Pregenerated sensors for CAR4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000805Ensembl transcript IDs: ENSMUST00000103194.10, ENSMUST00000108076.3, ENSMUST00000127827.2, ENSMUST00000150596.8
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATACTGTGCTCTGAACCGTTGTCATTCCCATTTGACCAGTGCAGGTaGAACTGTACAGCCTCGTACCGGGCGGGCAGGTCTCCTCCGATA | + |
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Preference number: 1 (lower is better) Translates to: ILCSEPLSFPFDQCR*NCTASYRAGRSPPI Trigger: TATCGGAGGAGACCTGCCCGCCCGGTACGAGGCTGTACAGTTGCACCTGCACTGGTCAAATGGGAATGACAACGGTTCAGAGCACAGTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127827.2 ENSMUST00000150596.8 |
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| 3UTR GCA 90 bp | CCATCAATACTGTGCTCTGAACCGTTGTCATTCCCATTTGACCAGTaGAGGTGCAACTGTACAGCCTCGTACCGGGCGGGCAGGTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: PSILCSEPLSFPFDQ*RCNCTASYRAGRSP Trigger: AGGAGACCTGCCCGCCCGGTACGAGGCTGTACAGTTGCACCTGCACTGGTCAAATGGGAATGACAACGGTTCAGAGCACAGTATTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127827.2 ENSMUST00000150596.8 |
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| 3UTR GCA 90 bp | TGCACGATGTGCATCTCCATGGCAAAGTGTCTCCCATCAATACTGTaGTCTGAACCGTTGTCATTCCCATTTGACCAGTGCAGGTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: CTMCISMAKCLPSIL*SEPLSFPFDQCRCN Trigger: GTTGCACCTGCACTGGTCAAATGGGAATGACAACGGTTCAGAGCACAGTATTGATGGGAGACACTTTGCCATGGAGATGCACATCGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR GCA 90 bp | TCCTTCGAGTCCTCCTTGCTAGATGTCAACTTCTTGTGCACGATGTaGATCTCCATGGCAAAGTGTCTCCCATCAATACTGTGCTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: SFESSLLDVNFLCTM*ISMAKCLPSILCSE Trigger: TTCAGAGCACAGTATTGATGGGAGACACTTTGCCATGGAGATGCACATCGTGCACAAGAAGTTGACATCTAGCAAGGAGGACTCGAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGCAGGTGCAACTGTACAGCCTCGTACCGGGCGGGCAGGTCTCCTCCGATCATAGCCGACGAGGATaGAGGGTGTCAGTCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PVQVQLYSLVPGGQVSSDHSRRG*RVSVWG Trigger: ACCCCAGACTGACACCCTTCATCCTCGTCGGCTATG...ATCGGAGGAGACCTGCCCGCCCGGTACGAGGCTGTACAGTTGCACCTGCACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000127827.2 ENSMUST00000150596.8 |
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| 3UTR-3UTR TCA 90 bp | CACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTATGTCCTCTAAAGGCTaGGGTCAGAGGTCAGATATC | + |
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Preference number: 2 (lower is better) Translates to: HPPSTPKAGIKGVHTTASMSSKG*GQRSDI Trigger: GATATCTGACCTCTGACCTCAGCCTTTAGAGGACAT...ACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| 3UTR CAA 90 bp | AGTGTCTCCCATCAATACTGTGCTCTGAACCGTTGTCATTCCCATTaGACCAGTGCAGGTGCAACTGTACAGCCTCGTACCGGGCGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SVSHQYCALNRCHSH*TSAGATVQPRTGRA Trigger: TGCCCGCCCGGTACGAGGCTGTACAGTTGCACCTGCACTGGTCAAATGGGAATGACAACGGTTCAGAGCACAGTATTGATGGGAGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127827.2 ENSMUST00000150596.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATATGTCCTCTAAAGGCTaGGGTCAGAGGTCAGATATC | + |
|
Preference number: 2 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHMSSKG*GQRSDI Trigger: GATATCTGACCTCTGACCTCAGCCTTTAGAGGACAT...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| 3UTR-3UTR TCA 90 bp | TTCCCATTTGACCAGTGCAGGTGCAACTGTACAGCCTCGTACCGGGCGGGCAGGATCTCCACTGTGTGTTaGTTGTTCTTAATTGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: FPFDQCRCNCTASYRAGRISTVC*LFLIGH Trigger: GTGGCCAATTAAGAACAATCAACACACAGTGGAGAT...CCTGCCCGCCCGGTACGAGGCTGTACAGTTGCACCTGCACTGGTCAAATGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127827.2 ENSMUST00000150596.8 |
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| 3UTR CAA 90 bp | ATCTCCATGGCAAAGTGTCTCCCATCAATACTGTGCTCTGAACCGTaGTCATTCCCATTTGACCAGTGCAGGTGCAACTGTACAGCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: ISMAKCLPSILCSEP*SFPFDQCRCNCTAS Trigger: CGAGGCTGTACAGTTGCACCTGCACTGGTCAAATGGGAATGACAACGGTTCAGAGCACAGTATTGATGGGAGACACTTTGCCATGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCCTTGCTAGATGTCAACTTCTTGTGCACGATGTGCATCTCCATGGCAAATTTGACCAGTGCAGGTaGAACTGTACAGCCTCGTAC | + |
|
Preference number: 2 (lower is better) Translates to: VLLARCQLLVHDVHLHGKFDQCR*NCTASY Trigger: GTACGAGGCTGTACAGTTGCACCTGCACTGGTCAAA...TTTGCCATGGAGATGCACATCGTGCACAAGAAGTTGACATCTAGCAAGGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACTGCAAACTTGTCCTTCGAGTCCTCCTTGCTAGATGTCAACTTCTTGTGCATCTCCACTGTGTGTTaGTTGTTCTTAATTGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: STANLSFESSLLDVNFLCISTVC*LFLIGH Trigger: GTGGCCAATTAAGAACAATCAACACACAGTGGAGAT...GCACAAGAAGTTGACATCTAGCAAGGAGGACTCGAAGGACAAGTTTGCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR GCA 72 bp | TCTGAACCGTTGTCATTCCCATTTGACCAGTGCAGGTaGAACTGTACAGCCTCGTACCGGGCGGGCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: SEPLSFPFDQCR*NCTASYRAGRS Trigger: AGACCTGCCCGCCCGGTACGAGGCTGTACAGTTGCACCTGCACTGGTCAAATGGGAATGACAACGGTTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127827.2 ENSMUST00000150596.8 |
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| 3UTR GCA 72 bp | ACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTaGACACCACAGCCAGTTCCTCATATTTTAATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TLPPPPRLGLKV*TPQPVPHILIV Trigger: GACTATTAAAATATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTACCTCAATCATAAATGCCAGCACTGCAAACTTGTCCTTCGAGTCCTCCCGTTGTCATTCCCATTaGACCAGTGCAGGTGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: SPTSIINASTANLSFESSRCHSH*TSAGAT Trigger: AGTTGCACCTGCACTGGTCAAATGGGAATGACAACG...GGAGGACTCGAAGGACAAGTTTGCAGTGCTGGCATTTATGATTGAGGTAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR GCA 72 bp | TGCATCTCCATGGCAAAGTGTCTCCCATCAATACTGTaGTCTGAACCGTTGTCATTCCCATTTGACCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CISMAKCLPSIL*SEPLSFPFDQC Trigger: GCACTGGTCAAATGGGAATGACAACGGTTCAGAGCACAGTATTGATGGGAGACACTTTGCCATGGAGATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR-3UTR CAA 90 bp | GAGTCCTCCTTGCTAGATGTCAACTTCTTGTGCACGATGTGCATCTCCATGGCACATCTCCACTGTGTGTaGATTGTTCTTAATTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ESSLLDVNFLCTMCISMAHLHCV*IVLNWP Trigger: TGGCCAATTAAGAACAATCAACACACAGTGGAGATG...TGCCATGGAGATGCACATCGTGCACAAGAAGTTGACATCTAGCAAGGAGGACTC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR GCA 72 bp | CACCTTGTCTCCTACCTCAATCATAAATGCCAGCACTaGAAACTTGTCCTTCGAGTCCTCCTTGCTAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: HLVSYLNHKCQH*KLVLRVLLARC Trigger: ACATCTAGCAAGGAGGACTCGAAGGACAAGTTTGCAGTGCTGGCATTTATGATTGAGGTAGGAGACAAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| CDS-3UTR TCA 90 bp | CACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTGGCTACCAGGCAGGTaGGTGTGGGGACCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPPSTPKAGIKGVHTTASWLPGR*VWGPTE Trigger: CTCTGTTGGTCCCCACACTCACCTGCCTGGTAGCCA...ACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTGGGGACCAACAGAGTaGGCAGGGGCAAAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: PPSTPKAGIKGVHTTASSWGPTE*AGAKTA Trigger: TGCTGTCTTTGCCCCTGCCCACTCTGTTGGTCCCCA...GGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR TCA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATTGGCTACCAGGCAGGTaGGTGTGGGGACCAACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHWLPGR*VWGPTE Trigger: CTCTGTTGGTCCCCACACTCACCTGCCTGGTAGCCA...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | CCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCAGACAGCAGCTGTCCTaGGGCATGGGACTTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: PPSTPKAGIKGVHTTASSRQQLS*GMGLEH Trigger: GTGTTCAAGTCCCATGCCCCAGGACAGCTGCTGTCT...GGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR GCA 90 bp | CTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTGGGGGAAGCATGTCCTaGAAACTGCTCTCCCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LPPPPRLGLKVCTPQPVPGGSMS*KLLSLT Trigger: AGTGAGGGAGAGCAGTTTGCAGGACATGCTTCCCCC...AGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR CCA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATTGGGACTTGAACACCTaGCGTTTTCCCAGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHWDLNT*RFPSGC Trigger: GCAGCCGCTGGGAAAACGCCAGGTGTTCAAGTCCCA...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | ACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTAGACAGCAGCTGTCCTaGGGCATGGGACTTGAACAC | + |
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Preference number: 4 (lower is better) Translates to: TLPPPPRLGLKVCTPQPVRQQLS*GMGLEH Trigger: GTGTTCAAGTCCCATGCCCCAGGACAGCTGCTGTCT...AACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR GCA 90 bp | CCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTTTGACCAGTGCAGGTaGAACTGTACAGCCTCGTAC | + |
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Preference number: 4 (lower is better) Translates to: PPSTPKAGIKGVHTTASSFDQCR*NCTASY Trigger: GTACGAGGCTGTACAGTTGCACCTGCACTGGTCAAA...GGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR GCA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATGCATGTCCTGCAAACTaGTCTCCCTCAGGGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHACPAN*SPSGVW Trigger: CCAAACCCCTGAGGGAGAGCAGTTTGCAGGACATGC...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108076.3 |
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| CDS-3UTR TCA 90 bp | CCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCCCTCACTGTAGAGGTTaGATGGGGTTTGGAGATACT | + |
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Preference number: 4 (lower is better) Translates to: PPSTPKAGIKGVHTTASSPHCRG*MGFGDT Trigger: AGTATCTCCAAACCCCATTCAACCTCTACAGTGAGG...GGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR CCA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATTCTCCCTCAGGGGTTTaGAGATACTGGGCAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHSPSGV*RYWAVL Trigger: AAGCACTGCCCAGTATCTCCAAACCCCTGAGGGAGA...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108076.3 |
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| CDS-3UTR TCA 90 bp | CACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTGTACACAGTCCAGATaGCAGTCTCATCACAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPPSTPKAGIKGVHTTASCTQSR*QSHHSL Trigger: CAAACTGTGATGAGACTGTCATCTGGACTGTGTACA...ACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR GCA 90 bp | CCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCGATGTCAACTTCTTGTaGACGATGTGCATCTCCATG | + |
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Preference number: 4 (lower is better) Translates to: PPSTPKAGIKGVHTTASSDVNFL*TMCISM Trigger: CATGGAGATGCACATCGTGCACAAGAAGTTGACATC...GGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR GCA 90 bp | CCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCCATAAATGCCAGCACTaGAAACTTGTCCTTCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: PPSTPKAGIKGVHTTASSHKCQH*KLVLRV Trigger: GACTCGAAGGACAAGTTTGCAGTGCTGGCATTTATG...GGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATCGATGTGCATCTCCATaGCAAAGTGTCTCCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHRCASP*QSVSHQ Trigger: TTGATGGGAGACACTTTGCCATGGAGATGCACATCG...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR TCA 90 bp | CTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTATCTCCACTGTGTGTTaGTTGTTCTTAATTGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LPPPPRLGLKVCTPQPVPISTVC*LFLIGH Trigger: GTGGCCAATTAAGAACAATCAACACACAGTGGAGAT...AGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR TCA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATTGTACACAGTCCAGATaGCAGTCTCATCACAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHCTQSR*QSHHSL Trigger: CAAACTGTGATGAGACTGTCATCTGGACTGTGTACA...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR TCA 90 bp | CTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTGGTTTTTGTGGATCTTaGTGGGTTGTTTGTACACAG | + |
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Preference number: 4 (lower is better) Translates to: LPPPPRLGLKVCTPQPVPGFCGS*WVVCTQ Trigger: CTGTGTACAAACAACCCATCAAGATCCACAAAAACC...AGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | CACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTAGGAACTGGTTTTTGTaGATCTTGATGGGTTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: HPPSTPKAGIKGVHTTASRNWFL*ILMGCL Trigger: CAAACAACCCATCAAGATCCACAAAAACCAGTTCCT...ACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | ACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTGAGAATTCCAGGAACTaGTTTTTGTGGATCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: TLPPPPRLGLKVCTPQPVENSRN*FLWILM Trigger: CATCAAGATCCACAAAAACCAGTTCCTGGAATTCTC...AACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR TCA 90 bp | GTGTGCACACCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTCATAGCCGACGAGGATaGAGGGTGTCAGTCTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: VCTPQPVPHILIVPKVQPHSRRG*RVSVWG Trigger: ACCCCAGACTGACACCCTTCATCCTCGTCGGCTATG...AGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGGTGTGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR CCA 90 bp | ACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTTTGATTGTTCTTAATTaGCCACTGTTGCTTTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: TLPPPPRLGLKVCTPQPVLIVLN*PLLLLV Trigger: GACCAAAAGCAACAGTGGCCAATTAAGAACAATCAA...AACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR CCA 90 bp | GTGTGCACACCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTTGGGACTTGAACACCTaGCGTTTTCCCAGCGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VCTPQPVPHILIVPKVQPWDLNT*RFPSGC Trigger: GCAGCCGCTGGGAAAACGCCAGGTGTTCAAGTCCCA...AGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGGTGTGCACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| 3UTR CAA 72 bp | CATCAATACTGTGCTCTGAACCGTTGTCATTCCCATTaGACCAGTGCAGGTGCAACTGTACAGCCTCGTACC | + |
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Preference number: 4 (lower is better) Translates to: HQYCALNRCHSH*TSAGATVQPRT Trigger: GGTACGAGGCTGTACAGTTGCACCTGCACTGGTCAAATGGGAATGACAACGGTTCAGAGCACAGTATTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000127827.2 ENSMUST00000150596.8 |
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| 3UTR CAA 72 bp | GCAAAGTGTCTCCCATCAATACTGTGCTCTGAACCGTaGTCATTCCCATTTGACCAGTGCAGGTGCAACTGT | + |
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Preference number: 4 (lower is better) Translates to: AKCLPSILCSEP*SFPFDQCRCNC Trigger: ACAGTTGCACCTGCACTGGTCAAATGGGAATGACAACGGTTCAGAGCACAGTATTGATGGGAGACACTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| 3UTR CAA 72 bp | AATGCCAGCACTGCAAACTTGTCCTTCGAGTCCTCCTaGCTAGATGTCAACTTCTTGTGCACGATGTGCATC | + |
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Preference number: 4 (lower is better) Translates to: NASTANLSFESS*LDVNFLCTMCI Trigger: GATGCACATCGTGCACAAGAAGTTGACATCTAGCAAGGAGGACTCGAAGGACAAGTTTGCAGTGCTGGCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150596.8 |
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| CDS-3UTR GCA 90 bp | CCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTGGAAAGATTGGGGGAAGCATGTCCTaGAAACTGCTCTCCCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: PQPVPHILIVPKVQPGKIGGSMS*KLLSLR Trigger: CCTGAGGGAGAGCAGTTTGCAGGACATGCTTCCCCC...AATCTTTCCAGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | CCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTGGAAAGATTTGGGGACCAACAGAGTaGGCAGGGGCAAAGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQPVPHILIVPKVQPGKIWGPTE*AGAKTA Trigger: TGCTGTCTTTGCCCCTGCCCACTCTGTTGGTCCCCA...AATCTTTCCAGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR GCA 90 bp | GTGTGCACACCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTCATAAATGCCAGCACTaGAAACTTGTCCTTCGAGTC | + |
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Preference number: 4 (lower is better) Translates to: VCTPQPVPHILIVPKVQPHKCQH*KLVLRV Trigger: GACTCGAAGGACAAGTTTGCAGTGCTGGCATTTATG...AGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGGTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | GTGTGCACACCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTCATCACAGTTTGGTGTaGTTAGTGAGCCATTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VCTPQPVPHILIVPKVQPHHSLV*LVSHCN Trigger: GTTACAATGGCTCACTAACCACACCAAACTGTGATG...AGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGGTGTGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR TCA 90 bp | CCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTGGAAAGATTGGTTTTTGTGGATCTTaGTGGGTTGTTTGTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: PQPVPHILIVPKVQPGKIGFCGS*WVVCTQ Trigger: CTGTGTACAAACAACCCATCAAGATCCACAAAAACC...AATCTTTCCAGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | CCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTGGAAAGATTCATCACAGTTTGGTGTaGTTAGTGAGCCATTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PQPVPHILIVPKVQPGKIHHSLV*LVSHCN Trigger: GTTACAATGGCTCACTAACCACACCAAACTGTGATG...AATCTTTCCAGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CCA 90 bp | CCACAGCCAGTTCCTCATATTTTAATAGTCCCCAAAGTTCAACCTGGAAAGATTGAGAATTCCAGGAACTaGTTTTTGTGGATCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PQPVPHILIVPKVQPGKIENSRN*FLWILM Trigger: CATCAAGATCCACAAAAACCAGTTCCTGGAATTCTC...AATCTTTCCAGGTTGAACTTTGGGGACTATTAAAATATGAGGAACTGGCTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | CACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTCTCTCCCTCAGGGGTTaGGAGATACTGGGCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HPPSTPKAGIKGVHTTASLSLRG*EILGSA Trigger: AGCACTGCCCAGTATCTCCAAACCCCTGAGGGAGAG...ACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | ACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTGAGGTTGAATGGGGTTaGGAGATACTGGGCAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLPPPPRLGLKVCTPQPVEVEWG*EILGSA Trigger: AGCACTGCCCAGTATCTCCAAACCCCATTCAACCTC...AACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR CAA 90 bp | CACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTGCAGGGGCCTCACATaGTCCTTCATGTTCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: HPPSTPKAGIKGVHTTASCRGLT*SFMFNF Trigger: GAAGTTGAACATGAAGGACAATGTGAGGCCCCTGCA...ACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTGCAGGGGCCTCACATaGTCCTTCATGTTCAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPSTPKAGIKGVHTTASSCRGLT*SFMFNF Trigger: GAAGTTGAACATGAAGGACAATGTGAGGCCCCTGCA...GGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | ACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCGTTGTCATTCCCATTaGACCAGTGCAGGTGCAACT | + |
|
Preference number: 5 (lower is better) Translates to: TLPPPPRLGLKVCTPQPVRCHSH*TSAGAT Trigger: AGTTGCACCTGCACTGGTCAAATGGGAATGACAACG...AACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS TCA 90 bp | GGGTTCACCTTTGTCCTAGCAGTGACAATGTTGATGGGGGACTGCTaGTTCTCCTTACAGGCTCCAGGCCACTTCTCAGGCCCCAAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GFTFVLAVTMLMGDC*FSLQAPGHFSGPKQ Trigger: TTGCTTGGGGCCTGAGAAGTGGCCTGGAGCCTGTAAGGAGAATCAGCAGTCCCCCATCAACATTGTCACTGCTAGGACAAAGGTGAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS-3UTR CAA 90 bp | CTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCAGTCTCATCACAGTTaGGTGTGGTTAGTGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LPPPPRLGLKVCTPQPVPQSHHS*VWLVSH Trigger: ATGGCTCACTAACCACACCAAACTGTGATGAGACTG...AGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATCAGTCTCATCACAGTTaGGTGTGGTTAGTGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHQSHHS*VWLVSH Trigger: ATGGCTCACTAACCACACCAAACTGTGATGAGACTG...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | CCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCATCTTGATGGGTTGTTaGTACACAGTCCAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: PPSTPKAGIKGVHTTASSILMGC*YTVQMT Trigger: TGTCATCTGGACTGTGTACAAACAACCCATCAAGAT...GGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | ACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTATCTTGATGGGTTGTTaGTACACAGTCCAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: TLPPPPRLGLKVCTPQPVILMGC*YTVQMT Trigger: TGTCATCTGGACTGTGTACAAACAACCCATCAAGAT...AACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | CCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCCTCATCATCTCCACTGTGTGTaGATTGTTCTTAATTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPPPRLGLKVCTPQPVPHHLHCV*IVLNWP Trigger: TGGCCAATTAAGAACAATCAACACACAGTGGAGATG...ATGAGGAACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS GCA 90 bp | GGGCTGGAAGCCCTTGTTCACCTTGTCTCCTACCTCAATCATAAATaGCAGCACTGCAAACTTGTCCTTCGAGTCCTCCTTGCTAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GLEALVHLVSYLNHK*QHCKLVLRVLLARC Trigger: ACATCTAGCAAGGAGGACTCGAAGGACAAGTTTGCAGTGCTGGCATTTATGATTGAGGTAGGAGACAAGGTGAACAAGGGCTTCCAGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS-3UTR CAA 90 bp | ACCCTCCCTCCACCCCCAAGGCTGGGATTAAAGGTGTGCACACCACAGCCAGTTCATAGTACAGATTTTTaGAGAATTCCAGGAACTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TLPPPPRLGLKVCTPQPVHSTDF*RIPGTG Trigger: ACCAGTTCCTGGAATTCTCAAAAAATCTGTACTATG...AACTGGCTGTGGTGTGCACACCTTTAATCCCAGCCTTGGGGGTGGAGGGAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS CCA 72 bp | CAACAGAGTGGGCAGGGGCAAAGACAGCAGCTGTCCTaGGGCATGGGACTTGAACACCTGGCGTTTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QQSGQGQRQQLS*GMGLEHLAFSQ Trigger: CTGGGAAAACGCCAGGTGTTCAAGTCCCATGCCCCAGGACAGCTGCTGTCTTTGCCCCTGCCCACTCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS CCA 72 bp | CCTGCAAACTGCTCTCCCTCAGGGGTTTGGAGATACTaGGCAGTGCTTCCACCAGGGGCTGGAAGCCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PANCSPSGVWRY*AVLPPGAGSPC Trigger: ACAAGGGCTTCCAGCCCCTGGTGGAAGCACTGCCCAGTATCTCCAAACCCCTGAGGGAGAGCAGTTTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108076.3 |
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| CDS CAA 72 bp | GGAAGCATGTCCTGCAAACTGCTCTCCCTCAGGGGTTaGGAGATACTGGGCAGTGCTTCCACCAGGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSMSCKLLSLRG*EILGSASTRGW Trigger: CCAGCCCCTGGTGGAAGCACTGCCCAGTATCTCCAAACCCCTGAGGGAGAGCAGTTTGCAGGACATGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108076.3 |
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| CDS CCA 72 bp | GAAGCATGTCCTGCAAACTGCTCTCCCTCAGGGGTTTaGAGATACTGGGCAGTGCTTCCACCAGGGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: EACPANCSPSGV*RYWAVLPPGAG Trigger: TCCAGCCCCTGGTGGAAGCACTGCCCAGTATCTCCAAACCCCTGAGGGAGAGCAGTTTGCAGGACATGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108076.3 |
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| CDS CAA 90 bp | ATGTCCTGCAAACTGCTCTCCCTCACTGTAGAGGTTGAATGGGGTTaGGAGATACTGGGCAGTGCTTCCACCAGGGGCTGGAAGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MSCKLLSLTVEVEWG*EILGSASTRGWKPL Trigger: CAAGGGCTTCCAGCCCCTGGTGGAAGCACTGCCCAGTATCTCCAAACCCCATTCAACCTCTACAGTGAGGGAGAGCAGTTTGCAGGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS GCA 72 bp | GCATGGGACTTGAACACCTGGCGTTTTCCCAGCGGCTaGAGGGGCCTCACATTGTCCTTCATGTTCAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: AWDLNTWRFPSG*RGLTLSFMFNF Trigger: GAAGTTGAACATGAAGGACAATGTGAGGCCCCTGCAGCCGCTGGGAAAACGCCAGGTGTTCAAGTCCCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS CAA 72 bp | AAACTGCTCTCCCTCACTGTAGAGGTTGAATGGGGTTaGGAGATACTGGGCAGTGCTTCCACCAGGGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: KLLSLTVEVEWG*EILGSASTRGW Trigger: CCAGCCCCTGGTGGAAGCACTGCCCAGTATCTCCAAACCCCATTCAACCTCTACAGTGAGGGAGAGCAGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS CCA 72 bp | TCCTGCAAACTGCTCTCCCTCACTGTAGAGGTTGAATaGGGTTTGGAGATACTGGGCAGTGCTTCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SCKLLSLTVEVE*GLEILGSASTR Trigger: CCTGGTGGAAGCACTGCCCAGTATCTCCAAACCCCATTCAACCTCTACAGTGAGGGAGAGCAGTTTGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS TCA 72 bp | CATGTCCTGCAAACTGCTCTCCCTCACTGTAGAGGTTaGATGGGGTTTGGAGATACTGGGCAGTGCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: HVLQTALPHCRG*MGFGDTGQCFH Trigger: GTGGAAGCACTGCCCAGTATCTCCAAACCCCATTCAACCTCTACAGTGAGGGAGAGCAGTTTGCAGGACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS CAA 72 bp | AGTGCTTCCACCAGGGGCTGGAAGCCCTTGTTCACCTaGTCTCCTACCTCAATCATAAATGCCAGCACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SASTRGWKPLFT*SPTSIINASTA Trigger: TGCAGTGCTGGCATTTATGATTGAGGTAGGAGACAAGGTGAACAAGGGCTTCCAGCCCCTGGTGGAAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS CAA 90 bp | ATACTGGGCAGTGCTTCCACCAGGGGCTGGAAGCCCTTGTTCACCTaGTCTCCTACCTCAATCATAAATGCCAGCACTGCAAACTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: ILGSASTRGWKPLFT*SPTSIINASTANLS Trigger: GGACAAGTTTGCAGTGCTGGCATTTATGATTGAGGTAGGAGACAAGGTGAACAAGGGCTTCCAGCCCCTGGTGGAAGCACTGCCCAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS GCA 72 bp | GTGAGCCATTGTAACGGAAGTAGGTATACATTTTGGTaGTCGGGGGAAGCATGTCCTGCAAACTGCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSHCNGSRYTFW*SGEACPANCSP Trigger: GGGAGAGCAGTTTGCAGGACATGCTTCCCCCGAGCACCAAAATGTATACCTACTTCCGTTACAATGGCTCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS CAA 90 bp | CATCTCCACTGTGTGTTGATTGTTCTTAATTGGCCACTGTTGCTTTaGGTCATAGCCGACGAGGATGAAGGGTGTCAGTCTGGGGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HLHCVLIVLNWPLLL*VIADEDEGCQSGVH Trigger: GTGAACCCCAGACTGACACCCTTCATCCTCGTCGGCTATGACCAAAAGCAACAGTGGCCAATTAAGAACAATCAACACACAGTGGAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103194.10 |
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| CDS CAA 72 bp | TCCAGGAACTGGTTTTTGTGGATCTTGATGGGTTGTTaGTACACAGTCCAGATGACAGTCTCATCACAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SRNWFLWILMGC*YTVQMTVSSQF Trigger: AAACTGTGATGAGACTGTCATCTGGACTGTGTACAAACAACCCATCAAGATCCACAAAAACCAGTTCCTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS CAA 72 bp | GAATTCCAGGAACTGGTTTTTGTGGATCTTGATGGGTaGTTTGTACACAGTCCAGATGACAGTCTCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: EFQELVFVDLDG*FVHSPDDSLIT Trigger: TGTGATGAGACTGTCATCTGGACTGTGTACAAACAACCCATCAAGATCCACAAAAACCAGTTCCTGGAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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| CDS CAA 90 bp | TTTGAGAATTCCAGGAACTGGTTTTTGTGGATCTTGATGGGTTGTTaGTACACAGTCCAGATGACAGTCTCATCACAGTTTGGTGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FENSRNWFLWILMGC*YTVQMTVSSQFGVV Trigger: AACCACACCAAACTGTGATGAGACTGTCATCTGGACTGTGTACAAACAACCCATCAAGATCCACAAAAACCAGTTCCTGGAATTCTCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103194.10 ENSMUST00000108076.3 |
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