Pregenerated sensors for CAPZB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028745Ensembl transcript IDs: ENSMUST00000030518.16, ENSMUST00000042675.9, ENSMUST00000102507.10, ENSMUST00000102508.10, ENSMUST00000131912.8, ENSMUST00000138045.8, ENSMUST00000145368.8
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCACCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTaGAGGACAGTGCTGAGGACATCACTCCTTCCTCCACTGCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: PTPPQHGLLGTRVHL*RTVLRTSLLPPLLS Trigger: GGACAGCAGTGGAGGAAGGAGTGATGTCCTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGGTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR CCA 90 bp | TCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTaGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: SMETSWEAGLGARGG*LSDFILGERWRCVV Trigger: GACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR CCA 90 bp | GGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATaGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: GARGGWLSDFILGER*RCVVDANCYVTCQG Trigger: GCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR GCA 90 bp | AGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTaGGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAA | + |
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Preference number: 1 (lower is better) Translates to: RGGWLSDFILGERWR*VVDANCYVTCQGGK Trigger: TTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR TCA 90 bp | TCTAAAGAAAGGAACCTAACGAGTGCATGGCGTGTCCGGTTAGCGTaGAGCAGAGGTCTTCAACACTGCTGCTTTCTCTTCAAGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: SKERNLTSAWRVRLA*SRGLQHCCFLFKAS Trigger: GGAGGCCTTGAAGAGAAAGCAGCAGTGTTGAAGACCTCTGCTTCACGCTAACCGGACACGCCATGCACTCGTTAGGTTCCTTTCTTTAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACACCCTGTCCCCAGCCCTaGCTCCAAGCAACTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: PTPPQHGLLGTRVHLCRTPCPQP*LQATPT Trigger: TGTGGGAGTTGCTTGGAGTCAGGGCTGGGGACAGGG...TGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR GCA 90 bp | CCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGCGCTGCGTGGTCGATaGAAACTGTTATGTGACCTG | + |
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Preference number: 2 (lower is better) Translates to: PHGLYGNVVGSRPWSQRRALRGR*KLLCDL Trigger: CAGGTCACATAACAGTTTGCATCGACCACGCAGCGC...CCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR CCA 90 bp | CCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGTATCGGACTTTATTTTaGGGGAGAGATGGCGCTGCG | + |
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Preference number: 2 (lower is better) Translates to: PPQHGLLGTRVHLCRTVLYRTLF*GRDGAA Trigger: CGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATA...CAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR CCA 90 bp | ACAAAACCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGGTGGGAAGCAGGCCTTaGAGCCAGAGGAGGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: TKPHGLYGNVVGSRPWSQVGSRP*SQRRVV Trigger: AACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCAC...CTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGTTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR CCA 90 bp | CCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGACCACACGGTCTCTATaGAAACGTCGTGGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: PHGLYGNVVGSRPWSQRRTTRSL*KRRGKQ Trigger: CTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGT...CCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR GCA 90 bp | GGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTGGTCTTCAACACTGCTaGTTTCTCTTCAAGGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: GLYGNVVGSRPWSQRRVVGLQHC*FLFKAS Trigger: GGAGGCCTTGAAGAGAAAGCAGCAGTGTTGAAGACC...AACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| 3UTR CAA 90 bp | GAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTaGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTG | + |
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Preference number: 2 (lower is better) Translates to: EAGLGARGGWLSDFI*GERWRCVVDANCYV Trigger: CACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGATGCAAACTGTTATGTaGCCTGTCAGGGCGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PEEGGYRTLFWGRDGAAWMQTVM*PVRAGK Trigger: CTTTCCCGCCCTGACAGGTCACATAACAGTTTGCAT...CCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGCAAGGGTGGGAAGCAGGCCTTaGAGCCAGAGGAGGGTGGTT | + |
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Preference number: 2 (lower is better) Translates to: KDGGSGVRQCICAYKWARVGSRP*SQRRVV Trigger: AACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCAC...CCTTGCCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR CCA 90 bp | ACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTACCACACGGTCTCTATaGAAACGTCGTGGGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TSWEAGLGARGGWLSDFITTRSL*KRRGKQ Trigger: CTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGT...AATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTATGCAAACTGTTATGTaGCCTGTCAGGGCGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SQRRVVIGLYFGGEMALRMQTVM*PVRAGK Trigger: CTTTCCCGCCCTGACAGGTCACATAACAGTTTGCAT...ACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR TCA 90 bp | GTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAAAAGCGCTTCTTGCTTTaGTTTGTCTGCAAACGTCTG | + |
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Preference number: 2 (lower is better) Translates to: VVIGLYFGGEMALRGRCKKRFLL*FVCKRL Trigger: CAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTT...TTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTTCTTAAGCGCTTCTTaGTTTGATTTGTCTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PEEGGYRTLFWGRDGAAWFLSAS*FDLSAN Trigger: GTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAA...CCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| 3UTR-3UTR CAA 90 bp | ACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGAGCGTGGGAAGCAGGCCTaGGAGCCAGAGGAGGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: TPAWSPWDKGPPVQDSAERGKQA*EPEEGG Trigger: ACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACG...CTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR CAA 90 bp | CCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCCCCAGCATGGTCTCCTaGGGACAAGGGTCCACCTGT | + |
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Preference number: 3 (lower is better) Translates to: PHPSMVSLGQGSTCAGQCPSMVS*GQGSTC Trigger: ACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGG...GCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR TCA 72 bp | TCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTaGGGACATCACTCCTTCCTCCACTGCTGTCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: SLGQGSTCAGQC*GHHSFLHCCPL Trigger: CAGGGGACAGCAGTGGAGGAAGGAGTGATGTCCTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR GCA 72 bp | CCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTaGAGGACAGTGCTGAGGACATCACTCCTTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: PQHGLLGTRVHL*RTVLRTSLLPP Trigger: TGGAGGAAGGAGTGATGTCCTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR CCA 72 bp | ACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTaGTTATCGGACTTTATTTTGGGGGAGAGATGGCGC | + |
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Preference number: 3 (lower is better) Translates to: TSWEAGLGARGG*LSDFILGERWR Trigger: GCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR TCA 72 bp | GGCCTCCACCAGGTCGTTCTTAAGCGCTTCTTGCTTTaGTTTGTCTGCAAACGTCTGCACAGACCTGGGTCG | + |
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Preference number: 3 (lower is better) Translates to: GLHQVVLKRFLL*FVCKRLHRPGS Trigger: CGACCCAGGTCTGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAACGACCTGGTGGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| 3UTR GCA 72 bp | CTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATaGAAACTGTTATGTGACCTGTCAGGGCGGGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: LYFGGEMALRGR*KLLCDLSGRER Trigger: CCTTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR CCA 72 bp | TTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTaGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACT | + |
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Preference number: 3 (lower is better) Translates to: LEPEEGGYRTLF*GRDGAAWSMQT Trigger: AGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR CCA 72 bp | GGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATaGGCAAGGGAAGGAAGGGGGACAGGCGAACAAAAC | + |
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Preference number: 3 (lower is better) Translates to: GSGVRQCICAYK*AREGRGTGEQN Trigger: GTTTTGTTCGCCTGTCCCCCTTCCTTCCCTTGCCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR CAA 90 bp | CAATGTAACAAAAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATACGTGGGAAGCAGGCCTaGGAGCCAGAGGAGGGTGGT | + |
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Preference number: 3 (lower is better) Translates to: QCNKKMEGAVSDSVSVPIRGKQA*EPEEGG Trigger: ACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACG...TATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTTTTGTTACATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR TCA 72 bp | AGGAACCTAACGAGTGCATGGCGTGTCCGGTTAGCGTaGAGCAGAGGTCTTCAACACTGCTGCTTTCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: RNLTSAWRVRLA*SRGLQHCCFLF Trigger: GAAGAGAAAGCAGCAGTGTTGAAGACCTCTGCTTCACGCTAACCGGACACGCCATGCACTCGTTAGGTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| 3UTR CCA 72 bp | CACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTaGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTT | + |
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Preference number: 3 (lower is better) Translates to: HGLYGNVVGSRP*SQRRVVIGLYF Trigger: AAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR-3UTR CAA 90 bp | TGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAAGGAGCTTCTTGCTTTGATTaGTCTGCAAACGTCTGCACA | + |
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Preference number: 3 (lower is better) Translates to: WRCVVDANCYVTCQGGKGASCFD*SANVCT Trigger: TGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGC...TCCTTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| 3UTR GCA 72 bp | TGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTaGGTGGTCGATGCAAACTGTTATGTGACCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: WLSDFILGERWR*VVDANCYVTCQ Trigger: CTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| 3UTR GCA 72 bp | TTCAAGGCCTCCACCAGGTCGTTCTTAAGCGCTTCTTaGTTTGATTTGTCTGCAAACGTCTGCACAGACCTG | + |
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Preference number: 3 (lower is better) Translates to: FKASTRSFLSAS*FDLSANVCTDL Trigger: CAGGTCTGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAACGACCTGGTGGAGGCCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| 3UTR-3UTR CAA 90 bp | AACAAAAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGTTATCGGACTTTATTTaGGGGGAGAGATGGCGCTGC | + |
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Preference number: 3 (lower is better) Translates to: NKKMEGAVSDSVSVPINGLSDFI*GERWRC Trigger: GCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAA...CCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTTTTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR GCA 90 bp | CCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCCTCCCAGGTTCATGGTaGCCGAGCCGGATTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: PHPSMVSLGQGSTCAGQCLPGSW*PSRICW Trigger: CCAACAAATCCGGCTCGGGCACCATGAACCTGGGAG...GCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | CCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCGCCGAGCAGATGGCATaGCCCCATCTTCCAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PHPSMVSLGQGSTCAGQCAEQMA*PHLPKE Trigger: CTCCTTTGGAAGATGGGGCCATGCCATCTGCTCGGC...GCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | CCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCCCAGGCGCCCGATGTTaGCTATGTGTGGGGAACAGT | + |
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Preference number: 4 (lower is better) Translates to: PHPSMVSLGQGSTCAGQCPGARC*LCVGNS Trigger: ACTGTTCCCCACACATAGCCAACATCGGGCGCCTGG...GCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | CCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGCTTCTCAATCTGCTGTaGAGGCAGGCGCCTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: PPQHGLLGTRVHLCRTVLLLNLL*RQAPHQ Trigger: CTGATGAGGCGCCTGCCTCCACAGCAGATTGAGAAG...CAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | CCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGTCTGAGCCGAGCAGATaGCATGGCCCCATCTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: PPQHGLLGTRVHLCRTVLSEPSR*HGPIFQ Trigger: TTGGAAGATGGGGCCATGCCATCTGCTCGGCTCAGA...CAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | CCCACCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGGTCGAAGGCATTGTTaGCCTCTACCTCCAGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: PTPPQHGLLGTRVHLCRTGRRHC*PLPPAF Trigger: GAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACC...TGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR GCA 90 bp | CACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTCTGTCTGGTTAGGCTaGCTCCCAGGTTCATGGTGC | + |
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Preference number: 4 (lower is better) Translates to: HTVSMETSWEAGLGARGGSVWLG*LPGSWC Trigger: GCACCATGAACCTGGGAGGCAGCCTAACCAGACAGA...CCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR GCA 90 bp | ACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGAGTCTGTCTGGTTAGGCTaGCTCCCAGGTTCATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TPAWSPWDKGPPVQDSAESVWLG*LPGSWC Trigger: GCACCATGAACCTGGGAGGCAGCCTAACCAGACAGA...CTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGGCCGAGCAGATGGCATaGCCCCATCTTCCAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LWKRRGKQALEPEEGGYRAEQMA*PHLPKE Trigger: CTCCTTTGGAAGATGGGGCCATGCCATCTGCTCGGC...CCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGAGGGGTCGAAGGCATTGTTaGCCTCTACCTCCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PQHGLLGTRVHLCRTVLRGRRHC*PLPPAF Trigger: GAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACC...CCTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGCCAGGCGCCCGATGTTaGCTATGTGTGGGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LWKRRGKQALEPEEGGYRPGARC*LCVGNS Trigger: ACTGTTCCCCACACATAGCCAACATCGGGCGCCTGG...CCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | GAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTGCCGAGCAGATGGCATaGCCCCATCTTCCAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ETSWEAGLGARGGWLSDFAEQMA*PHLPKE Trigger: CTCCTTTGGAAGATGGGGCCATGCCATCTGCTCGGC...AAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGGCCATAGCATCACCGTaGAGGTCAACTTGTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPQHGLLGTRVHLCRTVLAIASP*RSTCNG Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTATGGC...CAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | ATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAAGGCCAGGCGCCCGATGTTaGCTATGTGTGGGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: MALRGRCKLLCDLSGRERPGARC*LCVGNS Trigger: ACTGTTCCCCACACATAGCCAACATCGGGCGCCTGG...CCTTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR TCA 90 bp | ACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTCTACCTCCAGCTTTCTaGGCCGAGCAGATGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TSWEAGLGARGGWLSDFILPPAF*AEQMAW Trigger: CCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAG...AATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR TCA 90 bp | CGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGCTACCTCCAGCTTTCTaGGCCGAGCAGATGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQALEPEEGGYRTLFWLPPAF*AEQMAW Trigger: CCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAG...CCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAAGGTTCTTCTCAATCTaGTGTGGAGGCAGGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EMALRGRCKLLCDLSGRERFFSI*CGGRRL Trigger: GAGGCGCCTGCCTCCACAGCAGATTGAGAAGAACCT...TTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | CTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCCTCCCAGGTTCATGGTaGCCGAGCCGGATTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGARGGWLSDFILGERWRLPGSW*PSRICW Trigger: CCAACAAATCCGGCTCGGGCACCATGAACCTGGGAG...GCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | GAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTTCTGTCTGGTTAGGCTaGCTCCCAGGTTCATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ETSWEAGLGARGGWLSDFSVWLG*LPGSWC Trigger: GCACCATGAACCTGGGAGGCAGCCTAACCAGACAGA...AAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGCTTCTCAATCTGCTGTaGAGGCAGGCGCCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEEGGYRTLFWGRDGAAWLLNLL*RQAPHQ Trigger: CTGATGAGGCGCCTGCCTCCACAGCAGATTGAGAAG...CCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTCCACCACCTTGTCTCTaGCAATTTTCAGGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLYGNVVGSRPWSQRRVVPPPCL*QFSGAG Trigger: ACCAGCCCCTGAAAATTGCCAGAGACAAGGTGGTGG...AACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGGGTCGAAGGCATTGTTaGCCTCTACCTCCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWKRRGKQALEPEEGGYRGRRHC*PLPPAF Trigger: GAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACC...CCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGAGGGATGTTGGCTATGTGTaGGGAACAGTCACTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PQHGLLGTRVHLCRTVLRDVGYV*GTVTHS Trigger: ACTGTGAGTGACTGTTCCCCACACATAGCCAACATC...CCTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCCAGGCGCCCGATGTTaGCTATGTGTGGGGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLGARGGWLSDFILGERWPGARC*LCVGNS Trigger: ACTGTTCCCCACACATAGCCAACATCGGGCGCCTGG...CCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAATTGTCTGCAAACGTCTaGACAGACCTCAGCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EMALRGRCKLLCDLSGRELSANV*TDLSPL Trigger: CAACGGGCTGAGGTCTGTGCAGACGTTTGCAGACAA...TTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | AGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTCTTCTCAATCTGCTGTaGAGGCAGGCGCCTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQRRVVIGLYFGGEMALRLLNLL*RQAPHQ Trigger: CTGATGAGGCGCCTGCCTCCACAGCAGATTGAGAAG...ACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | CAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGAGGACAGATCTTCACACAGACTaGGGACCAGGTCGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLGTRVHLCRTVLRTDLHTD*GPGRSD Trigger: ATCTGATCGACCTGGTCCCCAGTCTGTGTGAAGATC...TGTCCTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | ATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAAGGCCACCACCTTGTCTCTaGCAATTTTCAGGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MALRGRCKLLCDLSGRERPPPCL*QFSGAG Trigger: ACCAGCCCCTGAAAATTGCCAGAGACAAGGTGGTGG...CCTTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | AGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTTCTGAGCCGAGCAGATaGCATGGCCCCATCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQRRVVIGLYFGGEMALRSEPSR*HGPIFQ Trigger: TTGGAAGATGGGGCCATGCCATCTGCTCGGCTCAGA...ACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | AACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTCTGAGCCGAGCAGATaGCATGGCCCCATCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NVVGSRPWSQRRVVIGLYSEPSR*HGPIFQ Trigger: TTGGAAGATGGGGCCATGCCATCTGCTCGGCTCAGA...ATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | GGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTTACAGGTCTCGGTATTaGTCGAAGGCATTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLYGNVVGSRPWSQRRVVYRSRY*SKALLA Trigger: GGCCAACAATGCCTTCGACCAATACCGAGACCTGTA...AACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | AGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTTGCACTTCCACCACGTaGATGGAATCCCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRRVVIGLYFGGEMALRCTSTT*MESQQP Trigger: AGGCTGCTGGGATTCCATCCACGTGGTGGAAGTGCA...ACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | GAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGGCCATAGCATCACCGTaGAGGTCAACTTGTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERWRCVVDANCYVTCQGGAIASP*RSTCNG Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTATGGC...CCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR GCA 90 bp | TGCATGGCGTGTCCGGTTAGCGTGAAGCAGAGGTCTTCAACACTGCTGCTTTCTAGGTTCTTCTCAATCTaGTGTGGAGGCAGGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CMACPVSVKQRSSTLLLSRFFSI*CGGRRL Trigger: GAGGCGCCTGCCTCCACAGCAGATTGAGAAGAACCT...AGAAAGCAGCAGTGTTGAAGACCTCTGCTTCACGCTAACCGGACACGCCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| CDS-3UTR GCA 90 bp | CCTATAAATGGGCAAGGGAAGGAAGGGGGACAGGCGAACAAAACCACACGGTCTTCTGTCTGGTTAGGCTaGCTCCCAGGTTCATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PINGQGKEGGQANKTTRSSVWLG*LPGSWC Trigger: GCACCATGAACCTGGGAGGCAGCCTAACCAGACAGA...AGACCGTGTGGTTTTGTTCGCCTGTCCCCCTTCCTTCCCTTGCCCATTTATAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR GCA 90 bp | ACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGTCTGCAAACGTCTaGACAGACCTCAGCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSWEAGLGARGGWLSDFILSANV*TDLSPL Trigger: CAACGGGCTGAGGTCTGTGCAGACGTTTGCAGACAA...AATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | TATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGGCCGAGCAGATGGCATaGCCCCATCTTCCAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YFGGEMALRGRCKLLCDLAEQMA*PHLPKE Trigger: CTCCTTTGGAAGATGGGGCCATGCCATCTGCTCGGC...CAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGGTCGAAGGCATTGTTaGCCTCTACCTCCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSRPWSQRRVVIGLYFGGGRRHC*PLPPAF Trigger: GAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACC...TCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | AAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGATGCACTTCCACCACGTaGATGGAATCCCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KQALEPEEGGYRTLFWGRCTSTT*MESQQP Trigger: AGGCTGCTGGGATTCCATCCACGTGGTGGAAGTGCA...TCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | TCCATAAAAATTGACAGAAAAGCACCTGGCCTGAAGAGCAGCCGGTCGCCAGCCTGCACTTCCACCACGTaGATGGAATCCCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIKIDRKAPGLKSSRSPACTSTT*MESQQP Trigger: AGGCTGCTGGGATTCCATCCACGTGGTGGAAGTGCA...GGCTGGCGACCGGCTGCTCTTCAGGCCAGGTGCTTTTCTGTCAATTTTTATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CCA 90 bp | CCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGGCCATAGCATCACCGTaGAGGTCAACTTGTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEEGGYRTLFWGRDGAAWAIASP*RSTCNG Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTATGGC...CCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | TGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAAGGACCGAGCCGGATTTGTTaGTTTGCAGCCATAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WRCVVDANCYVTCQGGKGPSRIC*FAAIAS Trigger: TGATGCTATGGCTGCAAACCAACAAATCCGGCTCGG...TCCTTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGCTGAGGACAGATGTTGGCTATGTGTaGGGAACAGTCACTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: QHGLLGTRVHLCRTVLRTDVGYV*GTVTHS Trigger: ACTGTGAGTGACTGTTCCCCACACATAGCCAACATC...TGTCCTCAGCACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR TCA 90 bp | AAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGCAAGGCTACCTCCAGCTTTCTaGGCCGAGCAGATGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KDGGSGVRQCICAYKWARLPPAF*AEQMAW Trigger: CCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAG...CCTTGCCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | ACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTCCGGATTTGTTGGTTTaGAGCCATAGCATCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TSWEAGLGARGGWLSDFIPDLLV*SHSITV Trigger: CACGGTGATGCTATGGCTGCAAACCAACAAATCCGG...AATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGACCGGATTTGTTGGTTTaGAGCCATAGCATCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSRPWSQRRVVIGLYFGGPDLLV*SHSITV Trigger: CACGGTGATGCTATGGCTGCAAACCAACAAATCCGG...TCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTCCCAGGTTCATGGTaGCCGAGCCGGATTTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFGGEMALRGRCKLLCDLPGSW*PSRICW Trigger: CCAACAAATCCGGCTCGGGCACCATGAACCTGGGAG...GTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | CCACCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTTCTTAAGCGCTTCTTaGTTTGATTTGTCTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPHPSMVSLGQGSTCAGQFLSAS*FDLSAN Trigger: GTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAA...CTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCGATCTTCACACAGACTaGGGACCAGGTCGATCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVVIGLYFGGEMALRGRCDLHTD*GPGRSD Trigger: ATCTGATCGACCTGGTCCCCAGTCTGTGTGAAGATC...GCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | AAACCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGGCAATTTTCAGGGGCTaGTCAACAGATGACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPHGLYGNVVGSRPWSQRAIFRG*STDDRR Trigger: TCTCCTGTCATCTGTTGACCAGCCCCTGAAAATTGC...CCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAAATGGGCAAGGGAAGGAAGGGGGACAGGCGAACAAAACCACACGGTCTCCACCACCTTGTCTCTaGCAATTTTCAGGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PINGQGKEGGQANKTTRSPPPCL*QFSGAG Trigger: ACCAGCCCCTGAAAATTGCCAGAGACAAGGTGGTGG...AGACCGTGTGGTTTTGTTCGCCTGTCCCCCTTCCTTCCCTTGCCCATTTATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | ACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTACAGGTCTCGGTATTaGTCGAAGGCATTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSWEAGLGARGGWLSDFIYRSRY*SKALLA Trigger: GGCCAACAATGCCTTCGACCAATACCGAGACCTGTA...AATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | ACAAAACCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGTACAGGTCTCGGTATTaGTCGAAGGCATTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKPHGLYGNVVGSRPWSQYRSRY*SKALLA Trigger: GGCCAACAATGCCTTCGACCAATACCGAGACCTGTA...CTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGACCGAGCCGGATTTGTTaGTTTGCAGCCATAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRPWSQRRVVIGLYFGGPSRIC*FAAIAS Trigger: TGATGCTATGGCTGCAAACCAACAAATCCGGCTCGG...TCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | GGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCCGAGCCGGATTTGTTaGTTTGCAGCCATAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGARGGWLSDFILGERWPSRIC*FAAIAS Trigger: TGATGCTATGGCTGCAAACCAACAAATCCGGCTCGG...CCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR TCA 90 bp | AACGAGTTTTCTAAAGAAAGGAACCTAACGAGTGCATGGCGTGTCCGGTTAGCGCTACCTCCAGCTTTCTaGGCCGAGCAGATGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NEFSKERNLTSAWRVRLALPPAF*AEQMAW Trigger: CCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAG...CGCTAACCGGACACGCCATGCACTCGTTAGGTTCCTTTCTTTAGAAAACTCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR TCA 90 bp | TTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTCAGACCTCAGCCCGTTaGCGATGTCCTTTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LEPEEGGYRTLFWGRDGAQTSAR*RCPLFF Trigger: GAAAAACAAAGGACATCGTCAACGGGCTGAGGTCTG...AGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS-3UTR TCA 90 bp | ACAAAACCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGGAGATCTCAGCCCGTTaGCGATGTCCTTTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TKPHGLYGNVVGSRPWSQEISAR*RCPLFF Trigger: GAAAAACAAAGGACATCGTCAACGGGCTGAGATCTC...CTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGTTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
||
| CDS-3UTR GCA 90 bp | TTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCAGGTTCTTCTCAATCTaGTGTGGAGGCAGGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: FILGERWRCVVDANCYVTRFFSI*CGGRRL Trigger: GAGGCGCCTGCCTCCACAGCAGATTGAGAAGAACCT...GGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | CCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGAGATCTCATTCAGCGTaGTTCGGATTTTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHGLYGNVVGSRPWSQRRRSHSA*FGFCFP Trigger: TGGAAAACAAAATCCGAAGCACGCTGAATGAGATCT...CCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | TTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGCAATTTTCAGGGGCTaGTCAACAGATGACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGERWRCVVDANCYVTCQAIFRG*STDDRR Trigger: TCTCCTGTCATCTGTTGACCAGCCCCTGAAAATTGC...CTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCAAGCAACTCCCACACACACACGGATCAGATCTCCAGTTTCTTCTCTCACTCTGAGCCGAGCAGATaGCATGGCCCCATCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TPSNSHTHTDQISSFFSHSEPSR*HGPIFQ Trigger: TTGGAAGATGGGGCCATGCCATCTGCTCGGCTCAGA...GTGAGAGAAGAAACTGGAGATCTGATCCGTGTGTGTGTGGGAGTTGCTTGGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAAATGGGCAAGGGAAGGAAGGGGGACAGGCGAACAAAACCACACGGTCTTACAGGTCTCGGTATTaGTCGAAGGCATTGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PINGQGKEGGQANKTTRSYRSRY*SKALLA Trigger: GGCCAACAATGCCTTCGACCAATACCGAGACCTGTA...AGACCGTGTGGTTTTGTTCGCCTGTCCCCCTTCCTTCCCTTGCCCATTTATAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CTCCAAGCAACTCCCACACACACACGGATCAGATCTCCAGTTTCTTCTCTCACATGCACTTCCACCACGTaGATGGAATCCCAGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQATPTHTRIRSPVSSLTCTSTT*MESQQP Trigger: AGGCTGCTGGGATTCCATCCACGTGGTGGAAGTGCA...TGTGAGAGAAGAAACTGGAGATCTGATCCGTGTGTGTGTGGGAGTTGCTTGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR TCA 90 bp | CGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGAAGCGCTTCTTGCTTTaGTTTGTCTGCAAACGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGKQALEPEEGGYRTLFWKRFLL*FVCKRL Trigger: CAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTT...CCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS-3UTR TCA 90 bp | ACAAAACCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAAGCGCTTCTTGCTTTaGTTTGTCTGCAAACGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKPHGLYGNVVGSRPWSQKRFLL*FVCKRL Trigger: CAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTT...CTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | GTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGCAATTTTCAGGGGCTaGTCAACAGATGACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVGSRPWSQRRVVIGLYFAIFRG*STDDRR Trigger: TCTCCTGTCATCTGTTGACCAGCCCCTGAAAATTGC...AAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGCAATTTTCAGGGGCTaGTCAACAGATGACAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQALEPEEGGYRTLFWGRAIFRG*STDDRR Trigger: TCTCCTGTCATCTGTTGACCAGCCCCTGAAAATTGC...TCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCAAGCAACTCCCACACACACACGGATCAGATCTCCAGTTTCTTCTCTCACCCACCACCTTGTCTCTaGCAATTTTCAGGGGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TPSNSHTHTDQISSFFSHPPPCL*QFSGAG Trigger: ACCAGCCCCTGAAAATTGCCAGAGACAAGGTGGTGG...GTGAGAGAAGAAACTGGAGATCTGATCCGTGTGTGTGTGGGAGTTGCTTGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | AACGAGTTTTCTAAAGAAAGGAACCTAACGAGTGCATGGCGTGTCCGGTTAGCGTTGTCTGCAAACGTCTaGACAGACCTCAGCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NEFSKERNLTSAWRVRLALSANV*TDLSPL Trigger: CAACGGGCTGAGGTCTGTGCAGACGTTTGCAGACAA...CGCTAACCGGACACGCCATGCACTCGTTAGGTTCCTTTCTTTAGAAAACTCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | GGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTTTCTTAAGCGCTTCTTaGTTTGATTTGTCTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLYGNVVGSRPWSQRRVVFLSAS*FDLSAN Trigger: GTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAA...AACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACGCCATAGCATCACCGTaGAGGTCAACTTGTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYFGGEMALRGRCKLLCDAIASP*RSTCNG Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTATGGC...GTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGAGATCTCATTCAGCGTaGTTCGGATTTTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLGARGGWLSDFILGERWRSHSA*FGFCFP Trigger: TGGAAAACAAAATCCGAAGCACGCTGAATGAGATCT...CCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | GCAGAAAACGAGTTTTCTAAAGAAAGGAACCTAACGAGTGCATGGCGTGTCCGGCCGAGCCGGATTTGTTaGTTTGCAGCCATAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: AENEFSKERNLTSAWRVRPSRIC*FAAIAS Trigger: TGATGCTATGGCTGCAAACCAACAAATCCGGCTCGG...CCGGACACGCCATGCACTCGTTAGGTTCCTTTCTTTAGAAAACTCGTTTTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGCAAGGGATGTTGGCTATGTGTaGGGAACAGTCACTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KDGGSGVRQCICAYKWARDVGYV*GTVTHS Trigger: ACTGTGAGTGACTGTTCCCCACACATAGCCAACATC...CCTTGCCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTAGATCTCATTCAGCGTaGTTCGGATTTTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEPEEGGYRTLFWGRDGARSHSA*FGFCFP Trigger: TGGAAAACAAAATCCGAAGCACGCTGAATGAGATCT...AGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | CTCCAAGCAACTCCCACACACACACGGATCAGATCTCCAGTTTCTTCTCTCACAAGTTCCCTCTGCAACTaGTTAAACTTGTGGTTGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQATPTHTRIRSPVSSLTSSLCN*LNLWLS Trigger: CGACAACCACAAGTTTAAGCAGTTGCAGAGGGAACT...TGTGAGAGAAGAAACTGGAGATCTGATCCGTGTGTGTGTGGGAGTTGCTTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
||
| CDS-3UTR TCA 90 bp | GCAGAAAACGAGTTTTCTAAAGAAAGGAACCTAACGAGTGCATGGCGTGTCCGGAAGCGCTTCTTGCTTTaGTTTGTCTGCAAACGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AENEFSKERNLTSAWRVRKRFLL*FVCKRL Trigger: CAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTT...CCGGACACGCCATGCACTCGTTAGGTTCCTTTCTTTAGAAAACTCGTTTTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | ATAAATGGGCAAGGGAAGGAAGGGGGACAGGCGAACAAAACCACACGGTCTCTAAGATCTCATTCAGCGTaGTTCGGATTTTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: INGQGKEGGQANKTTRSLRSHSA*FGFCFP Trigger: TGGAAAACAAAATCCGAAGCACGCTGAATGAGATCT...TAGAGACCGTGTGGTTTTGTTCGCCTGTCCCCCTTCCTTCCCTTGCCCATTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | AACAAAAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGGATGTTGGCTATGTGTaGGGAACAGTCACTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKKMEGAVSDSVSVPINGDVGYV*GTVTHS Trigger: ACTGTGAGTGACTGTTCCCCACACATAGCCAACATC...CCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR GCA 90 bp | CTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACTTCTTAAGCGCTTCTTaGTTTGATTTGTCTGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LYFGGEMALRGRCKLLCDFLSAS*FDLSAN Trigger: GTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAA...GTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS-3UTR CCA 90 bp | CAATGTAACAAAAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAACTGCTTAAACTTGTaGTTGTCGGGGATAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QCNKKMEGAVSDSVSVPINCLNL*LSGIAS Trigger: TGATGCTATCCCCGACAACCACAAGTTTAAGCAGTT...TATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTTTTGTTACATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
||
| CDS CCA 90 bp | GGGGACCAGGTCGATCAGATCGCTGAGGTTCTTCTCAATCTGCTGTaGAGGCAGGCGCCTCATCAGGTCCAAGGCGCAGTCCAGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDQVDQIAEVLLNLL*RQAPHQVQGAVQLL Trigger: CAGCAGCTGGACTGCGCCTTGGACCTGATGAGGCGCCTGCCTCCACAGCAGATTGAGAAGAACCTCAGCGATCTGATCGACCTGGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000131912.8 ENSMUST00000145368.8 |
||
| CDS-3UTR CAA 90 bp | CACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGACCAGGCGCCCGATGTaGGCTATGTGTGGGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: HTVSMETSWEAGLGARGGTRRPM*AMCGEQ Trigger: CTGTTCCCCACACATAGCCAACATCGGGCGCCTGGT...CCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS GCA 90 bp | AGACTGGGGACCAGGTCGATCAGATCGCTGAGGTTCTTCTCAATCTaGTGTGGAGGCAGGCGCCTCATCAGGTCCAAGGCGCAGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLGTRSIRSLRFFSI*CGGRRLIRSKAQSS Trigger: GCTGGACTGCGCCTTGGACCTGATGAGGCGCCTGCCTCCACAGCAGATTGAGAAGAACCTCAGCGATCTGATCGACCTGGTCCCCAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000131912.8 ENSMUST00000145368.8 |
||
| CDS GCA 90 bp | CGTCTTTCTCCATCTGTCTGGTTAGGCTGCCTCCCAGGTTCATGGTaGCCGAGCCGGATTTGTTGGTTTGCAGCCATAGCATCACCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLSPSVWLGCLPGSW*PSRICWFAAIASPW Trigger: CCACGGTGATGCTATGGCTGCAAACCAACAAATCCGGCTCGGGCACCATGAACCTGGGAGGCAGCCTAACCAGACAGATGGAGAAAGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
||
| CDS CCA 90 bp | TGGTGCCCGAGCCGGATTTGTTGGTTTGCAGCCATAGCATCACCGTaGAGGTCAACTTGTAATGGGCAGTACGGCCGCTGGACTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WCPSRICWFAAIASP*RSTCNGQYGRWTSP Trigger: AGGAGAAGTCCAGCGGCCGTACTGCCCATTACAAGTTGACCTCCACGGTGATGCTATGGCTGCAAACCAACAAATCCGGCTCGGGCACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
||
| CDS-3UTR CAA 90 bp | CACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGATACAGGTCTCGGTATaGGTCGAAGGCATTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: HTVSMETSWEAGLGARGGIQVSV*VEGIVG Trigger: GCCAACAATGCCTTCGACCAATACCGAGACCTGTAT...CCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | ACCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGTGGAATCCCAGCAGCCTTaGATCTTCTTGGATCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TPPQHGLLGTRVHLCRTVESQQP*IFLDPS Trigger: AGATGGATCCAAGAAGATCAAAGGCTGCTGGGATTC...CACTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | CCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGCCCGAGCCGGATTTGTaGGTTTGCAGCCATAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PEEGGYRTLFWGRDGAAWPEPDL*VCSHSI Trigger: GATGCTATGGCTGCAAACCAACAAATCCGGCTCGGG...CCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | CCACCCCACCCCAGCATGGTCTCCTTGGGACAAGGGTCCACCTGTGCAGGACAGGCTTCTTGCTTTGATTaGTCTGCAAACGTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PPHPSMVSLGQGSTCAGQASCFD*SANVCT Trigger: TGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGC...CTGTCCTGCACAGGTGGACCCTTGTCCCAAGGAGACCATGCTGGGGTGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042675.9 ENSMUST00000102508.10 |
||
| CDS TCA 90 bp | CTCGGTATTGGTCGAAGGCATTGTTGGCCTCTACCTCCAGCTTTCTaGGCCGAGCAGATGGCATGGCCCCATCTTCCAAAGGAGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LGIGRRHCWPLPPAF*AEQMAWPHLPKEGH Trigger: ATGACCCTCCTTTGGAAGATGGGGCCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000131912.8 ENSMUST00000138045.8 ENSMUST00000145368.8 |
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| CDS CCA 90 bp | TGGTTAGGCTGCCTCCCAGGTTCATGGTGCCCGAGCCGGATTTGTTaGTTTGCAGCCATAGCATCACCGTGGAGGTCAACTTGTAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: WLGCLPGSWCPSRIC*FAAIASPWRSTCNG Trigger: CCCATTACAAGTTGACCTCCACGGTGATGCTATGGCTGCAAACCAACAAATCCGGCTCGGGCACCATGAACCTGGGAGGCAGCCTAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
||
| CDS-3UTR CAA 90 bp | CTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGATACAGGTCTCGGTATaGGTCGAAGGCATTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LWKRRGKQALEPEEGGYRIQVSV*VEGIVG Trigger: GCCAACAATGCCTTCGACCAATACCGAGACCTGTAT...CCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | ACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTCCCGAGCCGGATTTGTaGGTTTGCAGCCATAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TSWEAGLGARGGWLSDFIPEPDL*VCSHSI Trigger: GATGCTATGGCTGCAAACCAACAAATCCGGCTCGGG...AATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | ACAAAACCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGCCCGAGCCGGATTTGTaGGTTTGCAGCCATAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TKPHGLYGNVVGSRPWSQPEPDL*VCSHSI Trigger: GATGCTATGGCTGCAAACCAACAAATCCGGCTCGGG...CTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGTTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS CCA 90 bp | TTTCGTCTTTCTCCATCTGTCTGGTTAGGCTGCCTCCCAGGTTCATaGTGCCCGAGCCGGATTTGTTGGTTTGCAGCCATAGCATCACCG | + |
|
Preference number: 5 (lower is better) Translates to: FRLSPSVWLGCLPGS*CPSRICWFAAIASP Trigger: CGGTGATGCTATGGCTGCAAACCAACAAATCCGGCTCGGGCACCATGAACCTGGGAGGCAGCCTAACCAGACAGATGGAGAAAGACGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
||
| CDS-3UTR CAA 90 bp | CCTGTCCCCAGCCCTGACTCCAAGCAACTCCCACACACACACGGATCAGATCTCAAAGGAGGGTCATACTaGTTACTCCACGGTGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: PVPSPDSKQLPHTHGSDLKGGSY*LLHGDL Trigger: TAGGTCACCGTGGAGTAACAAGTATGACCCTCCTTT...GAGATCTGATCCGTGTGTGTGTGGGAGTTGCTTGGAGTCAGGGCTGGGGACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | CTGTCCCCAGCCCTGACTCCAAGCAACTCCCACACACACACGGATCAGATCTCCCAGCCTTTGATCTTCTaGGATCCATCTCCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPALTPSNSHTHTDQISQPLIF*DPSPAF Trigger: GAAAGCTGGAGATGGATCCAAGAAGATCAAAGGCTG...GGAGATCTGATCCGTGTGTGTGTGGGAGTTGCTTGGAGTCAGGGCTGGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | CTGTCCCCAGCCCTGACTCCAAGCAACTCCCACACACACACGGATCAGATCTCCGAATCCCAGCAGCCTTaGATCTTCTTGGATCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LSPALTPSNSHTHTDQISESQQP*IFLDPS Trigger: AGATGGATCCAAGAAGATCAAAGGCTGCTGGGATTC...GGAGATCTGATCCGTGTGTGTGTGGGAGTTGCTTGGAGTCAGGGCTGGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | CTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACACCAGGCGCCCGATGTaGGCTATGTGTGGGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LYFGGEMALRGRCKLLCDTRRPM*AMCGEQ Trigger: CTGTTCCCCACACATAGCCAACATCGGGCGCCTGGT...GTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | TGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAAGGAAGCGTGCTTCGGATTTaGTTTTCCATGTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: WRCVVDANCYVTCQGGKGSVLRI*FSMSST Trigger: GGTGGAGGACATGGAAAACAAAATCCGAAGCACGCT...TCCTTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | TATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGAAAAGGAGGGTCATACTaGTTACTCCACGGTGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: YGNVVGSRPWSQRRVVIGKGGSY*LLHGDL Trigger: TAGGTCACCGTGGAGTAACAAGTATGACCCTCCTTT...TCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | GGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAATACAGGTCTCGGTATaGGTCGAAGGCATTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRPWSQRRVVIGLYFGGIQVSV*VEGIVG Trigger: GCCAACAATGCCTTCGACCAATACCGAGACCTGTAT...TCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | TGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAAGGACAGCCTTTGATCTTCTaGGATCCATCTCCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WRCVVDANCYVTCQGGKGQPLIF*DPSPAF Trigger: GAAAGCTGGAGATGGATCCAAGAAGATCAAAGGCTG...TCCTTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | AAACCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGCAGCCTTTGATCTTCTaGGATCCATCTCCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KPHGLYGNVVGSRPWSQRQPLIF*DPSPAF Trigger: GAAAGCTGGAGATGGATCCAAGAAGATCAAAGGCTG...CCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | ACAAAACCACACGGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGCGTGCTTCGGATTTaGTTTTCCATGTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TKPHGLYGNVVGSRPWSQSVLRI*FSMSST Trigger: GGTGGAGGACATGGAAAACAAAATCCGAAGCACGCT...CTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACCGTGTGGTTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | CGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGAGCGTGCTTCGGATTTaGTTTTCCATGTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGKQALEPEEGGYRTLFWSVLRI*FSMSST Trigger: GGTGGAGGACATGGAAAACAAAATCCGAAGCACGCT...CCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | GGTCTCTATGGAAACGTCGTGGGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTAGAGATCTCAGCCCGTaGACGATGTCCTTTGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLYGNVVGSRPWSQRRVVRDLSP*TMSFVF Trigger: AAAAACAAAGGACATCGTCAACGGGCTGAGATCTCT...AACCACCCTCCTCTGGCTCCAAGGCCTGCTTCCCACGACGTTTCCATAGAGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| CDS-3UTR CAA 90 bp | GGAAGCAGGCCTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAAAAGGAGGGTCATACTaGTTACTCCACGGTGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: GSRPWSQRRVVIGLYFGGKGGSY*LLHGDL Trigger: TAGGTCACCGTGGAGTAACAAGTATGACCCTCCTTT...TCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAGGCCTGCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | CCTATAAATGGGCAAGGGAAGGAAGGGGGACAGGCGAACAAAACCACACGGTCTATACAGGTCTCGGTATaGGTCGAAGGCATTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PINGQGKEGGQANKTTRSIQVSV*VEGIVG Trigger: GCCAACAATGCCTTCGACCAATACCGAGACCTGTAT...AGACCGTGTGGTTTTGTTCGCCTGTCCCCCTTCCTTCCCTTGCCCATTTATAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | CTTGGAGCCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCGAATCCCAGCAGCCTTaGATCTTCTTGGATCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LGARGGWLSDFILGERWRESQQP*IFLDPS Trigger: AGATGGATCCAAGAAGATCAAAGGCTGCTGGGATTC...GCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGGCTCCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | AAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGCAAGGCCCGAGCCGGATTTGTaGGTTTGCAGCCATAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: KDGGSGVRQCICAYKWARPEPDL*VCSHSI Trigger: GATGCTATGGCTGCAAACCAACAAATCCGGCTCGGG...CCTTGCCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | ATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACCTGTCAGGGCGGGAAAGGGCTTCTTGCTTTGATTaGTCTGCAAACGTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: MALRGRCKLLCDLSGRERASCFD*SANVCT Trigger: TGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGC...CCTTTCCCGCCCTGACAGGTCACATAACAGTTTGCATCGACCACGCAGCGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | CCAGAGGAGGGTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGGCTTCTTGCTTTGATTaGTCTGCAAACGTCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PEEGGYRTLFWGRDGAAWASCFD*SANVCT Trigger: TGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGC...CCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCACCCTCCTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS TCA 90 bp | TCTCTTCAAGGCCTCCACCAGGTCGTTCTTAAGCGCTTCTTGCTTTaGTTTGTCTGCAAACGTCTGCACAGACCTCAGCCCGTTGACGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLQGLHQVVLKRFLL*FVCKRLHRPQPVDD Trigger: ATCGTCAACGGGCTGAGGTCTGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAACGACCTGGTGGAGGCCTTGAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS GCA 90 bp | TGCTTTCTCTTCAAGGCCTCCACCAGGTCGTTCTTAAGCGCTTCTTaGTTTGATTTGTCTGCAAACGTCTGCACAGACCTCAGCCCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CFLFKASTRSFLSAS*FDLSANVCTDLSPL Trigger: CAACGGGCTGAGGTCTGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAACGACCTGGTGGAGGCCTTGAAGAGAAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS GCA 90 bp | GGAAGGCTGTCTGACAAGCCTGTGGACATCACAACACATTCAGAGTaGCTTGCTATAGAATCTAACAGAAGACGGGCTCTGTGTGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRLSDKPVDITTHSE*LAIESNRRRALCGA Trigger: TGCCCCACACAGAGCCCGTCTTCTGTTAGATTCTATAGCAAGGCACTCTGAATGTGTTGTGATGTCCACAGGCTTGTCAGACAGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131912.8 |
||
| CDS CCA 90 bp | TTTGTTTTCCATGTCCTCCACCAGGCGCCCGATGTTGGCTATGTGTaGGGAACAGTCACTCACAGTTTCGTCTTTCTCCATCTGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FVFHVLHQAPDVGYV*GTVTHSFVFLHLSG Trigger: ACCAGACAGATGGAGAAAGACGAAACTGTGAGTGACTGTTCCCCACACATAGCCAACATCGGGCGCCTGGTGGAGGACATGGAAAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS CCA 90 bp | TCAGGTTCAGTCAACACCAGAAAGCCTACAGATAGGTCTCGGTATTaGTCGAAGGCATTGTTGGCCTCTACCTCCAGCTTTCTGAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: SGSVNTRKPTDRSRY*SKALLASTSSFLSR Trigger: TCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTATCTGTAGGCTTTCTGGTGTTGACTGAACCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131912.8 |
||
| CDS-3UTR CAA 90 bp | AAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGCAAGGTGGTCGAAGGCATTGTaGGCCTCTACCTCCAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KDGGSGVRQCICAYKWARWSKAL*ASTSSF Trigger: AAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCA...CCTTGCCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | CAATGTAACAAAAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAACCAGGCGCCCGATGTaGGCTATGTGTGGGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: QCNKKMEGAVSDSVSVPITRRPM*AMCGEQ Trigger: CTGTTCCCCACACATAGCCAACATCGGGCGCCTGGT...TATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTTTTGTTACATTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | GGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTAAAGGAGGGTCATACTaGTTACTCCACGGTGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: GYRTLFWGRDGAAWSMQTKGGSY*LLHGDL Trigger: TAGGTCACCGTGGAGTAACAAGTATGACCCTCCTTT...AGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | GTGGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACAGCCTTTGATCTTCTaGGATCCATCTCCAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVIGLYFGGEMALRGRCKQPLIF*DPSPAF Trigger: GAAAGCTGGAGATGGATCCAAGAAGATCAAAGGCTG...TTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | ACTCCAAGCAACTCCCACACACACACGGATCAGATCTCCAGTTTCTTCTCTCACAGCGTGCTTCGGATTTaGTTTTCCATGTCCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TPSNSHTHTDQISSFFSHSVLRI*FSMSST Trigger: GGTGGAGGACATGGAAAACAAAATCCGAAGCACGCT...GTGAGAGAAGAAACTGGAGATCTGATCCGTGTGTGTGTGGGAGTTGCTTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
||
| CDS-3UTR CAA 90 bp | GGTTATCGGACTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTTGCAACTGCTTAAACTaGTGGTTGTCGGGGATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GYRTLFWGRDGAAWSMQTCNCLN*WLSGIA Trigger: TGCTATCCCCGACAACCACAAGTTTAAGCAGTTGCA...AGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAGTCCGATAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| CDS-3UTR CAA 90 bp | CTTTATTTTGGGGGAGAGATGGCGCTGCGTGGTCGATGCAAACTGTTATGTGACACAGACCTCAGCCCGTaGACGATGTCCTTTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: LYFGGEMALRGRCKLLCDTDLSP*TMSFVF Trigger: AAAAACAAAGGACATCGTCAACGGGCTGAGGTCTGT...GTCACATAACAGTTTGCATCGACCACGCAGCGCCATCTCTCCCCCAAAATAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | AACGAGTTTTCTAAAGAAAGGAACCTAACGAGTGCATGGCGTGTCCGGTTAGCGACAGACCTCAGCCCGTaGACGATGTCCTTTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: NEFSKERNLTSAWRVRLATDLSP*TMSFVF Trigger: AAAAACAAAGGACATCGTCAACGGGCTGAGGTCTGT...CGCTAACCGGACACGCCATGCACTCGTTAGGTTCCTTTCTTTAGAAAACTCGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | AACAAAAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGGAATCCCAGCAGCCTTaGATCTTCTTGGATCCATCT | + |
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Preference number: 5 (lower is better) Translates to: NKKMEGAVSDSVSVPINGESQQP*IFLDPS Trigger: AGATGGATCCAAGAAGATCAAAGGCTGCTGGGATTC...CCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTTTTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | CAATGTAACAAAAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAACAGACCTCAGCCCGTaGACGATGTCCTTTGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: QCNKKMEGAVSDSVSVPITDLSP*TMSFVF Trigger: AAAAACAAAGGACATCGTCAACGGGCTGAGGTCTGT...TATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTTTTGTTACATTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS-3UTR CAA 90 bp | AACAAAAAGATGGAGGGAGCGGTGTCAGACAGTGTATCTGTGCCTATAAATGGGTGCTTAAACTTGTGGTaGTCGGGGATAGCATCAAGA | + |
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Preference number: 5 (lower is better) Translates to: NKKMEGAVSDSVSVPINGCLNLW*SGIASR Trigger: TCTTGATGCTATCCCCGACAACCACAAGTTTAAGCA...CCCATTTATAGGCACAGATACACTGTCTGACACCGCTCCCTCCATCTTTTTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102507.10 |
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| CDS GCA 72 bp | ACCAGGTCGATCAGATCGCTGAGGTTCTTCTCAATCTaGTGTGGAGGCAGGCGCCTCATCAGGTCCAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: TRSIRSLRFFSI*CGGRRLIRSKA Trigger: CGCCTTGGACCTGATGAGGCGCCTGCCTCCACAGCAGATTGAGAAGAACCTCAGCGATCTGATCGACCTGGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000131912.8 ENSMUST00000145368.8 |
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| CDS CCA 72 bp | GTCGATCAGATCGCTGAGGTTCTTCTCAATCTGCTGTaGAGGCAGGCGCCTCATCAGGTCCAAGGCGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: VDQIAEVLLNLL*RQAPHQVQGAV Trigger: GACTGCGCCTTGGACCTGATGAGGCGCCTGCCTCCACAGCAGATTGAGAAGAACCTCAGCGATCTGATCGAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000131912.8 ENSMUST00000145368.8 |
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| CDS TCA 72 bp | GGTCGAAGGCATTGTTGGCCTCTACCTCCAGCTTTCTaGGCCGAGCAGATGGCATGGCCCCATCTTCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GRRHCWPLPPAF*AEQMAWPHLPK Trigger: CTTTGGAAGATGGGGCCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000131912.8 ENSMUST00000138045.8 ENSMUST00000145368.8 |
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| CDS GCA 72 bp | CCATCTGTCTGGTTAGGCTGCCTCCCAGGTTCATGGTaGCCGAGCCGGATTTGTTGGTTTGCAGCCATAGCA | + |
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Preference number: 6 (lower is better) Translates to: PSVWLGCLPGSW*PSRICWFAAIA Trigger: TGCTATGGCTGCAAACCAACAAATCCGGCTCGGGCACCATGAACCTGGGAGGCAGCCTAACCAGACAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
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| CDS CCA 72 bp | TGCCTCCCAGGTTCATGGTGCCCGAGCCGGATTTGTTaGTTTGCAGCCATAGCATCACCGTGGAGGTCAACT | + |
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Preference number: 6 (lower is better) Translates to: CLPGSWCPSRIC*FAAIASPWRST Trigger: AGTTGACCTCCACGGTGATGCTATGGCTGCAAACCAACAAATCCGGCTCGGGCACCATGAACCTGGGAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
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| CDS CCA 72 bp | GTTGGCCTCTACCTCCAGCTTTCTGAGCCGAGCAGATaGCATGGCCCCATCTTCCAAAGGAGGGTCATACTT | + |
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Preference number: 6 (lower is better) Translates to: VGLYLQLSEPSR*HGPIFQRRVIL Trigger: AAGTATGACCCTCCTTTGGAAGATGGGGCCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000131912.8 ENSMUST00000138045.8 ENSMUST00000145368.8 |
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| CDS CCA 72 bp | AGCCGGATTTGTTGGTTTGCAGCCATAGCATCACCGTaGAGGTCAACTTGTAATGGGCAGTACGGCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SRICWFAAIASP*RSTCNGQYGRW Trigger: CCAGCGGCCGTACTGCCCATTACAAGTTGACCTCCACGGTGATGCTATGGCTGCAAACCAACAAATCCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
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| CDS CAA 90 bp | ACCCCACCTTCAAAATACAGGTCTCGGTATTGGTCGAAGGCATTGTaGGCCTCTACCTCCAGCTTTCTGAGCCGAGCAGATGGCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: TPPSKYRSRYWSKAL*ASTSSFLSRADGMA Trigger: GGCCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTGTATTTTGAAGGTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
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| CDS CAA 90 bp | ACCAGAAAGCCTACAGATAGGTCTCGGTATTGGTCGAAGGCATTGTaGGCCTCTACCTCCAGCTTTCTGAGCCGAGCAGATGGCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: TRKPTDRSRYWSKAL*ASTSSFLSRADGMA Trigger: GGCCATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTATCTGTAGGCTTTCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131912.8 |
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| CDS TCA 72 bp | GGCCTCCACCAGGTCGTTCTTAAGCGCTTCTTGCTTTaGTTTGTCTGCAAACGTCTGCACAGACCTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GLHQVVLKRFLL*FVCKRLHRPQP Trigger: GGGCTGAGGTCTGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAACGACCTGGTGGAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS GCA 72 bp | TCACAGTTTCGTCTTTCTCCATCTGTCTGGTTAGGCTaGCTCCCAGGTTCATGGTGCCCGAGCCGGATTTGT | + |
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Preference number: 6 (lower is better) Translates to: SQFRLSPSVWLG*LPGSWCPSRIC Trigger: ACAAATCCGGCTCGGGCACCATGAACCTGGGAGGCAGCCTAACCAGACAGATGGAGAAAGACGAAACTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
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| CDS CCA 72 bp | CATGTCCTCCACCAGGCGCCCGATGTTGGCTATGTGTaGGGAACAGTCACTCACAGTTTCGTCTTTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: HVLHQAPDVGYV*GTVTHSFVFLH Trigger: ATGGAGAAAGACGAAACTGTGAGTGACTGTTCCCCACACATAGCCAACATCGGGCGCCTGGTGGAGGACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 |
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| CDS CAA 90 bp | GAGACCCCACCTTCAAAATACAGGTCTCGGTATTGGTCGAAGGCATaGTTGGCCTCTACCTCCAGCTTTCTGAGCCGAGCAGATGGCATG | + |
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Preference number: 6 (lower is better) Translates to: ETPPSKYRSRYWSKA*LASTSSFLSRADGM Trigger: CATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTGTATTTTGAAGGTGGGGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
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| CDS CAA 72 bp | CCTACAGATAGGTCTCGGTATTGGTCGAAGGCATTGTaGGCCTCTACCTCCAGCTTTCTGAGCCGAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: PTDRSRYWSKAL*ASTSSFLSRAD Trigger: ATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTATCTGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131912.8 |
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| CDS CAA 90 bp | AACACCAGAAAGCCTACAGATAGGTCTCGGTATTGGTCGAAGGCATaGTTGGCCTCTACCTCCAGCTTTCTGAGCCGAGCAGATGGCATG | + |
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Preference number: 6 (lower is better) Translates to: NTRKPTDRSRYWSKA*LASTSSFLSRADGM Trigger: CATGCCATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTATCTGTAGGCTTTCTGGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131912.8 |
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| CDS GCA 72 bp | TTCAAGGCCTCCACCAGGTCGTTCTTAAGCGCTTCTTaGTTTGATTTGTCTGCAAACGTCTGCACAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: FKASTRSFLSAS*FDLSANVCTDL Trigger: GAGGTCTGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTTAAGAACGACCTGGTGGAGGCCTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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| CDS CCA 72 bp | GATGAGACCCCACCTTCAAAATACAGGTCTCGGTATTaGTCGAAGGCATTGTTGGCCTCTACCTCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DETPPSKYRSRY*SKALLASTSSF Trigger: AAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTGTATTTTGAAGGTGGGGTCTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
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| CDS CCA 72 bp | GTCAACACCAGAAAGCCTACAGATAGGTCTCGGTATTaGTCGAAGGCATTGTTGGCCTCTACCTCCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: VNTRKPTDRSRY*SKALLASTSSF Trigger: AAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTATCTGTAGGCTTTCTGGTGTTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131912.8 |
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| CDS CAA 72 bp | TCAAAATACAGGTCTCGGTATTGGTCGAAGGCATTGTaGGCCTCTACCTCCAGCTTTCTGAGCCGAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SKYRSRYWSKAL*ASTSSFLSRAD Trigger: ATCTGCTCGGCTCAGAAAGCTGGAGGTAGAGGCCAACAATGCCTTCGACCAATACCGAGACCTGTATTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102507.10 ENSMUST00000102508.10 ENSMUST00000138045.8 |
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| CDS TCA 72 bp | GACCCCACCTTCAAAATACCTTTCAGGAAGGCTGTCTaGCAAGCCTGTGGACATCACAACACATTCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: DPTFKIPFRKAV*QACGHHNTFRV Trigger: CACTCTGAATGTGTTGTGATGTCCACAGGCTTGTCAGACAGCCTTCCTGAAAGGTATTTTGAAGGTGGGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131912.8 |
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| CDS GCA 72 bp | TTAAGCGCTTCTTGCTTTGATTTGTCTGCAAACGTCTaGACAGACCTCAGCCCGTTGACGATGTCCTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: LSASCFDLSANV*TDLSPLTMSFV Trigger: AACAAAGGACATCGTCAACGGGCTGAGGTCTGTGCAGACGTTTGCAGACAAATCAAAGCAAGAAGCGCTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030518.16 ENSMUST00000042675.9 ENSMUST00000102508.10 |
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