RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CARD19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037960

Ensembl transcript IDs: ENSMUST00000048946.7

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR GCA 90 bp CACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCGGGATCCTGGGCAGGTGGCTGTaGAGGGGCTGGGCATGGATG +
Preference number: 4 (lower is better)
Translates to: HDGQPGDSLVKQQVRPGILGRWL*RGWAWM
Trigger: CATCCATGCCCAGCCCCTGCACAGCCACCTGCCCAG...GATCCCGGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR GCA 90 bp CACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCGGGATCCCGTACGCGCAGGGATaGCTTGGGGTTCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: HDGQPGDSLVKQQVRPGIPYAQG*LGVPEL
Trigger: AAGTTCCGGAACCCCAAGGCATCCCTGCGCGTACGG...GATCCCGGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR CCA 90 bp AGGCCCCACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCCGCGCAGGGATGCCTTaGGGTTCCGGAACTTTTCAG +
Preference number: 4 (lower is better)
Translates to: RPHDGQPGDSLVKQQVRPRAGMP*GSGTFQ
Trigger: CTGAAAAGTTCCGGAACCCCAAGGCATCCCTGCGCG...GGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR CCA 90 bp AGGCCCCACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCCCACGCTGCTGTAGATaGCTCAGGAGGTCACAGAGC +
Preference number: 4 (lower is better)
Translates to: RPHDGQPGDSLVKQQVRPPRCCR*LRRSQS
Trigger: GCTCTGTGACCTCCTGAGCCATCTACAGCAGCGTGG...GGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR CCA 90 bp AGGCCCCACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCCAGCACTTTGGGGTCTaGAGGGCAGCAGTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: RPHDGQPGDSLVKQQVRPQHFGV*RAAVEE
Trigger: CTCCTCTACTGCTGCCCTCCAGACCCCAAAGTGCTG...GGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR TCA 90 bp CACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCGGGATCGTCAATGATGACAGGTaGGAAGGCAAGGACGCGCCG +
Preference number: 4 (lower is better)
Translates to: HDGQPGDSLVKQQVRPGIVNDDR*EGKDAP
Trigger: CGGCGCGTCCTTGCCTTCTCACCTGTCATCATTGAC...GATCCCGGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR GCA 90 bp AGGCCCCACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCTCCTCCGAGGTCATCTaGCAGGAAAGCCAGCAGGTA +
Preference number: 4 (lower is better)
Translates to: RPHDGQPGDSLVKQQVRPSSEVI*QESQQV
Trigger: TACCTGCTGGCTTTCCTGGCAGATGACCTCGGAGGA...GGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTGGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR TCA 90 bp CACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCGGGATCGGTTCAGCTGGAGGATaGTCCTGTCCACTTGTTGCT +
Preference number: 4 (lower is better)
Translates to: HDGQPGDSLVKQQVRPGIGSAGG*SCPLVA
Trigger: AGCAACAAGTGGACAGGATCATCCTCCAGCTGAACC...GATCCCGGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR GCA 90 bp AGGCCCCACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCCCCAGTCCAGCTCTCTaGAATCTGAGTTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: RPHDGQPGDSLVKQQVRPPSPAL*NLSFEE
Trigger: CTCCTCAAAACTCAGATTGCAGAGAGCTGGACTGGG...GGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTGGGGCCT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CCA 90 bp GGAGGGCCAGGCCCGCTGCCAGGCCCAGGCCTGCCAGGAAGCTCATaGGTCCCCTGTCACTCAGCTCACGGCTCTCGATGCCCCAGTCCA +
Preference number: 5 (lower is better)
Translates to: GGPGPLPGPGLPGSS*VPCHSAHGSRCPSP
Trigger: TGGACTGGGGCATCGAGAGCCGTGAGCTGAGTGACAGGGGACCCATGAGCTTCCTGGCAGGCCTGGGCCTGGCAGCGGGCCTGGCCCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS TCA 90 bp GAAAGCCAGCAGGTAGCGGCTGACATGCCGGTCAATGATGACAGGTaGGAAGGCAAGGACGCGCCGGGTTCCGGGCAGCACTTTGGGGTC +
Preference number: 5 (lower is better)
Translates to: ESQQVAADMPVNDDR*EGKDAPGSGQHFGV
Trigger: GACCCCAAAGTGCTGCCCGGAACCCGGCGCGTCCTTGCCTTCTCACCTGTCATCATTGACCGGCATGTCAGCCGCTACCTGCTGGCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR CAA 90 bp AGGCCCCACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCACGCGCAGGGATGCCTaGGGGTTCCGGAACTTTTCA +
Preference number: 5 (lower is better)
Translates to: RPHDGQPGDSLVKQQVRPTRRDA*GFRNFS
Trigger: TGAAAAGTTCCGGAACCCCAAGGCATCCCTGCGCGT...GGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTGGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS GCA 90 bp CCCTGTCACTCAGCTCACGGCTCTCGATGCCCCAGTCCAGCTCTCTaGAATCTGAGTTTTGAGGAGAGTAGCGGCTGGGCAGGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: PCHSAHGSRCPSPAL*NLSFEESSGWAGGC
Trigger: ACAGCCACCTGCCCAGCCGCTACTCTCCTCAAAACTCAGATTGCAGAGAGCTGGACTGGGGCATCGAGAGCCGTGAGCTGAGTGACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CCA 90 bp CCCAGTCCAGCTCTCTGCAATCTGAGTTTTGAGGAGAGTAGCGGCTaGGCAGGTGGCTGTGCAGGGGCTGGGCATGGATGTACAGAGCTC +
Preference number: 5 (lower is better)
Translates to: PSPALCNLSFEESSG*AGGCAGAGHGCTEL
Trigger: GAGCTCTGTACATCCATGCCCAGCCCCTGCACAGCCACCTGCCCAGCCGCTACTCTCCTCAAAACTCAGATTGCAGAGAGCTGGACTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS-3UTR CAA 90 bp CACGATGGGCAGCCAGGGGACTCTTTGGTTAAGCAGCAGGTAAGGCCCGGGATCGATGATCCTGTCCACTaGTTGCTCGCTCAGGCGACC +
Preference number: 5 (lower is better)
Translates to: HDGQPGDSLVKQQVRPGIDDPVH*LLAQAT
Trigger: GGTCGCCTGAGCGAGCAACAAGTGGACAGGATCATC...GATCCCGGGCCTTACCTGCTGCTTAACCAAAGAGTCCCCTGGCTGCCCATCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS GCA 90 bp CCAGGAAGCTCATGGGTCCCCTGTCACTCAGCTCACGGCTCTCGATaGCCCAGTCCAGCTCTCTGCAATCTGAGTTTTGAGGAGAGTAGC +
Preference number: 5 (lower is better)
Translates to: PGSSWVPCHSAHGSR*PSPALCNLSFEESS
Trigger: GCTACTCTCCTCAAAACTCAGATTGCAGAGAGCTGGACTGGGGCATCGAGAGCCGTGAGCTGAGTGACAGGGGACCCATGAGCTTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CCA 90 bp CTTGGGGTTCCGGAACTTTTCAGCCTCCTTGTTGGTAAGGATCTGTaGGTAGTAACGGTTCAGCTGGAGGATGATCCTGTCCACTTGTTG +
Preference number: 5 (lower is better)
Translates to: LGVPELFSLLVGKDL*VVTVQLEDDPVHLL
Trigger: CAACAAGTGGACAGGATCATCCTCCAGCTGAACCGTTACTACCCACAGATCCTTACCAACAAGGAGGCTGAAAAGTTCCGGAACCCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CCA 72 bp AGAAGGCAAGGACGCGCCGGGTTCCGGGCAGCACTTTaGGGTCTGGAGGGCAGCAGTAGAGGAGGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: RRQGRAGFRAAL*GLEGSSRGGGP
Trigger: TGGCCCTCCTCCTCTACTGCTGCCCTCCAGACCCCAAAGTGCTGCCCGGAACCCGGCGCGTCCTTGCCTTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS TCA 72 bp CAGGTAGCGGCTGACATGCCGGTCAATGATGACAGGTaGGAAGGCAAGGACGCGCCGGGTTCCGGGCAGCAC +
Preference number: 6 (lower is better)
Translates to: QVAADMPVNDDR*EGKDAPGSGQH
Trigger: GTGCTGCCCGGAACCCGGCGCGTCCTTGCCTTCTCACCTGTCATCATTGACCGGCATGTCAGCCGCTACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CCA 72 bp GCTCTCTGCAATCTGAGTTTTGAGGAGAGTAGCGGCTaGGCAGGTGGCTGTGCAGGGGCTGGGCATGGATGT +
Preference number: 6 (lower is better)
Translates to: ALCNLSFEESSG*AGGCAGAGHGC
Trigger: ACATCCATGCCCAGCCCCTGCACAGCCACCTGCCCAGCCGCTACTCTCCTCAAAACTCAGATTGCAGAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CAA 90 bp CTGTGGGTAGTAACGGTTCAGCTGGAGGATGATCCTGTCCACTTGTaGCTCGCTCAGGCGACCCTGTCCCGTCAGGAAAGGAGTGTCCTG +
Preference number: 6 (lower is better)
Translates to: LWVVTVQLEDDPVHL*LAQATLSRQERSVL
Trigger: CAGGACACTCCTTTCCTGACGGGACAGGGTCGCCTGAGCGAGCAACAAGTGGACAGGATCATCCTCCAGCTGAACCGTTACTACCCACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS GCA 72 bp TCAGCTCACGGCTCTCGATGCCCCAGTCCAGCTCTCTaGAATCTGAGTTTTGAGGAGAGTAGCGGCTGGGCA +
Preference number: 6 (lower is better)
Translates to: SAHGSRCPSPAL*NLSFEESSGWA
Trigger: TGCCCAGCCGCTACTCTCCTCAAAACTCAGATTGCAGAGAGCTGGACTGGGGCATCGAGAGCCGTGAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CAA 72 bp GTAACGGTTCAGCTGGAGGATGATCCTGTCCACTTGTaGCTCGCTCAGGCGACCCTGTCCCGTCAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: VTVQLEDDPVHL*LAQATLSRQER
Trigger: CCTTTCCTGACGGGACAGGGTCGCCTGAGCGAGCAACAAGTGGACAGGATCATCCTCCAGCTGAACCGTTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CAA 72 bp CTCAGGAGGTCACAGAGCCGTACGCGCAGGGATGCCTaGGGGTTCCGGAACTTTTCAGCCTCCTTGTTGGTA +
Preference number: 6 (lower is better)
Translates to: LRRSQSRTRRDA*GFRNFSASLLV
Trigger: TACCAACAAGGAGGCTGAAAAGTTCCGGAACCCCAAGGCATCCCTGCGCGTACGGCTCTGTGACCTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CAA 90 bp GATCTGTGGGTAGTAACGGTTCAGCTGGAGGATGATCCTGTCCACTaGTTGCTCGCTCAGGCGACCCTGTCCCGTCAGGAAAGGAGTGTC +
Preference number: 6 (lower is better)
Translates to: DLWVVTVQLEDDPVH*LLAQATLSRQERSV
Trigger: GACACTCCTTTCCTGACGGGACAGGGTCGCCTGAGCGAGCAACAAGTGGACAGGATCATCCTCCAGCTGAACCGTTACTACCCACAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CAA 72 bp GTAGTAACGGTTCAGCTGGAGGATGATCCTGTCCACTaGTTGCTCGCTCAGGCGACCCTGTCCCGTCAGGAA +
Preference number: 6 (lower is better)
Translates to: VVTVQLEDDPVH*LLAQATLSRQE
Trigger: TTCCTGACGGGACAGGGTCGCCTGAGCGAGCAACAAGTGGACAGGATCATCCTCCAGCTGAACCGTTACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7
CDS CCA 72 bp CCGGAACTTTTCAGCCTCCTTGTTGGTAAGGATCTGTaGGTAGTAACGGTTCAGCTGGAGGATGATCCTGTC +
Preference number: 6 (lower is better)
Translates to: PELFSLLVGKDL*VVTVQLEDDPV
Trigger: GACAGGATCATCCTCCAGCTGAACCGTTACTACCCACAGATCCTTACCAACAAGGAGGCTGAAAAGTTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048946.7