Pregenerated sensors for CAR9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028463Ensembl transcript IDs: ENSMUST00000030183.10, ENSMUST00000138073.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGAGAAGGAATAAAAGCAAGAATTaGGGGGTGGCGGTGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: VIPAFKRLGQENRGFKRRNKSKN*GVAVVV Trigger: CACTACCACCGCCACCCCGCAATTCTTGCTTTTATT...CCTTCTCTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| 3UTR TCA 72 bp | GTCCTGGCACTAAGAAGGCAGAGGCAATCGGATCTCTaGGTTCAAGGCCAGCCTAGGCTACAGAGTGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: VLALRRQRQSDL*VQGQPRLQSES Trigger: GGACTCACTCTGTAGCCTAGGCTGGCCTTGAACTCAGAGATCCGATTGCCTCTGCCTTCTTAGTGCCAGGAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | CATACCCTCAGTCCTGGCACTAAGAAGGCAGAGGCAATCGGATCTCTGAGTTCAAAGGAGGGCTCCCCCTaGATCCCGGACAGGCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: HTLSPGTKKAEAIGSLSSKEGSP*IPDRPW Trigger: CCAGGGCCTGTCCGGGATGCAGGGGGAGCCCTCCTT...TGAACTCAGAGATCCGATTGCCTCTGCCTTCTTAGTGCCAGGACTGAGGGTATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGGCGGCCAGCACAGGCTaGGGACACCTGGGGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QEKGLERLRSVIERLPSRAASTG*GHLGPE Trigger: CTCTGGCCCCAGGTGTCCCCAGCCTGTGCTGGCCGC...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | TGGTGCATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGCAGGCTGGGGACACCTaGGGCCAGAGTAGGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: WCIPVIPAFKRLGQENRGQAGDT*GQSRVP Trigger: AGGCACCCTACTCTGGCCCCAGGTGTCCCCAGCCTG...CCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAATGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR TCA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGGACAGGCCCTGGGGCTaGGCAGACACTTGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QEKGLERLRSVIERLPSRDRPWG*ADTWSS Trigger: GCTGCTCCAAGTGTCTGCTCAGCCCCAGGGCCTGTC...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR TCA 90 bp | TGGTGCATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGATGTCTACCGGGGACTaGAAGCGGCCAGCACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: WCIPVIPAFKRLGQENRGMSTGD*KRPAQA Trigger: AGCCTGTGCTGGCCGCTTTCAGTCCCCGGTAGACAT...CCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAATGCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGAACTGCCAGGCCTCCTaGGCGGCCCAAGGCTTCATG | + |
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Preference number: 4 (lower is better) Translates to: QEKGLERLRSVIERLPSRNCQAS*AAQGFM Trigger: CATGAAGCCTTGGGCCGCCCAGGAGGCCTGGCAGTT...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGGGACTGGCTCAGGGCTaGTATCCTCTGCAGCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: QEKGLERLRSVIERLPSRGLAQG*YPLQQG Trigger: TCCCTGCTGCAGAGGATAGCAGCCCTGAGCCAGTCC...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | TGGTGCATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGCTTCTGTGCCTGTGCTaGCTCCTCAGCTGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: WCIPVIPAFKRLGQENRGLLCLC*LLSCRR Trigger: CCTCCTACAGCTGAGGAGGCAGCACAGGCACAGAAG...CCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAATGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | GTAAGACCCTGGCTTCAAACTCCATCACCATACATACACAATGCAAGGCCAGTCGTCCAGATGACCCCCTaGCTGCAGGGAGGTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: VRPWLQTPSPYIHNARPVVQMTP*LQGGVV Trigger: GACCACACCTCCCTGCAGCCAGGGGGTCATCTGGAC...GACTGGCCTTGCATTGTGTATGTATGGTGATGGAGTTTGAAGCCAGGGTCTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | GTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGAGAAGGGGGGCCAGAGTAGGGTaGCTCCATAGCTCCAATGAC | + |
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Preference number: 4 (lower is better) Translates to: VIPAFKRLGQENRGFKRRGARVG*LHSSND Trigger: GTCATTGGAGCTATGGAGGCACCCTACTCTGGCCCC...CCTTCTCTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTAC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGAGGGCTGCTATCCTCTaGAGCAGGGAAGGAAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QEKGLERLRSVIERLPSRRAAIL*SREGSL Trigger: GAGGCTTCCTTCCCTGCTGCAGAGGATAGCAGCCCT...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | AGTGGTAGAGCATTTGACTGCAGAATAAAAGCAAGAATTGCGGGGTGGCGGTGGCCACTTCTGTGCCTGTaGTGCCTCCTCAGCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: SGRAFDCRIKARIAGWRWPLLCL*CLLSCR Trigger: CCTACAGCTGAGGAGGCAGCACAGGCACAGAAGTGG...CCACCGCCACCCCGCAATTCTTGCTTTTATTCTGCAGTCAAATGCTCTACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR TCA 90 bp | ATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGCTCATCCTCCCCAGATaGACTGTCTCCCAAGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: IPVIPAFKRLGQENRGFKLILPR*TVSQGG Trigger: CCCTCCTTGGGAGACAGTTCATCTGGGGAGGATGAG...CTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGCGCCCATTCAAGGGTTaGGTGGCTCGGAAGTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: QEKGLERLRSVIERLPSRRPFKG*VARKFS Trigger: ACTGAACTTCCGAGCCACGCAACCCTTGAATGGGCG...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | GTAAGACCCTGGCTTCAAACTCCATCACCATACATACACAATGCAAGGCCAGTCTTGGTCCCACTTCTGTaGCTGTGCTGCCTCCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VRPWLQTPSPYIHNARPVLVPLL*LCCLLS Trigger: GCTGAGGAGGCAGCACAGGCACAGAAGTGGGACCAA...GACTGGCCTTGCATTGTGTATGTATGGTGATGGAGTTTGAAGCCAGGGTCTTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | GTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGAGAAGGGTGCATCCTCTTCACTaGGCAGAACATCCACGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VIPAFKRLGQENRGFKRRVHPLH*AEHPRP Trigger: TGGGCGTGGATGTTCTGCCCAGTGAAGAGGATGCAC...CCTTCTCTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | GTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGAGAAGGCCGTGTGGCCATTGTTaGATAGGCTCAGTTCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: VIPAFKRLGQENRGFKRRPCGHC*IGSVPG Trigger: TCCCGGAACTGAGCCTATCCAACAATGGCCACACGG...CCTTCTCTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGGGCTGCAGGGAGGTGTaGTCAGAGACCCTTCATATC | + |
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Preference number: 4 (lower is better) Translates to: QEKGLERLRSVIERLPSRGCREV*SETLHI Trigger: GATATGAAGGGTCTCTGACCACACCTCCCTGCAGCC...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR TCA 90 bp | ATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGGGAAGGCGATGCTGGTaGCAGCAAAGAGAAGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: IPVIPAFKRLGQENRGFKGRRCW*QQREGQ Trigger: TTGGCCTTCTCTTTGCTGTCACCAGCATCGCCTTCC...CTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGGGAATTCACATGGACTaGCTCAGGGCTGCTATCCTC | + |
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Preference number: 4 (lower is better) Translates to: QEKGLERLRSVIERLPSRGIHMD*LRAAIL Trigger: GAGGATAGCAGCCCTGAGCCAGTCCATGTGAATTCC...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR TCA 90 bp | ATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGGGAAACGGTGACCATTaGCTGTGTGTTCTGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IPVIPAFKRLGQENRGFKGNGDH*LCVLSL Trigger: CAGGCTCAGAACACACAGTCAATGGTCACCGTTTCC...CTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR TCA 90 bp | GTAAGACCCTGGCTTCAAACTCCATCACCATACATACACAATGCAAGGCCAGTCCGGCCCAAGGCTTCATaGAGTTCGGAGAAAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: VRPWLQTPSPYIHNARPVRPKAS*SSEKAV Trigger: TACTGCTTTCTCCGAACTTCATGAAGCCTTGGGCCG...GACTGGCCTTGCATTGTGTATGTATGGTGATGGAGTTTGAAGCCAGGGTCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR TCA 90 bp | GTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGAGAAGGGGATGTCACCAGCAGTaGAGCAGGAATTCACATGGA | + |
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Preference number: 4 (lower is better) Translates to: VIPAFKRLGQENRGFKRRGCHQQ*SRNSHG Trigger: TCCATGTGAATTCCTGCTTCACTGCTGGTGACATCC...CCTTCTCTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | GTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGAGAAGGAGAATTAACTTCAGGTaGATCCTCCCCATCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VIPAFKRLGQENRGFKRRRINFR*ILPIGW Trigger: CCACCCGATGGGGAGGATCCACCTGAAGTTAATTCT...CCTTCTCTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | GTAAGACCCTGGCTTCAAACTCCATCACCATACATACACAATGCAAGGCCAGTCTCTTCTGGGCTCTCCTaGAGAAAGGCAGCCAAAACT | + |
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Preference number: 4 (lower is better) Translates to: VRPWLQTPSPYIHNARPVSSGLS*RKAAKT Trigger: AGTTTTGGCTGCCTTTCTGCAGGAGAGCCCAGAAGA...GACTGGCCTTGCATTGTGTATGTATGGTGATGGAGTTTGAAGCCAGGGTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | GTAAGACCCTGGCTTCAAACTCCATCACCATACATACACAATGCAAGGCCAGTCAGCACTGTTTTCTTCTaGGCTCTCCTGCAGAAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VRPWLQTPSPYIHNARPVSTVFF*ALLQKG Trigger: GCCTTTCTGCAGGAGAGCCCAGAAGAAAACAGTGCT...GACTGGCCTTGCATTGTGTATGTATGGTGATGGAGTTTGAAGCCAGGGTCTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | GTAAGACCCTGGCTTCAAACTCCATCACCATACATACACAATGCAAGGCCAGTCGAAACGGAGAGAGTATaGAGCTGCTTAGCGCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: VRPWLQTPSPYIHNARPVETERV*SCLALS Trigger: ACTGAGCGCTAAGCAGCTCCATACTCTCTCCGTTTC...GACTGGCCTTGCATTGTGTATGTATGGTGATGGAGTTTGAAGCCAGGGTCTTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CCA 90 bp | AGTGGTAGAGCATTTGACTGCAGAATAAAAGCAAGAATTGCGGGGTGGCGGTGGCATTCAAGGGTTGCGTaGCTCGGAAGTTCAGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: SGRAFDCRIKARIAGWRWHSRVA*LGSSVV Trigger: TACAACTGAACTTCCGAGCCACGCAACCCTTGAATG...CCACCGCCACCCCGCAATTCTTGCTTTTATTCTGCAGTCAAATGCTCTACCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR GCA 90 bp | ATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGAGTTTCTGTCATCTCTaGCGGACTGTAGCTAACTCT | + |
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Preference number: 4 (lower is better) Translates to: IPVIPAFKRLGQENRGFKSFCHL*RTVANS Trigger: AGAGTTAGCTACAGTCCGGCAGAGATGACAGAAACT...CTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS TCA 90 bp | TCTCCCAAGGAGGGCTCCCCCTGCATCCCGGACAGGCCCTGGGGCTaGGCAGACACTTGGAGCAGCAGGAACAGCAGCAGCTGTGCAGTA | + |
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Preference number: 5 (lower is better) Translates to: SPKEGSPCIPDRPWG*ADTWSSRNSSSCAV Trigger: TACTGCACAGCTGCTGCTGTTCCTGCTGCTCCAAGTGTCTGCTCAGCCCCAGGGCCTGTCCGGGATGCAGGGGGAGCCCTCCTTGGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS TCA 90 bp | CTCTTCACTGGGCAGAACATCCACGCCCAGCTCATCCTCCCCAGATaGACTGTCTCCCAAGGAGGGCTCCCCCTGCATCCCGGACAGGCC | + |
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Preference number: 5 (lower is better) Translates to: LFTGQNIHAQLILPR*TVSQGGLPLHPGQA Trigger: GGCCTGTCCGGGATGCAGGGGGAGCCCTCCTTGGGAGACAGTTCATCTGGGGAGGATGAGCTGGGCGTGGATGTTCTGCCCAGTGAAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS GCA 90 bp | CATAACCCAGAAGTTCCAGGGGTTGCAGAGTGCGGCAGAATGCGGTaGGCTCCAGGCGGATGTCTACCGGGGACTGAAAGCGGCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: HNPEVPGVAECGRMR*APGGCLPGTESGQH Trigger: GTGCTGGCCGCTTTCAGTCCCCGGTAGACATCCGCCTGGAGCGCACCGCATTCTGCCGCACTCTGCAACCCCTGGAACTTCTGGGTTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS GCA 90 bp | GAGCTCATAACCCAGAAGTTCCAGGGGTTGCAGAGTGCGGCAGAATaGGGTGCGCTCCAGGCGGATGTCTACCGGGGACTGAAAGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: ELITQKFQGLQSAAE*GALQADVYRGLKAA Trigger: GGCCGCTTTCAGTCCCCGGTAGACATCCGCCTGGAGCGCACCGCATTCTGCCGCACTCTGCAACCCCTGGAACTTCTGGGTTATGAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS GCA 90 bp | GGAGAGGCTGGAGCTCATAACCCAGAAGTTCCAGGGGTTGCAGAGTaGGGCAGAATGCGGTGCGCTCCAGGCGGATGTCTACCGGGGACT | + |
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Preference number: 5 (lower is better) Translates to: GEAGAHNPEVPGVAE*GRMRCAPGGCLPGT Trigger: AGTCCCCGGTAGACATCCGCCTGGAGCGCACCGCATTCTGCCGCACTCTGCAACCCCTGGAACTTCTGGGTTATGAGCTCCAGCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CCA 90 bp | CCCAGAGCCATCTTCAGCCCCGGCGGCAGAGTCAGCTGTACCGTGTaGCCATTGTTGGATAGGCTCAGTTCCGGGAGAGGCTGGAGCTCA | + |
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Preference number: 5 (lower is better) Translates to: PRAIFSPGGRVSCTV*PLLDRLSSGRGWSS Trigger: TGAGCTCCAGCCTCTCCCGGAACTGAGCCTATCCAACAATGGCCACACGGTACAGCTGACTCTGCCGCCGGGGCTGAAGATGGCTCTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CCA 90 bp | CCTCCCCATCGGGTGGATCCGCCTCTTCAGGTGCATCCTCTTCACTaGGCAGAACATCCACGCCCAGCTCATCCTCCCCAGATGAACTGT | + |
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Preference number: 5 (lower is better) Translates to: PPHRVDPPLQVHPLH*AEHPRPAHPPQMNC Trigger: ACAGTTCATCTGGGGAGGATGAGCTGGGCGTGGATGTTCTGCCCAGTGAAGAGGATGCACCTGAAGAGGCGGATCCACCCGATGGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CCA 90 bp | TCTTCAGCCCCGGCGGCAGAGTCAGCTGTACCGTGTGGCCATTGTTaGATAGGCTCAGTTCCGGGAGAGGCTGGAGCTCATAACCCAGAA | + |
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Preference number: 5 (lower is better) Translates to: SSAPAAESAVPCGHC*IGSVPGEAGAHNPE Trigger: TTCTGGGTTATGAGCTCCAGCCTCTCCCGGAACTGAGCCTATCCAACAATGGCCACACGGTACAGCTGACTCTGCCGCCGGGGCTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS TCA 90 bp | AAGGCAGCCAAAACTGCCAGGCCTCCTGGGCGGCCCAAGGCTTCATaGAGTTCGGAGAAAGCAGTACTGAGGTGCACCACGTGGATCTCA | + |
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Preference number: 5 (lower is better) Translates to: KAAKTARPPGRPKAS*SSEKAVLRCTTWIS Trigger: TGAGATCCACGTGGTGCACCTCAGTACTGCTTTCTCCGAACTTCATGAAGCCTTGGGCCGCCCAGGAGGCCTGGCAGTTTTGGCTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CCA 90 bp | TTCTGGGCTCTCCTGCAGAAAGGCAGCCAAAACTGCCAGGCCTCCTaGGCGGCCCAAGGCTTCATGAAGTTCGGAGAAAGCAGTACTGAG | + |
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Preference number: 5 (lower is better) Translates to: FWALLQKGSQNCQAS*AAQGFMKFGESSTE Trigger: CTCAGTACTGCTTTCTCCGAACTTCATGAAGCCTTGGGCCGCCCAGGAGGCCTGGCAGTTTTGGCTGCCTTTCTGCAGGAGAGCCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS GCA 90 bp | AGCACTGTTTTCTTCTGGGCTCTCCTGCAGAAAGGCAGCCAAAACTaGCAGGCCTCCTGGGCGGCCCAAGGCTTCATGAAGTTCGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: STVFFWALLQKGSQN*QASWAAQGFMKFGE Trigger: TTCTCCGAACTTCATGAAGCCTTGGGCCGCCCAGGAGGCCTGGCAGTTTTGGCTGCCTTTCTGCAGGAGAGCCCAGAAGAAAACAGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS GCA 90 bp | TCTGCAGCAGGGAAGGAAGCCTCAATCGTTCGCCCATTCAAGGGTTaGGTGGCTCGGAAGTTCAGTTGTAGCCGAGAATCACGAGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: SAAGKEASIVRPFKG*VARKFSCSRESRGP Trigger: GGGACCTCGTGATTCTCGGCTACAACTGAACTTCCGAGCCACGCAACCCTTGAATGGGCGAACGATTGAGGCTTCCTTCCCTGCTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CCA 90 bp | CAGCAGGGAAGGAAGCCTCAATCGTTCGCCCATTCAAGGGTTGCGTaGCTCGGAAGTTCAGTTGTAGCCGAGAATCACGAGGTCCCCACA | + |
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Preference number: 5 (lower is better) Translates to: QQGRKPQSFAHSRVA*LGSSVVAENHEVPT Trigger: TGTGGGGACCTCGTGATTCTCGGCTACAACTGAACTTCCGAGCCACGCAACCCTTGAATGGGCGAACGATTGAGGCTTCCTTCCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS TCA 90 bp | TGCAGGGAGGTGTGGTCAGAGACCCTTCATATCGGTAGTAGCGGCTaGGGTCCGAGGGCAACAGTGCAGATACATCCAAACCTGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: CREVWSETLHIGSSG*GPRATVQIHPNLGS Trigger: AGATCCCAGGTTTGGATGTATCTGCACTGTTGCCCTCGGACCTCAGCCGCTACTACCGATATGAAGGGTCTCTGACCACACCTCCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CAA 90 bp | CATACCCTCAGTCCTGGCACTAAGAAGGCAGAGGCAATCGGATCTCTGAGTTCATCGCCCATTCAAGGGTaGCGTGGCTCGGAAGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: HTLSPGTKKAEAIGSLSSSPIQG*RGSEVQ Trigger: CTGAACTTCCGAGCCACGCAACCCTTGAATGGGCGA...TGAACTCAGAGATCCGATTGCCTCTGCCTTCTTAGTGCCAGGACTGAGGGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS TCA 90 bp | CAGCAAAGAGAAGGCCAAACACCAAGGCTAGGATGTCACCAGCAGTaGAGCAGGAATTCACATGGACTGGCTCAGGGCTGCTATCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: QQREGQTPRLGCHQQ*SRNSHGLAQGCYPL Trigger: CAGAGGATAGCAGCCCTGAGCCAGTCCATGTGAATTCCTGCTTCACTGCTGGTGACATCCTAGCCTTGGTGTTTGGCCTTCTCTTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS GCA 90 bp | AGACCCTTCATATCGGTAGTAGCGGCTGAGGTCCGAGGGCAACAGTaGAGATACATCCAAACCTGGGATCTCAATCTTGGAGCCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: RPFISVVAAEVRGQQ*RYIQTWDLNLGAFL Trigger: GAGGAAGGCTCCAAGATTGAGATCCCAGGTTTGGATGTATCTGCACTGTTGCCCTCGGACCTCAGCCGCTACTACCGATATGAAGGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CAA 90 bp | ATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGGGGCTGAGCAGACACTaGGAGCAGCAGGAACAGCAG | + |
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Preference number: 5 (lower is better) Translates to: IPVIPAFKRLGQENRGFKGLSRH*EQQEQQ Trigger: CTGCTGTTCCTGCTGCTCCAAGTGTCTGCTCAGCCC...CTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS-3UTR CAA 90 bp | ATTCCTGTAATCCCAGCATTCAAGAGGCTGGGACAGGAGAATAGAGGGTTCAAGATCCCCGTGGGAACCTaGACTGTGCTCAGGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: IPVIPAFKRLGQENRGFKIPVGT*TVLRSL Trigger: GAGGCTCCTGAGCACAGTCAAGGTTCCCACGGGGAT...CTTGAACCCTCTATTCTCCTGTCCCAGCCTCTTGAATGCTGGGATTACAGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CCA 90 bp | CCGAGGGCAACAGTGCAGATACATCCAAACCTGGGATCTCAATCTTaGAGCCTTCCTCCGAGATTTCTTCCAAATGGGACAGCAACTGTT | + |
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Preference number: 5 (lower is better) Translates to: PRATVQIHPNLGSQS*SLPPRFLPNGTATV Trigger: AACAGTTGCTGTCCCATTTGGAAGAAATCTCGGAGGAAGGCTCCAAGATTGAGATCCCAGGTTTGGATGTATCTGCACTGTTGCCCTCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS TCA 90 bp | CAGCAAAGAGAAGGCCAAACACCAAGGCTAGGATGTCACCAGCAGTaGAGCAGGAATTCACATGGACTTCCTCCGAGATTTCTTCCAAAT | + |
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Preference number: 5 (lower is better) Translates to: QQREGQTPRLGCHQQ*SRNSHGLPPRFLPN Trigger: ATTTGGAAGAAATCTCGGAGGAAGTCCATGTGAATTCCTGCTTCACTGCTGGTGACATCCTAGCCTTGGTGTTTGGCCTTCTCTTTGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138073.2 |
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| CDS-3UTR CAA 90 bp | CAAGAGAAGGGACTAGAGAGGCTTAGGTCAGTGATAGAACGCTTGCCTAGTAGGAGTTTCACTGTCTCATaGAACACAGTCCAGATGACC | + |
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Preference number: 5 (lower is better) Translates to: QEKGLERLRSVIERLPSRSFTVS*NTVQMT Trigger: GGTCATCTGGACTGTGTTCAATGAGACAGTGAAACT...CCTACTAGGCAAGCGTTCTATCACTGACCTAAGCCTCTCTAGTCCCTTCTCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS GCA 72 bp | CCCCAGTGTAGATGCAACTGCAAGGCCCGGTATTCCTaGCCAGGTCCCAGAGCCATCTTCAGCCCCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: PQCRCNCKARYS*PGPRAIFSPGG Trigger: GCCGCCGGGGCTGAAGATGGCTCTGGGACCTGGGCAGGAATACCGGGCCTTGCAGTTGCATCTACACTGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS TCA 72 bp | GGGCAGAACATCCACGCCCAGCTCATCCTCCCCAGATaGACTGTCTCCCAAGGAGGGCTCCCCCTGCATCCC | + |
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Preference number: 6 (lower is better) Translates to: GQNIHAQLILPR*TVSQGGLPLHP Trigger: GGGATGCAGGGGGAGCCCTCCTTGGGAGACAGTTCATCTGGGGAGGATGAGCTGGGCGTGGATGTTCTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS GCA 72 bp | ACCCAGAAGTTCCAGGGGTTGCAGAGTGCGGCAGAATaGGGTGCGCTCCAGGCGGATGTCTACCGGGGACTG | + |
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Preference number: 6 (lower is better) Translates to: TQKFQGLQSAAE*GALQADVYRGL Trigger: CAGTCCCCGGTAGACATCCGCCTGGAGCGCACCGCATTCTGCCGCACTCTGCAACCCCTGGAACTTCTGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CAA 72 bp | AGCCCCGGCGGCAGAGTCAGCTGTACCGTGTGGCCATaGTTGGATAGGCTCAGTTCCGGGAGAGGCTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPGGRVSCTVWP*LDRLSSGRGWS Trigger: GCTCCAGCCTCTCCCGGAACTGAGCCTATCCAACAATGGCCACACGGTACAGCTGACTCTGCCGCCGGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS GCA 72 bp | GAAGTTCCAGGGGTTGCAGAGTGCGGCAGAATGCGGTaGGCTCCAGGCGGATGTCTACCGGGGACTGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: EVPGVAECGRMR*APGGCLPGTES Trigger: GCTTTCAGTCCCCGGTAGACATCCGCCTGGAGCGCACCGCATTCTGCCGCACTCTGCAACCCCTGGAACTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CCA 72 bp | CGGGTGGATCCGCCTCTTCAGGTGCATCCTCTTCACTaGGCAGAACATCCACGCCCAGCTCATCCTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RVDPPLQVHPLH*AEHPRPAHPPQ Trigger: CTGGGGAGGATGAGCTGGGCGTGGATGTTCTGCCCAGTGAAGAGGATGCACCTGAAGAGGCGGATCCACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CAA 72 bp | GAGAGGCTGGAGCTCATAACCCAGAAGTTCCAGGGGTaGCAGAGTGCGGCAGAATGCGGTGCGCTCCAGGCG | + |
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Preference number: 6 (lower is better) Translates to: ERLELITQKFQG*QSAAECGALQA Trigger: CGCCTGGAGCGCACCGCATTCTGCCGCACTCTGCAACCCCTGGAACTTCTGGGTTATGAGCTCCAGCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CAA 72 bp | CCCGGCGGCAGAGTCAGCTGTACCGTGTGGCCATTGTaGGATAGGCTCAGTTCCGGGAGAGGCTGGAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: PGGRVSCTVWPL*DRLSSGRGWSS Trigger: TGAGCTCCAGCCTCTCCCGGAACTGAGCCTATCCAACAATGGCCACACGGTACAGCTGACTCTGCCGCCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CAA 90 bp | CAGTTCCGGGAGAGGCTGGAGCTCATAACCCAGAAGTTCCAGGGGTaGCAGAGTGCGGCAGAATGCGGTGCGCTCCAGGCGGATGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: QFRERLELITQKFQG*QSAAECGALQADVY Trigger: GTAGACATCCGCCTGGAGCGCACCGCATTCTGCCGCACTCTGCAACCCCTGGAACTTCTGGGTTATGAGCTCCAGCCTCTCCCGGAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CCA 72 bp | CCGGCGGCAGAGTCAGCTGTACCGTGTGGCCATTGTTaGATAGGCTCAGTTCCGGGAGAGGCTGGAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PAAESAVPCGHC*IGSVPGEAGAH Trigger: ATGAGCTCCAGCCTCTCCCGGAACTGAGCCTATCCAACAATGGCCACACGGTACAGCTGACTCTGCCGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CCA 72 bp | ATCTTCAGCCCCGGCGGCAGAGTCAGCTGTACCGTGTaGCCATTGTTGGATAGGCTCAGTTCCGGGAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: IFSPGGRVSCTV*PLLDRLSSGRG Trigger: GCCTCTCCCGGAACTGAGCCTATCCAACAATGGCCACACGGTACAGCTGACTCTGCCGCCGGGGCTGAAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS GCA 72 bp | TTCTTCTGGGCTCTCCTGCAGAAAGGCAGCCAAAACTaGCAGGCCTCCTGGGCGGCCCAAGGCTTCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: FFWALLQKGSQN*QASWAAQGFMK Trigger: CTTCATGAAGCCTTGGGCCGCCCAGGAGGCCTGGCAGTTTTGGCTGCCTTTCTGCAGGAGAGCCCAGAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CCA 72 bp | CTCCTGCAGAAAGGCAGCCAAAACTGCCAGGCCTCCTaGGCGGCCCAAGGCTTCATGAAGTTCGGAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LLQKGSQNCQAS*AAQGFMKFGES Trigger: GCTTTCTCCGAACTTCATGAAGCCTTGGGCCGCCCAGGAGGCCTGGCAGTTTTGGCTGCCTTTCTGCAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS TCA 72 bp | AAAACTGCCAGGCCTCCTGGGCGGCCCAAGGCTTCATaGAGTTCGGAGAAAGCAGTACTGAGGTGCACCACG | + |
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Preference number: 6 (lower is better) Translates to: KTARPPGRPKAS*SSEKAVLRCTT Trigger: CGTGGTGCACCTCAGTACTGCTTTCTCCGAACTTCATGAAGCCTTGGGCCGCCCAGGAGGCCTGGCAGTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS CAA 90 bp | ACGGAGAGAGTATGGAGCTGCTTAGCGCTCAGTTTCACTGTCTCATaGAACACAGTCCAGATGACCCCCTGGCTGCAGGGAGGTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TERVWSCLALSFTVS*NTVQMTPWLQGGVV Trigger: GACCACACCTCCCTGCAGCCAGGGGGTCATCTGGACTGTGTTCAATGAGACAGTGAAACTGAGCGCTAAGCAGCTCCATACTCTCTCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS TCA 72 bp | GGCCCAAGGCTTCATGAAGTTCGGAGAAAGCAGTACTaGGGTGCACCACGTGGATCTCAGCAGGGAAACGGT | + |
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Preference number: 6 (lower is better) Translates to: GPRLHEVRRKQY*GAPRGSQQGNG Trigger: ACCGTTTCCCTGCTGAGATCCACGTGGTGCACCTCAGTACTGCTTTCTCCGAACTTCATGAAGCCTTGGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030183.10 ENSMUST00000138073.2 |
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| CDS GCA 72 bp | CTAACTCTATCTTTGGTCCCACTTCTGTGCCTGTGCTaGCTCCTCAGCTGTAGGAGGAAGGCGATGCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LTLSLVPLLCLC*LLSCRRKAMLV Trigger: CACCAGCATCGCCTTCCTCCTACAGCTGAGGAGGCAGCACAGGCACAGAAGTGGGACCAAAGATAGAGTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS TCA 72 bp | GTGTGGTCAGAGACCCTTCATATCGGTAGTAGCGGCTaGGGTCCGAGGGCAACAGTGCAGATACATCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VWSETLHIGSSG*GPRATVQIHPN Trigger: GTTTGGATGTATCTGCACTGTTGCCCTCGGACCTCAGCCGCTACTACCGATATGAAGGGTCTCTGACCACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS GCA 72 bp | GGGAAGGAAGCCTCAATCGTTCGCCCATTCAAGGGTTaGGTGGCTCGGAAGTTCAGTTGTAGCCGAGAATCA | + |
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Preference number: 6 (lower is better) Translates to: GKEASIVRPFKG*VARKFSCSRES Trigger: TGATTCTCGGCTACAACTGAACTTCCGAGCCACGCAACCCTTGAATGGGCGAACGATTGAGGCTTCCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CCA 72 bp | AGGAAGCCTCAATCGTTCGCCCATTCAAGGGTTGCGTaGCTCGGAAGTTCAGTTGTAGCCGAGAATCACGAG | + |
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Preference number: 6 (lower is better) Translates to: RKPQSFAHSRVA*LGSSVVAENHE Trigger: CTCGTGATTCTCGGCTACAACTGAACTTCCGAGCCACGCAACCCTTGAATGGGCGAACGATTGAGGCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CAA 72 bp | GTATGGAGCTGCTTAGCGCTCAGTTTCACTGTCTCATaGAACACAGTCCAGATGACCCCCTGGCTGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: VWSCLALSFTVS*NTVQMTPWLQG Trigger: TCCCTGCAGCCAGGGGGTCATCTGGACTGTGTTCAATGAGACAGTGAAACTGAGCGCTAAGCAGCTCCATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CCA 72 bp | GAGGTCCGAGGGCAACAGTGCAGATACATCCAAACCTaGGATCTCAATCTTGGAGCCTTCCTCCGAGATTTC | + |
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Preference number: 6 (lower is better) Translates to: EVRGQQCRYIQT*DLNLGAFLRDF Trigger: GAAATCTCGGAGGAAGGCTCCAAGATTGAGATCCCAGGTTTGGATGTATCTGCACTGTTGCCCTCGGACCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS GCA 72 bp | ATATCGGTAGTAGCGGCTGAGGTCCGAGGGCAACAGTaGAGATACATCCAAACCTGGGATCTCAATCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: ISVVAAEVRGQQ*RYIQTWDLNLG Trigger: TCCAAGATTGAGATCCCAGGTTTGGATGTATCTGCACTGTTGCCCTCGGACCTCAGCCGCTACTACCGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS GCA 72 bp | CGAGGTCCCCACAAGGAAACGGAGAGAGTATGGAGCTaGTTAGCGCTCAGTTTCACTGTCTCATTGAACACA | + |
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Preference number: 6 (lower is better) Translates to: RGPHKETERVWS*LALSFTVSLNT Trigger: TGTGTTCAATGAGACAGTGAAACTGAGCGCTAAGCAGCTCCATACTCTCTCCGTTTCCTTGTGGGGACCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CCA 72 bp | GAATCACGAGGTCCCCACAAGGAAACGGAGAGAGTATaGAGCTGCTTAGCGCTCAGTTTCACTGTCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: ESRGPHKETERV*SCLALSFTVSL Trigger: CAATGAGACAGTGAAACTGAGCGCTAAGCAGCTCCATACTCTCTCCGTTTCCTTGTGGGGACCTCGTGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CAA 90 bp | TCCGAGGGCAACAGTGCAGATACATCCAAACCTGGGATCTCAATCTaGGAGCCTTCCTCCGAGATTTCTTCCAAATGGGACAGCAACTGT | + |
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Preference number: 6 (lower is better) Translates to: SEGNSADTSKPGISI*EPSSEISSKWDSNC Trigger: ACAGTTGCTGTCCCATTTGGAAGAAATCTCGGAGGAAGGCTCCAAGATTGAGATCCCAGGTTTGGATGTATCTGCACTGTTGCCCTCGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030183.10 |
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| CDS CCA 72 bp | GCTAGGATGTCACCAGCAGTGAAGCAGGAATTCACATaGACTTCCTCCGAGATTTCTTCCAAATGGGACAGC | + |
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Preference number: 6 (lower is better) Translates to: ARMSPAVKQEFT*TSSEISSKWDS Trigger: GCTGTCCCATTTGGAAGAAATCTCGGAGGAAGTCCATGTGAATTCCTGCTTCACTGCTGGTGACATCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138073.2 |
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