Pregenerated sensors for CAR14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038526Ensembl transcript IDs: ENSMUST00000036181.15, ENSMUST00000147962.3
Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGTTACCTAGCAGGACACGTGCCTGCCTACAACTGGTCGTCCAGTaGCTGCAGCCCTCAGAGAGGCTCCCTGGCAGGAGGAGAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GLPSRTRACLQLVVQ*LQPSERLPGRRRGR Trigger: CCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTAACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR GCA 90 bp | TACCTAGCAGGACACGTGCCTGCCTACAACTGGTCGTCCAGTGCCTaGAGCCCTCAGAGAGGCTCCCTGGCAGGAGGAGAGGGAGGCATC | + |
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Preference number: 1 (lower is better) Translates to: YLAGHVPAYNWSSSA*SPQRGSLAGGEGGI Trigger: GATGCCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR CCA 90 bp | GTGTATAGAGAGGGTTACCTAGCAGGACACGTGCCTGCCTACAACTaGTCGTCCAGTGCCTGCAGCCCTCAGAGAGGCTCCCTGGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: VYREGYLAGHVPAYN*SSSACSPQRGSLAG Trigger: TCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTAACCCTCTCTATACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR TCA 90 bp | CTTCCAACCAAGCATGAGGACAGGGAATCTCCTCATCCACAGCTTTaGAGGCCAAAGGCTCAGCCCTTCCTGAAGAGCTGGGGTCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LPTKHEDRESPHPQL*RPKAQPFLKSWGPW Trigger: CCAGGGACCCCAGCTCTTCAGGAAGGGCTGAGCCTTTGGCCTTCAAAGCTGTGGATGAGGAGATTCCCTGTCCTCATGCTTGGTTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR TCA 90 bp | GAGGTGAAAGATGGCAGTTTATCCTCAGCTTCTTCCAACCAAGCATaGGGACAGGGAATCTCCTCATCCACAGCTTTGAAGGCCAAAGGC | + |
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Preference number: 1 (lower is better) Translates to: EVKDGSLSSASSNQA*GQGISSSTALKAKG Trigger: GCCTTTGGCCTTCAAAGCTGTGGATGAGGAGATTCCCTGTCCTCATGCTTGGTTGGAAGAAGCTGAGGATAAACTGCCATCTTTCACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR-3UTR GCA 90 bp | GCCCTTCCTGAAGAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAGCAGGATGGTCGTCCAGTGCCTaGAGCCCTCAGAGAGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: ALPEELGSLVYREGYLAGWSSSA*SPQRGS Trigger: GGAGCCTCTCTGAGGGCTGCAGGCACTGGACGACCA...TCCTGCTAGGTAACCCTCTCTATACACCAGGGACCCCAGCTCTTCAGGAAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR-3UTR CCA 90 bp | GCCCTTCCTGAAGAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAGCAGGACTCAGAGAGGCTCCCTaGCAGGAGGAGAGGGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ALPEELGSLVYREGYLAGLREAP*QEEREA Trigger: TGCCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAG...TCCTGCTAGGTAACCCTCTCTATACACCAGGGACCCCAGCTCTTCAGGAAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR GCA 72 bp | AGCAGGACACGTGCCTGCCTACAACTGGTCGTCCAGTaGCTGCAGCCCTCAGAGAGGCTCCCTGGCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: SRTRACLQLVVQ*LQPSERLPGRR Trigger: CCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR CCA 72 bp | GAGGGTTACCTAGCAGGACACGTGCCTGCCTACAACTaGTCGTCCAGTGCCTGCAGCCCTCAGAGAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: EGYLAGHVPAYN*SSSACSPQRGS Trigger: GGAGCCTCTCTGAGGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTAACCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| 3UTR TCA 72 bp | AAGCATGAGGACAGGGAATCTCCTCATCCACAGCTTTaGAGGCCAAAGGCTCAGCCCTTCCTGAAGAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: KHEDRESPHPQL*RPKAQPFLKSW Trigger: CCAGCTCTTCAGGAAGGGCTGAGCCTTTGGCCTTCAAAGCTGTGGATGAGGAGATTCCCTGTCCTCATGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR GCA 90 bp | TCCAGTGCCTGCAGCCCTCAGAGAGGCTCCCTGGCAGGAGGAGAGGGAGGCATCGGCAGTCCACCCAGGTaGAGGGTTGGGGGCAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SSACSPQRGSLAGGEGGIGSPPR*RVGGRE Trigger: TTCCCTGCCCCCAACCCTGCACCTGGGTGGACTGCC...GATGCCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR TCA 90 bp | TCCAGTGCCTGCAGCCCTCAGAGAGGCTCCCTGGCAGGAGGAGAGGGAGGCATCACAGCTCTCTCACGCTaGAGGGAGGCACAGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: SSACSPQRGSLAGGEGGITALSR*REAQRS Trigger: AGACCTCTGTGCCTCCCTTCAGCGTGAGAGAGCTGT...GATGCCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR TCA 90 bp | CCAGTGCCTGCAGCCCTCAGAGAGGCTCCCTGGCAGGAGGAGAGGGAGGCATCTGTTGGCCAATGGTCCTaGCCGTGTGGGCCTTCATAT | + |
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Preference number: 4 (lower is better) Translates to: PVPAALREAPWQEEREASVGQWS*PCGPSY Trigger: ATATGAAGGCCCACACGGTCAGGACCATTGGCCAAC...AGATGCCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR GCA 90 bp | CCAGTGCCTGCAGCCCTCAGAGAGGCTCCCTGGCAGGAGGAGAGGGAGGCATCTGGGGGCAGGGAAAGCTaGACTGTATGGCCATTATTG | + |
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Preference number: 4 (lower is better) Translates to: PVPAALREAPWQEEREASGGRES*TVWPLL Trigger: CAATAATGGCCATACAGTGCAGCTTTCCCTGCCCCC...AGATGCCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR TCA 90 bp | AGAGGGTTACCTAGCAGGACACGTGCCTGCCTACAACTGGTCGTCCAGTGCCTGTCATATGTCCAGTGGTaGCCCCCATCTGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: RGLPSRTRACLQLVVQCLSYVQW*PPSAAR Trigger: CCTGGCTGCAGATGGGGGTCACCACTGGACATATGA...CAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTAACCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR TCA 90 bp | GAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAGCAGGACACGTGCCTGCCTGTCTGTCTGGATATTaGTGGGGGACTGGGCATCGC | + |
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Preference number: 4 (lower is better) Translates to: ELGSLVYREGYLAGHVPACLSGY*WGTGHR Trigger: GCGATGCCCAGTCCCCCATCAATATCCAGACAGACA...GGCAGGCACGTGTCCTGCTAGGTAACCCTCTCTATACACCAGGGACCCCAGCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR TCA 90 bp | TTACCTAGCAGGACACGTGCCTGCCTACAACTGGTCGTCCAGTGCCTGCAGCCCTCTGGGCCCTTCTGTTaGAGACTGTCCAGAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: LPSRTRACLQLVVQCLQPSGPFC*RLSRAH Trigger: GTGTGCTCTGGACAGTCTTCAACAGAAGGGCCCAGA...GGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR TCA 90 bp | GGCTCAGCCCTTCCTGAAGAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAAGATGGTCCTCTGGTTaGGAGGCTGGGGGACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GSALPEELGSLVYREGYLRWSSG*EAGGLC Trigger: ACAGAGTCCCCCAGCCTCTCAACCAGAGGACCATCT...TAGGTAACCCTCTCTATACACCAGGGACCCCAGCTCTTCAGGAAGGGCTGAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGTTACCTAGCAGGACACGTGCCTGCCTACAACTGGTCGTCCAGTGCCTGCTCAGGATAAGAGGTTaGCCAATGGTCCTGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: RGLPSRTRACLQLVVQCLLRIRG*PMVLTV Trigger: CACGGTCAGGACCATTGGCCAACCTCTTATCCTGAG...CAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTAACCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CCA 90 bp | TTACCTAGCAGGACACGTGCCTGCCTACAACTGGTCGTCCAGTGCCTGCAGCCCCCAGCATCTCTCCTGTaGTATACAGTGGTCCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: LPSRTRACLQLVVQCLQPPASLL*YTVVLL Trigger: AAGCAGGACCACTGTATACCACAGGAGAGATGCTGG...GGGCTGCAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CCA 90 bp | GGCTCAGCCCTTCCTGAAGAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAGAGGACAATGTCTCCTaGAGCTTCTCTAACTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: GSALPEELGSLVYREGYLEDNVS*SFSNCP Trigger: GGGACAGTTAGAGAAGCTCCAGGAGACATTGTCCTC...TAGGTAACCCTCTCTATACACCAGGGACCCCAGCTCTTCAGGAAGGGCTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CCA 90 bp | AGAGGGTTACCTAGCAGGACACGTGCCTGCCTACAACTGGTCGTCCAGTGCCTGTACAGTGGTCCTGCTTaGATGAAAGAAGCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: RGLPSRTRACLQLVVQCLYSGPA*MKEAKM Trigger: CATCTTTGCTTCTTTCATCCAAGCAGGACCACTGTA...CAGGCACTGGACGACCAGTTGTAGGCAGGCACGTGTCCTGCTAGGTAACCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CCA 90 bp | CTAAGGGAGAGAACATGGCGGTGTGAGGTGAAAGATGGCAGTTTATCCTCAGCTAATTGCTCCAGCTGTTaGGGGAACAGCTCTCTCACG | + |
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Preference number: 4 (lower is better) Translates to: LRERTWRCEVKDGSLSSANCSSC*GNSSLT Trigger: CGTGAGAGAGCTGTTCCCCCAACAGCTGGAGCAATT...AGCTGAGGATAAACTGCCATCTTTCACCTCACACCGCCATGTTCTCTCCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CCA 90 bp | AGAACATGGCGGTGTGAGGTGAAAGATGGCAGTTTATCCTCAGCTTCTTCCAACATGGTCCTGACCGTGTaGGCCTTCATATGTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: RTWRCEVKDGSLSSASSNMVLTV*AFICPV Trigger: CACTGGACATATGAAGGCCCACACGGTCAGGACCAT...GTTGGAAGAAGCTGAGGATAAACTGCCATCTTTCACCTCACACCGCCATGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR TCA 90 bp | TGGCGGTGTGAGGTGAAAGATGGCAGTTTATCCTCAGCTTCTTCCAACCAAGCAGGCACAGAGGTCTTCTaGTCTTTGTATCTTATTTCA | + |
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Preference number: 4 (lower is better) Translates to: WRCEVKDGSLSSASSNQAGTEVF*SLYLIS Trigger: TGAAATAAGATACAAAGATCAGAAGACCTCTGTGCC...TGCTTGGTTGGAAGAAGCTGAGGATAAACTGCCATCTTTCACCTCACACCGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR GCA 90 bp | AGAACATGGCGGTGTGAGGTGAAAGATGGCAGTTTATCCTCAGCTTCTTCCAACGGTATACAGTGGTCCTaGTTGGATGAAAGAAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: RTWRCEVKDGSLSSASSNGIQWS*LDERSK Trigger: TTTGCTTCTTTCATCCAAGCAGGACCACTGTATACC...GTTGGAAGAAGCTGAGGATAAACTGCCATCTTTCACCTCACACCGCCATGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CAA 90 bp | CCAGTGCCTGCAGCCCTCAGAGAGGCTCCCTGGCAGGAGGAGAGGGAGGCATCTACTCAGGATAAGAGGTaGGCCAATGGTCCTGACCGT | + |
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Preference number: 5 (lower is better) Translates to: PVPAALREAPWQEEREASTQDKR*ANGPDR Trigger: ACGGTCAGGACCATTGGCCAACCTCTTATCCTGAGT...AGATGCCTCCCTCTCCTCCTGCCAGGGAGCCTCTCTGAGGGCTGCAGGCACTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CAA 90 bp | TCAGCCCTTCCTGAAGAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAGCAAAGATGGTCCTCTGGTaGAGAGGCTGGGGGACTCTG | + |
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Preference number: 5 (lower is better) Translates to: SALPEELGSLVYREGYLAKMVLW*RGWGTL Trigger: CAGAGTCCCCCAGCCTCTCAACCAGAGGACCATCTT...TGCTAGGTAACCCTCTCTATACACCAGGGACCCCAGCTCTTCAGGAAGGGCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS TCA 90 bp | TCAGAATGTGATCATAAGCTGGATTCTCAGTCTCGCCCACCTCAATaGGGATGCCTAGGACAGCCAGGCCCTGTGGCTTCTGAGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SECDHKLDSQSRPPQ*GCLGQPGPVASELP Trigger: AGGCAGCTCAGAAGCCACAGGGCCTGGCTGTCCTAGGCATCCTCATTGAGGTGGGCGAGACTGAGAATCCAGCTTATGATCACATTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036181.15 ENSMUST00000147962.3 |
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| CDS-3UTR CAA 90 bp | TCAGCCCTTCCTGAAGAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAGCAATCTGGGCCCTTCTGTaGAAGACTGTCCAGAGCACA | + |
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Preference number: 5 (lower is better) Translates to: SALPEELGSLVYREGYLAIWALL*KTVQST Trigger: TGTGCTCTGGACAGTCTTCAACAGAAGGGCCCAGAT...TGCTAGGTAACCCTCTCTATACACCAGGGACCCCAGCTCTTCAGGAAGGGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CAA 90 bp | GAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAGCAGGACACGTGCCTGCCACTGTATGGCCATTATaGTGTAGATCCAAAGGCTCA | + |
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Preference number: 5 (lower is better) Translates to: ELGSLVYREGYLAGHVPATVWPL*CRSKGS Trigger: TGAGCCTTTGGATCTACACAATAATGGCCATACAGT...GGCAGGCACGTGTCCTGCTAGGTAACCCTCTCTATACACCAGGGACCCCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CAA 90 bp | AGAACATGGCGGTGTGAGGTGAAAGATGGCAGTTTATCCTCAGCTTCTTCCAACCTGTCTGTCTGGATATaGATGGGGGACTGGGCATCG | + |
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Preference number: 5 (lower is better) Translates to: RTWRCEVKDGSLSSASSNLSVWI*MGDWAS Trigger: CGATGCCCAGTCCCCCATCAATATCCAGACAGACAG...GTTGGAAGAAGCTGAGGATAAACTGCCATCTTTCACCTCACACCGCCATGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CAA 90 bp | TGGCGGTGTGAGGTGAAAGATGGCAGTTTATCCTCAGCTTCTTCCAACCAAGCAGTTGTAGCGGAAGAATaGCTCCAGCTGTTGGGGGAA | + |
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Preference number: 5 (lower is better) Translates to: WRCEVKDGSLSSASSNQAVVAEE*LQLLGE Trigger: TTCCCCCAACAGCTGGAGCAATTCTTCCGCTACAAC...TGCTTGGTTGGAAGAAGCTGAGGATAAACTGCCATCTTTCACCTCACACCGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS-3UTR CAA 90 bp | GGCTCAGCCCTTCCTGAAGAGCTGGGGTCCCTGGTGTATAGAGAGGGTTACCTAATACAGTGGTCCTGCTaGGATGAAAGAAGCAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: GSALPEELGSLVYREGYLIQWSC*DERSKD Trigger: ATCTTTGCTTCTTTCATCCAAGCAGGACCACTGTAT...TAGGTAACCCTCTCTATACACCAGGGACCCCAGCTCTTCAGGAAGGGCTGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS TCA 72 bp | GATCATAAGCTGGATTCTCAGTCTCGCCCACCTCAATaGGGATGCCTAGGACAGCCAGGCCCTGTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: DHKLDSQSRPPQ*GCLGQPGPVAS Trigger: AGAAGCCACAGGGCCTGGCTGTCCTAGGCATCCTCATTGAGGTGGGCGAGACTGAGAATCCAGCTTATGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036181.15 ENSMUST00000147962.3 |
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| CDS CCA 72 bp | CCCAGCATCTCTCCTGTGGTATACAGTGGTCCTGCTTaGATGAAAGAAGCAAAGATGGTCCTCTGGTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: PSISPVVYSGPA*MKEAKMVLWLR Trigger: TCTCAACCAGAGGACCATCTTTGCTTCTTTCATCCAAGCAGGACCACTGTATACCACAGGAGAGATGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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| CDS CAA 72 bp | ACCCAGCATCTCTCCTGTGGTATACAGTGGTCCTGCTaGGATGAAAGAAGCAAAGATGGTCCTCTGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: TQHLSCGIQWSC*DERSKDGPLVE Trigger: CTCAACCAGAGGACCATCTTTGCTTCTTTCATCCAAGCAGGACCACTGTATACCACAGGAGAGATGCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036181.15 |
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