Pregenerated sensors for CARF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026017Ensembl transcript IDs: ENSMUST00000027171.12, ENSMUST00000124986.8, ENSMUST00000130075.8, ENSMUST00000132949.3, ENSMUST00000180952.8, ENSMUST00000186107.7, ENSMUST00000187978.7
Found 239 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTaGCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACT | + |
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Preference number: 1 (lower is better) Translates to: GRAPLELTEMHWDYR*LPPGGMRWQKHILT Trigger: AGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR CCA 90 bp | TCTCACTGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTaGGACTATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SHCVGRAPLELTEMH*DYRCLPPGGMRWQK Trigger: TTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACAGTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR CCA 90 bp | TGTAGCTCTGGCTGTCCTGATCTCACTGTGTGGGCCGGGCTCCCCTaGAGCTCACAGAGATGCACTGGGACTATAGGTGCCTGCCACCTG | + |
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Preference number: 1 (lower is better) Translates to: CSSGCPDLTVWAGLP*SSQRCTGTIGACHL Trigger: CAGGTGGCAGGCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACAGTGAGATCAGGACAGCCAGAGCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR TCA 90 bp | CCTTCCGGATTCCCTGCATCCTCAACATCTTCACCTTCCAGCAGCTaGTCCTCTGCAACTGGATTCGGAACTGATTCTGGGAGGTGGCCC | + |
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Preference number: 1 (lower is better) Translates to: PSGFPASSTSSPSSS*SSATGFGTDSGRWP Trigger: GGGCCACCTCCCAGAATCAGTTCCGAATCCAGTTGCAGAGGATCAGCTGCTGGAAGGTGAAGATGTTGAGGATGCAGGGAATCCGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| 3UTR CCA 90 bp | CTCCTAAGACGGCAGGCCCACATGGGTGTGTTACAAGAAAGTGGCTaGAGAGGAGCCAGCAAAGGTTCTTCAACAAGTCTGGCTCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: LLRRQAHMGVLQESG*RGASKGSSTSLAPA Trigger: GGCAGGAGCCAGACTTGTTGAAGAACCTTTGCTGGCTCCTCTCCAGCCACTTTCTTGTAACACACCCATGTGGGCCTGCCGTCTTAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CCA 90 bp | TGGGACATACTGAGACTTCCACATCAAGCGTGTGGCAGGTTTGGCTaGGCTTGGAGACTGGCGAGTACCCCAGACAGTCTGTGTTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: WDILRLPHQACGRFG*AWRLASTPDSLCLL Trigger: CAGCAAACACAGACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CCA 90 bp | GGATTCCGTCATATGGGACATACTGAGACTTCCACATCAAGCGTGTaGCAGGTTTGGCTGGGCTTGGAGACTGGCGAGTACCCCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: GFRHMGHTETSTSSV*QVWLGLETGEYPRQ Trigger: CTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGACGGAATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CCA 90 bp | ATACTGAGACTTCCACATCAAGCGTGTGGCAGGTTTGGCTGGGCTTaGAGACTGGCGAGTACCCCAGACAGTCTGTGTTTGCTGCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: ILRLPHQACGRFGWA*RLASTPDSLCLLLV Trigger: CACAAGCAGCAAACACAGACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR GCA 90 bp | TGGGTAGCACGAGGGATGCTGGTGAGCGAAGGCCGTAATTGCTGGTaGTGTCTTCGAGAACATCTGCTCTTACACCAGTGGGTTTCTCTT | + |
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Preference number: 1 (lower is better) Translates to: WVARGMLVSEGRNCW*CLREHLLLHQWVSL Trigger: AAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACGGCCTTCGCTCACCAGCATCCCTCGTGCTACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR GCA 90 bp | CCTTTTTGGGTAGCACGAGGGATGCTGGTGAGCGAAGGCCGTAATTaGTGGTGCTGTCTTCGAGAACATCTGCTCTTACACCAGTGGGTT | + |
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Preference number: 1 (lower is better) Translates to: PFWVARGMLVSEGRN*WCCLREHLLLHQWV Trigger: AACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACGGCCTTCGCTCACCAGCATCCCTCGTGCTACCCAAAAAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CCA 90 bp | AAGAAAGTGGCTGGAGAGGAGCCAGCAAAGGTTCTTCAACAAGTCTaGCTCCTGCCTTTTTGGGTAGCACGAGGGATGCTGGTGAGCGAA | + |
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Preference number: 1 (lower is better) Translates to: KKVAGEEPAKVLQQV*LLPFWVARGMLVSE Trigger: TTCGCTCACCAGCATCCCTCGTGCTACCCAAAAAGGCAGGAGCCAGACTTGTTGAAGAACCTTTGCTGGCTCCTCTCCAGCCACTTTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CCA 90 bp | CATATGGGACATACTGAGACTTCCACATCAAGCGTGTGGCAGGTTTaGCTGGGCTTGGAGACTGGCGAGTACCCCAGACAGTCTGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: HMGHTETSTSSVWQV*LGLETGEYPRQSVF Trigger: AAACACAGACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR TCA 90 bp | TGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTACTTGTTCCTaGTTACACAGTAACCGCTGGGTCCTCTGCTCTTTCTCTCCGCAC | + |
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Preference number: 1 (lower is better) Translates to: WRNEVAETHPHCTCS*LHSNRWVLCSFSPH Trigger: GTGCGGAGAGAAAGAGCAGAGGACCCAGCGGTTACTGTGTAATCAGGAACAAGTACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR CCA 90 bp | TTTTGGGTAGCACGAGGGATGCTGGTGAGCGAAGGCCGTAATTGCTaGTGCTGTCTTCGAGAACATCTGCTCTTACACCAGTGGGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: FWVARGMLVSEGRNC*CCLREHLLLHQWVS Trigger: AGAAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACGGCCTTCGCTCACCAGCATCCCTCGTGCTACCCAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR TCA 90 bp | CGACTTCCTGCATTGACAAATGGGATTCCGTCATATGGGACATACTaGGACTTCCACATCAAGCGTGTGGCAGGTTTGGCTGGGCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: RLPALTNGIPSYGTY*DFHIKRVAGLAGLG Trigger: TCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGACGGAATCCCATTTGTCAATGCAGGAAGTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR TCA 90 bp | TTCCTTACTGCATACACTTGTCCTACTCCCTGTGACACTAGTTCCTaGATCTTATGCGCTACTTGCGGGTGGAGACGAGAGGGCAACGCA | + |
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Preference number: 1 (lower is better) Translates to: FLTAYTCPTPCDTSS*ILCATCGWRREGNA Trigger: TGCGTTGCCCTCTCGTCTCCACCCGCAAGTAGCGCATAAGATTCAGGAACTAGTGTCACAGGGAGTAGGACAAGTGTATGCAGTAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| 3UTR CCA 90 bp | TACCACAGCTCGACTTCCTGCATTGACAAATGGGATTCCGTCATATaGGACATACTGAGACTTCCACATCAAGCGTGTGGCAGGTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: YHSSTSCIDKWDSVI*DILRLPHQACGRFG Trigger: GCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGACGGAATCCCATTTGTCAATGCAGGAAGTCGAGCTGTGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CCA 90 bp | GCATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATaGCTATCTACTGATACCAAAGCTTGTGAGCCATCAGGAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: AFPTVSTRPGGLEDA*LSTDTKACEPSGEE Trigger: CTCCTCTCCTGATGGCTCACAAGCTTTGGTATCAGTAGATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130075.8 ENSMUST00000132949.3 ENSMUST00000186107.7 |
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| 3UTR GCA 90 bp | TACATCTCCCAACAGAGTCCTATTTACACTTCCTTCCGGATTCCCTaGATCCTCAACATCTTCACCTTCCAGCAGCTGATCCTCTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: YISQQSPIYTSFRIP*ILNIFTFQQLILCN Trigger: GTTGCAGAGGATCAGCTGCTGGAAGGTGAAGATGTTGAGGATGCAGGGAATCCGGAAGGAAGTGTAAATAGGACTCTGTTGGGAGATGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| 3UTR GCA 90 bp | CCAGCATCCATCAGGTTCTTCTTCAGCATAGTGAAGGCTTTCTCCTaGTCCAGTCTGATTATCTTCCTGTCAATTTGGGGGTCTGTAGGT | + |
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Preference number: 1 (lower is better) Translates to: PASIRFFFSIVKAFS*SSLIIFLSIWGSVG Trigger: ACCTACAGACCCCCAAATTGACAGGAAGATAATCAGACTGGAGCAGGAGAAAGCCTTCACTATGCTGAAGAAGAACCTGATGGATGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CCA 90 bp | CGAGAACATCTGCTCTTACACCAGTGGGTTTCTCTTCAGAGATATTaGTCATTTGGGAGGAAGCAAGAGTCAGCCAGCTTCATAGAATCC | + |
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Preference number: 1 (lower is better) Translates to: REHLLLHQWVSLQRY*SFGRKQESASFIES Trigger: GGATTCTATGAAGCTGGCTGACTCTTGCTTCCTCCCAAATGACCAATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CCA 90 bp | CGTAATTGCTGGTGCTGTCTTCGAGAACATCTGCTCTTACACCAGTaGGTTTCTCTTCAGAGATATTGGTCATTTGGGAGGAAGCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RNCWCCLREHLLLHQ*VSLQRYWSFGRKQE Trigger: CTCTTGCTTCCTCCCAAATGACCAATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR TCA 90 bp | GTTCCCACTATCTGTCGTCCACTGAAGCGTTGCTGGAATAATCTCTaGGTTATATACCACATCTCCAGTCCTCAAGGATTTCTGTACCTC | + |
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Preference number: 1 (lower is better) Translates to: VPTICRPLKRCWNNL*VIYHISSPQGFLYL Trigger: GAGGTACAGAAATCCTTGAGGACTGGAGATGTGGTATATAACTCAGAGATTATTCCAGCAACGCTTCAGTGGACGACAGATAGTGGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| 3UTR TCA 90 bp | ACTGTTACAGTCTCTCTGAGGATGTTCCCACTATCTGTCGTCCACTaGAGCGTTGCTGGAATAATCTCTGAGTTATATACCACATCTCCA | + |
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Preference number: 1 (lower is better) Translates to: TVTVSLRMFPLSVVH*SVAGIISELYTTSP Trigger: TGGAGATGTGGTATATAACTCAGAGATTATTCCAGCAACGCTTCAGTGGACGACAGATAGTGGGAACATCCTCAGAGAGACTGTAACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| 3UTR CCA 90 bp | CAGACTTTCTTCAACAAGCACTGGACGGCTGTCTATGATCTGTATTaGAACGGTTTGTACATCTCCCAACAGAGTCCTATTTACACTTCC | + |
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Preference number: 1 (lower is better) Translates to: QTFFNKHWTAVYDLY*NGLYISQQSPIYTS Trigger: GGAAGTGTAAATAGGACTCTGTTGGGAGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTGCTTGTTGAAGAAAGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| 3UTR GCA 90 bp | ACATTCACTCTGCATAAGATGTTAAAGCTCTCTAAGTACATTGGCTaGTTACACAGAAAATTACTACCGAGGGTCAAGTCTCCTGTGGTT | + |
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Preference number: 1 (lower is better) Translates to: TFTLHKMLKLSKYIG*LHRKLLPRVKSPVV Trigger: AACCACAGGAGACTTGACCCTCGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTTATGCAGAGTGAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR CCA 90 bp | TTCTTGTTTAACTTGGTTCTTAGACAGACTTTCTTCAACAAGCACTaGACGGCTGTCTATGATCTGTATTGGAACGGTTTGTACATCTCC | + |
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Preference number: 1 (lower is better) Translates to: FLFNLVLRQTFFNKH*TAVYDLYWNGLYIS Trigger: GGAGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTGCTTGTTGAAGAAAGTCTGTCTAAGAACCAAGTTAAACAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| 3UTR GCA 90 bp | ACAAATATAGAATTGGCAACAAATATTGGAGCTTTAAGTCAAAACTaGCCATCATACATTTCTGGTCCAGTGATTGATACACCATCTCAG | + |
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Preference number: 1 (lower is better) Translates to: TNIELATNIGALSQN*PSYISGPVIDTPSQ Trigger: CTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGATGGGCAGTTTTGACTTAAAGCTCCAATATTTGTTGCCAATTCTATATTTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000187978.7 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCAAGCAGGCGGATTTCTaGGTTCCAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: CVGRAPLELTEMHWDYRCKQADF*VPGQPG Trigger: ACCAGGCTGGCCTGGAACTCAGAAATCCGCCTGCTT...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCTTACACAGTAACCGCTaGGTCCTCTGCTCTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: CVGRAPLELTEMHWDYRCLHSNR*VLCSFS Trigger: AGAGAAAGAGCAGAGGACCCAGCGGTTACTGTGTAA...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR-3UTR CCA 90 bp | CCCTGCATCCTCAACATCTTCACCTTCCAGCAGCTGATCCTCTGCAACTGGATTAGCGTGTGGCAGGTTTaGCTGGGCTTGGAGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: PCILNIFTFQQLILCNWISVWQV*LGLETG Trigger: GCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCT...AATCCAGTTGCAGAGGATCAGCTGCTGGAAGGTGAAGATGTTGAGGATGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CAA 90 bp | CATACTGAGACTTCCACATCAAGCGTGTGGCAGGTTTGGCTGGGCTaGGAGACTGGCGAGTACCCCAGACAGTCTGTGTTTGCTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: HTETSTSSVWQVWLG*ETGEYPRQSVFAAC Trigger: ACAAGCAGCAAACACAGACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGTGACACTAGTTCCTGAATCTTATGCGCTACTTGCGGGTGGAGACGAGAGGTCCACATCAAGCGTGTaGCAGGTTTGGCTGGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PVTLVPESYALLAGGDERSTSSV*QVWLGL Trigger: CAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGA...CCTCTCGTCTCCACCCGCAAGTAGCGCATAAGATTCAGGAACTAGTGTCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCTGCAACTGGATTCGGAACTGATTCTGGGAGGTGGCCCGTGGAGGAGGAGGAGATATTGGTCATTTaGGAGGAAGCAAGAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSATGFGTDSGRWPVEEEEILVI*EEARVS Trigger: GCTGACTCTTGCTTCCTCCCAAATGACCAATATCTC...CTCCTCCTCCACGGGCCACCTCCCAGAATCAGTTCCGAATCCAGTTGCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCTCTTTCTCTCCGCACTaGAAATTGACTAGTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: CVGRAPLELTEMHWDYRCSFSPH*KLTSLF Trigger: AAACAAACTAGTCAATTTCCAGTGCGGAGAGAAAGA...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR-3UTR CCA 90 bp | ATCTCCCAACAGAGTCCTATTTACACTTCCTTCCGGATTCCCTGCATCCTCAACTGGCTCCTGCCTTTTTaGGTAGCACGAGGGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: ISQQSPIYTSFRIPCILNWLLPF*VARGML Trigger: CAGCATCCCTCGTGCTACCCAAAAAGGCAGGAGCCA...GTTGAGGATGCAGGGAATCCGGAAGGAAGTGTAAATAGGACTCTGTTGGGAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGACGGCTGTCTATGATCTGTATTGGAACGGTTTGTACATCTCCCAACAGAAGGTTTGGCTGGGCTTaGAGACTGGCGAGTACCCCA | + |
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Preference number: 2 (lower is better) Translates to: TGRLSMICIGTVCTSPNRRFGWA*RLASTP Trigger: TGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCT...TCTGTTGGGAGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCCGCTGCTATAAATACTaGCAACAGATATCTTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: CVGRAPLELTEMHWDYRCRCYKY*QQISLV Trigger: AACTAAAGATATCTGTTGCCAGTATTTATAGCAGCG...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR-3UTR TCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTAACATTTCTGGTCCAGTaGTTGATACACCATCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: YRCLPPGGMRWQKHILTVTFLVQ*LIHHLR Trigger: TCTGAGATGGTGTATCAATCACTGGACCAGAAATGT...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR-3UTR CCA 90 bp | AAGATGTTAAAGCTCTCTAAGTACATTGGCTGCTTACACAGAAAATTACTACCGCCTGATCTCACTGTGTaGGCCGGGCTCCCCTGGAGC | + |
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Preference number: 2 (lower is better) Translates to: KMLKLSKYIGCLHRKLLPPDLTV*AGLPWS Trigger: GCTCCAGGGGAGCCCGGCCCACACAGTGAGATCAGG...CGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR-3UTR TCA 90 bp | GTTATCCACTTCAGCATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGAACAGCAGTCTGTGTCTaGCTTGTTCCCATTTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VIHFSISYSIHKARRTRGTAVCV*LVPILL Trigger: CAGCAAAATGGGAACAAGTCAGACACAGACTGCTGT...TCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAATGCTGAAGTGGATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000130075.8 ENSMUST00000132949.3 ENSMUST00000186107.7 |
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| 3UTR-3UTR TCA 90 bp | AGCATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCTATCACATTTCTGGTCCAGTaGTTGATACACCATCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: SISYSIHKARRTRGCMAITFLVQ*LIHHLR Trigger: TCTGAGATGGTGTATCAATCACTGGACCAGAAATGT...GATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| 3UTR CAA 90 bp | TCGAGAACATCTGCTCTTACACCAGTGGGTTTCTCTTCAGAGATATaGGTCATTTGGGAGGAAGCAAGAGTCAGCCAGCTTCATAGAATC | + |
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Preference number: 2 (lower is better) Translates to: SRTSALTPVGFSSEI*VIWEEARVSQLHRI Trigger: GATTCTATGAAGCTGGCTGACTCTTGCTTCCTCCCAAATGACCAATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR CAA 90 bp | CACAGTAACCGCTGGGTCCTCTGCTCTTTCTCTCCGCACTGGAAATaGACTAGTTTGTTTCTTAACAAGCATTTCTCCTTAGCAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HSNRWVLCSFSPHWK*TSLFLNKHFSLAVQ Trigger: TTGGACTGCTAAGGAGAAATGCTTGTTAAGAAACAAACTAGTCAATTTCCAGTGCGGAGAGAAAGAGCAGAGGACCCAGCGGTTACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
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| 3UTR-3UTR TCA 90 bp | TTGACTCTGACCAAGCAGTACAGAGTGGTTATCCACTTCAGCATTTCCTACAGTCTCGACTTCCTGCATTaGCAAATGGGATTCCGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LTLTKQYRVVIHFSISYSLDFLH*QMGFRH Trigger: ATGACGGAATCCCATTTGTCAATGCAGGAAGTCGAG...ACTGTAGGAAATGCTGAAGTGGATAACCACTCTGTACTGCTTGGTCAGAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
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| 3UTR-3UTR GCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGTGGAGCTCACAGAGATaGACTGGGACTATAGGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: KITTEGQVSCGCLSVISWWSSQR*TGTIGA Trigger: GGCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCA...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCTATCTACTCTGCTCTTACACCAGTaGGTTTCTCTTCAGAGATAT | + |
|
Preference number: 2 (lower is better) Translates to: FPTVSTRPGGLEDAWLSTLLLHQ*VSLQRY Trigger: ATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAG...AGTAGATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGTGGCCTCCTCAGTGCTaGGATTACAGGTGTGTACCA | + |
|
Preference number: 2 (lower is better) Translates to: KITTEGQVSCGCLSVISWWPPQC*DYRCVP Trigger: TGGTACACACCTGTAATCCCAGCACTGAGGAGGCCA...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGCCTGGCGGAATGAGGTaGCAGAAACACATCCTCACT | + |
|
Preference number: 2 (lower is better) Translates to: KITTEGQVSCGCLSVISWPGGMR*QKHILT Trigger: AGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGG...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR CAA 90 bp | TTCAACAAGCACTGGACGGCTGTCTATGATCTGTATTGGAACGGTTaGTACATCTCCCAACAGAGTCCTATTTACACTTCCTTCCGGATT | + |
|
Preference number: 2 (lower is better) Translates to: FNKHWTAVYDLYWNG*YISQQSPIYTSFRI Trigger: AATCCGGAAGGAAGTGTAAATAGGACTCTGTTGGGAGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTGCTTGTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR-3UTR TCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGTGGAGGCCTAGACCATaGAAACTGCAGAGAAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: KITTEGQVSCGCLSVISWWRPRP*KLQRNK Trigger: CTTGTTTCTCTGCAGTTTTCATGGTCTAGGCCTCCA...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR-3UTR GCA 90 bp | CAGTCCAGGAAAGTTTTTGCTTCTGTAGACAGTGTTGGCTCATTGGTTTCTTGTGTCTTCGAGAACATCTaGTCTTACACCAGTGGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: QSRKVFASVDSVGSLVSCVFENI*SYTSGF Trigger: AAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGAC...ACAAGAAACCAATGAGCCAACACTGTCTACAGAAGCAAAAACTTTCCTGGACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTACAGAGTGGTTATCCACTTCAGCATTTCCTACAGTATCCACAAGGCCAGGATCTCTTCAGAGATATTaGTCATTTGGGAGGAAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: STEWLSTSAFPTVSTRPGSLQRY*SFGRKQ Trigger: TTGCTTCCTCCCAAATGACCAATATCTCTGAAGAGA...TCCTGGCCTTGTGGATACTGTAGGAAATGCTGAAGTGGATAACCACTCTGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR CAA 90 bp | AGTGAAGGCTTTCTCCTGCTCCAGTCTGATTATCTTCCTGTCAATTaGGGGGTCTGTAGGTACTCTATATTCAGGAAATTTCTGTACCTT | + |
|
Preference number: 2 (lower is better) Translates to: SEGFLLLQSDYLPVN*GVCRYSIFRKFLYL Trigger: AAGGTACAGAAATTTCCTGAATATAGAGTACCTACAGACCCCCAAATTGACAGGAAGATAATCAGACTGGAGCAGGAGAAAGCCTTCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR CAA 90 bp | GCCTCCTCAGTGCTGGGATTACAGGTGTGTACCACTACATTCAGCTaGCTTATTTCAGGACAGTTACATTTGAAATTTCTACCTAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ASSVLGLQVCTTTFS*LISGQLHLKFLPSQ Trigger: TTGACTAGGTAGAAATTTCAAATGTAACTGTCCTGAAATAAGCAAGCTGAATGTAGTGGTACACACCTGTAATCCCAGCACTGAGGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTACAGTCCAGGAAAGTTTTTGCTTCTGTAGACAGTGTTGGCTCATTGGTTCTGGACGGCTGTCTATaGTCTGTATTGGAACGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: FLQSRKVFASVDSVGSLVLDGCL*SVLERF Trigger: AAACCGTTCCAATACAGATCATAGACAGCCGTCCAG...AACCAATGAGCCAACACTGTCTACAGAAGCAAAAACTTTCCTGGACTGTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGTTAAAGCTCTCTAAGTACATTGGCTGCTTACACAGAAAATTACTACCGCACTGTACTTGTTCCTaGTTACACAGTAACCGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: KMLKLSKYIGCLHRKLLPHCTCS*LHSNRW Trigger: CCAGCGGTTACTGTGTAATCAGGAACAAGTACAGTG...CGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR-3UTR CCA 90 bp | TCAACAAGCACTGGACGGCTGTCTATGATCTGTATTGGAACGGTTTGTACATCTAATGTATATCCTGGCTaGACAAGTAGCTTTATAGAG | + |
|
Preference number: 2 (lower is better) Translates to: STSTGRLSMICIGTVCTSNVYPG*TSSFIE Trigger: CTCTATAAAGCTACTTGTCCAGCCAGGATATACATT...AGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTGCTTGTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGCTCCGCACTGGAAATTaGCTAGTTTGTTTCTTAACA | + |
|
Preference number: 2 (lower is better) Translates to: KITTEGQVSCGCLSVISWLRTGN*LVCFLT Trigger: TGTTAAGAAACAAACTAGTCAATTTCCAGTGCGGAG...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGTTAAAGCTCTCTAAGTACATTGGCTGCTTACACAGAAAATTACTACCGACCTTTAGCCAACACTaGCATGTTGTGACTATACAT | + |
|
Preference number: 2 (lower is better) Translates to: KMLKLSKYIGCLHRKLLPTFSQH*HVVTIH Trigger: ATGTATAGTCACAACATGTCAGTGTTGGCTAAAGGT...CGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGTTAAAGCTCTCTAAGTACATTGGCTGCTTACACAGAAAATTACTACCGGCTTTAAGTCAAAACTaGCCATCATACATTTCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KMLKLSKYIGCLHRKLLPALSQN*PSYISG Trigger: ACCAGAAATGTATGATGGGCAGTTTTGACTTAAAGC...CGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR CCA 72 bp | GTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTaGGACTATAGGTGCCTGCCACCTGGCGGAATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VGRAPLELTEMH*DYRCLPPGGMR Trigger: CCTCATTCCGCCAGGTGGCAGGCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR TCA 72 bp | TTCCAGCAGCTGATCCTCTGCAACTGGATTCGGAACTaGTTCTGGGAGGTGGCCCGTGGAGGAGGAGGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: FQQLILCNWIRN*FWEVARGGGGA Trigger: AGCACCTCCTCCTCCACGGGCCACCTCCCAGAATCAGTTCCGAATCCAGTTGCAGAGGATCAGCTGCTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR CCA 72 bp | CTGAGACTTCCACATCAAGCGTGTGGCAGGTTTGGCTaGGCTTGGAGACTGGCGAGTACCCCAGACAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRLPHQACGRFG*AWRLASTPDSL Trigger: CAGACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR GCA 72 bp | GAACTGATTCTGGGAGGTGGCCCGTGGAGGAGGAGGTaGTGTTGTCTTGGGTTAGGCATGTATCTGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ELILGGGPWRRR*CCLGLGMYLSQ Trigger: CTGGGACAGATACATGCCTAACCCAAGACAACAGCACCTCCTCCTCCACGGGCCACCTCCCAGAATCAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR CCA 72 bp | ATCAAGCGTGTGGCAGGTTTGGCTGGGCTTGGAGACTaGCGAGTACCCCAGACAGTCTGTGTTTGCTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: IKRVAGLAGLGD*RVPQTVCVCCL Trigger: CAAGCAGCAAACACAGACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR CCA 72 bp | CATACTGAGACTTCCACATCAAGCGTGTGGCAGGTTTaGCTGGGCTTGGAGACTGGCGAGTACCCCAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: HTETSTSSVWQV*LGLETGEYPRQ Trigger: CTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR CCA 72 bp | CAACTGGATTCGGAACTGATTCTGGGAGGTGGCCCGTaGAGGAGGAGGTGCTGTTGTCTTGGGTTAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: QLDSELILGGGP*RRRCCCLGLGM Trigger: CATGCCTAACCCAAGACAACAGCACCTCCTCCTCCACGGGCCACCTCCCAGAATCAGTTCCGAATCCAGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR-3UTR CAA 90 bp | CAACTGGATTCGGAACTGATTCTGGGAGGTGGCCCGTGGAGGAGGAGGTGCTGTATCTGTCCCAGGGTTTaGACTCTGACCAAGCAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: QLDSELILGGGPWRRRCCICPRV*TLTKQY Trigger: GTACTGCTTGGTCAGAGTCAAAACCCTGGGACAGAT...ACAGCACCTCCTCCTCCACGGGCCACCTCCCAGAATCAGTTCCGAATCCAGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR GCA 72 bp | CGAGGGATGCTGGTGAGCGAAGGCCGTAATTGCTGGTaGTGTCTTCGAGAACATCTGCTCTTACACCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RGMLVSEGRNCW*CLREHLLLHQW Trigger: CCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACGGCCTTCGCTCACCAGCATCCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR CCA 72 bp | GCACGAGGGATGCTGGTGAGCGAAGGCCGTAATTGCTaGTGCTGTCTTCGAGAACATCTGCTCTTACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARGMLVSEGRNC*CCLREHLLLHQ Trigger: CTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACGGCCTTCGCTCACCAGCATCCCTCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR GCA 72 bp | GTAGCACGAGGGATGCTGGTGAGCGAAGGCCGTAATTaGTGGTGCTGTCTTCGAGAACATCTGCTCTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: VARGMLVSEGRN*WCCLREHLLLH Trigger: GTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACGGCCTTCGCTCACCAGCATCCCTCGTGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR TCA 72 bp | TTCCCTGCATCCTCAACATCTTCACCTTCCAGCAGCTaGTCCTCTGCAACTGGATTCGGAACTGATTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FPASSTSSPSSS*SSATGFGTDSG Trigger: CCCAGAATCAGTTCCGAATCCAGTTGCAGAGGATCAGCTGCTGGAAGGTGAAGATGTTGAGGATGCAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR TCA 72 bp | GAAGAAAGTGGCTCTGGAGACACAGCAGTCTGTGTCTaGCTTGTTCCCATTTTGCTGGGAATCGGTTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: EESGSGDTAVCV*LVPILLGIGSP Trigger: AGGAGAACCGATTCCCAGCAAAATGGGAACAAGTCAGACACAGACTGCTGTGTCTCCAGAGCCACTTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000130075.8 ENSMUST00000132949.3 ENSMUST00000186107.7 |
||
| 3UTR TCA 72 bp | GAGGTGGCAGAAACACATCCTCACTGTACTTGTTCCTaGTTACACAGTAACCGCTGGGTCCTCTGCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EVAETHPHCTCS*LHSNRWVLCSF Trigger: GAAAGAGCAGAGGACCCAGCGGTTACTGTGTAATCAGGAACAAGTACAGTGAGGATGTGTTTCTGCCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR TCA 72 bp | GCATTGACAAATGGGATTCCGTCATATGGGACATACTaGGACTTCCACATCAAGCGTGTGGCAGGTTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALTNGIPSYGTY*DFHIKRVAGLA Trigger: AGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGACGGAATCCCATTTGTCAATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR GCA 72 bp | CAACAGAGTCCTATTTACACTTCCTTCCGGATTCCCTaGATCCTCAACATCTTCACCTTCCAGCAGCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: QQSPIYTSFRIP*ILNIFTFQQLI Trigger: GATCAGCTGCTGGAAGGTGAAGATGTTGAGGATGCAGGGAATCCGGAAGGAAGTGTAAATAGGACTCTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR CCA 72 bp | TCGACTTCCTGCATTGACAAATGGGATTCCGTCATATaGGACATACTGAGACTTCCACATCAAGCGTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: STSCIDKWDSVI*DILRLPHQACG Trigger: GCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGACGGAATCCCATTTGTCAATGCAGGAAGTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR CCA 72 bp | ACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATaGCTATCTACTGATACCAAAGCTTGTGAGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: TVSTRPGGLEDA*LSTDTKACEPS Trigger: TGATGGCTCACAAGCTTTGGTATCAGTAGATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000130075.8 ENSMUST00000132949.3 ENSMUST00000186107.7 |
||
| 3UTR CCA 72 bp | TGGTGCTGTCTTCGAGAACATCTGCTCTTACACCAGTaGGTTTCTCTTCAGAGATATTGGTCATTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WCCLREHLLLHQ*VSLQRYWSFGR Trigger: CCTCCCAAATGACCAATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR CCA 72 bp | CTCCATTACCACAGCTCGACTTCCTGCATTGACAAATaGGATTCCGTCATATGGGACATACTGAGACTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LHYHSSTSCIDK*DSVIWDILRLP Trigger: TGGAAGTCTCAGTATGTCCCATATGACGGAATCCCATTTGTCAATGCAGGAAGTCGAGCTGTGGTAATGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTGGGTTAGGCATGTATCTGTCCCAGGGTTTTGACTCTGACCAAGCAGTATTCTCTTCAGAGATATaGGTCATTTGGGAGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CLGLGMYLSQGFDSDQAVFSSEI*VIWEEA Trigger: TGCTTCCTCCCAAATGACCAATATCTCTGAAGAGAA...TACTGCTTGGTCAGAGTCAAAACCCTGGGACAGATACATGCCTAACCCAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTAACTTGGTTCTTAGACAGACTTTCTTCAACAAGCACTGGACGGCTGTCTGCTCGACTTCCTGCATaGACAAATGGGATTCCGTCA | + |
|
Preference number: 3 (lower is better) Translates to: CLTWFLDRLSSTSTGRLSARLPA*TNGIPS Trigger: TGACGGAATCCCATTTGTCAATGCAGGAAGTCGAGC...AGACAGCCGTCCAGTGCTTGTTGAAGAAAGTCTGTCTAAGAACCAAGTTAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR TCA 72 bp | GTCTCTCTGAGGATGTTCCCACTATCTGTCGTCCACTaGAGCGTTGCTGGAATAATCTCTGAGTTATATACC | + |
|
Preference number: 3 (lower is better) Translates to: VSLRMFPLSVVH*SVAGIISELYT Trigger: GGTATATAACTCAGAGATTATTCCAGCAACGCTTCAGTGGACGACAGATAGTGGGAACATCCTCAGAGAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR GCA 72 bp | AAGGCCGTAATTGCTGGTGCTGTCTTCGAGAACATCTaGTCTTACACCAGTGGGTTTCTCTTCAGAGATATT | + |
|
Preference number: 3 (lower is better) Translates to: KAVIAGAVFENI*SYTSGFLFRDI Trigger: AATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACGGCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR CCA 72 bp | ACACCAGTGGGTTTCTCTTCAGAGATATTGGTCATTTaGGAGGAAGCAAGAGTCAGCCAGCTTCATAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: TPVGFSSEILVI*EEARVSQLHRI Trigger: GATTCTATGAAGCTGGCTGACTCTTGCTTCCTCCCAAATGACCAATATCTCTGAAGAGAAACCCACTGGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTCTGACCAAGCAGTACAGAGTGGTTATCCACTTCAGCATTTCCTACAGTGAAAACCTTTTCTCCTaGGTCCATACTGACACTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LTLTKQYRVVIHFSISYSENLFS*VHTDTP Trigger: TGGAGTGTCAGTATGGACCAAGGAGAAAAGGTTTTC...ACTGTAGGAAATGCTGAAGTGGATAACCACTCTGTACTGCTTGGTCAGAGTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR-3UTR CAA 90 bp | TATTGGAACGGTTTGTACATCTCCCAACAGAGTCCTATTTACACTTCCTTCCGGTATCTTCCTGTCAATTaGGGGGTCTGTAGGTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: YWNGLYISQQSPIYTSFRYLPVN*GVCRYS Trigger: AGAGTACCTACAGACCCCCAAATTGACAGGAAGATA...CCGGAAGGAAGTGTAAATAGGACTCTGTTGGGAGATGTACAAACCGTTCCAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR TCA 72 bp | TGGCGAGTACCCCAGACAGTCTGTGTTTGCTGCTTGTaGAAAGTTAGGACACTTTCTAATTCAGTCTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: WRVPQTVCVCCL*KVRTLSNSVSL Trigger: AAGTGAGACTGAATTAGAAAGTGTCCTAACTTTTCACAAGCAGCAAACACAGACTGTCTGGGGTACTCGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| 3UTR TCA 72 bp | ACAGACTTTCTTCAACAAGCACTGGACGGCTGTCTATaGTCTGTATTGGAACGGTTTGTACATCTCCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: TDFLQQALDGCL*SVLERFVHLPT Trigger: TGTTGGGAGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTGCTTGTTGAAGAAAGTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR CCA 72 bp | TTCAACAAGCACTGGACGGCTGTCTATGATCTGTATTaGAACGGTTTGTACATCTCCCAACAGAGTCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: FNKHWTAVYDLY*NGLYISQQSPI Trigger: AATAGGACTCTGTTGGGAGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTGCTTGTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR TCA 72 bp | ATCTGTCGTCCACTGAAGCGTTGCTGGAATAATCTCTaGGTTATATACCACATCTCCAGTCCTCAAGGATTT | + |
|
Preference number: 3 (lower is better) Translates to: ICRPLKRCWNNL*VIYHISSPQGF Trigger: AAATCCTTGAGGACTGGAGATGTGGTATATAACTCAGAGATTATTCCAGCAACGCTTCAGTGGACGACAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR CCA 72 bp | AACTTGGTTCTTAGACAGACTTTCTTCAACAAGCACTaGACGGCTGTCTATGATCTGTATTGGAACGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: NLVLRQTFFNKH*TAVYDLYWNGL Trigger: CAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTGCTTGTTGAAGAAAGTCTGTCTAAGAACCAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| 3UTR CCA 72 bp | GGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTaGGTATATACTAAGTTTACCTGGAGGCCTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: GQVSCGCLSVIS*VYTKFTWRPRP Trigger: TGGTCTAGGCCTCCAGGTAAACTTAGTATATACCCAGGAAATTACAGATAAACAACCACAGGAGACTTGACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR TCA 72 bp | TCAAAACTGCCCATCATACATTTCTGGTCCAGTGATTaGTACACCATCTCAGACAATCTCCACCTACTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SKLPIIHFWSSD*YTISDNLHLLR Trigger: TCTTAGTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGATGGGCAGTTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000187978.7 |
||
| 3UTR TCA 72 bp | TGGGTATATACTAAGTTTACCTGGAGGCCTAGACCATaGAAACTGCAGAGAAACAAGCCAGGCTATGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: WVYTKFTWRPRP*KLQRNKPGYDY Trigger: ATAATCATAGCCTGGCTTGTTTCTCTGCAGTTTTCATGGTCTAGGCCTCCAGGTAAACTTAGTATATACCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR GCA 72 bp | ATACTAAGTTTACCTGGAGGCCTAGACCATGAAAACTaGAGAGAAACAAGCCAGGCTATGATTATGATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: ILSLPGGLDHEN*RETSQAMIMIF Trigger: GAAAATCATAATCATAGCCTGGCTTGTTTCTCTGCAGTTTTCATGGTCTAGGCCTCCAGGTAAACTTAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR GCA 72 bp | CTGCATAAGATGTTAAAGCTCTCTAAGTACATTGGCTaGTTACACAGAAAATTACTACCGAGGGTCAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHKMLKLSKYIG*LHRKLLPRVKS Trigger: AGACTTGACCCTCGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTTATGCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR-3UTR CAA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGTACACACTGCTTTTATaGTTGGTCTTTTCTGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: KITTEGQVSCGCLSVISWYTLLL*LVFSVL Trigger: CAAGACAGAAAAGACCAACAATAAAAGCAGTGTGTA...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR TCA 72 bp | CTCACAAATGAATCTCCAGAAAAAGAATCTTCTAGGTaGTCCGCTCTTTCTTTCTTAGTAAGGTCTTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LTNESPEKESSR*SALSFLVRSCS Trigger: AGAGCAAGACCTTACTAAGAAAGAAAGAGCGGATCACCTAGAAGATTCTTTTTCTGGAGATTCATTTGTGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR TCA 72 bp | ACACTATCTCAAACCCACATGATTAAGTATATAGCTTaGCAGGATATAAGCAAGATAAAGCACAAGCTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TLSQTHMIKYIA*QDISKIKHKLG Trigger: CCCCAGCTTGTGCTTTATCTTGCTTATATCCTGTCAAGCTATATACTTAATCATGTGGGTTTGAGATAGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR GCA 72 bp | GGTGTTTGGTGGCTCTGTGCTACCATACACATCTATTaGTCTACCTTTCCAAATAAACAGATGATAAATAGT | + |
|
Preference number: 3 (lower is better) Translates to: GVWWLCATIHIY*STFPNKQMINS Trigger: ACTATTTATCATCTGTTTATTTGGAAAGGTAGAGCAATAGATGTGTATGGTAGCACAGAGCCACCAAACACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR GCA 72 bp | GAATTGGCAACAAATATTGGAGCTTTAAGTCAAAACTaGCCATCATACATTTCTGGTCCAGTGATTGATACA | + |
|
Preference number: 3 (lower is better) Translates to: ELATNIGALSQN*PSYISGPVIDT Trigger: TGTATCAATCACTGGACCAGAAATGTATGATGGGCAGTTTTGACTTAAAGCTCCAATATTTGTTGCCAATTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000187978.7 |
||
| 3UTR TCA 72 bp | TTTCAAAAACTGGTACTAAGCACCTTTAGCCAACACTaGCATGTTGTGACTATACATGAGTTTAGAAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: FQKLVLSTFSQH*HVVTIHEFRRQ Trigger: TTGTCTTCTAAACTCATGTATAGTCACAACATGTCAGTGTTGGCTAAAGGTGCTTAGTACCAGTTTTTGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCAGGTTTGGCTGGGCTTaGAGACTGGCGAGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVGRAPLELTEMHWDYRCRFGWA*RLASTP Trigger: TGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCT...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCTGTGGCAGGTTTGGCTaGGCTTGGAGACTGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVGRAPLELTEMHWDYRCCGRFG*AWRLAS Trigger: ACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACA...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCTGGCTCCTGCCTTTTTaGGTAGCACGAGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVGRAPLELTEMHWDYRCWLLPF*VARGML Trigger: CAGCATCCCTCGTGCTACCCAAAAAGGCAGGAGCCA...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR CAA 72 bp | GATTCTGGGAGGTGGCCCGTGGAGGAGGAGGTGCTGTaGTCTTGGGTTAGGCATGTATCTGTCCCAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSGRWPVEEEVL*SWVRHVSVPGF Trigger: AAACCCTGGGACAGATACATGCCTAACCCAAGACAACAGCACCTCCTCCTCCACGGGCCACCTCCCAGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCGTCTTCGAGAACATCTaGTCTTACACCAGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: CVGRAPLELTEMHWDYRCVFENI*SYTSGF Trigger: AAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGAC...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| 3UTR CAA 72 bp | ACTTCCACATCAAGCGTGTGGCAGGTTTGGCTGGGCTaGGAGACTGGCGAGTACCCCAGACAGTCTGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSTSSVWQVWLG*ETGEYPRQSVF Trigger: AAACACAGACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| CDS-3UTR CCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTATCCACATCAAGCGTGTaGCAGGTTTGGCTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YRCLPPGGMRWQKHILTVSTSSV*QVWLGL Trigger: CAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGA...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR GCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCCATCCCTGTCATTTGTaGAGTAGAATTTCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CVGRAPLELTEMHWDYRCHPCHL*SRISQR Trigger: TCTTTGGGAAATTCTACTGCACAAATGACAGGGATG...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | CTGATACCAAAGCTTGTGAGCCATCAGGAGAGGAGAGTCTTGGCTGTAACTTCAGCTGGGCTTGGAGACTaGCGAGTACCCCAGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LIPKLVSHQERRVLAVTSAGLGD*RVPQTV Trigger: GACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGC...TGAAGTTACAGCCAAGACTCTCCTCTCCTGATGGCTCACAAGCTTTGGTATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGGTTTTGACTCTGACCAAGCAGTACAGAGTGGTTATCCACTTCAGCATAGCGTGTGGCAGGTTTaGCTGGGCTTGGAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQGFDSDQAVQSGYPLQHSVWQV*LGLETG Trigger: GCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCT...ATGCTGAAGTGGATAACCACTCTGTACTGCTTGGTCAGAGTCAAAACCCTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR GCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTATCCTTCCGGATTCCCTaGATCCTCAACATCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: YRCLPPGGMRWQKHILTVSFRIP*ILNIFT Trigger: GGTGAAGATGTTGAGGATGCAGGGAATCCGGAAGGA...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | GTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCTATCTACTGATACCAAAAGGTTTGGCTGGGCTTaGAGACTGGCGAGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTRPGGLEDAWLSTDTKRFGWA*RLASTP Trigger: TGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCT...TTTGGTATCAGTAGATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | GGACTAGAGGATGCATGGCTATCTACTGATACCAAAGCTTGTGAGCCATCAGGATGTGGCAGGTTTGGCTaGGCTTGGAGACTGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLEDAWLSTDTKACEPSGCGRFG*AWRLAS Trigger: ACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACA...TCCTGATGGCTCACAAGCTTTGGTATCAGTAGATAGCCATGCATCCTCTAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | AGCATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCTATCTCCACATCAAGCGTGTaGCAGGTTTGGCTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SISYSIHKARRTRGCMAISTSSV*QVWLGL Trigger: CAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGA...GATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAATGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCAATGTATATCCTGGCTaGACAAGTAGCTTTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: CVGRAPLELTEMHWDYRCNVYPG*TSSFIE Trigger: CTCTATAAAGCTACTTGTCCAGCCAGGATATACATT...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | GTGACACTAGTTCCTGAATCTTATGCGCTACTTGCGGGTGGAGACGAGAGGGCAGACACCAGGAGTCTCTaGTTCATGATACTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTLVPESYALLAGGDERADTRSL*FMILMS Trigger: GCTCATCAGTATCATGAATCAGAGACTCCTGGTGTC...TGCCCTCTCGTCTCCACCCGCAAGTAGCGCATAAGATTCAGGAACTAGTGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR TCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTAGACACCAGGAGTCTCTaGTTCATGATACTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRCLPPGGMRWQKHILTVDTRSL*FMILMS Trigger: GCTCATCAGTATCATGAATCAGAGACTCCTGGTGTC...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTAACAGCAGTCTGTGTCTaGCTTGTTCCCATTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: YRCLPPGGMRWQKHILTVTAVCV*LVPILL Trigger: CAGCAAAATGGGAACAAGTCAGACACAGACTGCTGT...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | GCAGTACAGAGTGGTTATCCACTTCAGCATTTCCTACAGTATCCACAAGGCCAGTGGCTCCTGCCTTTTTaGGTAGCACGAGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVQSGYPLQHFLQYPQGQWLLPF*VARGML Trigger: CAGCATCCCTCGTGCTACCCAAAAAGGCAGGAGCCA...CTGGCCTTGTGGATACTGTAGGAAATGCTGAAGTGGATAACCACTCTGTACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTATGTGTTACAAGAAAGTaGCTGGAGAGGAGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YRCLPPGGMRWQKHILTVCVTRK*LERSQQ Trigger: TTGCTGGCTCCTCTCCAGCCACTTTCTTGTAACACA...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAACTGGGAGGTGGCCCGTaGAGGAGGAGGTGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSELGGGP*RRRCCC Trigger: ACAACAGCACCTCCTCCTCCACGGGCCACCTCCCAG...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTATCATATGGGACATACTaGGACTTCCACATCAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: YRCLPPGGMRWQKHILTVSYGTY*DFHIKR Trigger: ACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGA...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | ACTTCAGCATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGGTCAGTCAGTGTCTCTaGCATATCCTCGAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSAFPTVSTRPGGLEDAWVSQCL*HILESL Trigger: CAGGGATTCGAGGATATGCCAGAGACACTGACTGAC...CCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAATGCTGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | TACAGAGTGGTTATCCACTTCAGCATTTCCTACAGTATCCACAAGGCCAGGAGGGACGGCAGGCCCACATaGGTGTGTTACAAGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YRVVIHFSISYSIHKARRDGRPT*VCYKKV Trigger: CACTTTCTTGTAACACACCCATGTGGGCCTGCCGTC...CCTCCTGGCCTTGTGGATACTGTAGGAAATGCTGAAGTGGATAACCACTCTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACAGCGTGTGGCAGGTTTaGCTGGGCTTGGAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYSVWQV*LGLETG Trigger: GCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCT...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAGCGTGTGGCAGGTTTaGCTGGGCTTGGAGACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSESVWQV*LGLETG Trigger: GCCAGTCTCCAAGCCCAGCCAAACCTGCCACACGCT...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTCTGGGAGGTGGCCCGTaGAGGAGGAGGTGCTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLLGGGP*RRRCCC Trigger: ACAACAGCACCTCCTCCTCCACGGGCCACCTCCCAG...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAACTGATTCTGGGAGGTaGCCCGTGGAGGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSETDSGR*PVEEEV Trigger: CACCTCCTCCTCCACGGGCCACCTCCCAGAATCAGT...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | GGTTTGTACATCTCCCAACAGAGTCCTATTTACACTTCCTTCCGGATTCCCTGCCTGAGCCTCTCTTTCTaGCTTCTCACCATCGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GLYISQQSPIYTSFRIPCLSLSF*LLTIVT Trigger: TGTGACGATGGTGAGAAGTCAGAAAGAGAGGCTCAG...GCAGGGAATCCGGAAGGAAGTGTAAATAGGACTCTGTTGGGAGATGTACAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS-3UTR TCA 90 bp | GGCATGTATCTGTCCCAGGGTTTTGACTCTGACCAAGCAGTACAGAGTGGTTATCTGAGCCTCTCTTTCTaGCTTCTCACCATCGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GMYLSQGFDSDQAVQSGYLSLSF*LLTIVT Trigger: TGTGACGATGGTGAGAAGTCAGAAAGAGAGGCTCAG...ATAACCACTCTGTACTGCTTGGTCAGAGTCAAAACCCTGGGACAGATACATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | TGGTTATCCACTTCAGCATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGTCAGTCAGTGTCTCTaGCATATCCTCGAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WLSTSAFPTVSTRPGGLEVSQCL*HILESL Trigger: CAGGGATTCGAGGATATGCCAGAGACACTGACTGAC...CTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAATGCTGAAGTGGATAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCAGGAGGACTAGAGGATGCATGGCTATCTACTGATACCAAAGCTTGTGAGTGTGTTACAAGAAAGTaGCTGGAGAGGAGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPGGLEDAWLSTDTKACECVTRK*LERSQQ Trigger: TTGCTGGCTCCTCTCCAGCCACTTTCTTGTAACACA...CTCACAAGCTTTGGTATCAGTAGATAGCCATGCATCCTCTAGTCCTCCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTGCTGGGCTTGGAGACTaGCGAGTACCCCAGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLAGLGD*RVPQTV Trigger: GACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGC...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGGCTGGGCTTGGAGACTaGCGAGTACCCCAGACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KITTEGQVSCGCLSVISWAGLGD*RVPQTV Trigger: GACTGTCTGGGGTACTCGCCAGTCTCCAAGCCCAGC...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACAGGTTTGGCTGGGCTTaGAGACTGGCGAGTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYRFGWA*RLASTP Trigger: TGGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCT...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACTGTGGCAGGTTTGGCTaGGCTTGGAGACTGGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYCGRFG*AWRLAS Trigger: ACTCGCCAGTCTCCAAGCCCAGCCAAACCTGCCACA...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTAGGACTAGAGGATGCATaGCTATCTACTGATACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRCLPPGGMRWQKHILTVGLEDA*LSTDTK Trigger: TTTGGTATCAGTAGATAGCCATGCATCCTCTAGTCC...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTACTGATTCTGGGAGGTaGCCCGTGGAGGAGGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLTDSGR*PVEEEV Trigger: CACCTCCTCCTCCACGGGCCACCTCCCAGAATCAGT...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTAGTATCTCATCAGGTTTaGACAGTTCTCTTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: YRCLPPGGMRWQKHILTVVSHQV*TVLFPQ Trigger: TTGTGGAAAGAGAACTGTTCAAACCTGATGAGATAC...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR GCA 90 bp | ACTTCAGCATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCCACTGAAGCTTAGCTaGTTCCTTACTGCATACACT | + |
|
Preference number: 4 (lower is better) Translates to: TSAFPTVSTRPGGLEDAWPLKLS*FLTAYT Trigger: AGTGTATGCAGTAAGGAAGCAGCTAAGCTTCAGTGG...CCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAATGCTGAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132949.3 |
||
| CDS-3UTR CCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACTGGCTCCTGCCTTTTTaGGTAGCACGAGGGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYWLLPF*VARGML Trigger: CAGCATCCCTCGTGCTACCCAAAAAGGCAGGAGCCA...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCTATCTACTTTACAAGAAAGTGGCTaGAGAGGAGCCAGCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPTVSTRPGGLEDAWLSTLQESG*RGASKG Trigger: ACCTTTGCTGGCTCCTCTCCAGCCACTTTCTTGTAA...AGTAGATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACTCCACATCAAGCGTGTaGCAGGTTTGGCTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYSTSSV*QVWLGL Trigger: CAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGA...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCTATCTACTTCATATGGGACATACTaGGACTTCCACATCAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FPTVSTRPGGLEDAWLSTSYGTY*DFHIKR Trigger: ACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGA...AGTAGATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR GCA 90 bp | CTGATACCAAAGCTTGTGAGCCATCAGGAGAGGAGAGTCTTGGCTGTAACTTCAGTCTTCGAGAACATCTaGTCTTACACCAGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIPKLVSHQERRVLAVTSVFENI*SYTSGF Trigger: AAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGAC...TGAAGTTACAGCCAAGACTCTCCTCTCCTGATGGCTCACAAGCTTTGGTATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR GCA 90 bp | AGCATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCTATCACTGCACATACCATCTaGATTGACAAATGGGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SISYSIHKARRTRGCMAITAHTI*IDKWDS Trigger: GGAATCCCATTTGTCAATGCAGATGGTATGTGCAGT...GATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAGACGGCAGGCCCACATaGGTGTGTTACAAGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSEDGRPT*VCYKKV Trigger: CACTTTCTTGTAACACACCCATGTGGGCCTGCCGTC...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| 3UTR CAA 72 bp | TCTGCTCTTACACCAGTGGGTTTCTCTTCAGAGATATaGGTCATTTGGGAGGAAGCAAGAGTCAGCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SALTPVGFSSEI*VIWEEARVSQL Trigger: AAGCTGGCTGACTCTTGCTTCCTCCCAAATGACCAATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| CDS-3UTR TCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACCTGAGCCTCTCTTTCTaGCTTCTCACCATCGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYLSLSF*LLTIVT Trigger: TGTGACGATGGTGAGAAGTCAGAAAGAGAGGCTCAG...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027171.12 ENSMUST00000130075.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAACTCCTTGGTCCATACTaGCACTCCATTACCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSELLGPY*HSITTA Trigger: AGCTGTGGTAATGGAGTGTCAGTATGGACCAAGGAG...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | ATTTCCTACAGTATCCACAAGGCCAGGAGGACTAGAGGATGCATGGCTATCTACACATACCATCTGCATTaGCAAATGGGATTCCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISYSIHKARRTRGCMAIYTYHLH*QMGFRH Trigger: ATGACGGAATCCCATTTGTCAATGCAGATGGTATGT...GTAGATAGCCATGCATCCTCTAGTCCTCCTGGCCTTGTGGATACTGTAGGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
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| CDS-3UTR CCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAGTCAGTCAGTGTCTCTaGCATATCCTCGAATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSEVSQCL*HILESL Trigger: CAGGGATTCGAGGATATGCCAGAGACACTGACTGAC...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS-3UTR CCA 90 bp | CAGCAGTCTGTGTCTGACTTGTTCCCATTTTGCTGGGAATCGGTTCTCCTAGTACTGCTCTTACACCAGTaGGTTTCTCTTCAGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QQSVSDLFPFCWESVLLVLLLHQ*VSLQRY Trigger: ATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAG...TACTAGGAGAACCGATTCCCAGCAAAATGGGAACAAGTCAGACACAGACTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
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| CDS-3UTR CCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTGACGGCAGGCCCACATaGGTGTGTTACAAGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLDGRPT*VCYKKV Trigger: CACTTTCTTGTAACACACCCATGTGGGCCTGCCGTC...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| 3UTR CAA 72 bp | CACTGGACGGCTGTCTATGATCTGTATTGGAACGGTTaGTACATCTCCCAACAGAGTCCTATTTACACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HWTAVYDLYWNG*YISQQSPIYTS Trigger: GGAAGTGTAAATAGGACTCTGTTGGGAGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| CDS-3UTR TCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTCTGAGCCTCTCTTTCTaGCTTCTCACCATCGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLLSLSF*LLTIVT Trigger: TGTGACGATGGTGAGAAGTCAGAAAGAGAGGCTCAG...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000027171.12 ENSMUST00000130075.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAACTCGACTTCCTGCATTaGCAAATGGGATTCCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSELDFLH*QMGFRH Trigger: ATGACGGAATCCCATTTGTCAATGCAGGAAGTCGAG...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
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| CDS-3UTR TCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAACTGTTACAGTCTCTCTaGGGATGTTCCCACTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSELLQSL*GCSHYL Trigger: CAGATAGTGGGAACATCCTCAGAGAGACTGTAACAG...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAACAGCAGTCTGTGTCTaGCTTGTTCCCATTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSETAVCV*LVPILL Trigger: CAGCAAAATGGGAACAAGTCAGACACAGACTGCTGT...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACCTGGACGGCTGTCTATaGTCTGTATTGGAACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYLDGCL*SVLERF Trigger: AAACCGTTCCAATACAGATCATAGACAGCCGTCCAG...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
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| CDS-3UTR GCA 90 bp | ACACAGCAGTCTGTGTCTGACTTGTTCCCATTTTGCTGGGAATCGGTTCTCCTACATCCCTGTCATTTGTaGAGTAGAATTTCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQQSVSDLFPFCWESVLLHPCHL*SRISQR Trigger: TCTTTGGGAAATTCTACTGCACAAATGACAGGGATG...TAGGAGAACCGATTCCCAGCAAAATGGGAACAAGTCAGACACAGACTGCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
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| CDS-3UTR GCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACAGGGCTATGTTCATCTaGAAAGGGCTCCTGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYRAMFI*KGLLRY Trigger: ATACCTCAGGAGCCCTTTGCAGATGAACATAGCCCT...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027171.12 ENSMUST00000130075.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS-3UTR GCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTTCCTTCCGGATTCCCTaGATCCTCAACATCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLSFRIP*ILNIFT Trigger: GGTGAAGATGTTGAGGATGCAGGGAATCCGGAAGGA...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
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| CDS-3UTR CCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAATTACAAGAAAGTGGCTaGAGAGGAGCCAGCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSELQESG*RGASKG Trigger: ACCTTTGCTGGCTCCTCTCCAGCCACTTTCTTGTAA...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAATGTGTTACAAGAAAGTaGCTGGAGAGGAGCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSECVTRK*LERSQQ Trigger: TTGCTGGCTCCTCTCCAGCCACTTTCTTGTAACACA...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS-3UTR TCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAATCATATGGGACATACTaGGACTTCCACATCAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSESYGTY*DFHIKR Trigger: ACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGA...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTCTCGACTTCCTGCATTaGCAAATGGGATTCCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLLDFLH*QMGFRH Trigger: ATGACGGAATCCCATTTGTCAATGCAGGAAGTCGAG...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTGACACCAGGAGTCTCTaGTTCATGATACTGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLDTRSL*FMILMS Trigger: GCTCATCAGTATCATGAATCAGAGACTCCTGGTGTC...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTCTGTTACAGTCTCTCTaGGGATGTTCCCACTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLLLQSL*GCSHYL Trigger: CAGATAGTGGGAACATCCTCAGAGAGACTGTAACAG...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGCTGGACGGCTGTCTATaGTCTGTATTGGAACGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KITTEGQVSCGCLSVISWLDGCL*SVLERF Trigger: AAACCGTTCCAATACAGATCATAGACAGCCGTCCAG...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR GCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACGTCTTCGAGAACATCTaGTCTTACACCAGTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYVFENI*SYTSGF Trigger: AAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGAC...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR GCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACGTGAAGGCTTTCTCCTaGTCCAGTCTGATTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYVKAFS*SSLIIF Trigger: GAAGATAATCAGACTGGAGCAGGAGAAAGCCTTCAC...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTTTACAAGAAAGTGGCTaGAGAGGAGCCAGCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLLQESG*RGASKG Trigger: ACCTTTGCTGGCTCCTCTCCAGCCACTTTCTTGTAA...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TTGACTCTGACCAAGCAGTACAGAGTGGTTATCCACTTCAGCATTTCCTACAGTTGTGTTTGCTGCTTGTaGAAAGTTAGGACACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLTKQYRVVIHFSISYSCVCCL*KVRTLS Trigger: AGAAAGTGTCCTAACTTTTCACAAGCAGCAAACACA...ACTGTAGGAAATGCTGAAGTGGATAACCACTCTGTACTGCTTGGTCAGAGTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR TCA 90 bp | AAGATGTTAAAGCTCTCTAAGTACATTGGCTGCTTACACAGAAAATTACTACCGCTCCTTGGTCCATACTaGCACTCCATTACCACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KMLKLSKYIGCLHRKLLPLLGPY*HSITTA Trigger: AGCTGTGGTAATGGAGTGTCAGTATGGACCAAGGAG...CGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACTATTTTGGGTGGAAATaGAGAAAGTGGCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYYFGWK*RKWLWR Trigger: TCTCCAGAGCCACTTTCTTCATTTCCACCCAAAATA...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR GCA 90 bp | TCAACAAGCACTGGACGGCTGTCTATGATCTGTATTGGAACGGTTTGTACATCTCATCCCTGTCATTTGTaGAGTAGAATTTCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: STSTGRLSMICIGTVCTSHPCHL*SRISQR Trigger: TCTTTGGGAAATTCTACTGCACAAATGACAGGGATG...AGATGTACAAACCGTTCCAATACAGATCATAGACAGCCGTCCAGTGCTTGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS-3UTR GCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAATGCTGTGTAGGTAACTaGACATACCATCGAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSECCVGN*TYHRST Trigger: TGTACTTCGATGGTATGTGCAGTTACCTACACAGCA...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACCTGCTCTTACACCAGTaGGTTTCTCTTCAGAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYLLLHQ*VSLQRY Trigger: ATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAG...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACGGACTAGAGGATGCATaGCTATCTACTGATACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYGLEDA*LSTDTK Trigger: TTTGGTATCAGTAGATAGCCATGCATCCTCTAGTCC...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACCCAAGCAGTACAGAGTaGTTATCCACTTCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYPSSTE*LSTSAF Trigger: AAATGCTGAAGTGGATAACCACTCTGTACTGCTTGG...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTTCTTCAGAGATATCTTaGGGGCTATGTTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLSSEIS*GLCSSA Trigger: TGCAGATGAACATAGCCCTCAAGATATCTCTGAAGA...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACTGTGTTTGCTGCTTGTaGAAAGTTAGGACACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYCVCCL*KVRTLS Trigger: AGAAAGTGTCCTAACTTTTCACAAGCAGCAAACACA...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACTGCTGGAATAATCTCTaGGTTATATACCACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SYISGPVIDTPSQTISTYCWNNL*VIYHIS Trigger: GGAGATGTGGTATATAACTCAGAGATTATTCCAGCA...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTTATTTTGGGTGGAAATaGAGAAAGTGGCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLYFGWK*RKWLWR Trigger: TCTCCAGAGCCACTTTCTTCATTTCCACCCAAAATA...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR GCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAACATCCCTGTCATTTGTaGAGTAGAATTTCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSEHPCHL*SRISQR Trigger: TCTTTGGGAAATTCTACTGCACAAATGACAGGGATG...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027171.12 ENSMUST00000130075.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR GCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGTGCTGTGTAGGTAACTaGACATACCATCGAAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KITTEGQVSCGCLSVISWCCVGN*TYHRST Trigger: TGTACTTCGATGGTATGTGCAGTTACCTACACAGCA...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAAACCTTTTCTCCTTaGTCCATACTGACACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RQSPPTKKSEGARAVNSEKTFSP*SILTLH Trigger: ATGGAGTGTCAGTATGGACCAAGGAGAAAAGGTTTT...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGCCAAGCAGTACAGAGTaGTTATCCACTTCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: KITTEGQVSCGCLSVISWPSSTE*LSTSAF Trigger: AAATGCTGAAGTGGATAACCACTCTGTACTGCTTGG...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTGTATCTCATCAGGTTTaGACAGTTCTCTTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLVSHQV*TVLFPQ Trigger: TTGTGGAAAGAGAACTGTTCAAACCTGATGAGATAC...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTTGCTGGAATAATCTCTaGGTTATATACCACATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLCWNNL*VIYHIS Trigger: GGAGATGTGGTATATAACTCAGAGATTATTCCAGCA...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR GCA 90 bp | AAGATGTTAAAGCTCTCTAAGTACATTGGCTGCTTACACAGAAAATTACTACCGGTGAAGGCTTTCTCCTaGTCCAGTCTGATTATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMLKLSKYIGCLHRKLLPVKAFS*SSLIIF Trigger: GAAGATAATCAGACTGGAGCAGGAGAAAGCCTTCAC...CGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTAAAACCTTTTCTCCTTaGTCCATACTGACACTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLKTFSP*SILTLH Trigger: ATGGAGTGTCAGTATGGACCAAGGAGAAAAGGTTTT...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| 3UTR CAA 72 bp | TTTCTCCTGCTCCAGTCTGATTATCTTCCTGTCAATTaGGGGGTCTGTAGGTACTCTATATTCAGGAAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLLQSDYLPVN*GVCRYSIFRKF Trigger: AAATTTCCTGAATATAGAGTACCTACAGACCCCCAAATTGACAGGAAGATAATCAGACTGGAGCAGGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130075.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTAATGTATATCCTGGCTaGACAAGTAGCTTTATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPTKKSEGARAVNSEKLNVYPG*TSSFIE Trigger: CTCTATAAAGCTACTTGTCCAGCCAGGATATACATT...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR TCA 90 bp | AAGATGTTAAAGCTCTCTAAGTACATTGGCTGCTTACACAGAAAATTACTACCGTGTGTTTGCTGCTTGTaGAAAGTTAGGACACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KMLKLSKYIGCLHRKLLPCVCCL*KVRTLS Trigger: AGAAAGTGTCCTAACTTTTCACAAGCAGCAAACACA...CGGTAGTAATTTTCTGTGTAAGCAGCCAATGTACTTAGAGAGCTTTAACATCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCTATCTTCCTGTCAATTaGGGGGTCTGTAGGTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: CVGRAPLELTEMHWDYRCYLPVN*GVCRYS Trigger: AGAGTACCTACAGACCCCCAAATTGACAGGAAGATA...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS TCA 90 bp | AAGGAAGGATCCCCAGAGTCCATACAGGTCCGATGCTCGAATCCCTaGGCCTCTCTTTCTGACTTCTCACCATCGTCACAGTTGCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEGSPESIQVRCSNP*ASLSDFSPSSQLPA Trigger: AGCGGGCAACTGTGACGATGGTGAGAAGTCAGAAAGAGAGGCTCAGGGATTCGAGCATCGGACCTGTATGGACTCTGGGGATCCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180952.8 ENSMUST00000187978.7 |
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| CDS-3UTR CAA 90 bp | TGTGTGGGCCGGGCTCCCCTGGAGCTCACAGAGATGCACTGGGACTATAGGTGCGACAGTGTTGGCTCATaGGTTTCTTGTTTAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: CVGRAPLELTEMHWDYRCDSVGS*VSCLTW Trigger: CCAAGTTAAACAAGAAACCAATGAGCCAACACTGTC...GCACCTATAGTCCCAGTGCATCTCTGTGAGCTCCAGGGGAGCCCGGCCCACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTACTGAGGTATGGCCACTaGCTCCATCCCTGTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: YRCLPPGGMRWQKHILTVLRYGH*LHPCHL Trigger: CAAATGACAGGGATGGAGCAAGTGGCCATACCTCAG...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TATAGGTGCCTGCCACCTGGCGGAATGAGGTGGCAGAAACACATCCTCACTGTAGCTCGACTTCCTGCATaGACAAATGGGATTCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: YRCLPPGGMRWQKHILTVARLPA*TNGIPS Trigger: TGACGGAATCCCATTTGTCAATGCAGGAAGTCGAGC...TACAGTGAGGATGTGTTTCTGCCACCTCATTCCGCCAGGTGGCAGGCACCTATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTCAGGTTTGGCTGGGCTaGGAGACTGGCGAGTACCCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPTKKSEGARAVNSEKLQVWLG*ETGEYP Trigger: GGGGTACTCGCCAGTCTCCAAGCCCAGCCAAACCTG...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027171.12 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS TCA 90 bp | ATACCATCTGCATTGACAAATGGGATTCCGTCATATGGGACATACTaGGACTTCCACATCAAGCGTGTGGCAGGTTTGGCTGGGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IPSALTNGIPSYGTY*DFHIKRVAGLAGLG Trigger: TCCAAGCCCAGCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGACGGAATCCCATTTGTCAATGCAGATGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
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| CDS GCA 90 bp | CTCTCTGAGGATGTTCCCACTATCTGTCGTCCACTGAAGCTTAGCTaGTTCCTTACTGCATACACTTGTCCTACTCCCTGTGACACTAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSEDVPTICRPLKLS*FLTAYTCPTPCDTS Trigger: ACTAGTGTCACAGGGAGTAGGACAAGTGTATGCAGTAAGGAAGCAGCTAAGCTTCAGTGGACGACAGATAGTGGGAACATCCTCAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132949.3 |
||
| CDS-3UTR CAA 90 bp | AGGGTTTTGACTCTGACCAAGCAGTACAGAGTGGTTATCCACTTCAGCATTTCCCTGAGGTATGGCCACTaGCTCCATCCCTGTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: RVLTLTKQYRVVIHFSISLRYGH*LHPCHL Trigger: CAAATGACAGGGATGGAGCAAGTGGCCATACCTCAG...GGAAATGCTGAAGTGGATAACCACTCTGTACTGCTTGGTCAGAGTCAAAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS CCA 90 bp | GTAACTGCACATACCATCTGCATTGACAAATGGGATTCCGTCATATaGGACATACTGAGACTTCCACATCAAGCGTGTGGCAGGTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VTAHTICIDKWDSVI*DILRLPHQACGRFG Trigger: GCCAAACCTGCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGACGGAATCCCATTTGTCAATGCAGATGGTATGTGCAGTTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
||
| CDS-3UTR CAA 90 bp | AATATTTTGGGTGGAAATGAAGAAAGTGGCTCTGGAGACACAGCAGTCTGTGTCCTGAGGTATGGCCACTaGCTCCATCCCTGTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: NILGGNEESGSGDTAVCVLRYGH*LHPCHL Trigger: CAAATGACAGGGATGGAGCAAGTGGCCATACCTCAG...GACACAGACTGCTGTGTCTCCAGAGCCACTTTCTTCATTTCCACCCAAAATATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130075.8 ENSMUST00000186107.7 |
||
| CDS-3UTR CAA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACCTGAGGTATGGCCACTaGCTCCATCCCTGTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SYISGPVIDTPSQTISTYLRYGH*LHPCHL Trigger: CAAATGACAGGGATGGAGCAAGTGGCCATACCTCAG...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027171.12 ENSMUST00000130075.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGGGTAGGGGGATCATTTaGCCCAAAGGAAGGATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KITTEGQVSCGCLSVISWGRGII*PKGRIP Trigger: GGGGATCCTTCCTTTGGGCAAAATGATCCCCCTACC...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS CCA 90 bp | CGTAATTGCTGGTGCTGTCTTCGAGAACATCTGCTCTTACACCAGTaGGTTTCTCTTCAGAGATATCTTGAGGGCTATGTTCATCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RNCWCCLREHLLLHQ*VSLQRYLEGYVHLQ Trigger: TTGCAGATGAACATAGCCCTCAAGATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027171.12 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAGCTCGACTTCCTGCATaGACAAATGGGATTCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQSPPTKKSEGARAVNSEARLPA*TNGIPS Trigger: TGACGGAATCCCATTTGTCAATGCAGGAAGTCGAGC...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACCAGGAGAGGAGAGTCTaGGCTGTAACTTCAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SYISGPVIDTPSQTISTYQERRV*AVTSKP Trigger: AGGCTTTGAAGTTACAGCCAAGACTCTCCTCTCCTG...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAACAGTCTGTGTCTGACTaGTTCCCATTTTGCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RQSPPTKKSEGARAVNSEQSVSD*FPFCWE Trigger: TTCCCAGCAAAATGGGAACAAGTCAGACACAGACTG...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACCAGTCTGTGTCTGACTaGTTCCCATTTTGCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SYISGPVIDTPSQTISTYQSVSD*FPFCWE Trigger: TTCCCAGCAAAATGGGAACAAGTCAGACACAGACTG...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTCAGGAGAGGAGAGTCTaGGCTGTAACTTCAAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPTKKSEGARAVNSEKLQERRV*AVTSKP Trigger: AGGCTTTGAAGTTACAGCCAAGACTCTCCTCTCCTG...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTATCTGTCCCAGGGTTTaGACTCTGACCAAGCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SPPTKKSEGARAVNSEKLICPRV*TLTKQY Trigger: GTACTGCTTGGTCAGAGTCAAAACCCTGGGACAGAT...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | AAAATTACTACCGAGGGTCAAGTCTCCTGTGGTTGTTTATCTGTAATTTCCTGGATCTGTCCCAGGGTTTaGACTCTGACCAAGCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KITTEGQVSCGCLSVISWICPRV*TLTKQY Trigger: GTACTGCTTGGTCAGAGTCAAAACCCTGGGACAGAT...CCAGGAAATTACAGATAAACAACCACAGGAGACTTGACCCTCGGTAGTAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | AGACAATCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAGAAAACCTTTTCTCCTaGGTCCATACTGACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RQSPPTKKSEGARAVNSEENLFS*VHTDTP Trigger: TGGAGTGTCAGTATGGACCAAGGAGAAAAGGTTTTC...TTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGATTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACTATCTTCCTGTCAATTaGGGGGTCTGTAGGTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SYISGPVIDTPSQTISTYYLPVN*GVCRYS Trigger: AGAGTACCTACAGACCCCCAAATTGACAGGAAGATA...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTGAAAACCTTTTCTCCTaGGTCCATACTGACACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPPTKKSEGARAVNSEKLENLFS*VHTDTP Trigger: TGGAGTGTCAGTATGGACCAAGGAGAAAAGGTTTTC...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
||
| CDS-3UTR CAA 90 bp | TCTCCACCTACTAAGAAATCAGAAGGGGCCAGAGCTGTAAATTCTGAAAAACTTCTGTATTGGAACGGTTaGTACATCTCCCAACAGAGT | + |
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Preference number: 5 (lower is better) Translates to: SPPTKKSEGARAVNSEKLLYWNG*YISQQS Trigger: ACTCTGTTGGGAGATGTACAAACCGTTCCAATACAG...AAGTTTTTCAGAATTTACAGCTCTGGCCCCTTCTGATTTCTTAGTAGGTGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
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| CDS-3UTR CAA 90 bp | TCATACATTTCTGGTCCAGTGATTGATACACCATCTCAGACAATCTCCACCTACGACAGTGTTGGCTCATaGGTTTCTTGTTTAACTTGG | + |
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Preference number: 5 (lower is better) Translates to: SYISGPVIDTPSQTISTYDSVGS*VSCLTW Trigger: CCAAGTTAAACAAGAAACCAATGAGCCAACACTGTC...GTAGGTGGAGATTGTCTGAGATGGTGTATCAATCACTGGACCAGAAATGTATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027171.12 ENSMUST00000187978.7 |
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| CDS CAA 90 bp | TTGAGGGCTATGTTCATCTGCAAAGGGCTCCTGAGGTATGGCCACTaGCTCCATCCCTGTCATTTGTGCAGTAGAATTTCCCAAAGACTG | + |
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Preference number: 6 (lower is better) Translates to: LRAMFICKGLLRYGH*LHPCHLCSRISQRL Trigger: CAGTCTTTGGGAAATTCTACTGCACAAATGACAGGGATGGAGCAAGTGGCCATACCTCAGGAGCCCTTTGCAGATGAACATAGCCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000130075.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS CAA 90 bp | GAGAACATCTGCTCTTACACCAGTGGGTTTCTCTTCAGAGATATCTaGAGGGCTATGTTCATCTGCAAAGGGCTCCTGAGGTATGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ENICSYTSGFLFRDI*RAMFICKGLLRYGH Trigger: GTGGCCATACCTCAGGAGCCCTTTGCAGATGAACATAGCCCTCAAGATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS GCA 72 bp | GATGTTCCCACTATCTGTCGTCCACTGAAGCTTAGCTaGTTCCTTACTGCATACACTTGTCCTACTCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: DVPTICRPLKLS*FLTAYTCPTPC Trigger: ACAGGGAGTAGGACAAGTGTATGCAGTAAGGAAGCAGCTAAGCTTCAGTGGACGACAGATAGTGGGAACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132949.3 |
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| CDS CAA 72 bp | TGCTCTTACACCAGTGGGTTTCTCTTCAGAGATATCTaGAGGGCTATGTTCATCTGCAAAGGGCTCCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: CSYTSGFLFRDI*RAMFICKGLLR Trigger: CCTCAGGAGCCCTTTGCAGATGAACATAGCCCTCAAGATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS GCA 72 bp | TTTCTCTTCAGAGATATCTTGAGGGCTATGTTCATCTaGAAAGGGCTCCTGAGGTATGGCCACTTGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: FLFRDILRAMFI*KGLLRYGHLLH Trigger: ATGGAGCAAGTGGCCATACCTCAGGAGCCCTTTGCAGATGAACATAGCCCTCAAGATATCTCTGAAGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS GCA 72 bp | AAGGCCGTAATTGCTGGTGCTGTCTTCGAGAACATCTaGTCTTACACCAGTGGGTTTCTCTTCAGAGATATC | + |
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Preference number: 6 (lower is better) Translates to: KAVIAGAVFENI*SYTSGFLFRDI Trigger: GATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCAGCAATTACGGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027171.12 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS CCA 72 bp | CATACCATCTGCATTGACAAATGGGATTCCGTCATATaGGACATACTGAGACTTCCACATCAAGCGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: HTICIDKWDSVI*DILRLPHQACG Trigger: GCCACACGCTTGATGTGGAAGTCTCAGTATGTCCCATATGACGGAATCCCATTTGTCAATGCAGATGGTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186107.7 |
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| CDS CCA 72 bp | TGGTGCTGTCTTCGAGAACATCTGCTCTTACACCAGTaGGTTTCTCTTCAGAGATATCTTGAGGGCTATGTT | + |
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Preference number: 6 (lower is better) Translates to: WCCLREHLLLHQ*VSLQRYLEGYV Trigger: AACATAGCCCTCAAGATATCTCTGAAGAGAAACCCACTGGTGTAAGAGCAGATGTTCTCGAAGACAGCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS GCA 72 bp | CTGAGGTATGGCCACTTGCTCCATCCCTGTCATTTGTaGAGTAGAATTTCCCAAAGACTGAAGATCATATTG | + |
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Preference number: 6 (lower is better) Translates to: LRYGHLLHPCHL*SRISQRLKIIL Trigger: CAATATGATCTTCAGTCTTTGGGAAATTCTACTGCACAAATGACAGGGATGGAGCAAGTGGCCATACCTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000130075.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS CAA 90 bp | AGAATTTCCCAAAGACTGAAGATCATATTGAATAGGCTGCCCATTTaGGTCCAAAAGATGAAATTGCTCTTCATGAAGGGCCTGTGTGTC | + |
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Preference number: 6 (lower is better) Translates to: RISQRLKIILNRLPI*VQKMKLLFMKGLCV Trigger: GACACACAGGCCCTTCATGAAGAGCAATTTCATCTTTTGGACCAAAATGGGCAGCCTATTCAATATGATCTTCAGTCTTTGGGAAATTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000130075.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS CAA 90 bp | CCCTGTCATTTGTGCAGTAGAATTTCCCAAAGACTGAAGATCATATaGAATAGGCTGCCCATTTTGGTCCAAAAGATGAAATTGCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PCHLCSRISQRLKII*NRLPILVQKMKLLF Trigger: GAAGAGCAATTTCATCTTTTGGACCAAAATGGGCAGCCTATTCAATATGATCTTCAGTCTTTGGGAAATTCTACTGCACAAATGACAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000130075.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS CAA 72 bp | CAAAGACTGAAGATCATATTGAATAGGCTGCCCATTTaGGTCCAAAAGATGAAATTGCTCTTCATGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: QRLKIILNRLPI*VQKMKLLFMKG Trigger: GCCCTTCATGAAGAGCAATTTCATCTTTTGGACCAAAATGGGCAGCCTATTCAATATGATCTTCAGTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000130075.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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| CDS CAA 72 bp | TTGTGCAGTAGAATTTCCCAAAGACTGAAGATCATATaGAATAGGCTGCCCATTTTGGTCCAAAAGATGAAA | + |
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Preference number: 6 (lower is better) Translates to: LCSRISQRLKII*NRLPILVQKMK Trigger: TTTCATCTTTTGGACCAAAATGGGCAGCCTATTCAATATGATCTTCAGTCTTTGGGAAATTCTACTGCACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000027171.12 ENSMUST00000124986.8 ENSMUST00000130075.8 ENSMUST00000180952.8 ENSMUST00000186107.7 ENSMUST00000187978.7 |
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