Pregenerated sensors for CAR10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056158Ensembl transcript IDs: ENSMUST00000042943.13, ENSMUST00000107858.9, ENSMUST00000107859.8, ENSMUST00000107861.8, ENSMUST00000107863.4
Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAAGGAATCTGTTGCCTGCTAGGTCGGGCGTAGCTCACCTGGGATaGAGGATCGAGCCATGGAGTGGAGTGAAAGATAGATATACCTGC | + |
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Preference number: 1 (lower is better) Translates to: ARNLLPARSGVAHLG*RIEPWSGVKDRYTC Trigger: GCAGGTATATCTATCTTTCACTCCACTCCATGGCTCGATCCTTCATCCCAGGTGAGCTACGCCCGACCTAGCAGGCAACAGATTCCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| 3UTR GCA 90 bp | AAGGGTCACAGCATTGGAAAGGTTGGGGACCACTGCTCTAGGACATaGCAGGGTATGAGTCCCAAGACACCTATGCTAGTGTTTCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: KGHSIGKVGDHCSRT*QGMSPKTPMLVFQK Trigger: CTTCTGAAACACTAGCATAGGTGTCTTGGGACTCATACCCTGGCATGTCCTAGAGCAGTGGTCCCCAACCTTTCCAATGCTGTGACCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR TCA 90 bp | GTCTGGGCTGATGGTGGCCCATGCTCACACTCATCATCAATGGTGTaGCACAGTGGAATTTCCCATTCTGTAGACAGTCAGGCAAACTCT | + |
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Preference number: 1 (lower is better) Translates to: VWADGGPCSHSSSMV*HSGISHSVDSQANS Trigger: AGAGTTTGCCTGACTGTCTACAGAATGGGAAATTCCACTGTGTCACACCATTGATGATGAGTGTGAGCATGGGCCACCATCAGCCCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR GCA 90 bp | GGAATTGTATTAAAGGGTCACAGCATTGGAAAGGTTGGGGACCACTaGTCTAGGACATGCCAGGGTATGAGTCCCAAGACACCTATGCTA | + |
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Preference number: 1 (lower is better) Translates to: GIVLKGHSIGKVGDH*SRTCQGMSPKTPML Trigger: TAGCATAGGTGTCTTGGGACTCATACCCTGGCATGTCCTAGAGCAGTGGTCCCCAACCTTTCCAATGCTGTGACCCTTTAATACAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR TCA 90 bp | AAAAGAGGTACAGAAAAGATGAGGTTGGTTTATGCTCTAGGAGAGTaGTTTCTCAACCTGTGGAACATGACCTCCAGGGATCAAATACCA | + |
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Preference number: 1 (lower is better) Translates to: KRGTEKMRLVYALGE*FLNLWNMTSRDQIP Trigger: TGGTATTTGATCCCTGGAGGTCATGTTCCACAGGTTGAGAAATCACTCTCCTAGAGCATAAACCAACCTCATCTTTTCTGTACCTCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR CCA 90 bp | ATGCTAGTGTTTCAGAAGGAAATATTGTTTCACTGTAGCCTCTTCTaGGAAACCAAAAACCATAGCAAAAGGCACACAAAGAAAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: MLVFQKEILFHCSLF*ETKNHSKRHTKKGG Trigger: GCCTCCTTTCTTTGTGTGCCTTTTGCTATGGTTTTTGGTTTCCCAGAAGAGGCTACAGTGAAACAATATTTCCTTCTGAAACACTAGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR TCA 90 bp | ACTTCAAAGGCTCACAGAGAAAGGCAAGTCACCAAAGGCCACATCTaGAAAGAATTCCAGATTTGTGACTTTCTTAAAATGATCCATGAT | + |
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Preference number: 1 (lower is better) Translates to: TSKAHRERQVTKGHI*KEFQICDFLKMIHD Trigger: ATCATGGATCATTTTAAGAAAGTCACAAATCTGGAATTCTTTTCAGATGTGGCCTTTGGTGACTTGCCTTTCTCTGTGAGCCTTTGAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTAGAATTTCACTGAGGTaGGATTCTTCTTGGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGRISLR*DSSWLS Trigger: ACTAAGCCAAGAAGAATCCCACCTCAGTGAAATTCT...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGGCTGAGAAGTCTCATTaGGTTGAGTTATTAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMAEKSH*VELLVQ Trigger: CTGAACTAATAACTCAACCCAATGAGACTTCTCAGC...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAAGAAATAAGTGTCCTTaGTCAGCTTTGTCCTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTRNKCP*SALSWS Trigger: TGACCAGGACAAAGCTGACCAAGGACACTTATTTCT...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| 3UTR-3UTR TCA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGGAAGTCTCATTGGGTTaGGTTATTAGTTCAGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMEVSLG*VISSGK Trigger: TTTTCCTGAACTAATAACTCAACCCAATGAGACTTC...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAGCTGAGAAGTCTCATTaGGTTGAGTTATTAGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTAEKSH*VELLVQ Trigger: CTGAACTAATAACTCAACCCAATGAGACTTCTCAGC...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| 3UTR-3UTR TCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGTAGAATTTCACTaGGGTGGGATTCTTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCVVEFH*GGILLG Trigger: GCCAAGAAGAATCCCACCTCAGTGAAATTCTACAAC...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR-3UTR CCA 90 bp | CTTCAAAGGCTCACAGAGAAAGGCAAGTCACCAAAGGCCACATCTGAAAAGAATTGGAATCCACAGGGCTaGAAAGAGGTCAACACAGAA | + |
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Preference number: 2 (lower is better) Translates to: LQRLTEKGKSPKATSEKNWNPQG*KEVNTE Trigger: TTCTGTGTTGACCTCTTTCCAGCCCTGTGGATTCCA...ATTCTTTTCAGATGTGGCCTTTGGTGACTTGCCTTTCTCTGTGAGCCTTTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
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| 3UTR-3UTR TCA 90 bp | TATACCTGCTTAGCAAATGCATTCCTGCTTGCCACAAACTCAGTAAAACTGGCTAACAAAACATGGAGATaGAGGGACATGGGAGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: YTCLANAFLLATNSVKLANKTWR*RDMGEP Trigger: TGGCTCTCCCATGTCCCTTCATCTCCATGTTTTGTT...AGCCAGTTTTACTGAGTTTGTGGCAAGCAGGAATGCATTTGCTAAGCAGGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| 3UTR-3UTR GCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGAGAGAGACAGATaGACTCCTCTGAAACATTTT | + |
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Preference number: 2 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCRERDR*TPLKHF Trigger: AAAATGTTTCAGAGGAGTGCATCTGTCTCTCTCTCT...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR CAA 90 bp | GGTATGAGTCCCAAGACACCTATGCTAGTGTTTCAGAAGGAAATATaGTTTCACTGTAGCCTCTTCTGGGAAACCAAAAACCATAGCAAA | + |
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Preference number: 2 (lower is better) Translates to: GMSPKTPMLVFQKEI*FHCSLFWETKNHSK Trigger: TTTGCTATGGTTTTTGGTTTCCCAGAAGAGGCTACAGTGAAACAATATTTCCTTCTGAAACACTAGCATAGGTGTCTTGGGACTCATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR-3UTR CCA 90 bp | TATACCTGCTTAGCAAATGCATTCCTGCTTGCCACAAACTCAGTAAAACTGGCTAGAATTTCACTGAGGTaGGATTCTTCTTGGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: YTCLANAFLLATNSVKLARISLR*DSSWLS Trigger: ACTAAGCCAAGAAGAATCCCACCTCAGTGAAATTCT...AGCCAGTTTTACTGAGTTTGTGGCAAGCAGGAATGCATTTGCTAAGCAGGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| 3UTR-3UTR TCA 90 bp | TTCACAGTACATTATATATTTAGGCAGATAAGACCCACTTTACCAGAAGGGAAGGGGGTCACCACAACATaGGGAATTGTATTAAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: FTVHYIFRQIRPTLPEGKGVTTT*GIVLKG Trigger: ACCCTTTAATACAATTCCTCATGTTGTGGTGACCCC...CTTCCCTTCTGGTAAAGTGGGTCTTATCTGCCTAAATATATAATGTACTGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTGTTGTAGAATTTCACTaGGGTGGGATTCTTCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LVQLCDKEGNNSILIVCGVVEFH*GGILLG Trigger: GCCAAGAAGAATCCCACCTCAGTGAAATTCTACAAC...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCCTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTTGGCTTTTTCATCATaGAGGTGGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: QVLVQLCDKEGNNSILIVLAFSS*RWCVCV Trigger: CACACACACACACCACCTCCATGATGAAAAAGCCAA...GACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAGGACTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR-3UTR GCA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTAGAGAGAGAGACAGATaGACTCCTCTGAAACATTTT | + |
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Preference number: 2 (lower is better) Translates to: YTKAEKSHWVELLVQENSRERDR*TPLKHF Trigger: AAAATGTTTCAGAGGAGTGCATCTGTCTCTCTCTCT...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR-3UTR GCA 90 bp | CAAGTCCTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCAGAGAGAGAGACAGATaGACTCCTCTGAAACATTTT | + |
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Preference number: 2 (lower is better) Translates to: QVLVQLCDKEGNNSILIVRERDR*TPLKHF Trigger: AAAATGTTTCAGAGGAGTGCATCTGTCTCTCTCTCT...GACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAGGACTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR-3UTR CCA 90 bp | CAAGTCCTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCAGAATTTCACTGAGGTaGGATTCTTCTTGGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: QVLVQLCDKEGNNSILIVRISLR*DSSWLS Trigger: ACTAAGCCAAGAAGAATCCCACCTCAGTGAAATTCT...GACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAGGACTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR CAA 90 bp | GCCTTTGTACATCTCTATTTCAGCATGCCATTATACTTCAATGATTaGAATATAGTTCCTTTTGAACTTCTCTGGGGCAAGAACTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: AFVHLYFSMPLYFND*NIVPFELLWGKNSF Trigger: AAAAGAGTTCTTGCCCCAGAGAAGTTCAAAAGGAACTATATTCAAATCATTGAAGTATAATGGCATGCTGAAATAGAGATGTACAAAGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR-3UTR CCA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTTGTAATCAGGTTAACTaGTTGTTTTCTTCTAAGACC | + |
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Preference number: 2 (lower is better) Translates to: YTKAEKSHWVELLVQENSCNQVN*LFSSKT Trigger: GGTCTTAGAAGAAAACAACCAGTTAACCTGATTACA...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| 3UTR TCA 72 bp | CTGTTGCCTGCTAGGTCGGGCGTAGCTCACCTGGGATaGAGGATCGAGCCATGGAGTGGAGTGAAAGATAGA | + |
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Preference number: 3 (lower is better) Translates to: LLPARSGVAHLG*RIEPWSGVKDR Trigger: TCTATCTTTCACTCCACTCCATGGCTCGATCCTTCATCCCAGGTGAGCTACGCCCGACCTAGCAGGCAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| 3UTR GCA 72 bp | TTAAAGGGTCACAGCATTGGAAAGGTTGGGGACCACTaGTCTAGGACATGCCAGGGTATGAGTCCCAAGACA | + |
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Preference number: 3 (lower is better) Translates to: LKGHSIGKVGDH*SRTCQGMSPKT Trigger: TGTCTTGGGACTCATACCCTGGCATGTCCTAGAGCAGTGGTCCCCAACCTTTCCAATGCTGTGACCCTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR TCA 72 bp | GATGGTGGCCCATGCTCACACTCATCATCAATGGTGTaGCACAGTGGAATTTCCCATTCTGTAGACAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: DGGPCSHSSSMV*HSGISHSVDSQ Trigger: CTGACTGTCTACAGAATGGGAAATTCCACTGTGTCACACCATTGATGATGAGTGTGAGCATGGGCCACCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR CCA 72 bp | CCCATGCTCACACTCATCATCAATGGTGTGACACAGTaGAATTTCCCATTCTGTAGACAGTCAGGCAAACTC | + |
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Preference number: 3 (lower is better) Translates to: PMLTLIINGVTQ*NFPFCRQSGKL Trigger: GAGTTTGCCTGACTGTCTACAGAATGGGAAATTCCACTGTGTCACACCATTGATGATGAGTGTGAGCATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR GCA 72 bp | ATCGAGCCATGGAGTGGAGTGAAAGATAGATATACCTaGTTAGCAAATGCATTCCTGCTTGCCACAAACTCA | + |
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Preference number: 3 (lower is better) Translates to: IEPWSGVKDRYT*LANAFLLATNS Trigger: TGAGTTTGTGGCAAGCAGGAATGCATTTGCTAAGCAGGTATATCTATCTTTCACTCCACTCCATGGCTCGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| 3UTR-3UTR CAA 90 bp | CACAACATGAGGAATTGTATTAAAGGGTCACAGCATTGGAAAGGTTGGGGACCATTTCAGAAGGAAATATaGTTTCACTGTAGCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: HNMRNCIKGSQHWKGWGPFQKEI*FHCSLF Trigger: GAAGAGGCTACAGTGAAACAATATTTCCTTCTGAAA...TGGTCCCCAACCTTTCCAATGCTGTGACCCTTTAATACAATTCCTCATGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR GCA 72 bp | GAAGAAAAGAGGTACAGAAAAGATGAGGTTGGTTTATaGTCTAGGAGAGTGATTTCTCAACCTGTGGAACAT | + |
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Preference number: 3 (lower is better) Translates to: EEKRYRKDEVGL*SRRVISQPVEH Trigger: ATGTTCCACAGGTTGAGAAATCACTCTCCTAGAGCATAAACCAACCTCATCTTTTCTGTACCTCTTTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| 3UTR TCA 72 bp | ATAAAGAGTGAACTAGGTCAAGTGTCACCTCACAGATaGAATCTGGTTAAACCTTATCTCTTATCTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: IKSELGQVSPHR*NLVKPYLLSHL Trigger: CAGATGAGATAAGAGATAAGGTTTAACCAGATTTCATCTGTGAGGTGACACTTGACCTAGTTCACTCTTTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
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| CDS-3UTR TCA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTTCCTGCCCCCAGTGTTaGTGCGAAGAGGTGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGSCPQC*CEEVSE Trigger: TTCTGACACCTCTTCGCATCAACACTGGGGGCAGGA...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS-3UTR TCA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTAAGATCTGCGATGGCTaGTTCTGGCTGAGGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGKICDG*FWLRRR Trigger: ACGCCTCCTCAGCCAGAATCAGCCATCGCAGATCTT...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS-3UTR TCA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTATTTCTTCCAGGCGGTaGCTGTATGTCATGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGISSRR*LYVMGP Trigger: AGGGCCCATGACATACAGTCACCGCCTGGAAGAAAT...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS-3UTR TCA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGAAGATCTGCGATGGCTaGTTCTGGCTGAGGAGGCGT | + |
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Preference number: 4 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMKICDG*FWLRRR Trigger: ACGCCTCCTCAGCCAGAATCAGCCATCGCAGATCTT...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS-3UTR GCA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGACCACCTCCTTGTATaGCCACCAGCCTTCATGGAT | + |
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Preference number: 4 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGDHLLV*PPAFMD Trigger: ATCCATGAAGGCTGGTGGGCATACAAGGAGGTGGTC...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS-3UTR GCA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGTGTCCATTGAGGAGGTaGTCAGACCCTTGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMCPLRR*SDPWLS Trigger: GGACAGCCAAGGGTCTGAGCACCTCCTCAATGGACA...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS-3UTR CCA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTCAGAAAGATCTGCGATaGCTGATTCTGGCTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGQKDLR*LILAEE Trigger: CTCCTCAGCCAGAATCAGCCATCGCAGATCTTTCTG...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS-3UTR TCA 90 bp | GGAGGCCCCTTCTTGCTCCGTGACTCTTGTGTATCCAGTGCAATGAGCAAGATCTCCTGCCCCCAGTGTTaGTGCGAAGAGGTGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GGPFLLRDSCVSSAMSKISCPQC*CEEVSE Trigger: TTCTGACACCTCTTCGCATCAACACTGGGGGCAGGA...GATCTTGCTCATTGCACTGGATACACAAGAGTCACGGAGCAAGAAGGGGCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
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| CDS-3UTR TCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAATTTCTTCCAGGCGGTaGCTGTATGTCATGGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTISSRR*LYVMGP Trigger: AGGGCCCATGACATACAGTCACCGCCTGGAAGAAAT...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| CDS-3UTR GCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAGACCACCTCCTTGTATaGCCACCAGCCTTCATGGAT | + |
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Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTDHLLV*PPAFMD Trigger: ATCCATGAAGGCTGGTGGGCATACAAGGAGGTGGTC...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
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| CDS-3UTR GCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAAGGCGGAGGGAGACATaGCTTCCAGTGTTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTRRRET*LPVLYM Trigger: CATGTACAACACTGGAAGGCATGTCTCCCTCCGCCT...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGCAGAAAGATCTGCGATaGCTGATTCTGGCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMQKDLR*LILAEE Trigger: CTCCTCAGCCAGAATCAGCCATCGCAGATCTTTCTG...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACATGTCATGGGCCCTCCTaGAATATTGACCAAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTCHGPS*NIDQVL Trigger: GAGCACTTGGTCAATATTTCAGGAGGGCCCATGACA...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCTGATGGTGGCCCATGCTCACACTCATCATCAATGGTGTGACACAGTGATTTCTTCCAGGCGGTaGCTGTATGTCATGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SGLMVAHAHTHHQWCDTVISSRR*LYVMGP Trigger: AGGGCCCATGACATACAGTCACCGCCTGGAAGAAAT...CACTGTGTCACACCATTGATGATGAGTGTGAGCATGGGCCACCATCAGCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGCCAGAAAGAAGGAACTaGAACAAAGCTTCCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMPERRN*NKASLD Trigger: GTCCAGGGAAGCTTTGTTCCAGTTCCTTCTTTCTGG...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGACAGCGATTATTGAGTaGCTGGACAGGCCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMTAIIE*LDRPEV Trigger: AACTTCAGGCCTGTCCAGCCACTCAATAATCGCTGT...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CATGATGGAATCCACAGGGCTGGAAAGAGGTCAACACAGAATCACCCAGACAGTATGTTGACAGGGGACTaGCGCTTCCCCACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HDGIHRAGKRSTQNHPDSMLTGD*RFPTEQ Trigger: TTGCTCTGTGGGGAAGCGTCAGTCCCCTGTCAACAT...ACTGTCTGGGTGATTCTGTGTTGACCTCTTTCCAGCCCTGTGGATTCCATCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR TCA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGGGGTCGAAGATCATGTaGCTGGTTTCTATGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMGSKIM*LVSMLT Trigger: TGTCAACATAGAAACCAGTCACATGATCTTCGACCC...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR GCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAGAAATATTGACCAAGTaGTCTTTGTCCAGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTEILTK*SLSRRR Trigger: CCTCCGCCTGGACAAAGAGCACTTGGTCAATATTTC...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACACCAGAAAGAAGGAACTaGAACAAAGCTTCCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTPERRN*NKASLD Trigger: GTCCAGGGAAGCTTTGTTCCAGTTCCTTCTTTCTGG...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACATCTTCGCAGCTTCTGTaGCATTTGTGTATAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTSSQLL*HLCIAR Trigger: ACGAGCTATACACAAATGTCACAGAAGCTGCGAAGA...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAGCCCACCAGCCTTCATaGATTTTTGGTGAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTAHQPS*IFGEFC Trigger: ACAGAATTCACCAAAAATCCATGAAGGCTGGTGGGC...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTGACAGGGGACTaGCGCTTCCCCACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCMLTGD*RFPTEQ Trigger: TTGCTCTGTGGGGAAGCGTCAGTCCCCTGTCAACAT...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTATGTTGACAGGGGACTaGCGCTTCCCCACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCMLTGD*RFPTEQ Trigger: TTGCTCTGTGGGGAAGCGTCAGTCCCCTGTCAACAT...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTTCCTGCCCCCAGTGTTaGTGCGAAGAGGTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCSCPQC*CEEVSE Trigger: TTCTGACACCTCTTCGCATCAACACTGGGGGCAGGA...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR GCA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTTGTCCATTGAGGAGGTaGTCAGACCCTTGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCCPLRR*SDPWLS Trigger: GGACAGCCAAGGGTCTGAGCACCTCCTCAATGGACA...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACACTGATATGCAGACGATaGAATTGGCTTGAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTLICRR*NWLEEE Trigger: TTCTTCTTCAAGCCAATTTCATCGTCTGCATATCAG...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTTGCTCCGTGACTCTTGTGTATCCAGTGCAATGAGCAAGATCACACTGGCAAAGATTCCAAGCTaGGTTCACCAATCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFLLRDSCVSSAMSKITLAKIPS*VHQSPE Trigger: TTCTGGGGATTGGTGAACTCAGCTTGGAATCTTTGC...CAGTGTGATCTTGCTCATTGCACTGGATACACAAGAGTCACGGAGCAAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTATTTCTTCCAGGCGGTaGCTGTATGTCATGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCISSRR*LYVMGP Trigger: AGGGCCCATGACATACAGTCACCGCCTGGAAGAAAT...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGGCTGATGGTGGCCCATGCTCACACTCATCATCAATGGTGTGACACAGTGCTGATATGCAGACGATaGAATTGGCTTGAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SGLMVAHAHTHHQWCDTVLICRR*NWLEEE Trigger: TTCTTCTTCAAGCCAATTTCATCGTCTGCATATCAG...CACTGTGTCACACCATTGATGATGAGTGTGAGCATGGGCCACCATCAGCCCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCAGGGTATGAGTCCCAAGACACCTATGCTAGTGTTTCAGAAGGAAATATTATGTTGACAGGGGACTaGCGCTTCCCCACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: MPGYESQDTYASVSEGNIMLTGD*RFPTEQ Trigger: TTGCTCTGTGGGGAAGCGTCAGTCCCCTGTCAACAT...AATATTTCCTTCTGAAACACTAGCATAGGTGTCTTGGGACTCATACCCTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTTGCTCCGTGACTCTTGTGTATCCAGTGCAATGAGCAAGATCACACTGGGGTCGAAGATCATGTaGCTGGTTTCTATGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PFLLRDSCVSSAMSKITLGSKIM*LVSMLT Trigger: TGTCAACATAGAAACCAGTCACATGATCTTCGACCC...CAGTGTGATCTTGCTCATTGCACTGGATACACAAGAGTCACGGAGCAAGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR TCA 90 bp | TATACCTGCTTAGCAAATGCATTCCTGCTTGCCACAAACTCAGTAAAACTGGCTTCCTGCCCCCAGTGTTaGTGCGAAGAGGTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YTCLANAFLLATNSVKLASCPQC*CEEVSE Trigger: TTCTGACACCTCTTCGCATCAACACTGGGGGCAGGA...AGCCAGTTTTACTGAGTTTGTGGCAAGCAGGAATGCATTTGCTAAGCAGGTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTTGCTCCGTGACTCTTGTGTATCCAGTGCAATGAGCAAGATCACACTGGCCCACCAGCCTTCATaGATTTTTGGTGAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLLRDSCVSSAMSKITLAHQPS*IFGEFC Trigger: ACAGAATTCACCAAAAATCCATGAAGGCTGGTGGGC...CAGTGTGATCTTGCTCATTGCACTGGATACACAAGAGTCACGGAGCAAGAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR CCA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAGAAACTAGAGGTCTCTaGATACAGTTCCTCTATATT | + |
|
Preference number: 4 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTETRGL*IQFLYI Trigger: AATATAGAGGAACTGTATCCAGAGACCTCTAGTTTC...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAAGATTCCAAGCTaGGTTCACCAATCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCAKIPS*VHQSPE Trigger: TTCTGGGGATTGGTGAACTCAGCTTGGAATCTTTGC...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR GCA 90 bp | ACAGAGAAAGGCAAGTCACCAAAGGCCACATCTGAAAAGAATTCCAGATTTGTGGACCACCTCCTTGTATaGCCACCAGCCTTCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TEKGKSPKATSEKNSRFVDHLLV*PPAFMD Trigger: ATCCATGAAGGCTGGTGGGCATACAAGGAGGTGGTC...CACAAATCTGGAATTCTTTTCAGATGTGGCCTTTGGTGACTTGCCTTTCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR GCA 90 bp | ATTGTATTAAAGGGTCACAGCATTGGAAAGGTTGGGGACCACTGCTCTAGGACATACAAGTTGGCCCTATaGCTTAGCACTTTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IVLKGHSIGKVGDHCSRTYKLAL*LSTLAG Trigger: ACCTGCCAAAGTGCTAAGGCATAGGGCCAACTTGTA...TGTCCTAGAGCAGTGGTCCCCAACCTTTCCAATGCTGTGACCCTTTAATACAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCACAGAGAAAGGCAAGTCACCAAAGGCCACATCTGAAAAGAATTCCAGACCAGAAAGAAGGAACTaGAACAAAGCTTCCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLTEKGKSPKATSEKNSRPERRN*NKASLD Trigger: GTCCAGGGAAGCTTTGTTCCAGTTCCTTCTTTCTGG...TCTGGAATTCTTTTCAGATGTGGCCTTTGGTGACTTGCCTTTCTCTGTGAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR CCA 90 bp | CACAACATGAGGAATTGTATTAAAGGGTCACAGCATTGGAAAGGTTGGGGACCATATGCCTTAGCACTTTaGCAGGTGCACATACCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HNMRNCIKGSQHWKGWGPYALAL*QVHIPP Trigger: GGGAGGTATGTGCACCTGCCAAAGTGCTAAGGCATA...TGGTCCCCAACCTTTCCAATGCTGTGACCCTTTAATACAATTCCTCATGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR TCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGGGTCGAAGATCATGTaGCTGGTTTCTATGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCGSKIM*LVSMLT Trigger: TGTCAACATAGAAACCAGTCACATGATCTTCGACCC...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | TATACCTGCTTAGCAAATGCATTCCTGCTTGCCACAAACTCAGTAAAACTGGCTTGTCATGGGCCCTCCTaGAATATTGACCAAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YTCLANAFLLATNSVKLACHGPS*NIDQVL Trigger: GAGCACTTGGTCAATATTTCAGGAGGGCCCATGACA...AGCCAGTTTTACTGAGTTTGTGGCAAGCAGGAATGCATTTGCTAAGCAGGTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTTCTTCGCAGCTTCTGTaGCATTTGTGTATAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCSSQLL*HLCIAR Trigger: ACGAGCTATACACAAATGTCACAGAAGCTGCGAAGA...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAAGAGGTACAGAAAAGATGAGGTTGGTTTATGCTCTAGGAGAGTGATTTGTCCATTGAGGAGGTaGTCAGACCCTTGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEKRYRKDEVGLCSRRVICPLRR*SDPWLS Trigger: GGACAGCCAAGGGTCTGAGCACCTCCTCAATGGACA...AATCACTCTCCTAGAGCATAAACCAACCTCATCTTTTCTGTACCTCTTTTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR GCA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTCATTATTATCCAACTTaGTGTCTCATAGCAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCHYYPT*CLIAGR Trigger: CCGCCCTGCTATGAGACAGCAAGTTGGATAATAATG...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR GCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTCATTATTATCCAACTTaGTGTCTCATAGCAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCHYYPT*CLIAGR Trigger: CCGCCCTGCTATGAGACAGCAAGTTGGATAATAATG...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGCCCACCAGCCTTCATaGATTTTTGGTGAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCAHQPS*IFGEFC Trigger: ACAGAATTCACCAAAAATCCATGAAGGCTGGTGGGC...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGCCCACCAGCCTTCATaGATTTTTGGTGAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCAHQPS*IFGEFC Trigger: ACAGAATTCACCAAAAATCCATGAAGGCTGGTGGGC...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | CACAACATGAGGAATTGTATTAAAGGGTCACAGCATTGGAAAGGTTGGGGACCACCAGAAAGAAGGAACTaGAACAAAGCTTCCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HNMRNCIKGSQHWKGWGPPERRN*NKASLD Trigger: GTCCAGGGAAGCTTTGTTCCAGTTCCTTCTTTCTGG...TGGTCCCCAACCTTTCCAATGCTGTGACCCTTTAATACAATTCCTCATGTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR TCA 90 bp | GAGGCACAGATTTTCTTTCTCAGGTTCAAGGGAGCCTTCCCATCTGTTATTTCAGGGTCGAAGATCATGTaGCTGGTTTCTATGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: EAQIFFLRFKGAFPSVISGSKIM*LVSMLT Trigger: TGTCAACATAGAAACCAGTCACATGATCTTCGACCC...TGAAATAACAGATGGGAAGGCTCCCTTGAACCTGAGAAAGAAAATCTGTGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTATGAGTCCCAAGACACCTATGCTAGTGTTTCAGAAGGAAATATTGTTTTGTCATGGGCCCTCCTaGAATATTGACCAAGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGMSPKTPMLVFQKEILFCHGPS*NIDQVL Trigger: GAGCACTTGGTCAATATTTCAGGAGGGCCCATGACA...AAACAATATTTCCTTCTGAAACACTAGCATAGGTGTCTTGGGACTCATACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAAAAGAGGTACAGAAAAGATGAGGTTGGTTTATGCTCTAGGAGAGTGATTGACCACCTCCTTGTATaGCCACCAGCCTTCATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EEKRYRKDEVGLCSRRVIDHLLV*PPAFMD Trigger: ATCCATGAAGGCTGGTGGGCATACAAGGAGGTGGTC...AATCACTCTCCTAGAGCATAAACCAACCTCATCTTTTCTGTACCTCTTTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTCTGATATGCAGACGATaGAATTGGCTTGAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCLICRR*NWLEEE Trigger: TTCTTCTTCAAGCCAATTTCATCGTCTGCATATCAG...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTCTGATATGCAGACGATaGAATTGGCTTGAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCLICRR*NWLEEE Trigger: TTCTTCTTCAAGCCAATTTCATCGTCTGCATATCAG...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CAGGGTATGAGTCCCAAGACACCTATGCTAGTGTTTCAGAAGGAAATATTGTTTGCAAAGATTCCAAGCTaGGTTCACCAATCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGMSPKTPMLVFQKEILFAKIPS*VHQSPE Trigger: TTCTGGGGATTGGTGAACTCAGCTTGGAATCTTTGC...AAACAATATTTCCTTCTGAAACACTAGCATAGGTGTCTTGGGACTCATACCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR TCA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTATGTTGACAGGGGACTaGCGCTTCCCCACAGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LVQLCDKEGNNSILIVCGMLTGD*RFPTEQ Trigger: TTGCTCTGTGGGGAAGCGTCAGTCCCCTGTCAACAT...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | TATACCTGCTTAGCAAATGCATTCCTGCTTGCCACAAACTCAGTAAAACTGGCTGGGTCGAAGATCATGTaGCTGGTTTCTATGTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YTCLANAFLLATNSVKLAGSKIM*LVSMLT Trigger: TGTCAACATAGAAACCAGTCACATGATCTTCGACCC...AGCCAGTTTTACTGAGTTTGTGGCAAGCAGGAATGCATTTGCTAAGCAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CAGTTCCTTGACATTGATTTCACAGTACATTATATATTTAGGCAGATAAGACCCTCCTGCCCCCAGTGTTaGTGCGAAGAGGTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QFLDIDFTVHYIFRQIRPSCPQC*CEEVSE Trigger: TTCTGACACCTCTTCGCATCAACACTGGGGGCAGGA...GGGTCTTATCTGCCTAAATATATAATGTACTGTGAAATCAATGTCAAGGAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR GCA 90 bp | TATACCTGCTTAGCAAATGCATTCCTGCTTGCCACAAACTCAGTAAAACTGGCTCATTATTATCCAACTTaGTGTCTCATAGCAGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YTCLANAFLLATNSVKLAHYYPT*CLIAGR Trigger: CCGCCCTGCTATGAGACAGCAAGTTGGATAATAATG...AGCCAGTTTTACTGAGTTTGTGGCAAGCAGGAATGCATTTGCTAAGCAGGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CTTCAAAGGCTCACAGAGAAAGGCAAGTCACCAAAGGCCACATCTGAAAAGAATCTGATATGCAGACGATaGAATTGGCTTGAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LQRLTEKGKSPKATSEKNLICRR*NWLEEE Trigger: TTCTTCTTCAAGCCAATTTCATCGTCTGCATATCAG...ATTCTTTTCAGATGTGGCCTTTGGTGACTTGCCTTTCTCTGTGAGCCTTTGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR GCA 90 bp | AGATTTTCTTTCTCAGGTTCAAGGGAGCCTTCCCATCTGTTATTTCACTGTTATGAAATATTGACCAAGTaGTCTTTGTCCAGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RFSFSGSREPSHLLFHCYEILTK*SLSRRR Trigger: CCTCCGCCTGGACAAAGAGCACTTGGTCAATATTTC...ATAACAGTGAAATAACAGATGGGAAGGCTCCCTTGAACCTGAGAAAGAAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CCA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGAAACTAGAGGTCTCTaGATACAGTTCCTCTATATT | + |
|
Preference number: 4 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCETRGL*IQFLYI Trigger: AATATAGAGGAACTGTATCCAGAGACCTCTAGTTTC...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTCAGAAAGATCTGCGATaGCTGATTCTGGCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YTKAEKSHWVELLVQENSQKDLR*LILAEE Trigger: CTCCTCAGCCAGAATCAGCCATCGCAGATCTTTCTG...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCGGTGACTGTATGTCATaGGCCCTCTTACCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVLVQLCDKEGNNSILIVGDCMS*ALLPSC Trigger: GCAGGAAGGTAAGAGGGCCCATGACATACAGTCACC...GACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAGGACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107858.9 |
||
| 3UTR CAA 72 bp | CCCAAGACACCTATGCTAGTGTTTCAGAAGGAAATATaGTTTCACTGTAGCCTCTTCTGGGAAACCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PKTPMLVFQKEI*FHCSLFWETKN Trigger: GTTTTTGGTTTCCCAGAAGAGGCTACAGTGAAACAATATTTCCTTCTGAAACACTAGCATAGGTGTCTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR TCA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTGCAAAGATTCCAAGCTaGGTTCACCAATCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YTKAEKSHWVELLVQENSAKIPS*VHQSPE Trigger: TTCTGGGGATTGGTGAACTCAGCTTGGAATCTTTGC...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | AGATTTTCTTTCTCAGGTTCAAGGGAGCCTTCCCATCTGTTATTTCACTGTTATGCCCACCAGCCTTCATaGATTTTTGGTGAATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFSFSGSREPSHLLFHCYAHQPS*IFGEFC Trigger: ACAGAATTCACCAAAAATCCATGAAGGCTGGTGGGC...ATAACAGTGAAATAACAGATGGGAAGGCTCCCTTGAACCTGAGAAAGAAAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CCA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTACAGCGATTATTGAGTaGCTGGACAGGCCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YTKAEKSHWVELLVQENSTAIIE*LDRPEV Trigger: AACTTCAGGCCTGTCCAGCCACTCAATAATCGCTGT...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTGCAAAGATTCCAAGCTaGGTTCACCAATCCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVQLCDKEGNNSILIVCGAKIPS*VHQSPE Trigger: TTCTGGGGATTGGTGAACTCAGCTTGGAATCTTTGC...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR GCA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTGAAATATTGACCAAGTaGTCTTTGTCCAGGCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVQLCDKEGNNSILIVCGEILTK*SLSRRR Trigger: CCTCCGCCTGGACAAAGAGCACTTGGTCAATATTTC...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTACAGCGATTATTGAGTaGCTGGACAGGCCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LVQLCDKEGNNSILIVCGTAIIE*LDRPEV Trigger: AACTTCAGGCCTGTCCAGCCACTCAATAATCGCTGT...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR TCA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTTCTTCGCAGCTTCTGTaGCATTTGTGTATAGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LVQLCDKEGNNSILIVCGSSQLL*HLCIAR Trigger: ACGAGCTATACACAAATGTCACAGAAGCTGCGAAGA...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CCA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTGAAACTAGAGGTCTCTaGATACAGTTCCTCTATATT | + |
|
Preference number: 4 (lower is better) Translates to: LVQLCDKEGNNSILIVCGETRGL*IQFLYI Trigger: AATATAGAGGAACTGTATCCAGAGACCTCTAGTTTC...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS CCA 90 bp | ACCTCCCCGGAGAAGGCCTGTCCATTGAGGAGGTGCTCAGACCCTTaGCTGTCCTCACTCCCAAAGTGTAGCCGGATTTCTTCCAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TSPEKACPLRRCSDP*LSSLPKCSRISSRR Trigger: CCGCCTGGAAGAAATCCGGCTACACTTTGGGAGTGAGGACAGCCAAGGGTCTGAGCACCTCCTCAATGGACAGGCCTTCTCCGGGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTCCCTGGACCACCTCCTaGTATGCCCACCAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGPWTTS*YAHQPS Trigger: TGAAGGCTGGTGGGCATACAAGGAGGTGGTCCAGGG...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGGTGCTCAGACCCTaGGCTGTCCTCACTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGEVLRP*AVLTPK Trigger: TTTGGGAGTGAGGACAGCCAAGGGTCTGAGCACCTC...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGAAGGCCTGTCCATaGAGGAGGTGCTCAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGEKACP*RRCSDP Trigger: AGGGTCTGAGCACCTCCTCAATGGACAGGCCTTCTC...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGGAGGTGCTCAGACCCTaGGCTGTCCTCACTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMEVLRP*AVLTPK Trigger: TTTGGGAGTGAGGACAGCCAAGGGTCTGAGCACCTC...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGGAGAAGGCCTGTCCATaGAGGAGGTGCTCAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMEKACP*RRCSDP Trigger: AGGGTCTGAGCACCTCCTCAATGGACAGGCCTTCTC...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS TCA 90 bp | TGGCTGTCCTCACTCCCAAAGTGTAGCCGGATTTCTTCCAGGCGGTaGCTGTATGTCATGGGCCCTCTTACCTTCCTGCCCCCAGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WLSSLPKCSRISSRR*LYVMGPLTFLPPVL Trigger: CAACACTGGGGGCAGGAAGGTAAGAGGGCCCATGACATACAGTCACCGCCTGGAAGAAATCCGGCTACACTTTGGGAGTGAGGACAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107858.9 |
||
| CDS GCA 90 bp | TGGATGAGTTGTACCTCCCCGGAGAAGGCCTGTCCATTGAGGAGGTaGTCAGACCCTTGGCTGTCCTCACTCCCAAAGTGTAGCCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: WMSCTSPEKACPLRR*SDPWLSSLPKCSRI Trigger: AATCCGGCTACACTTTGGGAGTGAGGACAGCCAAGGGTCTGAGCACCTCCTCAATGGACAGGCCTTCTCCGGGGAGGTACAACTCATCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCCCTTCTTGCTCCGTGACTCTTGTGTATCCAGTGCAATGAGCAAGATCCCCTGGACCACCTCCTaGTATGCCCACCAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GGPFLLRDSCVSSAMSKIPWTTS*YAHQPS Trigger: TGAAGGCTGGTGGGCATACAAGGAGGTGGTCCAGGG...GATCTTGCTCATTGCACTGGATACACAAGAGTCACGGAGCAAGAAGGGGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR CAA 90 bp | ATTGGAAAGGTTGGGGACCACTGCTCTAGGACATGCCAGGGTATGAGTCCCAAGCCCTGGACCACCTCCTaGTATGCCCACCAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: IGKVGDHCSRTCQGMSPKPWTTS*YAHQPS Trigger: TGAAGGCTGGTGGGCATACAAGGAGGTGGTCCAGGG...CTTGGGACTCATACCCTGGCATGTCCTAGAGCAGTGGTCCCCAACCTTTCCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGTTCCTGCCCCCAGTGTaGATGCGAAGAGGTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMFLPPV*MRRGVR Trigger: TCTGACACCTCTTCGCATCAACACTGGGGGCAGGAA...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTCGAATACAGCGATTATaGAGTGGCTGGACAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGRIQRL*SGWTGL Trigger: CAGGCCTGTCCAGCCACTCAATAATCGCTGTATTCG...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAAGCTTCTGGGCCCTGTaGTTAGGACAGTCCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTSFWAL*LGQSFP Trigger: GGGGAAGGACTGTCCTAACAACAGGGCCCAGAAGCT...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACATTCCTGCCCCCAGTGTaGATGCGAAGAGGTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTFLPPV*MRRGVR Trigger: TCTGACACCTCTTCGCATCAACACTGGGGGCAGGAA...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGACATGCCTTCCAGTGTaGTACATGGTCCCACTGACC | + |
|
Preference number: 5 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMTCLPV*YMVPLT Trigger: GGTCAGTGGGACCATGTACAACACTGGAAGGCATGT...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS TCA 90 bp | GGTGACTGTATGTCATGGGCCCTCTTACCTTCCTGCCCCCAGTGTTaGTGCGAAGAGGTGTCAGAAAGGGGTCGAAGATCATGTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDCMSWALLPSCPQC*CEEVSERGRRSCDW Trigger: CCAGTCACATGATCTTCGACCCCTTTCTGACACCTCTTCGCATCAACACTGGGGGCAGGAAGGTAAGAGGGCCCATGACATACAGTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107858.9 |
||
| CDS GCA 90 bp | CCTGAAATATTGACCAAGTGCTCTTTGTCCAGGCGGAGGGAGACATaGCTTCCAGTGTTGTACATGGTCCCACTGACCTTCCTGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PEILTKCSLSRRRET*LPVLYMVPLTFLPP Trigger: TGGGGGCAGGAAGGTCAGTGGGACCATGTACAACACTGGAAGGCATGTCTCCCTCCGCCTGGACAAAGAGCACTTGGTCAATATTTCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | GAGAGCCAAGAAGATAGCGTGGGGCTAGGGCTTAGGTTGGCAGGAAGGAGAACAACATGCCTTCCAGTGTaGTACATGGTCCCACTGACC | + |
|
Preference number: 5 (lower is better) Translates to: ESQEDSVGLGLRLAGRRTTCLPV*YMVPLT Trigger: GGTCAGTGGGACCATGTACAACACTGGAAGGCATGT...TGTTCTCCTTCCTGCCAACCTAAGCCCTAGCCCCACGCTATCTTCTTGGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS TCA 90 bp | TTTCTTCCAGGCGGTGACTGTATGTCATGGGCCCTCCTGAAATATTaGCCAAGTGCTCTTTGTCCAGGCGGAGGGAGACATGCCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLPGGDCMSWALLKY*PSALCPGGGRHAFQ Trigger: CTGGAAGGCATGTCTCCCTCCGCCTGGACAAAGAGCACTTGGTCAATATTTCAGGAGGGCCCATGACATACAGTCACCGCCTGGAAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | ATTGGAAAGGTTGGGGACCACTGCTCTAGGACATGCCAGGGTATGAGTCCCAAGACATGCCTTCCAGTGTaGTACATGGTCCCACTGACC | + |
|
Preference number: 5 (lower is better) Translates to: IGKVGDHCSRTCQGMSPKTCLPV*YMVPLT Trigger: GGTCAGTGGGACCATGTACAACACTGGAAGGCATGT...CTTGGGACTCATACCCTGGCATGTCCTAGAGCAGTGGTCCCCAACCTTTCCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTTCATTATTATCCAACTaGCTGTCTCATAGCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGSLLSN*LSHSRA Trigger: CGCCCTGCTATGAGACAGCAAGTTGGATAATAATGA...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTGGTCACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTCCCTGTAAACTGAAGTaGATGTTGGTGCGAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: LVTCHSTLGVTQDTVRDGPCKLK*MLVRIQ Trigger: CTGTATTCGCACCAACATCAACTTCAGTTTACAGGG...ACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGTGACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS TCA 90 bp | TGGCTGTCCTCACTCCCAAAGTGTAGCCGGATTTCTTCCAGGCGGTaGCTGTATGTCATGGGCCCTCCTGAAATATTGACCAAGTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: WLSSLPKCSRISSRR*LYVMGPPEILTKCS Trigger: AGAGCACTTGGTCAATATTTCAGGAGGGCCCATGACATACAGTCACCGCCTGGAAGAAATCCGGCTACACTTTGGGAGTGAGGACAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CATGATGGAATCCACAGGGCTGGAAAGAGGTCAACACAGAATCACCCAGACAGTTTCCTGCCCCCAGTGTaGATGCGAAGAGGTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HDGIHRAGKRSTQNHPDSFLPPV*MRRGVR Trigger: TCTGACACCTCTTCGCATCAACACTGGGGGCAGGAA...ACTGTCTGGGTGATTCTGTGTTGACCTCTTTCCAGCCCTGTGGATTCCATCATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR CAA 90 bp | CACACAAAGAAAGGAGGCACAGATTTTCTTTCTCAGGTTCAAGGGAGCCTTCCCTTGACCAAGTGCTCTTaGTCCAGGCGGAGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: HTKKGGTDFLSQVQGSLPLTKCS*SRRRET Trigger: TGTCTCCCTCCGCCTGGACAAAGAGCACTTGGTCAA...GGGAAGGCTCCCTTGAACCTGAGAAAGAAAATCTGTGCCTCCTTTCTTTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CAA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGAGGTGCTCAGACCCTaGGCTGTCCTCACTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCEVLRP*AVLTPK Trigger: TTTGGGAGTGAGGACAGCCAAGGGTCTGAGCACCTC...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTAGCTTCTGGGCCCTGTaGTTAGGACAGTCCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCSFWAL*LGQSFP Trigger: GGGGAAGGACTGTCCTAACAACAGGGCCCAGAAGCT...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS TCA 90 bp | AGTTGTCACTCATGCTCAGAAAGATCTGCGATGGCTGATTCTGGCTaGGGAGGCGTAGGGAATGCATCTGCATCCTGGTTATGTACACAG | + |
|
Preference number: 5 (lower is better) Translates to: SCHSCSERSAMADSG*GGVGNASASWLCTQ Trigger: CTGTGTACATAACCAGGATGCAGATGCATTCCCTACGCCTCCTCAGCCAGAATCAGCCATCGCAGATCTTTCTGAGCATGAGTGACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | ACCTGTCACAGCACCCTCGGAGTAACCCAGGACACTGTCAGGGATGGTGAGATGAAACTGAAGTTGATGTaGGTGCGAATACAGCGATTA | + |
|
Preference number: 5 (lower is better) Translates to: TCHSTLGVTQDTVRDGEMKLKLM*VRIQRL Trigger: TAATCGCTGTATTCGCACCAACATCAACTTCAGTTT...CATCTCACCATCCCTGACAGTGTCCTGGGTTACTCCGAGGGTGCTGTGACAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTCGAATACAGCGATTATaGAGTGGCTGGACAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCRIQRL*SGWTGL Trigger: CAGGCCTGTCCAGCCACTCAATAATCGCTGTATTCG...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | AGTCCCAAGACACCTATGCTAGTGTTTCAGAAGGAAATATTGTTTCACTGTAGCGAGGTGCTCAGACCCTaGGCTGTCCTCACTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPKTPMLVFQKEILFHCSEVLRP*AVLTPK Trigger: TTTGGGAGTGAGGACAGCCAAGGGTCTGAGCACCTC...GCTACAGTGAAACAATATTTCCTTCTGAAACACTAGCATAGGTGTCTTGGGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTTGCTCCGTGACTCTTGTGTATCCAGTGCAATGAGCAAGATCACACTGGACGATGAAATTGGCTaGAAGAAGAAAAAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: PFLLRDSCVSSAMSKITLDDEIG*KKKKHL Trigger: GAGGTGCTTTTTCTTCTTCAAGCCAATTTCATCGTC...CAGTGTGATCTTGCTCATTGCACTGGATACACAAGAGTCACGGAGCAAGAAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS-3UTR CAA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTCCCTGGACCACCTCCTaGTATGCCCACCAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YTKAEKSHWVELLVQENSPWTTS*YAHQPS Trigger: TGAAGGCTGGTGGGCATACAAGGAGGTGGTCCAGGG...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CAGGGTATGAGTCCCAAGACACCTATGCTAGTGTTTCAGAAGGAAATATTGTTTTTCCTGCCCCCAGTGTaGATGCGAAGAGGTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QGMSPKTPMLVFQKEILFFLPPV*MRRGVR Trigger: TCTGACACCTCTTCGCATCAACACTGGGGGCAGGAA...AAACAATATTTCCTTCTGAAACACTAGCATAGGTGTCTTGGGACTCATACCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CAA 90 bp | CACAACATGAGGAATTGTATTAAAGGGTCACAGCATTGGAAAGGTTGGGGACCAGGCCCTCCTGAAATATaGACCAAGTGCTCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HNMRNCIKGSQHWKGWGPGPPEI*TKCSLS Trigger: GGACAAAGAGCACTTGGTCAATATTTCAGGAGGGCC...TGGTCCCCAACCTTTCCAATGCTGTGACCCTTTAATACAATTCCTCATGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGTACAGAAAAGATGAGGTTGGTTTATGCTCTAGGAGAGTGATTTCTCAAGAGAAGGCCTGTCCATaGAGGAGGTGCTCAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: KRYRKDEVGLCSRRVISQEKACP*RRCSDP Trigger: AGGGTCTGAGCACCTCCTCAATGGACAGGCCTTCTC...TTGAGAAATCACTCTCCTAGAGCATAAACCAACCTCATCTTTTCTGTACCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS GCA 90 bp | CTGCATCCTGGTTATGTACACAGGCTTGTTCATTATTATCCAACTTaGTGTCTCATAGCAGGGCGGGATAGTCATCGACCCATCATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LHPGYVHRLVHYYPT*CLIAGRDSHRPIIS Trigger: ACTTATGATGGGTCGATGACTATCCCGCCCTGCTATGAGACAGCAAGTTGGATAATAATGAACAAGCCTGTGTACATAACCAGGATGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTCCCTGGACCACCTCCTaGTATGCCCACCAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVQLCDKEGNNSILIVCGPWTTS*YAHQPS Trigger: TGAAGGCTGGTGGGCATACAAGGAGGTGGTCCAGGG...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | GAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGTGACGATGAAATTGGCTaGAAGAAGAAAAAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ETWLFHHGGGVCVCVCVCDDEIG*KKKKHL Trigger: GAGGTGCTTTTTCTTCTTCAAGCCAATTTCATCGTC...ACACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTGACGATGAAATTGGCTaGAAGAAGAAAAAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCDDEIG*KKKKHL Trigger: GAGGTGCTTTTTCTTCTTCAAGCCAATTTCATCGTC...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTGAAACTTGGCTTTTTCATCATGGAGGTGGTGTGTGTGTGTGTGTGTGTGTGTAGCCTTCATGGATTTTaGGTGAATTCTGTTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKLGFFIMEVVCVCVCVCSLHGF*VNSVEL Trigger: CAGCTCAACAGAATTCACCAAAAATCCATGAAGGCT...ACACACACACACACACACACACACCACCTCCATGATGAAAAAGCCAAGTTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTGAGAAGGCCTGTCCATaGAGGAGGTGCTCAGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVQLCDKEGNNSILIVCGEKACP*RRCSDP Trigger: AGGGTCTGAGCACCTCCTCAATGGACAGGCCTTCTC...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTAGCTTCTGGGCCCTGTaGTTAGGACAGTCCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVQLCDKEGNNSILIVCGSFWAL*LGQSFP Trigger: GGGGAAGGACTGTCCTAACAACAGGGCCCAGAAGCT...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | AGATTTTCTTTCTCAGGTTCAAGGGAGCCTTCCCATCTGTTATTTCACTGTTATCTATGCCTTAGCACTTaGGCAGGTGCACATACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFSFSGSREPSHLLFHCYLCLST*AGAHTS Trigger: GGAGGTATGTGCACCTGCCAAAGTGCTAAGGCATAG...ATAACAGTGAAATAACAGATGGGAAGGCTCCCTTGAACCTGAGAAAGAAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CAA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTTTCCTGCCCCCAGTGTaGATGCGAAGAGGTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVQLCDKEGNNSILIVCGFLPPV*MRRGVR Trigger: TCTGACACCTCTTCGCATCAACACTGGGGGCAGGAA...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTTTGACCAAGTGCTCTTaGTCCAGGCGGAGGGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LVQLCDKEGNNSILIVCGLTKCS*SRRRET Trigger: TGTCTCCCTCCGCCTGGACAAAGAGCACTTGGTCAA...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTCGAATACAGCGATTATaGAGTGGCTGGACAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTKAEKSHWVELLVQENSRIQRL*SGWTGL Trigger: CAGGCCTGTCCAGCCACTCAATAATCGCTGTATTCG...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | ATGCCAGGGTATGAGTCCCAAGACACCTATGCTAGTGTTTCAGAAGGAAATATTGACGATGAAATTGGCTaGAAGAAGAAAAAGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: MPGYESQDTYASVSEGNIDDEIG*KKKKHL Trigger: GAGGTGCTTTTTCTTCTTCAAGCCAATTTCATCGTC...AATATTTCCTTCTGAAACACTAGCATAGGTGTCTTGGGACTCATACCCTGGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTCCTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCGGCCCTCCTGAAATATaGACCAAGTGCTCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QVLVQLCDKEGNNSILIVGPPEI*TKCSLS Trigger: GGACAAAGAGCACTTGGTCAATATTTCAGGAGGGCC...GACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAGGACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTGGCCCTCCTGAAATATaGACCAAGTGCTCTTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVQLCDKEGNNSILIVCGGPPEI*TKCSLS Trigger: GGACAAAGAGCACTTGGTCAATATTTCAGGAGGGCC...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042943.13 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTTCATTATTATCCAACTaGCTGTCTCATAGCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: YTKAEKSHWVELLVQENSSLLSN*LSHSRA Trigger: CGCCCTGCTATGAGACAGCAAGTTGGATAATAATGA...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTCCCTGTAAACTGAAGTaGATGTTGGTGCGAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: YTKAEKSHWVELLVQENSPCKLK*MLVRIQ Trigger: CTGTATTCGCACCAACATCAACTTCAGTTTACAGGG...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | CTAGTACAGTTATGTGACAAAGAGGGAAATAATTCCATTCTTATAGTCTGTGGTCCCTGTAAACTGAAGTaGATGTTGGTGCGAATACAG | + |
|
Preference number: 5 (lower is better) Translates to: LVQLCDKEGNNSILIVCGPCKLK*MLVRIQ Trigger: CTGTATTCGCACCAACATCAACTTCAGTTTACAGGG...ACCACAGACTATAAGAATGGAATTATTTCCCTCTTTGTCACATAACTGTACTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS-3UTR CAA 90 bp | TATACAAAGGCTGAGAAGTCTCATTGGGTTGAGTTATTAGTTCAGGAAAACAGTAAACTGAAGTTGATGTaGGTGCGAATACAGCGATTA | + |
|
Preference number: 5 (lower is better) Translates to: YTKAEKSHWVELLVQENSKLKLM*VRIQRL Trigger: TAATCGCTGTATTCGCACCAACATCAACTTCAGTTT...ACTGTTTTCCTGAACTAATAACTCAACCCAATGAGACTTCTCAGCCTTTGTATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS GCA 72 bp | TGTACCTCCCCGGAGAAGGCCTGTCCATTGAGGAGGTaGTCAGACCCTTGGCTGTCCTCACTCCCAAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CTSPEKACPLRR*SDPWLSSLPKC Trigger: ACACTTTGGGAGTGAGGACAGCCAAGGGTCTGAGCACCTCCTCAATGGACAGGCCTTCTCCGGGGAGGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS GCA 72 bp | CATACCTCCCCGGAGAAGGCCTGTCCATTGAGGAGGTaGTCAGACCCTTGGCTGTCCTCACTCCCAAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HTSPEKACPLRR*SDPWLSSLPKC Trigger: ACACTTTGGGAGTGAGGACAGCCAAGGGTCTGAGCACCTCCTCAATGGACAGGCCTTCTCCGGGGAGGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107861.8 |
||
| CDS TCA 72 bp | TCACTCCCAAAGTGTAGCCGGATTTCTTCCAGGCGGTaGCTGTATGTCATGGGCCCTCTTACCTTCCTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLPKCSRISSRR*LYVMGPLTFLP Trigger: GGGCAGGAAGGTAAGAGGGCCCATGACATACAGTCACCGCCTGGAAGAAATCCGGCTACACTTTGGGAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107858.9 |
||
| CDS TCA 72 bp | GGCGGTGACTGTATGTCATGGGCCCTCCTGAAATATTaGCCAAGTGCTCTTTGTCCAGGCGGAGGGAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: GGDCMSWALLKY*PSALCPGGGRH Trigger: ATGTCTCCCTCCGCCTGGACAAAGAGCACTTGGTCAATATTTCAGGAGGGCCCATGACATACAGTCACCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS TCA 72 bp | ATGTCATGGGCCCTCTTACCTTCCTGCCCCCAGTGTTaGTGCGAAGAGGTGTCAGAAAGGGGTCGAAGATCA | + |
|
Preference number: 6 (lower is better) Translates to: MSWALLPSCPQC*CEEVSERGRRS Trigger: TGATCTTCGACCCCTTTCTGACACCTCTTCGCATCAACACTGGGGGCAGGAAGGTAAGAGGGCCCATGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107858.9 |
||
| CDS GCA 72 bp | TTGACCAAGTGCTCTTTGTCCAGGCGGAGGGAGACATaGCTTCCAGTGTTGTACATGGTCCCACTGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTKCSLSRRRET*LPVLYMVPLTF Trigger: GAAGGTCAGTGGGACCATGTACAACACTGGAAGGCATGTCTCCCTCCGCCTGGACAAAGAGCACTTGGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS TCA 72 bp | TTCTTCCAGGCGGTGACTGTATGTCATGGGCCCTCCTaGAATATTGACCAAGTGCTCTTTGTCCAGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FFQAVTVCHGPS*NIDQVLFVQAE Trigger: CTCCGCCTGGACAAAGAGCACTTGGTCAATATTTCAGGAGGGCCCATGACATACAGTCACCGCCTGGAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS GCA 72 bp | CTGTATGTCATGGGCCCTCCTGAAATATTGACCAAGTaGTCTTTGTCCAGGCGGAGGGAGACATGCCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LYVMGPPEILTK*SLSRRRETCLP Trigger: TGGAAGGCATGTCTCCCTCCGCCTGGACAAAGAGCACTTGGTCAATATTTCAGGAGGGCCCATGACATACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS CAA 72 bp | ACCTCCATAACACTGCAATCCTTCCTGCCCCCAGTGTaGATGCGAAGAGGTGTCAGAAAGGGGTCGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: TSITLQSFLPPV*MRRGVRKGSKI Trigger: GATCTTCGACCCCTTTCTGACACCTCTTCGCATCAACACTGGGGGCAGGAAGGATTGCAGTGTTATGGAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107859.8 |
||
| CDS TCA 72 bp | TCACTCCCAAAGTGTAGCCGGATTTCTTCCAGGCGGTaGCTGTATGTCATGGGCCCTCCTGAAATATTGACC | + |
|
Preference number: 6 (lower is better) Translates to: SLPKCSRISSRR*LYVMGPPEILT Trigger: GGTCAATATTTCAGGAGGGCCCATGACATACAGTCACCGCCTGGAAGAAATCCGGCTACACTTTGGGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107861.8 ENSMUST00000107863.4 |
||
| CDS CAA 90 bp | GCCCTGTTGTTAGGACAGTCCTTCCCCTGTAAACTGAAGTTGATGTaGGTGCGAATACAGCGATTATTGAGTGGCTGGACAGGCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALLLGQSFPCKLKLM*VRIQRLLSGWTGLK Trigger: CTTCAGGCCTGTCCAGCCACTCAATAATCGCTGTATTCGCACCAACATCAACTTCAGTTTACAGGGGAAGGACTGTCCTAACAACAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS CAA 90 bp | TTCTGGGCCCTGTTGTTAGGACAGTCCTTCCCCTGTAAACTGAAGTaGATGTTGGTGCGAATACAGCGATTATTGAGTGGCTGGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FWALLLGQSFPCKLK*MLVRIQRLLSGWTG Trigger: GCCTGTCCAGCCACTCAATAATCGCTGTATTCGCACCAACATCAACTTCAGTTTACAGGGGAAGGACTGTCCTAACAACAGGGCCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
||
| CDS CCA 72 bp | GAAGTTGATGTTGGTGCGAATACAGCGATTATTGAGTaGCTGGACAGGCCTGAAGTTGTCACTCATGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: EVDVGANTAIIE*LDRPEVVTHAQ Trigger: CTGAGCATGAGTGACAACTTCAGGCCTGTCCAGCCACTCAATAATCGCTGTATTCGCACCAACATCAACTTC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS CCA 72 bp | TTGAGGAGCCATTCGTTTACTCTGTACTGTAGCTTCTaGGCCCTGTTGTTAGGACAGTCCTTCCCCTGTAAA | + |
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Preference number: 6 (lower is better) Translates to: LRSHSFTLYCSF*ALLLGQSFPCK Trigger: TTTACAGGGGAAGGACTGTCCTAACAACAGGGCCCAGAAGCTACAGTACAGAGTAAACGAATGGCTCCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS CAA 90 bp | TTGAGGAGCCATTCGTTTACTCTGTACTGTAGCTTCTGGGCCCTGTaGTTAGGACAGTCCTTCCCCTGTAAACTGAAGTTGATGTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: LRSHSFTLYCSFWAL*LGQSFPCKLKLMLV Trigger: CACCAACATCAACTTCAGTTTACAGGGGAAGGACTGTCCTAACAACAGGGCCCAGAAGCTACAGTACAGAGTAAACGAATGGCTCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS CAA 90 bp | TTCCCCTGTAAACTGAAGTTGATGTTGGTGCGAATACAGCGATTATaGAGTGGCTGGACAGGCCTGAAGTTGTCACTCATGCTCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: FPCKLKLMLVRIQRL*SGWTGLKLSLMLRK Trigger: CTTTCTGAGCATGAGTGACAACTTCAGGCCTGTCCAGCCACTCAATAATCGCTGTATTCGCACCAACATCAACTTCAGTTTACAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS GCA 72 bp | GGTTATGTACACAGGCTTGTTCATTATTATCCAACTTaGTGTCTCATAGCAGGGCGGGATAGTCATCGACCC | + |
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Preference number: 6 (lower is better) Translates to: GYVHRLVHYYPT*CLIAGRDSHRP Trigger: GGGTCGATGACTATCCCGCCCTGCTATGAGACAGCAAGTTGGATAATAATGAACAAGCCTGTGTACATAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS CAA 72 bp | CATTCGTTTACTCTGTACTGTAGCTTCTGGGCCCTGTaGTTAGGACAGTCCTTCCCCTGTAAACTGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: HSFTLYCSFWAL*LGQSFPCKLKL Trigger: CAACTTCAGTTTACAGGGGAAGGACTGTCCTAACAACAGGGCCCAGAAGCTACAGTACAGAGTAAACGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS CAA 72 bp | AAACTGAAGTTGATGTTGGTGCGAATACAGCGATTATaGAGTGGCTGGACAGGCCTGAAGTTGTCACTCATG | + |
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Preference number: 6 (lower is better) Translates to: KLKLMLVRIQRL*SGWTGLKLSLM Trigger: CATGAGTGACAACTTCAGGCCTGTCCAGCCACTCAATAATCGCTGTATTCGCACCAACATCAACTTCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS CAA 72 bp | TTAGGACAGTCCTTCCCCTGTAAACTGAAGTTGATGTaGGTGCGAATACAGCGATTATTGAGTGGCTGGACA | + |
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Preference number: 6 (lower is better) Translates to: LGQSFPCKLKLM*VRIQRLLSGWT Trigger: TGTCCAGCCACTCAATAATCGCTGTATTCGCACCAACATCAACTTCAGTTTACAGGGGAAGGACTGTCCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS CAA 72 bp | CTGTTGTTAGGACAGTCCTTCCCCTGTAAACTGAAGTaGATGTTGGTGCGAATACAGCGATTATTGAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLLGQSFPCKLK*MLVRIQRLLSG Trigger: GCCACTCAATAATCGCTGTATTCGCACCAACATCAACTTCAGTTTACAGGGGAAGGACTGTCCTAACAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107863.4 |
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| CDS TCA 72 bp | TTTTTGGTGAATTCTGTTGAGCTGATATGCAGACGATaGAATTGGCTTGAAGAAGAAAAAGCACCTCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: FLVNSVELICRR*NWLEEEKAPPR Trigger: TCTGGGAGGTGCTTTTTCTTCTTCAAGCCAATTTCATCGTCTGCATATCAGCTCAACAGAATTCACCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000042943.13 ENSMUST00000107858.9 ENSMUST00000107859.8 ENSMUST00000107861.8 ENSMUST00000107863.4 |
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