Pregenerated sensors for CAR7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031883Ensembl transcript IDs: ENSMUST00000056051.11, ENSMUST00000159416.8, ENSMUST00000162761.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAACAAAGGGAGATCATATAGAAGCTAAAGCCAGGGCCTGCCCGTaGCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GTKGDHIEAKARACP*QQMTGGGHIASSVW Trigger: CCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGCCACGGGCAGGCCCTGGCTTTAGCTTCTATATGATCTCCCTTTGTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR TCA 90 bp | GGGCTGTGTCTTGGCCATCACAGTGTGAACTCCAGTTGGGGCTGCTaGTGCAGCCAGCAGGGAAGACAGGAGGAGATTCTCAGGGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: GLCLGHHSVNSSWGC*CSQQGRQEEILRGL Trigger: AAGGCCCCTGAGAATCTCCTCCTGTCTTCCCTGCTGGCTGCATCAGCAGCCCCAACTGGAGTTCACACTGTGATGGCCAAGACACAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR GCA 90 bp | TGGGTAGGAACAAAGGGAGATCATATAGAAGCTAAAGCCAGGGCCTaGCCGTGGCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: WVGTKGDHIEAKARA*PWQQMTGGGHIASS Trigger: GCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGCCACGGGCAGGCCCTGGCTTTAGCTTCTATATGATCTCCCTTTGTTCCTACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR CCA 90 bp | AGCCAGCAGGGAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTaGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SQQGRQEEILRGLWI*RNGGSPGLDSAQFL Trigger: CAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTCCCTGCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR TCA 90 bp | CCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTaGGGTGCATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: PHRLQRLGAIVMAWQ*GACMAEACRRGNAE Trigger: CTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATGCACCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGGCCTGCCCGTGGCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGGCCTGGCAGTGAGGTaGATGTATGGCAGAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: ARACPWQQMTGGGHIASSGLAVR*MYGRGL Trigger: CAGGCCTCTGCCATACATGCACCTCACTGCCAGGCC...GCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGCCACGGGCAGGCCCTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGCGCACCCTCCCCTAACTaGGAGCGAGCCTCAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: ATSPPASGCYCNGLAVRCAPSPN*ERASDG Trigger: ACCATCTGAGGCTCGCTCCCAGTTAGGGGAGGGTGC...GCACCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGGTTTGGTGTCTGCTaGCATGGAAGCCCTTGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GATSPPASGCYCNGLAVRWFGVC*HGSPWE Trigger: CTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCA...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR CAA 90 bp | CTGATGCAGCCAGCAGGGAAGACAGGAGGAGATTCTCAGGGGCCTTaGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LMQPAGKTGGDSQGP*DLEERRQPRFGLCS Trigger: TGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTCCCTGCTGGCTGCATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCAAAGCCCTTGGGAGGATaGTACCCCAGTGGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HVWQRPAEEVMQSGQLCPKPLGG*YPSGWL Trigger: CAGCCAGCCACTGGGGTACCATCCTCCCAAGGGCTT...TGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAGAGGCAGCCCAGGTTTaGACTCTGCTCAGTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: AADDWRGPHRLQRLGAIVEAAQV*TLLSSC Trigger: ACAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTC...TACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGCAGAGGTAATGCAGAGTaGGCAGCTCTGCCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: ATSPPASGCYCNGLAVRCRGNAE*AALPTS Trigger: AGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCT...GCACCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGCCTGGTGTCTGCTGACATaGAAGCCCTTGGGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: EDRRRFSGAFGSGGTEAAWCLLT*KPLGGW Trigger: CCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCA...GGCTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | CCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCTGAAGGAGGGCCGTGCACCCTCCCCTAACTaGGAGCGAGCCTCAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: PSRTLQCGQGASQLKEGRAPSPN*ERASDG Trigger: ACCATCTGAGGCTCGCTCCCAGTTAGGGGAGGGTGC...ACGGCCCTCCTTCAGCTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAAGGATGGTACCCCAGTaGCTGGCTGGGGAGGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: EGTPNSRVPSRTLQCGQGRMVPQ*LAGEVG Trigger: TCCCACCTCCCCAGCCAGCCACTGGGGTACCATCCT...TCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | CATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCATGGTGTCTGCTGACATaGAAGCCCTTGGGAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: HVWQRPAEEVMQSGQLCPWCLLT*KPLGGW Trigger: CCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCA...TGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTTGGTGTCTGCTGACATaGAAGCCCTTGGGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: PLDLEERRQPRFGLCSVPWCLLT*KPLGGW Trigger: CCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCA...AGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAAAGCCCGTGGCAGCAGATaGCTGGAGGGGGCCACATCG | + |
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Preference number: 2 (lower is better) Translates to: VGGFGGWVGTKGDHIEAKARGSR*LEGATS Trigger: CGATGTGGCCCCCTCCAGTCATCTGCTGCCACGGGC...TTTAGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR GCA 90 bp | GGGAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTaGTCAGTTCCTGTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: GKTGGDSQGPLDLEERRQPRFGL*SVPVLP Trigger: TGGAAGAACAGGAACTGAGCAGAGTCCAAACCTGGG...CTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTGAGCCTCAGATGGTTTaGTGTCTGCTGACATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: MAEACRRGNAEWAALPTSEPQMV*CLLTWK Trigger: CTTCCATGTCAGCAGACACCAAACCATCTGAGGCTC...AGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCTGGTTTGGTGTCTGCTaGCATGGAAGCCCTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GYPQLKGSIKNPSMWSRSWFGVC*HGSPWE Trigger: CTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCA...GCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR GCA 90 bp | CATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCCAGGTTTGGACTCTaGTCAGTTCCTGTTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: HVWQRPAEEVMQSGQLCPPRFGL*SVPVLP Trigger: TGGAAGAACAGGAACTGAGCAGAGTCCAAACCTGGG...TGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTTATGGCAGAGACAGCTaGCAATCCCGCCCCGCGGGG | + |
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Preference number: 2 (lower is better) Translates to: YVGGFGGWVGTKGDHIEAYGRDS*QSRPAG Trigger: CCCCGCGGGGCGGGATTGGCAGCTGTCTCTGCCATA...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGCTTGCTTGAGTCTTTATaGCAGAGACAGCTGCCAATC | + |
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Preference number: 2 (lower is better) Translates to: ATSPPASGCYCNGLAVRCLLESL*QRQLPI Trigger: GATTGGCAGCTGTCTCTGCCATAAAGACTCAAGCAA...GCACCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGCCTCTAATTATTGCTTaGGTCTTTATGGCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: GATSPPASGCYCNGLAVRPLIIA*VFMAET Trigger: TGTCTCTGCCATAAAGACTCAAGCAATAATTAGAGG...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTAATTATTGCTTGTGGTTTGGTGTCTGCTaGCATGGAAGCCCTTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: CRRGNAEWAALPTSNYCLWFGVC*HGSPWE Trigger: CTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCA...CAAGCAATAATTAGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTACCTCTAATTATTGCTTaGGTCTTTATGGCAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: AADDWRGPHRLQRLGAIVPLIIA*VFMAET Trigger: TGTCTCTGCCATAAAGACTCAAGCAATAATTAGAGG...TACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAAAGCACCCTCCCCTAACTaGGAGCGAGCCTCAGATGGT | + |
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Preference number: 2 (lower is better) Translates to: VGGFGGWVGTKGDHIEAKAPSPN*ERASDG Trigger: ACCATCTGAGGCTCGCTCCCAGTTAGGGGAGGGTGC...TTTAGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGAGCCTCAGATGGTTTaGTGTCTGCTGACATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: EGTPNSRVPSRTLQCGQGEPQMV*CLLTWK Trigger: CTTCCATGTCAGCAGACACCAAACCATCTGAGGCTC...TCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGGTGCATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGTTGCTTGAGTCTTTATaGCAGAGACAGCTGCCAATC | + |
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Preference number: 2 (lower is better) Translates to: SEVHVWQRPAEEVMQSGQLLESL*QRQLPI Trigger: GATTGGCAGCTGTCTCTGCCATAAAGACTCAAGCAA...CTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATGCACCTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR GCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTCCTCCAGCGTCTGGGTaGTATTGTAATGGCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: YVGGFGGWVGTKGDHIEAPPASG*YCNGLA Trigger: TGCCAGGCCATTACAATAGCACCCAGACGCTGGAGG...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTGAGGCAGCCCAGGTTTaGACTCTGCTCAGTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: YVGGFGGWVGTKGDHIEAEAAQV*TLLSSC Trigger: ACAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTC...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTGCAGGGGCTGTGTCTTaGCCATCACAGTGTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: YVGGFGGWVGTKGDHIEAAGAVS*PSQCEL Trigger: GAGTTCACACTGTGATGGCCAAGACACAGCCCCTGC...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAGAGGTAATGCAGAGTaGGCAGCTCTGCCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: YVGGFGGWVGTKGDHIEARGNAE*AALPTS Trigger: AGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCT...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAGTGAGGTGCATGTATaGCAGAGGCCTGCAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: YVGGFGGWVGTKGDHIEASEVHV*QRPAEE Trigger: CTCTTCTGCAGGCCTCTGCCATACATGCACCTCACT...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTGAGCCTCAGATGGTTTaGTGTCTGCTGACATGGAAG | + |
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Preference number: 2 (lower is better) Translates to: YVGGFGGWVGTKGDHIEAEPQMV*CLLTWK Trigger: CTTCCATGTCAGCAGACACCAAACCATCTGAGGCTC...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGGCCTGCCCGTGGCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGGAGGCAGCCCAGGTTaGGACTCTGCTCAGTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: ARACPWQQMTGGGHIASSGGSPG*DSAQFL Trigger: CAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCC...GCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGCCACGGGCAGGCCCTGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR CCA 72 bp | GGGAGCGAGCCTCAGATGGTTTGGTGTCTGCTGACATaGAAGCCCTTGGGAGGATGGTACCCCAGTGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GSEPQMVWCLLT*KPLGGWYPSGW Trigger: CCAGCCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCATCTGAGGCTCGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTACTGACATGGAAGCCCTaGGGAGGATGGTACCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: AADDWRGPHRLQRLGAIVLTWKP*GGWYPS Trigger: ACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAG...TACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CAA 90 bp | GCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGCGATTCTCAGGGGCCTTaGGATCTGGAGGAACGGAGG | + |
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Preference number: 3 (lower is better) Translates to: ATSPPASGCYCNGLAVRCDSQGP*DLEERR Trigger: CCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATC...GCACCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGGTGCATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTGACATGGAAGCCCTaGGGAGGATGGTACCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: SEVHVWQRPAEEVMQSGQLTWKP*GGWYPS Trigger: ACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAG...CTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATGCACCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGAGGTGCATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGGATTCTCAGGGGCCTTaGGATCTGGAGGAACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SEVHVWQRPAEEVMQSGQDSQGP*DLEERR Trigger: CCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATC...CTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATGCACCTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTAATTATTGCTTGGGAGGCAGCCCAGGTTaGGACTCTGCTCAGTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CRRGNAEWAALPTSNYCLGGSPG*DSAQFL Trigger: CAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCC...CAAGCAATAATTAGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| 3UTR TCA 72 bp | CAGAGTGGGCAGCTCTGCCCACCTCTAATTATTGCTTaGGTCTTTATGGCAGAGACAGCTGCCAATCCCGCC | + |
|
Preference number: 3 (lower is better) Translates to: QSGQLCPPLIIA*VFMAETAANPA Trigger: GGCGGGATTGGCAGCTGTCTCTGCCATAAAGACTCAAGCAATAATTAGAGGTGGGCAGAGCTGCCCACTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTAATTATTGCTTGCTGACATGGAAGCCCTaGGGAGGATGGTACCCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CRRGNAEWAALPTSNYCLLTWKP*GGWYPS Trigger: ACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAG...CAAGCAATAATTAGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTAATTATTGCTTGGATTCTCAGGGGCCTTaGGATCTGGAGGAACGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CRRGNAEWAALPTSNYCLDSQGP*DLEERR Trigger: CCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATC...CAAGCAATAATTAGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCGAGCCTCAGATGGTTaGGTGTCTGCTGACATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PNSRVPSRTLQCGQGASQRASDG*VSADME Trigger: TTCCATGTCAGCAGACACCAAACCATCTGAGGCTCG...CTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAAACGAGCCTCAGATGGTTaGGTGTCTGCTGACATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGGFGGWVGTKGDHIEAKRASDG*VSADME Trigger: TTCCATGTCAGCAGACACCAAACCATCTGAGGCTCG...TTTAGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGCCTGCCCGTGGCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCCAGGCGGTTCATGCTTaGGTGCTCATCTCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ARACPWQQMTGGGHIASSQAVHA*VLISCL Trigger: GAGACAGGAGATGAGCACCCAAGCATGAACCGCCTG...GCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGCCACGGGCAGGCCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTTGCCGTCCACTGTGTaGTCTGAGCCCATGTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GATSPPASGCYCNGLAVRLPSTV*SEPMSR Trigger: GCGCGACATGGGCTCAGAGCACACAGTGGACGGCAA...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTCCAGTGGCTGCAGGCTaGGCGAGTACACAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MAEACRRGNAEWAALPTSPVAAG*ASTQPG Trigger: GCCAGGCTGTGTACTCGCCCAGCCTGCAGCCACTGG...AGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
||
| CDS-3UTR CCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGAGTAGTGTCGGCTGGTaGGCAGCAGGCACTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GATSPPASGCYCNGLAVRSSVGW*AAGTWG Trigger: ACCCCAAGTGCCTGCTGCCCACCAGCCGACACTACT...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGGGAAGTGGAGCTGCTTaGGACGATAGGGCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GATSPPASGCYCNGLAVRGSGAA*DDRALP Trigger: TGGAAGGGCCCTATCGTCTCAAGCAGCTCCACTTCC...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCTGCTGACATGGAAGCCCTTGGGAGGATGGTACCCCAGTGGCTGGCTGTTGCCGTCCACTGTGTaGTCTGAGCCCATGTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: WCLLTWKPLGGWYPSGWLLPSTV*SEPMSR Trigger: GCGCGACATGGGCTCAGAGCACACAGTGGACGGCAA...CAGCCAGCCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTATCCAGTAGTGTCGGCTaGTGGGCAGCAGGCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AADDWRGPHRLQRLGAIVSSSVG*WAAGTW Trigger: CCAAGTGCCTGCTGCCCACCAGCCGACACTACTGGA...TACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAGACACTCTCACTGAGTaGGGGTGTGGTCAGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AADDWRGPHRLQRLGAIVDTLTE*GCGQGA Trigger: GGCTCCCTGACCACACCCCCACTCAGTGAGAGTGTC...TACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTACCATGTCGCGCTTCTTaGCCCAGTGGAAGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AADDWRGPHRLQRLGAIVPCRAS*PSGSGA Trigger: AGCTCCACTTCCACTGGGGCAAGAAGCGCGACATGG...TACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTCAGGCCTGGAAGGATaGTTTGACCACTCGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GATSPPASGCYCNGLAVRSGLEG*FDHSAL Trigger: AAGGGCCGAGTGGTCAAAGCATCCTTCCAGGCCTGA...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGCCGACACTCTCACTGAGTaGGGGTGTGGTCAGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EDRRRFSGAFGSGGTEAADTLTE*GCGQGA Trigger: GGCTCCCTGACCACACCCCCACTCAGTGAGAGTGTC...GGCTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGCCTGCCCGTGGCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCAAGTTGTCCACCATATaGATCCTCTCATCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ARACPWQQMTGGGHIASSKLSTI*ILSSSS Trigger: AGAGGATGATGAGAGGATCCATATGGTGGACAACTT...GCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGCCACGGGCAGGCCCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTGGAAGTGGAGCTGCTTaGGACGATAGGGCCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MAEACRRGNAEWAALPTSGSGAA*DDRALP Trigger: TGGAAGGGCCCTATCGTCTCAAGCAGCTCCACTTCC...AGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | CCTTTGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTCCTGGAAGGATGCTTTaGCCACTCGGCCCTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLDLEERRQPRFGLCSVPPGRML*PLGPSA Trigger: CGCTGAAGGGCCGAGTGGTCAAAGCATCCTTCCAGG...AGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTTTGGTGTCTGCTGACATGGAAGCCCTTGGGAGGATGGTACCCCAGTGGCCGCTGGGGAAGGACTTaGCGTCCACTGTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: MVWCLLTWKPLGGWYPSGRWGRT*RPLCAL Trigger: CAGAGCACACAGTGGACGGCAAGTCCTTCCCCAGCG...GCCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GATGGTTTGGTGTCTGCTGACATGGAAGCCCTTGGGAGGATGGTACCCCAGTGGCGCTGGGGAAGGACTTaGCGTCCACTGTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGLVSADMEALGRMVPQWRWGRT*RPLCAL Trigger: CAGAGCACACAGTGGACGGCAAGTCCTTCCCCAGCG...CCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | TGGTGTCTGCTGACATGGAAGCCCTTGGGAGGATGGTACCCCAGTGGCTGGCTGCGGTTCATGCTTGGGTaGTCATCTCCTGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WCLLTWKPLGGWYPSGWLRFMLG*SSPVSR Trigger: CCTGGAGACAGGAGATGAGCACCCAAGCATGAACCG...CAGCCAGCCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGGGTCTCCCTGGGCAATaGGATACAGCTTGTGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GATSPPASGCYCNGLAVRGLPGQ*DTACAN Trigger: ATTGGCACAAGCTGTATCCCATTGCCCAGGGAGACC...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
||
| CDS-3UTR CCA 90 bp | GCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGCCGCTTCTTGCCCCAGTaGAAGTGGAGCTGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATSPPASGCYCNGLAVRCRFLPQ*KWSCLR Trigger: TCTCAAGCAGCTCCACTTCCACTGGGGCAAGAAGCG...GCACCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTCCAGATGTAGCTCGCTaGGGAAGGACTTGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MAEACRRGNAEWAALPTSPDVAR*GRTCRP Trigger: TGGACGGCAAGTCCTTCCCCAGCGAGCTACATCTGG...AGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGTCTGCTGACATGGAAGCCCTTGGGAGGATGGTACCCCAGTGGCTGGCTGCAGGCGGTTCATGCTTaGGTGCTCATCTCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WCLLTWKPLGGWYPSGWLQAVHA*VLISCL Trigger: GAGACAGGAGATGAGCACCCAAGCATGAACCGCCTG...CAGCCAGCCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTACAGGCGGTTCATGCTTaGGTGCTCATCTCCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AADDWRGPHRLQRLGAIVQAVHA*VLISCL Trigger: GAGACAGGAGATGAGCACCCAAGCATGAACCGCCTG...TACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTAGTAGTGTCGGCTGGTaGGCAGCAGGCACTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: PLDLEERRQPRFGLCSVPSSVGW*AAGTWG Trigger: ACCCCAAGTGCCTGCTGCCCACCAGCCGACACTACT...AGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | TTTGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTGTCCTGGAAGGATGCTTTaGCCACTCGGCCCTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FGSGGTEAAQVWTLLSSCPGRML*PLGPSA Trigger: CGCTGAAGGGCCGAGTGGTCAAAGCATCCTTCCAGG...ACAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGCAAAAGTTCCAGTGGCTaGAGGCTGGGCGAGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: ATSPPASGCYCNGLAVRCKSSSG*RLGEYT Trigger: TGTGTACTCGCCCAGCCTGCAGCCACTGGAACTTTT...GCACCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
||
| CDS-3UTR GCA 90 bp | GATGGTTTGGTGTCTGCTGACATGGAAGCCCTTGGGAGGATGGTACCCCAGTGGCCATGTCGCGCTTCTTaGCCCAGTGGAAGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGLVSADMEALGRMVPQWPCRAS*PSGSGA Trigger: AGCTCCACTTCCACTGGGGCAAGAAGCGCGACATGG...CCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCTGGAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGTTGCCGTCCACTGTGTaGTCTGAGCCCATGTCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GSWRVPPTQGFHQEPFNVLPSTV*SEPMSR Trigger: GCGCGACATGGGCTCAGAGCACACAGTGGACGGCAA...CACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTCCAGCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTGTTCTTCCAGCCCGCCTCCCCAAAAGTaGTGTACTTCTTGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GGTEAAQVWTLLSSCSSSPPPQK*CTSWRS Trigger: GGAACGCCAAGAAGTACAGCACTTTTGGGGAGGCGG...GCTGGAAGAACAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GGGAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGCGGTTCATGCTTGGGTaGTCATCTCCTGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKTGGDSQGPLDLEERRQRFMLG*SSPVSR Trigger: CCTGGAGACAGGAGATGAGCACCCAAGCATGAACCG...CTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTGTTCTTCCAGCCGCTTCTTGCCCCAGTaGAAGTGGAGCTGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGTEAAQVWTLLSSCSSSRFLPQ*KWSCLR Trigger: TCTCAAGCAGCTCCACTTCCACTGGGGCAAGAAGCG...GCTGGAAGAACAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTGGAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGTCCAGTAGTGTCGGCTaGTGGGCAGCAGGCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSWRVPPTQGFHQEPFNVSSSVG*WAAGTW Trigger: CCAAGTGCCTGCTGCCCACCAGCCGACACTACTGGA...CACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTCCAGCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGTCATCACTGTCATTaGAGTCCACCTGGACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GATSPPASGCYCNGLAVRCHHCH*SPPGQS Trigger: ACTCTGTCCAGGTGGACTTCAATGACAGTGATGACA...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGGGCGAGTACACAGCCTaGCTGGATATGATATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GATSPPASGCYCNGLAVRGEYTA*LDMILM Trigger: CATCAATATCATATCCAGCCAGGCTGTGTACTCGCC...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTGGAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGCCAGATGTAGCTCGCTaGGGAAGGACTTGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSWRVPPTQGFHQEPFNVPDVAR*GRTCRP Trigger: TGGACGGCAAGTCCTTCCCCAGCGAGCTACATCTGG...CACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTCCAGCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | CCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCCTGGAAGGATGCTTTaGCCACTCGGCCCTTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PNSRVPSRTLQCGQGASQPGRML*PLGPSA Trigger: CGCTGAAGGGCCGAGTGGTCAAAGCATCCTTCCAGG...CTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGACGCTGGGGAAGGACTTaGCGTCCACTGTGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGTPNSRVPSRTLQCGQGRWGRT*RPLCAL Trigger: CAGAGCACACAGTGGACGGCAAGTCCTTCCCCAGCG...TCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | CCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCTGAAGGAGGGCCGTTCAGGCCTGGAAGGATaGTTTGACCACTCGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSRTLQCGQGASQLKEGRSGLEG*FDHSAL Trigger: AAGGGCCGAGTGGTCAAAGCATCCTTCCAGGCCTGA...ACGGCCCTCCTTCAGCTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GATGGTTTGGTGTCTGCTGACATGGAAGCCCTTGGGAGGATGGTACCCCAGTGGTCCACCTGGACAGAGTaGCCATTGTTGGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DGLVSADMEALGRMVPQWSTWTE*PLLVML Trigger: CAGCATCACCAACAATGGCCACTCTGTCCAGGTGGA...CCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGTGCATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCGCTTCTTGCCCCAGTaGAAGTGGAGCTGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEVHVWQRPAEEVMQSGQRFLPQ*KWSCLR Trigger: TCTCAAGCAGCTCCACTTCCACTGGGGCAAGAAGCG...CTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATGCACCTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | CCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGTCCAGTAGTGTCGGCTaGTGGGCAGCAGGCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PNSRVPSRTLQCGQGASQSSSVG*WAAGTW Trigger: CCAAGTGCCTGCTGCCCACCAGCCGACACTACTGGA...CTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | CCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGGACACTCTCACTGAGTaGGGGTGTGGTCAGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PNSRVPSRTLQCGQGASQDTLTE*GCGQGA Trigger: GGCTCCCTGACCACACCCCCACTCAGTGAGAGTGTC...CTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | GAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGCCTGTCATCACTGTCATTaGAGTCCACCTGGACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EDRRRFSGAFGSGGTEAACHHCH*SPPGQS Trigger: ACTCTGTCCAGGTGGACTTCAATGACAGTGATGACA...GGCTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | CATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACATCATCCTCTGAGGTaGAAAGCAGGCTCCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: HVWQRPAEEVMQSGQLCPHHPLR*KAGSGI Trigger: AATTCCGGAGCCTGCTTTTCACCTCAGAGGATGATG...TGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | GGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCCCGCCTCCCCAAAAGTaGTGTACTTCTTGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GYPQLKGSIKNPSMWSRSPPPQK*CTSWRS Trigger: GGAACGCCAAGAAGTACAGCACTTTTGGGGAGGCGG...GCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | CCTTTGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTATAGAAAAGTTCCAGTaGCTGCAGGCTGGGCGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PLDLEERRQPRFGLCSVPIEKFQ*LQAGRV Trigger: TACTCGCCCAGCCTGCAGCCACTGGAACTTTTCTAT...AGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
||
| CDS-3UTR CCA 90 bp | GAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGACCAGATGTAGCTCGCTaGGGAAGGACTTGCCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGTPNSRVPSRTLQCGQGPDVAR*GRTCRP Trigger: TGGACGGCAAGTCCTTCCCCAGCGAGCTACATCTGG...TCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGTGCTTGAAGCAGCTGAACTaGGCCTTGGTGTCCTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ATSPPASGCYCNGLAVRCLKQLN*ALVSLN Trigger: ATTTAAGGACACCAAGGCCCAGTTCAGCTGCTTCAA...GCACCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | CCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCTGAAGGAGGGCCGTATGGGATACAGCTTGTaGCAATTTGAAGGGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSRTLQCGQGASQLKEGRMGYSL*QFEGPS Trigger: CGACGGCCCTTCAAATTGGCACAAGCTGTATCCCAT...ACGGCCCTCCTTCAGCTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
||
| CDS-3UTR GCA 90 bp | CCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCCGCCTCCCCAAAAGTaGTGTACTTCTTGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PNSRVPSRTLQCGQGASQPPPQK*CTSWRS Trigger: GGAACGCCAAGAAGTACAGCACTTTTGGGGAGGCGG...CTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR GCA 90 bp | CCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCGGTTCATGCTTGGGTaGTCATCTCCTGTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNSRVPSRTLQCGQGASQRFMLG*SSPVSR Trigger: CCTGGAGACAGGAGATGAGCACCCAAGCATGAACCG...CTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCTCCACCTGGACAGAGTaGCCATTGTTGGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GYPQLKGSIKNPSMWSRSSTWTE*PLLVML Trigger: CAGCATCACCAACAATGGCCACTCTGTCCAGGTGGA...GCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTGGAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGTCATTGAAGTCCACCTaGACAGAGTGGCCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSWRVPPTQGFHQEPFNVSLKST*TEWPLL Trigger: CAACAATGGCCACTCTGTCCAGGTGGACTTCAATGA...CACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTCCAGCTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGTGCATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGTCATTGAAGTCCACCTaGACAGAGTGGCCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SEVHVWQRPAEEVMQSGQSLKST*TEWPLL Trigger: CAACAATGGCCACTCTGTCCAGGTGGACTTCAATGA...CTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATGCACCTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GATGGTTTGGTGTCTGCTGACATGGAAGCCCTTGGGAGGATGGTACCCCAGTGGAAGTGCTGTACTTCTTaGCGTTCCAGTGAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: DGLVSADMEALGRMVPQWKCCTS*RSSEPD Trigger: ATCTGGTTCACTGGAACGCCAAGAAGTACAGCACTT...CCACTGGGGTACCATCCTCCCAAGGGCTTCCATGTCAGCAGACACCAAACCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCAGTAGTGTCGGCTGGTaGGCAGCAGGCACTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCRWLWWLGRNKGRSYRSSSVGW*AAGTWG Trigger: ACCCCAAGTGCCTGCTGCCCACCAGCCGACACTACT...GCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR CCA 90 bp | GGGAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGAAGTTGTCCACCATATaGATCCTCTCATCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GKTGGDSQGPLDLEERRQKLSTI*ILSSSS Trigger: AGAGGATGATGAGAGGATCCATATGGTGGACAACTT...CTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR TCA 90 bp | CCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCATCATCCTCTGAGGTaGAAAGCAGGCTCCGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: PNSRVPSRTLQCGQGASQHHPLR*KAGSGI Trigger: AATTCCGGAGCCTGCTTTTCACCTCAGAGGATGATG...CTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR GCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTCCATGTCGCGCTTCTTaGCCCAGTGGAAGTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YVGGFGGWVGTKGDHIEAPCRAS*PSGSGA Trigger: AGCTCCACTTCCACTGGGGCAAGAAGCGCGACATGG...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR CCA 90 bp | TGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTAATTATTGCTTGATATTGATGGGTGACTaGCGGTCTCCCTGGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: CRRGNAEWAALPTSNYCLILMGD*RSPWAM Trigger: CATTGCCCAGGGAGACCGCCAGTCACCCATCAATAT...CAAGCAATAATTAGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTGGAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGAAGTGCTGTACTTCTTaGCGTTCCAGTGAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSWRVPPTQGFHQEPFNVKCCTS*RSSEPD Trigger: ATCTGGTTCACTGGAACGCCAAGAAGTACAGCACTT...CACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTCCAGCTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR GCA 90 bp | TTATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTCAGGCCTGGAAGGATaGTTTGACCACTCGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCRWLWWLGRNKGRSYRSSGLEG*FDHSAL Trigger: AAGGGCCGAGTGGTCAAAGCATCCTTCCAGGCCTGA...GCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCTTGAAGCAGCTGAACTaGGCCTTGGTGTCCTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GYPQLKGSIKNPSMWSRSLKQLN*ALVSLN Trigger: ATTTAAGGACACCAAGGCCCAGTTCAGCTGCTTCAA...GCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGTTGTCCACCATATaGATCCTCTCATCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GYPQLKGSIKNPSMWSRSKLSTI*ILSSSS Trigger: AGAGGATGATGAGAGGATCCATATGGTGGACAACTT...GCTCCTTGACCACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR TCA 90 bp | TTATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTGTCATCACTGTCATTaGAGTCCACCTGGACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCRWLWWLGRNKGRSYRSCHHCH*SPPGQS Trigger: ACTCTGTCCAGGTGGACTTCAATGACAGTGATGACA...GCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAAATCATTGAAGTCCACCTaGACAGAGTGGCCATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGFGGWVGTKGDHIEAKSLKST*TEWPLL Trigger: CAACAATGGCCACTCTGTCCAGGTGGACTTCAATGA...TTTAGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | TATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAAGTGCTGTACTTCTTaGCGTTCCAGTGAACCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YVGGFGGWVGTKGDHIEAKCCTS*RSSEPD Trigger: ATCTGGTTCACTGGAACGCCAAGAAGTACAGCACTT...AGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CCA 90 bp | TTATGTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTTGAAGCAGCTGAACTaGGCCTTGGTGTCCTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LCRWLWWLGRNKGRSYRSLKQLN*ALVSLN Trigger: ATTTAAGGACACCAAGGCCCAGTTCAGCTGCTTCAA...GCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CAA 90 bp | GCCAGGGCCTGCCCGTGGCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCTGTGGTGGCCGGAAGTaGTCCACCATATGGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARACPWQQMTGGGHIASSCGGRK*STIWIL Trigger: GAGGATCCATATGGTGGACAACTTCCGGCCACCACA...GCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGCCACGGGCAGGCCCTGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGCCCATGTCGCGCTTCTaGCCCCAGTGGAAGTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GKTGGDSQGPLDLEERRQPMSRF*PQWKWS Trigger: GCTCCACTTCCACTGGGGCAAGAAGCGCGACATGGG...CTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCAGATGACTGGAGGGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTATCGCTGGGGAAGGACTaGCCGTCCACTGTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AADDWRGPHRLQRLGAIVSLGKD*PSTVCS Trigger: AGAGCACACAGTGGACGGCAAGTCCTTCCCCAGCGA...TACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCCCTCCAGTCATCTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGAGCAGGCACTTGGGGTaGAAGCAGCTGAACTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKTGGDSQGPLDLEERRQSRHLG*KQLNWA Trigger: GGCCCAGTTCAGCTGCTTCAACCCCAAGTGCCTGCT...CTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTGTTCTTCCAGCGCCTGGAAGGATGCTTaGACCACTCGGCCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGTEAAQVWTLLSSCSSSAWKDA*TTRPFS Trigger: GCTGAAGGGCCGAGTGGTCAAAGCATCCTTCCAGGC...GCTGGAAGAACAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAGACAGGAGGAGATTCTCAGGGGCCTTTGGATCTGGAGGAACGGAGGCAGACAGCTTGTGCCAATTaGAAGGGCCGTCGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GKTGGDSQGPLDLEERRQTACAN*KGRRPG Trigger: GCCAGGACGACGGCCCTTCAAATTGGCACAAGCTGT...CTGCCTCCGTTCCTCCAGATCCAAAGGCCCCTGAGAATCTCCTCCTGTCTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
||
| CDS-3UTR CAA 90 bp | CATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCATCGCTGGGGAAGGACTaGCCGTCCACTGTGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVWQRPAEEVMQSGQLCPSLGKD*PSTVCS Trigger: AGAGCACACAGTGGACGGCAAGTCCTTCCCCAGCGA...TGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CAA 90 bp | CCTTTGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTAGCAGGCACTTGGGGTaGAAGCAGCTGAACTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PLDLEERRQPRFGLCSVPSRHLG*KQLNWA Trigger: GGCCCAGTTCAGCTGCTTCAACCCCAAGTGCCTGCT...AGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
||
| CDS-3UTR CAA 90 bp | GGGGCCACATCGCCTCCAGCGTCTGGGTGCTATTGTAATGGCCTGGCAGTGAGGCTGTCATCACTGTCATaGAAGTCCACCTGGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: GATSPPASGCYCNGLAVRLSSLS*KSTWTE Trigger: CTCTGTCCAGGTGGACTTCAATGACAGTGATGACAG...CCTCACTGCCAGGCCATTACAATAGCACCCAGACGCTGGAGGCGATGTGGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGTGCATGTATGGCAGAGGCCTGCAGAAGAGGTAATGCAGAGTGGGCAGGCCTGGAAGGATGCTTaGACCACTCGGCCCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: SEVHVWQRPAEEVMQSGQAWKDA*TTRPFS Trigger: GCTGAAGGGCCGAGTGGTCAAAGCATCCTTCCAGGC...CTGCCCACTCTGCATTACCTCTTCTGCAGGCCTCTGCCATACATGCACCTCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR CAA 90 bp | CCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCTGAAGGAGGGCCGTGCCTGGAAGGATGCTTaGACCACTCGGCCCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: PSRTLQCGQGASQLKEGRAWKDA*TTRPFS Trigger: GCTGAAGGGCCGAGTGGTCAAAGCATCCTTCCAGGC...ACGGCCCTCCTTCAGCTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS TCA 90 bp | CAGGCTGGGCGAGTACACAGCCTGGCTGGATATGATATTGATGGGTaGCTGGCGGTCTCCCTGGGCAATGGGATACAGCTTGTGCCAATT | + |
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Preference number: 5 (lower is better) Translates to: QAGRVHSLAGYDIDG*LAVSLGNGIQLVPI Trigger: AATTGGCACAAGCTGTATCCCATTGCCCAGGGAGACCGCCAGTCACCCATCAATATCATATCCAGCCAGGCTGTGTACTCGCCCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
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| CDS-3UTR CAA 90 bp | TTTGGATCTGGAGGAACGGAGGCAGCCCAGGTTTGGACTCTGCTCAGTTCCTGTTGTGGTGGCCGGAAGTaGTCCACCATATGGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: FGSGGTEAAQVWTLLSSCCGGRK*STIWIL Trigger: GAGGATCCATATGGTGGACAACTTCCGGCCACCACA...ACAGGAACTGAGCAGAGTCCAAACCTGGGCTGCCTCCGTTCCTCCAGATCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR CAA 90 bp | TGCAGAAGAGGTAATGCAGAGTGGGCAGCTCTGCCCACCTCTAATTATTGCTTGTCGCTGGGGAAGGACTaGCCGTCCACTGTGTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: CRRGNAEWAALPTSNYCLSLGKD*PSTVCS Trigger: AGAGCACACAGTGGACGGCAAGTCCTTCCCCAGCGA...CAAGCAATAATTAGAGGTGGGCAGAGCTGCCCACTCTGCATTACCTCTTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS TCA 90 bp | GCCGGAAGTTGTCCACCATATGGATCCTCTCATCATCCTCTGAGGTaGAAAGCAGGCTCCGGAATTTCTCCATCTGCCTCTCGGAGATCC | + |
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Preference number: 5 (lower is better) Translates to: AGSCPPYGSSHHPLR*KAGSGISPSASRRS Trigger: GGATCTCCGAGAGGCAGATGGAGAAATTCCGGAGCCTGCTTTTCACCTCAGAGGATGATGAGAGGATCCATATGGTGGACAACTTCCGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS CCA 90 bp | CTGGGCGAGTACACAGCCTGGCTGGATATGATATTGATGGGTGACTaGCGGTCTCCCTGGGCAATGGGATACAGCTTGTGCCAATTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LGEYTAWLDMILMGD*RSPWAMGYSLCQFE Trigger: TTCAAATTGGCACAAGCTGTATCCCATTGCCCAGGGAGACCGCCAGTCACCCATCAATATCATATCCAGCCAGGCTGTGTACTCGCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
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| CDS CCA 90 bp | GTTGGTGATGCTGAGGGACATGCAGGCCTCATAGAAAAGTTCCAGTaGCTGCAGGCTGGGCGAGTACACAGCCTGGCTGGATATGATATT | + |
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Preference number: 5 (lower is better) Translates to: VGDAEGHAGLIEKFQ*LQAGRVHSLAGYDI Trigger: AATATCATATCCAGCCAGGCTGTGTACTCGCCCAGCCTGCAGCCACTGGAACTTTTCTATGAGGCCTGCATGTCCCTCAGCATCACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
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| CDS-3UTR CAA 90 bp | GGCAGCTGGAGGGTACCCCCAACTCAAGGGTTCCATCAAGAACCCTTCAATGTGCTGTCATCACTGTCATaGAAGTCCACCTGGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: GSWRVPPTQGFHQEPFNVLSSLS*KSTWTE Trigger: CTCTGTCCAGGTGGACTTCAATGACAGTGATGACAG...CACATTGAAGGGTTCTTGATGGAACCCTTGAGTTGGGGGTACCCTCCAGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR CAA 90 bp | CCATCAAGAACCCTTCAATGTGGTCAAGGAGCAAGCCAGCTGAAGGAGGGCCGTCTGTCATCACTGTCATaGAAGTCCACCTGGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: PSRTLQCGQGASQLKEGRLSSLS*KSTWTE Trigger: CTCTGTCCAGGTGGACTTCAATGACAGTGATGACAG...ACGGCCCTCCTTCAGCTGGCTTGCTCCTTGACCACATTGAAGGGTTCTTGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR CAA 90 bp | GTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAAAAGCAGGCACTTGGGGTaGAAGCAGCTGAACTGGGCC | + |
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Preference number: 5 (lower is better) Translates to: VGGFGGWVGTKGDHIEAKSRHLG*KQLNWA Trigger: GGCCCAGTTCAGCTGCTTCAACCCCAAGTGCCTGCT...TTTAGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS-3UTR CAA 90 bp | GTAGGTGGCTTTGGTGGCTGGGTAGGAACAAAGGGAGATCATATAGAAGCTAAATGTGGTGGCCGGAAGTaGTCCACCATATGGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: VGGFGGWVGTKGDHIEAKCGGRK*STIWIL Trigger: GAGGATCCATATGGTGGACAACTTCCGGCCACCACA...TTTAGCTTCTATATGATCTCCCTTTGTTCCTACCCAGCCACCAAAGCCACCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS GCA 72 bp | TCCAGTGAACCAGATGTAGCTCGCTGGGGAAGGACTTaGCGTCCACTGTGTGCTCTGAGCCCATGTCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: SSEPDVARWGRT*RPLCALSPCRA Trigger: AGCGCGACATGGGCTCAGAGCACACAGTGGACGGCAAGTCCTTCCCCAGCGAGCTACATCTGGTTCACTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS CCA 72 bp | GGATGCTTTGACCACTCGGCCCTTCAGCGGCTGTGGTaGCCGGAAGTTGTCCACCATATGGATCCTCTCATC | + |
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Preference number: 6 (lower is better) Translates to: GCFDHSALQRLW*PEVVHHMDPLI Trigger: GATGAGAGGATCCATATGGTGGACAACTTCCGGCCACCACAGCCGCTGAAGGGCCGAGTGGTCAAAGCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS CAA 72 bp | GGGCCCCCAGACACCACGGTTCTGTCATCACTGTCATaGAAGTCCACCTGGACAGAGTGGCCATTGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: GPPDTTVLSSLS*KSTWTEWPLLV Trigger: CACCAACAATGGCCACTCTGTCCAGGTGGACTTCAATGACAGTGATGACAGAACCGTGGTGTCTGGGGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS CAA 90 bp | GATGCTTTGACCACTCGGCCCTTCAGCGGCTGTGGTGGCCGGAAGTaGTCCACCATATGGATCCTCTCATCATCCTCTGAGGTGAAAAGC | + |
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Preference number: 6 (lower is better) Translates to: DALTTRPFSGCGGRK*STIWILSSSSEVKS Trigger: GCTTTTCACCTCAGAGGATGATGAGAGGATCCATATGGTGGACAACTTCCGGCCACCACAGCCGCTGAAGGGCCGAGTGGTCAAAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056051.11 ENSMUST00000159416.8 ENSMUST00000162761.2 |
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| CDS CCA 72 bp | TACACAGCCTGGCTGGATATGATATTGATGGGTGACTaGCGGTCTCCCTGGGCAATGGGATACAGCTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: YTAWLDMILMGD*RSPWAMGYSLC Trigger: GCACAAGCTGTATCCCATTGCCCAGGGAGACCGCCAGTCACCCATCAATATCATATCCAGCCAGGCTGTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056051.11 |
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