp | TGCTGGGATTTGAATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTTCGGATCTGATCAGCTaGTCTCCGATTATTGCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSVPLEKKSVLLPTSDLIS*SPIIAK Trigger: TTTAGCAATAATCGGAGATCAGCTGATCAGATCCGA...AGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR GCA 90 bp | TGCTGGGATTTGAATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTTACAGTCCCAGGCATTaGATTCTGAGTAAATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSVPLEKKSVLLPTYSPRH*ILSKSP Trigger: AGGAGATTTACTCAGAATGCAATGCCTGGGACTGTA...AGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | TTCTGGCGATGTCAGAACGTGAATTACACACAGAGCCCATACACTCTACAGTTCGCCAGATTTTCAAAATaGTATAGTAGAGGACCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FWRCQNVNYTQSPYTLQFARFSK*YSRGPR Trigger: TCTTGGTCCTCTACTATACCATTTTGAAAATCTGGC...GAACTGTAGAGTGTATGGGCTCTGTGTGTAATTCACGTTCTGACATCGCCAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR TCA 90 bp | TGCTGGGATTTGAATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTGTCAGCAGTATTTCCTaGTTATGGTCAATGCATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSVPLEKKSVLLPTVSSIS*LWSMHF Trigger: GAAATGCATTGACCATAATCAGGAAATACTGCTGAC...AGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | CCTTTTCCTGCAGAAGTTAAAACACCTTCCACCTCTTCTTTCCTAGCTAATGGAAATCTCTTTAATGATTaGCTTATAGCAGGCGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PFPAEVKTPSTSSFLANGNLFND*LIAGVP Trigger: AGGGACGCCTGCTATAAGCCAATCATTAAAGAGATT...TCCATTAGCTAGGAAAGAAGAGGTGGAAGGTGTTTTAACTTCTGCAGGAAAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | TGCTGGGATTTGAATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTTGCAATCATTCACAATaGTCAGCAGTATTTCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSVPLEKKSVLLPTCNHSQ*SAVFPD Trigger: ATCAGGAAATACTGCTGACCATTGTGAATGATTGCA...AGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR GCA 90 bp | TGCTGGGATTTGAATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTCATGTCAAATGTAGATaGTGGCATAATCTTTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: CWDLNSVPLEKKSVLLPTHVKCR*WHNLSI Trigger: AATGGAAAGATTATGCCAGCATCTACATTTGACATG...AGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CCA 90 bp | GTCCTATTAAAGCATGGCAACAAGGCAGTTATGTCACCAGTACATATTAAATCCGTCAAATGTAGATGCTaGCATAATCTTTCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLKHGNKAVMSPVHIKSVKCRC*HNLSIG Trigger: GCCAATGGAAAGATTATGCCAGCATCTACATTTGAC...GGATTTAATATGTACTGGTGACATAACTGCCTTGTTGCCATGCTTTAATAGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CAA 90 bp | TGCTGGGATTTGAATTCAGTACCTTTGGAAAAGAAGTCAGTGCTCTTACCCACTCAGATTCCACCTGGCTaGAGTATTCTCCATATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CWDLNSVPLEKKSVLLPTQIPPG*SILHIV Trigger: TACAATATGGAGAATACTCAAGCCAGGTGGAATCTG...AGTGGGTAAGAGCACTGACTTCTTTTCCAAAGGTACTGAATTCAAATCCCAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS-3UTR CAA 90 bp | ATGTGCTCAAATAACATTCCCACTATGGCCATCATTACATTGAGGGAAACAACCGGCATAATCTTTCCATaGGCATCTTCTCCATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: MCSNNIPTMAIITLRETTGIIFP*ASSPYS Trigger: AGAATATGGAGAAGATGCCAATGGAAAGATTATGCC...GGTTGTTTCCCTCAATGTAATGATGGCCATAGTGGGAATGTTATTTGAGCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025632.11 |
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| CDS GCA 72 bp | GCAGGCGCGGCCGAGCCCAAACGCCCGGCGGAGAACTaGACCTCCACGTCCTCGCTTCGCCCGCCGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGAAEPKRPAEN*TSTSSLRPPSW Trigger: CCAGGACGGCGGGCGAAGCGAGGACGTGGAGGTGCAGTTCTCCGCCGGGCGTTTGGGCTCGGCCGCGCCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025632.11 ENSMUST00000235736.2 |
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