RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CAR15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090236

Ensembl transcript IDs: ENSMUST00000118960.2

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGCTCGGAGCCTTGGTGCCCTGGGCTGCCCCAGTGGAAGTGCAGCTaGAGTAGCCGGTACTCTGGTGACGGGAGCCCAGCCCCTCGGATG +
Preference number: 5 (lower is better)
Translates to: CSEPWCPGLPQWKCS*SSRYSGDGSPAPRM
Trigger: CATCCGAGGGGCTGGGCTCCCGTCACCAGAGTACCGGCTACTGCAGCTGCACTTCCACTGGGGCAGCCCAGGGCACCAAGGCTCCGAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 90 bp AGGCTGTGCTCGGAGCCTTGGTGCCCTGGGCTGCCCCAGTGGAAGTaGAGCTGCAGTAGCCGGTACTCTGGTGACGGGAGCCCAGCCCCT +
Preference number: 5 (lower is better)
Translates to: RLCSEPWCPGLPQWK*SCSSRYSGDGSPAP
Trigger: AGGGGCTGGGCTCCCGTCACCAGAGTACCGGCTACTGCAGCTGCACTTCCACTGGGGCAGCCCAGGGCACCAAGGCTCCGAGCACAGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 90 bp CATGCTTCTCATCCAGGCTGTGCTCGGAGCCTTGGTGCCCTGGGCTaGCCCAGTGGAAGTGCAGCTGCAGTAGCCGGTACTCTGGTGACG +
Preference number: 5 (lower is better)
Translates to: HASHPGCARSLGALG*PSGSAAAVAGTLVT
Trigger: CGTCACCAGAGTACCGGCTACTGCAGCTGCACTTCCACTGGGGCAGCCCAGGGCACCAAGGCTCCGAGCACAGCCTGGATGAGAAGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 90 bp CTGCTGGGGGCGGAAATTACTCGTGAGTGGTCTGGGGTGCAAACCTaGTGGCCCAGTCTGAAGCACGGCCTGGAACTGGACTACCTGCGC +
Preference number: 5 (lower is better)
Translates to: LLGAEITREWSGVQT*WPSLKHGLELDYLR
Trigger: GCGCAGGTAGTCCAGTTCCAGGCCGTGCTTCAGACTGGGCCACCAGGTTTGCACCCCAGACCACTCACGAGTAATTTCCGCCCCCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS TCA 90 bp ATATCCTGCGCCCTCCAAGAGGCTGCTGGGGGCGGAAATTACTCGTaGGTGGTCTGGGGTGCAAACCTGGTGGCCCAGTCTGAAGCACGG +
Preference number: 5 (lower is better)
Translates to: ISCALQEAAGGGNYS*VVWGANLVAQSEAR
Trigger: CCGTGCTTCAGACTGGGCCACCAGGTTTGCACCCCAGACCACTCACGAGTAATTTCCGCCCCCAGCAGCCTCTTGGAGGGCGCAGGATAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 90 bp CTGGGGGCGGAAATTACTCGTGAGTGGTCTGGGGTGCAAACCTGGTaGCCCAGTCTGAAGCACGGCCTGGAACTGGACTACCTGCGCATG +
Preference number: 5 (lower is better)
Translates to: LGAEITREWSGVQTW*PSLKHGLELDYLRM
Trigger: CATGCGCAGGTAGTCCAGTTCCAGGCCGTGCTTCAGACTGGGCCACCAGGTTTGCACCCCAGACCACTCACGAGTAATTTCCGCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 90 bp ACGGATGCTTCGGGAGAGGCTGATATCCTGCGCCCTCCAAGAGGCTaGTGGGGGCGGAAATTACTCGTGAGTGGTCTGGGGTGCAAACCT +
Preference number: 5 (lower is better)
Translates to: TDASGEADILRPPRG*WGRKLLVSGLGCKP
Trigger: AGGTTTGCACCCCAGACCACTCACGAGTAATTTCCGCCCCCAGCAGCCTCTTGGAGGGCGCAGGATATCAGCCTCTCCCGAAGCATCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 90 bp CCCTGCCAGAGTCTCAGGCCAACTCCCAAGCCCACAAGAGCCAGGTaGAAACAGGGCAGGGTAGAGACTGATGATCGGACGGATGCTTCG +
Preference number: 5 (lower is better)
Translates to: PCQSLRPTPKPTRAR*KQGRVETDDRTDAS
Trigger: CGAAGCATCCGTCCGATCATCAGTCTCTACCCTGCCCTGTTTGCACCTGGCTCTTGTGGGCTTGGGAGTTGGCCTGAGACTCTGGCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 90 bp GATGCTTCGGGAGAGGCTGATATCCTGCGCCCTCCAAGAGGCTGCTaGGGGCGGAAATTACTCGTGAGTGGTCTGGGGTGCAAACCTGGT +
Preference number: 5 (lower is better)
Translates to: DASGEADILRPPRGC*GRKLLVSGLGCKPG
Trigger: ACCAGGTTTGCACCCCAGACCACTCACGAGTAATTTCCGCCCCCAGCAGCCTCTTGGAGGGCGCAGGATATCAGCCTCTCCCGAAGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 90 bp TCACAGCTACCCCAGGTGAAGATAAATTTTTCAGGCCAGACACAATaGCAGAGAAATTGGTATTGTCCCTGTCTTCCTCCACCAACAGCA +
Preference number: 5 (lower is better)
Translates to: SQLPQVKINFSGQTQ*QRNWYCPCLPPPTA
Trigger: TGCTGTTGGTGGAGGAAGACAGGGACAATACCAATTTCTCTGCCATTGTGTCTGGCCTGAAAAATTTATCTTCACCTGGGGTAGCTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 72 bp CCTTGGTGCCCTGGGCTGCCCCAGTGGAAGTGCAGCTaGAGTAGCCGGTACTCTGGTGACGGGAGCCCAGCC +
Preference number: 6 (lower is better)
Translates to: PWCPGLPQWKCS*SSRYSGDGSPA
Trigger: GGCTGGGCTCCCGTCACCAGAGTACCGGCTACTGCAGCTGCACTTCCACTGGGGCAGCCCAGGGCACCAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 72 bp TCGGAGCCTTGGTGCCCTGGGCTGCCCCAGTGGAAGTaGAGCTGCAGTAGCCGGTACTCTGGTGACGGGAGC +
Preference number: 6 (lower is better)
Translates to: SEPWCPGLPQWK*SCSSRYSGDGS
Trigger: GCTCCCGTCACCAGAGTACCGGCTACTGCAGCTGCACTTCCACTGGGGCAGCCCAGGGCACCAAGGCTCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 72 bp CTGTGCTCGGAGCCTTGGTGCCCTGGGCTGCCCCAGTaGAAGTGCAGCTGCAGTAGCCGGTACTCTGGTGAC +
Preference number: 6 (lower is better)
Translates to: LCSEPWCPGLPQ*KCSCSSRYSGD
Trigger: GTCACCAGAGTACCGGCTACTGCAGCTGCACTTCCACTGGGGCAGCCCAGGGCACCAAGGCTCCGAGCACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS TCA 72 bp GTGAGTGGTCTGGGGTGCAAACCTGGTGGCCCAGTCTaGAGCACGGCCTGGAACTGGACTACCTGCGCATGC +
Preference number: 6 (lower is better)
Translates to: VSGLGCKPGGPV*STAWNWTTCAC
Trigger: GCATGCGCAGGTAGTCCAGTTCCAGGCCGTGCTTCAGACTGGGCCACCAGGTTTGCACCCCAGACCACTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 72 bp TCGGGAGAGGCTGATATCCTGCGCCCTCCAAGAGGCTaGTGGGGGCGGAAATTACTCGTGAGTGGTCTGGGG +
Preference number: 6 (lower is better)
Translates to: SGEADILRPPRG*WGRKLLVSGLG
Trigger: CCCCAGACCACTCACGAGTAATTTCCGCCCCCAGCAGCCTCTTGGAGGGCGCAGGATATCAGCCTCTCCCGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 72 bp GGAGAGGCTGATATCCTGCGCCCTCCAAGAGGCTGCTaGGGGCGGAAATTACTCGTGAGTGGTCTGGGGTGC +
Preference number: 6 (lower is better)
Translates to: GEADILRPPRGC*GRKLLVSGLGC
Trigger: GCACCCCAGACCACTCACGAGTAATTTCCGCCCCCAGCAGCCTCTTGGAGGGCGCAGGATATCAGCCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 72 bp GCCGGTACTCTGGTGACGGGAGCCCAGCCCCTCGGATaGCTGGGCAGTTCTGCTGACAGGAATTTACTCGAA +
Preference number: 6 (lower is better)
Translates to: AGTLVTGAQPLG*LGSSADRNLLE
Trigger: TTCGAGTAAATTCCTGTCAGCAGAACTGCCCAGCCATCCGAGGGGCTGGGCTCCCGTCACCAGAGTACCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 72 bp ATGATCGGACGGATGCTTCGGGAGAGGCTGATATCCTaGGCCCTCCAAGAGGCTGCTGGGGGCGGAAATTAC +
Preference number: 6 (lower is better)
Translates to: MIGRMLRERLIS*ALQEAAGGGNY
Trigger: GTAATTTCCGCCCCCAGCAGCCTCTTGGAGGGCGCAGGATATCAGCCTCTCCCGAAGCATCCGTCCGATCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 72 bp TCCAAGAGGCTGCTGGGGGCGGAAATTACTCGTGAGTaGTCTGGGGTGCAAACCTGGTGGCCCAGTCTGAAG +
Preference number: 6 (lower is better)
Translates to: SKRLLGAEITRE*SGVQTWWPSLK
Trigger: CTTCAGACTGGGCCACCAGGTTTGCACCCCAGACCACTCACGAGTAATTTCCGCCCCCAGCAGCCTCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 72 bp CAAGAGCCGCAAAGCACTTGGCAGCAGAGAGGCCAGTaGAAAGGTGGACGTCAGATTCACAGCTACCCCAGG +
Preference number: 6 (lower is better)
Translates to: QEPQSTWQQRGQ*KGGRQIHSYPR
Trigger: CCTGGGGTAGCTGTGAATCTGACGTCCACCTTTGCACTGGCCTCTCTGCTGCCAAGTGCTTTGCGGCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 72 bp AGTCTCAGGCCAACTCCCAAGCCCACAAGAGCCAGGTaGAAACAGGGCAGGGTAGAGACTGATGATCGGACG +
Preference number: 6 (lower is better)
Translates to: SLRPTPKPTRAR*KQGRVETDDRT
Trigger: CGTCCGATCATCAGTCTCTACCCTGCCCTGTTTGCACCTGGCTCTTGTGGGCTTGGGAGTTGGCCTGAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 72 bp GCACGGCCTGGAACTGGACTACCTGCGCATGCCCAATaGGTACGGTGTTTTCAAAGACAGTCCAGAGCACCG +
Preference number: 6 (lower is better)
Translates to: ARPGTGLPAHAQ*VRCFQRQSRAP
Trigger: CGGTGCTCTGGACTGTCTTTGAAAACACCGTACCCATTGGGCATGCGCAGGTAGTCCAGTTCCAGGCCGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CAA 72 bp GCACCAGGTACCACTGGAGTCCACCTGTGCCGCCAGTaGTATAAGGAGGAAGCTGAGCAAGAAGTCCAGGGC +
Preference number: 6 (lower is better)
Translates to: APGTTGVHLCRQ*YKEEAEQEVQG
Trigger: GCCCTGGACTTCTTGCTCAGCTTCCTCCTTATACAACTGGCGGCACAGGTGGACTCCAGTGGTACCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CAA 72 bp CAGAGTATCGGTAGTACCGCAAGAGCCGCAAAGCACTaGGCAGCAGAGAGGCCAGTGCAAAGGTGGACGTCA +
Preference number: 6 (lower is better)
Translates to: QSIGSTARAAKH*AAERPVQRWTS
Trigger: TGACGTCCACCTTTGCACTGGCCTCTCTGCTGCCAAGTGCTTTGCGGCTCTTGCGGTACTACCGATACTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS GCA 72 bp GGAGTCGTAGCACCAGGTACCACTGGAGTCCACCTGTaGCGCCAGTTGTATAAGGAGGAAGCTGAGCAAGAA +
Preference number: 6 (lower is better)
Translates to: GVVAPGTTGVHL*RQLYKEEAEQE
Trigger: TTCTTGCTCAGCTTCCTCCTTATACAACTGGCGGCACAGGTGGACTCCAGTGGTACCTGGTGCTACGACTCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 72 bp CTCCACCAACAGCACAGCCAGTATAGCAAACCCATCTaGTTGGCTCCGTGCATCCTCCATGCTCTGGTACTT +
Preference number: 6 (lower is better)
Translates to: LHQQHSQYSKPI*LAPCILHALVL
Trigger: AAGTACCAGAGCATGGAGGATGCACGGAGCCAACCAGATGGGTTTGCTATACTGGCTGTGCTGTTGGTGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CAA 72 bp TTTTTCAGGCCAGACACAATGGCAGAGAAATTGGTATaGTCCCTGTCTTCCTCCACCAACAGCACAGCCAGT +
Preference number: 6 (lower is better)
Translates to: FFRPDTMAEKLV*SLSSSTNSTAS
Trigger: ACTGGCTGTGCTGTTGGTGGAGGAAGACAGGGACAATACCAATTTCTCTGCCATTGTGTCTGGCCTGAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2
CDS CCA 72 bp ATAAATTTTTCAGGCCAGACACAATGGCAGAGAAATTaGTATTGTCCCTGTCTTCCTCCACCAACAGCACAG +
Preference number: 6 (lower is better)
Translates to: INFSGQTQWQRN*YCPCLPPPTAQ
Trigger: CTGTGCTGTTGGTGGAGGAAGACAGGGACAATACCAATTTCTCTGCCATTGTGTCTGGCCTGAAAAATTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000118960.2