Pregenerated sensors for CAR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027556Ensembl transcript IDs: ENSMUST00000094365.11, ENSMUST00000144327.3, ENSMUST00000181860.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTGACATAATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTaGTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: TDIILFLNRDPFIGC*CRGGQVLIEDSFLA Trigger: AGCAAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAATTATGTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| 3UTR GCA 90 bp | AGCACTGACATAATTCTGTTTCTTAATCGTGATCCCTTTATTGGATaGTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTT | + |
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Preference number: 1 (lower is better) Translates to: STDIILFLNRDPFIG*CCRGGQVLIEDSFL Trigger: AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAATTATGTCAGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| 3UTR GCA 72 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTaGTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCA | + |
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Preference number: 3 (lower is better) Translates to: ILFLNRDPFIGC*CRGGQVLIEDS Trigger: TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| 3UTR GCA 72 bp | ATAATTCTGTTTCTTAATCGTGATCCCTTTATTGGATaGTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGAC | + |
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Preference number: 3 (lower is better) Translates to: IILFLNRDPFIG*CCRGGQVLIED Trigger: GTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCACGGAGCTGGGCCAGCTaGTCTGGGCTTAGACTGATG | + |
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Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSRSWAS*SGLRLM Trigger: CATCAGTCTAAGCCCAGAGCAGCTGGCCCAGCTCCG...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGCTGCCCTTCAGGGGTTaGGGTGGACGGTGGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: NRDPFIGCCCRGGQVLIELPFRG*GGRWLL Trigger: GAGCAACCACCGTCCACCCCAACCCCTGAAGGGCAG...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGCGGAGCTGGGCCAGCTaGTCTGGGCTTAGACTGATG | + |
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Preference number: 4 (lower is better) Translates to: NRDPFIGCCCRGGQVLIERSWAS*SGLRLM Trigger: CATCAGTCTAAGCCCAGAGCAGCTGGCCCAGCTCCG...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCAGGGGTGGACGGTGGTTaGTCAGAACTGGAACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSGVDGG*SELELQ Trigger: CTGCAGTTCCAGTTCTGAGCAACCACCGTCCACCCC...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCACCAGGCCATCAGCCTTaGAGATGGCTTCAGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSPGHQP*RWLQKH Trigger: GTGCTTCTGAAGCCATCTCCAAGGCTGATGGCCTGG...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTGGGGTGGACGGTGGTTaGTCAGAACTGGAACTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLGVDGG*SELELQ Trigger: CTGCAGTTCCAGTTCTGAGCAACCACCGTCCACCCC...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGCAAAACGCCAAGGATTaGCAGGCCATCAGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEQNAKD*QAISLG Trigger: TCCAAGGCTGATGGCCTGGCAATCCTTGGCGTTTTG...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTGCTCAGAACTGGAACTaGAGGCTCTCCCTCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLAQNWN*RLSLCT Trigger: AGTGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGC...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCACATCAGCCTTGGAGATaGCTTCAGAAGCACTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSHQPWR*LQKHWS Trigger: ACTCCAGTGCTTCTGAAGCCATCTCCAAGGCTGATG...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR TCA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGCCAGTAATCCAGAGATaGAGGAAGCAGACTGGATGG | + |
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Preference number: 4 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEPVIQR*RKQTGW Trigger: CCATCCAGTCTGCTTCCTTCATCTCTGGATTACTGG...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTGTTCCATCCACGGTGTaGTCAGAGCCATGGTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLVPSTV*SEPWSF Trigger: AAACGACCATGGCTCTGAGCACACCGTGGATGGAAC...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGCTCAGAACTGGAACTaGAGGCTCTCCCTCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQAQNWN*RLSLCT Trigger: AGTGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGC...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGCCAGGCCATCAGCCTTaGAGATGGCTTCAGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQPGHQP*RWLQKH Trigger: GTGCTTCTGAAGCCATCTCCAAGGCTGATGGCCTGG...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGTACTTTCTGCAGGCTTaGGTTGGCTGGACCAACCTT | + |
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Preference number: 4 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEYFLQA*VGWTNL Trigger: AAGGTTGGTCCAGCCAACCCAAGCCTGCAGAAAGTA...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTTCCATCCACGGTGTaGTCAGAGCCATGGTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQVPSTV*SEPWSF Trigger: AAACGACCATGGCTCTGAGCACACCGTGGATGGAAC...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGCAAAACGCCAAGGATTaGCAGGCCATCAGCCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQQNAKD*QAISLG Trigger: TCCAAGGCTGATGGCCTGGCAATCCTTGGCGTTTTG...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATACAGCTTGCTCCATTaGTCAGGACCATTTTCGCTT | + |
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Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSYSLLH*SGPFSL Trigger: AAGCGAAAATGGTCCTGACCAATGGAGCAAGCTGTA...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATGGCTTCAGAAGCACTaGAGTACTTTGCAGAATTCC | + |
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Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSWLQKH*STLQNS Trigger: GGAATTCTGCAAAGTACTCCAGTGCTTCTGAAGCCA...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTTACTTTCTGCAGGCTTaGGTTGGCTGGACCAACCTT | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLYFLQA*VGWTNL Trigger: AAGGTTGGTCCAGCCAACCCAAGCCTGCAGAAAGTA...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR TCA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGATTATAGGAGATGCTaGGTGGTTTCAGAGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEDYRRC*VVSERS Trigger: ACTCCTCTCTGAAACCACTCAGCATCTCCTATAATC...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTCAATGGGATACAGCTTaGTCCATTGGTCAGGACCAT | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLQWDTA*SIGQDH Trigger: ATGGTCCTGACCAATGGAGCAAGCTGTATCCCATTG...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATGTTTCCATTGGCAATaGGATACAGCTTGCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSCFHWQ*DTACSI Trigger: AATGGAGCAAGCTGTATCCCATTGCCAATGGAAACA...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGACTGGTTGTTTCCATTaGCAATGGGATACAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: NRDPFIGCCCRGGQVLIETGCFH*QWDTAC Trigger: GCAAGCTGTATCCCATTGCCAATGGAAACAACCAGT...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGTGGCTTCAGAAGCACTaGAGTACTTTGCAGAATTCC | + |
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Preference number: 4 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEWLQKH*STLQNS Trigger: GGAATTCTGCAAAGTACTCCAGTGCTTCTGAAGCCA...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGCATCAGCCTTGGAGATaGCTTCAGAAGCACTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQHQPWR*LQKHWS Trigger: ACTCCAGTGCTTCTGAAGCCATCTCCAAGGCTGATG...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR TCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTGATTATAGGAGATGCTaGGTGGTTTCAGAGAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLDYRRC*VVSERS Trigger: ACTCCTCTCTGAAACCACTCAGCATCTCCTATAATC...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTTACAGCTTGCTCCATTaGTCAGGACCATTTTCGCTT | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLYSLLH*SGPFSL Trigger: AAGCGAAAATGGTCCTGACCAATGGAGCAAGCTGTA...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTATAGGAGATGCTGAGTaGTTTCAGAGAGGAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLIGDAE*FQRGVM Trigger: CATGACTCCTCTCTGAAACCACTCAGCATCTCCTAT...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCAAATTTCTTTGGCAGTTaGAGGATTATAGGAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSNFFGS*RIIGDA Trigger: AGCATCTCCTATAATCCTGCAACTGCCAAAGAAATT...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTTGTTTCCATTGGCAATaGGATACAGCTTGCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLCFHWQ*DTACSI Trigger: AATGGAGCAAGCTGTATCCCATTGCCAATGGAAACA...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCAATATCAATAGGAGACTaGTTGTTTCCATTGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSISIGD*LFPLAM Trigger: CATTGCCAATGGAAACAACCAGTCTCCTATTGATAT...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGATAGGAGATGCTGAGTaGTTTCAGAGAGGAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQIGDAE*FQRGVM Trigger: CATGACTCCTCTCTGAAACCACTCAGCATCTCCTAT...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR GCA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGAATTTCTTTGGCAGTTaGAGGATTATAGGAGATGCT | + |
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Preference number: 4 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQNFFGS*RIIGDA Trigger: AGCATCTCCTATAATCCTGCAACTGCCAAAGAAATT...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CCA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGATATCAATAGGAGACTaGTTGTTTCCATTGGCAATG | + |
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Preference number: 4 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQISIGD*LFPLAM Trigger: CATTGCCAATGGAAACAACCAGTCTCCTATTGATAT...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CCA 90 bp | AATGAGGCTCTGACTGTTCTGCCCTTCAGGGGTTGGGGTGGACGGTaGTTGCTCAGAACTGGAACTGCAGGCTCTCCCTCTGCACTTGAC | + |
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Preference number: 5 (lower is better) Translates to: NEALTVLPFRGWGGR*LLRTGTAGSPSALD Trigger: GTCAAGTGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGCAACCACCGTCCACCCCAACCCCTGAAGGGCAGAACAGTCAGAGCCTCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATCTGCCCTTCAGGGGTaGGGGTGGACGGTGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSSALQG*GWTVVA Trigger: AGCAACCACCGTCCACCCCAACCCCTGAAGGGCAGA...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGTCTGCCCTTCAGGGGTaGGGGTGGACGGTGGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: NRDPFIGCCCRGGQVLIESALQG*GWTVVA Trigger: AGCAACCACCGTCCACCCCAACCCCTGAAGGGCAGA...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS GCA 90 bp | CAGGCTTGGGTTGGCTGGACCAACCTTCATCAAAACGCCAAGGATTaGCAGGCCATCAGCCTTGGAGATGGCTTCAGAAGCACTGGAGTA | + |
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Preference number: 5 (lower is better) Translates to: QAWVGWTNLHQNAKD*QAISLGDGFRSTGV Trigger: TACTCCAGTGCTTCTGAAGCCATCTCCAAGGCTGATGGCCTGGCAATCCTTGGCGTTTTGATGAAGGTTGGTCCAGCCAACCCAAGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094365.11 ENSMUST00000144327.3 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCAGCTCTCCCTCTGCACTaGACAGAAGACCACGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSALPLH*TEDHGA Trigger: AGCTCCGTGGTCTTCTGTCAAGTGCAGAGGGAGAGC...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATGGGGTGGACGGTGGTaGCTCAGAACTGGAACTGCA | + |
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Preference number: 5 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSWGGRW*LRTGTA Trigger: TGCAGTTCCAGTTCTGAGCAACCACCGTCCACCCCA...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS TCA 90 bp | TTGACAGAAGACCACGGAGCTGGGCCAGCTGCTCTGGGCTTAGACTaGTGCTATCCTTGCAGATCACCCAGGTCACACTTTCATGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: LTEDHGAGPAALGLD*CYPCRSPRSHFHEE Trigger: CTCTTCATGAAAGTGTGACCTGGGTGATCTGCAAGGATAGCATCAGTCTAAGCCCAGAGCAGCTGGCCCAGCTCCGTGGTCTTCTGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGCCAGGCCATCAGCCTaGGAGATGGCTTCAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEARPSA*EMASEA Trigger: TGCTTCTGAAGCCATCTCCAAGGCTGATGGCCTGGC...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCAGTACTTTCTGCAGGCTaGGGTTGGCTGGACCAACCT | + |
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Preference number: 5 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSVLSAG*GWLDQP Trigger: AGGTTGGTCCAGCCAACCCAAGCCTGCAGAAAGTAC...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGCAATGGGATACAGCTaGCTCCATTGGTCAGGACCA | + |
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Preference number: 5 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEAMGYS*LHWSGP Trigger: TGGTCCTGACCAATGGAGCAAGCTGTATCCCATTGC...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGCCAGGCCATCAGCCTaGGAGATGGCTTCAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQARPSA*EMASEA Trigger: TGCTTCTGAAGCCATCTCCAAGGCTGATGGCCTGGC...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTGTACTTTCTGCAGGCTaGGGTTGGCTGGACCAACCT | + |
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Preference number: 5 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLVLSAG*GWLDQP Trigger: AGGTTGGTCCAGCCAACCCAAGCCTGCAGAAAGTAC...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | ATTCTGTTTCTTAATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGCTCTCCCTCTGCACTaGACAGAAGACCACGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: ILFLNRDPFIGCCCRGGQALPLH*TEDHGA Trigger: AGCTCCGTGGTCTTCTGTCAAGTGCAGAGGGAGAGC...CTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATTAAGAAACAGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGATACAGCTTGCTCCATaGGTCAGGACCATTTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEIQLAP*VRTIFA Trigger: AGCGAAAATGGTCCTGACCAATGGAGCAAGCTGTAT...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | AATCGTGATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTGGTTGTTTCCATaGGCAATGGGATACAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: NRDPFIGCCCRGGQVLIEDWLFP*AMGYSL Trigger: CAAGCTGTATCCCATTGCCAATGGAAACAACCAGTC...CTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATCACGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATCAATAGGAGACTGGTaGTTTCCATTGGCAATGGGA | + |
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Preference number: 5 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSSIGDW*FPLAMG Trigger: TCCCATTGCCAATGGAAACAACCAGTCTCCTATTGA...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTATACAGCTTGCTCCATaGGTCAGGACCATTTTCGCT | + |
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Preference number: 5 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLIQLAP*VRTIFA Trigger: AGCGAAAATGGTCCTGACCAATGGAGCAAGCTGTAT...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTGACTGGTTGTTTCCATaGGCAATGGGATACAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLDWLFP*AMGYSL Trigger: CAAGCTGTATCCCATTGCCAATGGAAACAACCAGTC...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | TTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCATTCCTTTCAATAGGAGACTGGTaGTTTCCATTGGCAATGGGA | + |
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Preference number: 5 (lower is better) Translates to: FIGCCCRGGQVLIEDSFLSIGDW*FPLAMG Trigger: TCCCATTGCCAATGGAAACAACCAGTCTCCTATTGA...AAGGAATGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS-3UTR CAA 90 bp | GATCCCTTTATTGGATGCTGCTGTAGAGGGGGCCAGGTCCTAATTGAGGACTCAACCTTTCAGAACAGATaGGTTGCTACTGTCATCAAA | + |
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Preference number: 5 (lower is better) Translates to: DPFIGCCCRGGQVLIEDSTFQNR*VATVIK Trigger: TTTGATGACAGTAGCAACCAATCTGTTCTGAAAGGT...TGAGTCCTCAATTAGGACCTGGCCCCCTCTACAGCAGCATCCAATAAAGGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CCA 90 bp | GTTAACAATTTCTTTGGCAGTTGCAGGATTATAGGAGATGCTGAGTaGTTTCAGAGAGGAGTCATGATTGGCTTCACTGGTTTTAATATC | + |
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Preference number: 5 (lower is better) Translates to: VNNFFGSCRIIGDAE*FQRGVMIGFTGFNI Trigger: GATATTAAAACCAGTGAAGCCAATCATGACTCCTCTCTGAAACCACTCAGCATCTCCTATAATCCTGCAACTGCCAAAGAAATTGTTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS TCA 72 bp | GCTCAGAACTGGAACTGCAGGCTCTCCCTCTGCACTTaGCAGAAGACCACGGAGCTGGGCCAGCTGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: AQNWNCRLSLCT*QKTTELGQLLW Trigger: CCAGAGCAGCTGGCCCAGCTCCGTGGTCTTCTGTCAAGTGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS GCA 72 bp | CTGTTCTGCCCTTCAGGGGTTGGGGTGGACGGTGGTTaGTCAGAACTGGAACTGCAGGCTCTCCCTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LFCPSGVGVDGG*SELELQALPLH Trigger: GTGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGCAACCACCGTCCACCCCAACCCCTGAAGGGCAGAACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 90 bp | GACGGTGGTTGCTCAGAACTGGAACTGCAGGCTCTCCCTCTGCACTaGACAGAAGACCACGGAGCTGGGCCAGCTGCTCTGGGCTTAGAC | + |
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Preference number: 6 (lower is better) Translates to: DGGCSELELQALPLH*TEDHGAGPAALGLD Trigger: GTCTAAGCCCAGAGCAGCTGGCCCAGCTCCGTGGTCTTCTGTCAAGTGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGCAACCACCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 72 bp | TGCTCAGAACTGGAACTGCAGGCTCTCCCTCTGCACTaGACAGAAGACCACGGAGCTGGGCCAGCTGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: CSELELQALPLH*TEDHGAGPAAL Trigger: CAGAGCAGCTGGCCCAGCTCCGTGGTCTTCTGTCAAGTGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 72 bp | ACTGTTCTGCCCTTCAGGGGTTGGGGTGGACGGTGGTaGCTCAGAACTGGAACTGCAGGCTCTCCCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: TVLPFRGWGGRW*LRTGTAGSPSA Trigger: TGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGCAACCACCGTCCACCCCAACCCCTGAAGGGCAGAACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 90 bp | GAGGCTCTGACTGTTCTGCCCTTCAGGGGTTGGGGTGGACGGTGGTaGCTCAGAACTGGAACTGCAGGCTCTCCCTCTGCACTTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: EALTVLPFRGWGGRW*LRTGTAGSPSALDR Trigger: TCTGTCAAGTGCAGAGGGAGAGCCTGCAGTTCCAGTTCTGAGCAACCACCGTCCACCCCAACCCCTGAAGGGCAGAACAGTCAGAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS TCA 72 bp | GACCACGGAGCTGGGCCAGCTGCTCTGGGCTTAGACTaGTGCTATCCTTGCAGATCACCCAGGTCACACTTT | + |
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Preference number: 6 (lower is better) Translates to: DHGAGPAALGLD*CYPCRSPRSHF Trigger: AAAGTGTGACCTGGGTGATCTGCAAGGATAGCATCAGTCTAAGCCCAGAGCAGCTGGCCCAGCTCCGTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 90 bp | GCAGGCTTGGGTTGGCTGGACCAACCTTCATCAAAACGCCAAGGATaGCCAGGCCATCAGCCTTGGAGATGGCTTCAGAAGCACTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: AGLGWLDQPSSKRQG*PGHQPWRWLQKHWS Trigger: ACTCCAGTGCTTCTGAAGCCATCTCCAAGGCTGATGGCCTGGCAATCCTTGGCGTTTTGATGAAGGTTGGTCCAGCCAACCCAAGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CCA 72 bp | CAAAATGAGGCTCTGACTGTTCTGCCCTTCAGGGGTTaGGGTGGACGGTGGTTGCTCAGAACTGGAACTGCA | + |
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Preference number: 6 (lower is better) Translates to: QNEALTVLPFRG*GGRWLLRTGTA Trigger: TGCAGTTCCAGTTCTGAGCAACCACCGTCCACCCCAACCCCTGAAGGGCAGAACAGTCAGAGCCTCATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 72 bp | GGTTGGCTGGACCAACCTTCATCAAAACGCCAAGGATaGCCAGGCCATCAGCCTTGGAGATGGCTTCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: GWLDQPSSKRQG*PGHQPWRWLQK Trigger: CTTCTGAAGCCATCTCCAAGGCTGATGGCCTGGCAATCCTTGGCGTTTTGATGAAGGTTGGTCCAGCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094365.11 ENSMUST00000144327.3 ENSMUST00000181860.8 |
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| CDS TCA 72 bp | GGTCGTTTGAGTTGCCCCAGTGAAAATGGAACTGAGTaGGCCGATAGCTATCAGCAAGAGGGCCACCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: GRLSCPSENGTE*ADSYQQEGHLS Trigger: TGAAAGGTGGCCCTCTTGCTGATAGCTATCGGCTCACTCAGTTCCATTTTCACTGGGGCAACTCAAACGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094365.11 ENSMUST00000144327.3 ENSMUST00000181860.8 |
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| CDS CAA 72 bp | TTCATCAAAACGCCAAGGATTGCCAGGCCATCAGCCTaGGAGATGGCTTCAGAAGCACTGGAGTACTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: FIKTPRIARPSA*EMASEALEYFA Trigger: TGCAAAGTACTCCAGTGCTTCTGAAGCCATCTCCAAGGCTGATGGCCTGGCAATCCTTGGCGTTTTGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094365.11 ENSMUST00000144327.3 ENSMUST00000181860.8 |
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| CDS CAA 90 bp | GTTTTAACTGAGTTTAGAGCATCAAGTACTTTCTGCAGGCTTGGGTaGGCTGGACCAACCTTCATCAAAACGCCAAGGATTGCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VLTEFRASSTFCRLG*AGPTFIKTPRIARP Trigger: TGGCCTGGCAATCCTTGGCGTTTTGATGAAGGTTGGTCCAGCCAACCCAAGCCTGCAGAAAGTACTTGATGCTCTAAACTCAGTTAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS GCA 72 bp | GAGACTGGTTGTTTCCATTGGCAATGGGATACAGCTTaGTCCATTGGTCAGGACCATTTTCGCTTCCATATC | + |
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Preference number: 6 (lower is better) Translates to: ETGCFHWQWDTA*SIGQDHFRFHI Trigger: GATATGGAAGCGAAAATGGTCCTGACCAATGGAGCAAGCTGTATCCCATTGCCAATGGAAACAACCAGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CCA 72 bp | TTGTTTCCATTGGCAATGGGATACAGCTTGCTCCATTaGTCAGGACCATTTTCGCTTCCATATCCCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: LFPLAMGYSLLH*SGPFSLPYPQS Trigger: AGACTGGGGATATGGAAGCGAAAATGGTCCTGACCAATGGAGCAAGCTGTATCCCATTGCCAATGGAAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CCA 72 bp | AGTTTAGAGCATCAAGTACTTTCTGCAGGCTTGGGTTaGCTGGACCAACCTTCATCAAAACGCCAAGGATTG | + |
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Preference number: 6 (lower is better) Translates to: SLEHQVLSAGLG*LDQPSSKRQGL Trigger: CAATCCTTGGCGTTTTGATGAAGGTTGGTCCAGCCAACCCAAGCCTGCAGAAAGTACTTGATGCTCTAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 72 bp | GAGTTTAGAGCATCAAGTACTTTCTGCAGGCTTGGGTaGGCTGGACCAACCTTCATCAAAACGCCAAGGATT | + |
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Preference number: 6 (lower is better) Translates to: EFRASSTFCRLG*AGPTFIKTPRI Trigger: AATCCTTGGCGTTTTGATGAAGGTTGGTCCAGCCAACCCAAGCCTGCAGAAAGTACTTGATGCTCTAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 90 bp | ATATCAATAGGAGACTGGTTGTTTCCATTGGCAATGGGATACAGCTaGCTCCATTGGTCAGGACCATTTTCGCTTCCATATCCCCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISIGDWLFPLAMGYS*LHWSGPFSLPYPQS Trigger: AGACTGGGGATATGGAAGCGAAAATGGTCCTGACCAATGGAGCAAGCTGTATCCCATTGCCAATGGAAACAACCAGTCTCCTATTGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS TCA 72 bp | CAATTTCTTTGGCAGTTGCAGGATTATAGGAGATGCTaGGTGGTTTCAGAGAGGAGTCATGATTGGCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: QFLWQLQDYRRC*VVSERSHDWLH Trigger: GTGAAGCCAATCATGACTCCTCTCTGAAACCACTCAGCATCTCCTATAATCCTGCAACTGCCAAAGAAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS GCA 72 bp | TATCAGCAAGAGGGCCACCTTTCAGAACAGATTGGTTaGTACTGTCATCAAAAATTACATGGAAAGAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: YQQEGHLSEQIG*YCHQKLHGKNV Trigger: GACATTCTTTCCATGTAATTTTTGATGACAGTAGCAACCAATCTGTTCTGAAAGGTGGCCCTCTTGCTGATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 72 bp | CTATCAGCAAGAGGGCCACCTTTCAGAACAGATTGGTaGCTACTGTCATCAAAAATTACATGGAAAGAATGT | + |
|
Preference number: 6 (lower is better) Translates to: LSARGPPFRTDW*LLSSKITWKEC Trigger: ACATTCTTTCCATGTAATTTTTGATGACAGTAGCAACCAATCTGTTCTGAAAGGTGGCCCTCTTGCTGATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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| CDS CAA 72 bp | ATAGCTATCAGCAAGAGGGCCACCTTTCAGAACAGATaGGTTGCTACTGTCATCAAAAATTACATGGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: IAISKRATFQNR*VATVIKNYMER Trigger: TCTTTCCATGTAATTTTTGATGACAGTAGCAACCAATCTGTTCTGAAAGGTGGCCCTCTTGCTGATAGCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094365.11 ENSMUST00000181860.8 |
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