Pregenerated sensors for CAPRIN2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030309

Ensembl transcript IDs: ENSMUST00000072324.12, ENSMUST00000111569.9, ENSMUST00000127941.8, ENSMUST00000139914.2

Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	GCTCCCCTGTGTAAGCGCAGCCATATCTGGTCTCCCTGGAGGAGCTaGAGAACGGCATGGTTGCTTGCTGTCTCATGGTCTGGAGCACCA	+
Preference number: 1 (lower is better) Translates to: APLCKRSHIWSPWRS*RTAWLLAVSWSGAP Trigger: TGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATGGCTGCGCTTACACAGGGGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
3UTR GCA 90 bp	GCAGCCATATCTGGTCTCCCTGGAGGAGCTGGAGAACGGCATGGTTaGTTGCTGTCTCATGGTCTGGAGCACCATCGTTGGCATAGGCTG	+
Preference number: 1 (lower is better) Translates to: AAISGLPGGAGERHG*LLSHGLEHHRWHRL Trigger: CAGCCTATGCCAACGATGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
3UTR CAA 90 bp	GCCATATCTGGTCTCCCTGGAGGAGCTGGAGAACGGCATGGTTGCTaGCTGTCTCATGGTCTGGAGCACCATCGTTGGCATAGGCTGACA	+
Preference number: 2 (lower is better) Translates to: AISGLPGGAGERHGC*LSHGLEHHRWHRLT Trigger: TGTCAGCCTATGCCAACGATGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
3UTR-3UTR CCA 90 bp	CCCTGTGTAAGCGCAGCCATATCTGGTCTCCCTGGAGGAGCTGGAGAACGGCATCTGGAGCACCATCGTTaGCATAGGCTGACACCAAGA	+
Preference number: 2 (lower is better) Translates to: PCVSAAISGLPGGAGERHLEHHR*HRLTPR Trigger: TCTTGGTGTCAGCCTATGCCAACGATGGTGCTCCAG...ATGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATGGCTGCGCTTACACAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
3UTR-3UTR CCA 90 bp	TACTTCCATAAATCGCTCCCCTGTGTAAGCGCAGCCATATCTGGTCTCCCTGGATTGCTTGCTGTCTCATaGTCTGGAGCACCATCGTTG	+
Preference number: 2 (lower is better) Translates to: YFHKSLPCVSAAISGLPGLLAVS*SGAPSL Trigger: CAACGATGGTGCTCCAGACCATGAGACAGCAAGCAA...TCCAGGGAGACCAGATATGGCTGCGCTTACACAGGGGAGCGATTTATGGAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
3UTR-3UTR TCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAAGTTTAAATTTTTATTaGGGCACAACGAGGCATGGT	+
Preference number: 2 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSSLNFY*GTTRHG Trigger: ACCATGCCTCGTTGTGCCTCAATAAAAATTTAAACT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
3UTR GCA 72 bp	GTCTCCCTGGAGGAGCTGGAGAACGGCATGGTTGCTTaGTGTCTCATGGTCTGGAGCACCATCGTTGGCATA	+
Preference number: 3 (lower is better) Translates to: VSLEELENGMVA*CLMVWSTIVGI Trigger: TATGCCAACGATGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCTCCTCCAGGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
3UTR CCA 72 bp	CATATCTGGTCTCCCTGGAGGAGCTGGAGAACGGCATaGTTGCTTGCTGTCTCATGGTCTGGAGCACCATCG	+
Preference number: 3 (lower is better) Translates to: HIWSPWRSWRTA*LLAVSWSGAPS Trigger: CGATGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
3UTR CCA 72 bp	TGTAAGCGCAGCCATATCTGGTCTCCCTGGAGGAGCTaGAGAACGGCATGGTTGCTTGCTGTCTCATGGTCT	+
Preference number: 3 (lower is better) Translates to: CKRSHIWSPWRS*RTAWLLAVSWS Trigger: AGACCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATGGCTGCGCTTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
3UTR CAA 72 bp	GGTCTCCCTGGAGGAGCTGGAGAACGGCATGGTTGCTaGCTGTCTCATGGTCTGGAGCACCATCGTTGGCAT	+
Preference number: 4 (lower is better) Translates to: GLPGGAGERHGC*LSHGLEHHRWH Trigger: ATGCCAACGATGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCTCCTCCAGGGAGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
CDS-3UTR CCA 90 bp	CGGCATGGTTGCTTGCTGTCTCATGGTCTGGAGCACCATCGTTGGCATAGGCTGGCTGGGAGCTGGCATTaGGATACTGTCTGTGTACTT	+
Preference number: 4 (lower is better) Translates to: RHGCLLSHGLEHHRWHRLAGSWH*DTVCVL Trigger: AAGTACACAGACAGTATCCCAATGCCAGCTCCCAGC...CAGCCTATGCCAACGATGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
CDS-3UTR TCA 90 bp	CCCTGTGTAAGCGCAGCCATATCTGGTCTCCCTGGAGGAGCTGGAGAACGGCATACCACTAGATGTCCCTaGTCTTTTATAACACTGCTG	+
Preference number: 4 (lower is better) Translates to: PCVSAAISGLPGGAGERHTTRCP*SFITLL Trigger: CAGCAGTGTTATAAAAGATCAGGGACATCTAGTGGT...ATGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATGGCTGCGCTTACACAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
CDS-3UTR TCA 90 bp	GGAGAACGGCATGGTTGCTTGCTGTCTCATGGTCTGGAGCACCATCGTTGGCATCTACTGATAAATGGCTaGGCAGGTCTGGGAAACATA	+
Preference number: 4 (lower is better) Translates to: GERHGCLLSHGLEHHRWHLLING*AGLGNI Trigger: TATGTTTCCCAGACCTGCTCAGCCATTTATCAGTAG...ATGCCAACGATGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCGTTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
CDS-3UTR TCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTTCTGGGCTGCTCACCTaGGAGGAGTCACTCCACCCT	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTSGLLT*EESLHP Trigger: AGGGTGGAGTGACTCCTCTCAGGTGAGCAGCCCAGA...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTTGGCAGGATGGCGGCTaGTGGGCTTGTCACTGGCAC	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIWQDGG*WACHWH Trigger: GTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCA...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTGAAGAGTCTATAGGCTaGGGCAGGGGCTTAGGCACC	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTEESIG*GRGLGT Trigger: GGTGCCTAAGCCCCTGCCTCAGCCTATAGACTCTTC...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072324.12
CDS-3UTR GCA 90 bp	TACTTCCATAAATCGCTCCCCTGTGTAAGCGCAGCCATATCTGGTCTCCCTGGAAAACATACTCGTGGGTaGTGGGTAAAAGGCAAGGCT	+
Preference number: 4 (lower is better) Translates to: YFHKSLPCVSAAISGLPGKHTRG*WVKGKA Trigger: AGCCTTGCCTTTTACCCAGCACCCACGAGTATGTTT...TCCAGGGAGACCAGATATGGCTGCGCTTACACAGGGGAGCGATTTATGGAAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
CDS-3UTR GCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTCTGAAGCCTGTTCTCTaGACACAGGGGTGGTCCAGG	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTLKPVL*TQGWSR Trigger: CCTGGACCACCCCTGTGTGCAGAGAACAGGCTTCAG...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTTATGGACTGGCAGGATaGCGGCTGCTGGGCTTGTCA	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTYGLAG*RLLGLS Trigger: TGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATA...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCACCTGCACCAGTCTCTaGAGGCTGAGTTGTCTGGTC	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSTCTSL*RLSCLV Trigger: GACCAGACAACTCAGCCTCCAGAGACTGGTGCAGGT...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCACTGGCACATCCACTaGGGTCATGCTCCGAGAGTC	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIHWHIH*GHAPRV Trigger: GACTCTCGGAGCATGACCCCAGTGGATGTGCCAGTG...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCTGCTGGGCTTGTCACTaGCACATCCACTGGGGTCAT	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSCWACH*HIHWGH Trigger: ATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCA...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACAGGATGGCGGCTGCTaGGCTTGTCACTGGCACATC	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLQDGGC*ACHWHI Trigger: GATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTGGGATAGATATGGACTaGCAGGATGGCGGCTGCTGG	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIGIDMD*QDGGCW Trigger: CCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCC...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTCATATCTGGTCTCCCTaGAGGAGCTGGAGAACGGCA	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTHIWSP*RSWRTA Trigger: TGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATG...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCCATATCTGGTCTCCCTaGAGGAGCTGGAGAACGGCA	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSHIWSP*RSWRTA Trigger: TGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATG...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCTGTGCTAATGGCTTCTaGACTCCCACTTGCAGGAGG	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSCANGF*TPTCRR Trigger: CCTCCTGCAAGTGGGAGTTCAGAAGCCATTAGCACA...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTTCTGGGCTGCTCACCTaGGAGGAGTCACTCCACCCT	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSSGLLT*EESLHP Trigger: AGGGTGGAGTGACTCCTCTCAGGTGAGCAGCCCAGA...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCGGATGTTCTGGCAGCTaGGAAGGCAACTCGCATTTG	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSGCSGS*EGNSHL Trigger: CAAATGCGAGTTGCCTTCTCAGCTGCCAGAACATCC...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTGGATGTTCTGGCAGCTaGGAAGGCAACTCGCATTTG	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTGCSGS*EGNSHL Trigger: CAAATGCGAGTTGCCTTCTCAGCTGCCAGAACATCC...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTAAGCTGGCTTTGGCTTaGAGGGGGAGACCACCATCT	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIKLALA*RGRPPS Trigger: AGATGGTGGTCTCCCCCTGCAAGCCAAAGCCAGCTT...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGTGGCAGGATGGCGGCTaGTGGGCTTGTCACTGGCAC	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVWQDGG*WACHWH Trigger: GTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCA...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTCAGGATGGCGGCTGCTaGGCTTGTCACTGGCACATC	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSQDGGC*ACHWHI Trigger: GATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTG...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATATGGACTGGCAGGATaGCGGCTGCTGGGCTTGTCA	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLYGLAG*RLLGLS Trigger: TGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATA...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCCTGGAGCACCATCGTTaGCATAGGCTGACACCAAGA	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSLEHHR*HRLTPR Trigger: TCTTGGTGTCAGCCTATGCCAACGATGGTGCTCCAG...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAAGTCCCAGGCTGCACTaGAGCCTGTTCTCTGCACAC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSSPRLH*SLFSAH Trigger: GTGTGCAGAGAACAGGCTTCAGTGCAGCCTGGGACT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCCTCTGGGCCTTTTTCTaGGCTTTCAGCAGATCTTGG	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSLWAFF*AFSRSW Trigger: CCAAGATCTGCTGAAAGCGCAGAAAAAGGCCCAGAG...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTCTCTGGGCCTTTTTCTaGGCTTTCAGCAGATCTTGG	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTLWAFF*AFSRSW Trigger: CCAAGATCTGCTGAAAGCGCAGAAAAAGGCCCAGAG...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCATCAGGATGATAACCTaGACCAGTCTCTGGAGGCTG	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSIRMIT*TSLWRL Trigger: CAGCCTCCAGAGACTGGTGCAGGTTATCATCCTGAT...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR GCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTTGTCTCTTTCTGGGCTaGTCACCTGAGAGGAGTCAC	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFICLFLG*SPERSH Trigger: GTGACTCCTCTCAGGTGAGCAGCCCAGAAAGAGACA...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAACTCTGCACAGATACTaGCCAGGATCCAGGAGGCAG	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLTLHRY*PGSRRQ Trigger: CTGCCTCCTGGATCCTGGGCAGTATCTGTGCAGAGT...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACATACTCGTGGGTGCTaGGTAAAAGGCAAGGCTGCC	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLHTRGC*VKGKAA Trigger: GGCAGCCTTGCCTTTTACCCAGCACCCACGAGTATG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCACACTGGCACATCCACTaGGGTCATGCTCCGAGAGTC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSHWHIH*GHAPRV Trigger: GACTCTCGGAGCATGACCCCAGTGGATGTGCCAGTG...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTGGGATAGATATGGACTaGCAGGATGGCGGCTGCTGG	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSGIDMD*QDGGCW Trigger: CCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCC...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAAAGCGCAGCCATATCTaGTCTCCCTGGAGGAGCTGG	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSKRSHI*SPWRSW Trigger: CCAGCTCCTCCAGGGAGACCAGATATGGCTGCGCTT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTC	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTPKVQG*LLHLVF Trigger: GAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGG...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCCACCAAGCAAGCATTTaGGCTACAAGTAACCGGAGA	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSHQASI*ATSNRR Trigger: TCTCCGGTTACTTGTAGCTCAAATGCTTGCTTGGTG...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTCTTTCTGGCTTCCACTaGCTGACAGGTGTTATAGGA	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTLSGFH*LTGVIG Trigger: TCCTATAACACCTGTCAGTCAGTGGAAGCCAGAAAG...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTAAGCTGGCTTTGGCTTaGAGGGGGAGACCACCATCT	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSKLALA*RGRPPS Trigger: AGATGGTGGTCTCCCCCTGCAAGCCAAAGCCAGCTT...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTATCAGGATGATAACCTaGACCAGTCTCTGGAGGCTG	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIIRMIT*TSLWRL Trigger: CAGCCTCCAGAGACTGGTGCAGGTTATCATCCTGAT...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR GCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAAACATACTCGTGGGTaGTGGGTAAAAGGCAAGGCT	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTKHTRG*WVKGKA Trigger: AGCCTTGCCTTTTACCCAGCACCCACGAGTATGTTT...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAACCTGCACCAGTCTCTaGAGGCTGAGTTGTCTGGTC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSTCTSL*RLSCLV Trigger: GACCAGACAACTCAGCCTCCAGAGACTGGTGCAGGT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAAGCTGGAGAACGGCATaGTTGCTTGCTGTCTCATGG	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLSWRTA*LLAVSW Trigger: CCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCT...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGAAGCGCAGCCATATCTaGTCTCCCTGGAGGAGCTGG	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVKRSHI*SPWRSW Trigger: CCAGCTCCTCCAGGGAGACCAGATATGGCTGCGCTT...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACATCTCAGGGGTCTCTaGGGTCGTAAACTCTGTTTC	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLHLRGL*GRKLCF Trigger: GAAACAGAGTTTACGACCTCAGAGACCCCTGAGATG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAACTGTCTGCATGGCCTaGAAAGGTGCTGTGCTAATG	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLTVCMA*KGAVLM Trigger: CATTAGCACAGCACCTTTTCAGGCCATGCAGACAGT...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCTTGAATCTACCAAGCTaGAGATCAAAGGTCTCTCCC	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSLNLPS*RSKVSP Trigger: GGGAGAGACCTTTGATCTTCAGCTTGGTAGATTCAA...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCGGCTTTGATACCTCCTaGGTCTTAAGAGAAGACTTC	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSGFDTS*VLREDF Trigger: GAAGTCTTCTCTTAAGACTCAGGAGGTATCAAAGCC...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGGAAGAGTCTATAGGCTaGGGCAGGGGCTTAGGCACA	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVEESIG*GRGLGT Trigger: TGTGCCTAAGCCCCTGCCTCAGCCTATAGACTCTTC...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTATTTGGAGAAGCAAGTaGAGAAGCTGGCTTTGGCTT	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTIWRSK*RSWLWL Trigger: AAGCCAAAGCCAGCTTCTGCACTTGCTTCTCCAAAT...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAATCAGGATGATAACCTaGACCAGTCTCTGGAGGCTG	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLIRMIT*TSLWRL Trigger: CAGCCTCCAGAGACTGGTGCAGGTTATCATCCTGAT...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR GCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATGTCTCTTTCTGGGCTaGTCACCTGAGAGGAGTCAC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSCLFLG*SPERSH Trigger: GTGACTCCTCTCAGGTGAGCAGCCCAGAAAGAGACA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTGTTATAGGAACCTGCTaGTTCTGCTCTTCCTGCAAT	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTVIGTC*FCSSCN Trigger: ATTGCAGGAAGAGCAGAAGCAGCAGGTTCCTATAAC...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACCACTCTGTTCACTCTaGACAGATACTGCCCAGGAT	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLPLCSL*TDTAQD Trigger: ATCCTGGGCAGTATCTGTGCAGAGTGAACAGAGTGG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTTGCTTCCAACTGGTCTaGGTTAAGCTGCTCTCCATT	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFICFQLV*VKLLSI Trigger: AATGGAGAGCAGCTTAACCCAGACCAGTTGGAAGCA...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTTCTACTGCTTCCAACTaGTCTGGGTTAAGCTGCTCT	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFISTASN*SGLSCS Trigger: AGAGCAGCTTAACCCAGACCAGTTGGAAGCAGTAGA...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTTTCTTGTTCTTTCCGTaGAGGCAGAGGTGCATTAAC	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTFLFFP*RQRCIN Trigger: GTTAATGCACCTCTGCCTCCACGGAAAGAACAAGAA...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAGCTGGGAGCTGGCATTaGGATACTGTCTGTGTACTT	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLAGSWH*DTVCVL Trigger: AAGTACACAGACAGTATCCCAATGCCAGCTCCCAGC...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGCATACTCGTGGGTGCTaGGTAAAAGGCAAGGCTGCC	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVHTRGC*VKGKAA Trigger: GGCAGCCTTGCCTTTTACCCAGCACCCACGAGTATG...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCACTGGAGCACCATCGTTaGCATAGGCTGACACCAAGA	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSLEHHR*HRLTPR Trigger: TCTTGGTGTCAGCCTATGCCAACGATGGTGCTCCAG...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTGCTTGCTGTCTCATaGTCTGGAGCACCATCGTTG	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLLLAVS*SGAPSL Trigger: CAACGATGGTGCTCCAGACCATGAGACAGCAAGCAA...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTCTCCTGACCATCTaGCTCTGGAAGTGTATTCCA	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFILLLTI*LWKCIP Trigger: TGGAATACACTTCCAGAGCCAGATGGTCAGGAGAAG...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAGGACTTAGGGCTTTCTaGCTTCCACTGACTGACAGG	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSGLRAF*LPLTDR Trigger: CCTGTCAGTCAGTGGAAGCCAGAAAGCCCTAAGTCC...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCGCAGAAAAAGTTTTCTaGAGCTCCTTGGCAAATTCC	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSAEKVF*SSLANS Trigger: GGAATTTGCCAAGGAGCTTCAGAAAACTTTTTCTGC...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCAGGGCAGGTCAGTTTTaGGAATTTAATGAGGTAGTC	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSRAGQF*EFNEVV Trigger: GACTACCTCATTAAATTCTCAAAACTGACCTGCCCT...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTGAATCTGGCTCATaGGGTCCTGCAGTTTTTCTT	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFILESGS*GPAVFL Trigger: AAGAAAAACTGCAGGACCTCATGAGCCAGATTCAAG...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCACATCTCAGGGGTCTCTaGGGTCGTAAACTCTGTTTC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSHLRGL*GRKLCF Trigger: GAAACAGAGTTTACGACCTCAGAGACCCCTGAGATG...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGTGTGCTAATGGCTTCTaGACTCCCACTTGCAGGAGG	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVCANGF*TPTCRR Trigger: CCTCCTGCAAGTGGGAGTTCAGAAGCCATTAGCACA...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTACTGTCTGCATGGCCTaGAAAGGTGCTGTGCTAATG	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSTVCMA*KGAVLM Trigger: CATTAGCACAGCACCTTTTCAGGCCATGCAGACAGT...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTTTGAATCTACCAAGCTaGAGATCAAAGGTCTCTCCC	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFILNLPS*RSKVSP Trigger: GGGAGAGACCTTTGATCTTCAGCTTGGTAGATTCAA...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTATCTTGTTCTTTCTGTaGCTGAACCACCCATGGCTT	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIILFFL*LNHPWL Trigger: AAGCCATGGGTGGTTCAGTCACAGAAAGAACAAGAT...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCCGTGGAGGCAGAGGTaGATTAACATTAAACACTGT	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIPWRQR*INIKHC Trigger: ACAGTGTTTAATGTTAATGCACCTCTGCCTCCACGG...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATGCTTCCAACTGGTCTaGGTTAAGCTGCTCTCCATT	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLCFQLV*VKLLSI Trigger: AATGGAGAGCAGCTTAACCCAGACCAGTTGGAAGCA...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTGCTGGGAGCTGGCATTaGGATACTGTCTGTGTACTT	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSAGSWH*DTVCVL Trigger: AAGTACACAGACAGTATCCCAATGCCAGCTCCCAGC...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCACCAGATTGGATGTTCTaGCAGCTGAGAAGGCAACTC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSPDWMF*QLRRQL Trigger: GAGTTGCCTTCTCAGCTGCCAGAACATCCAATCTGG...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATTGCTTGCTGTCTCATaGTCTGGAGCACCATCGTTG	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSLLAVS*SGAPSL Trigger: CAACGATGGTGCTCCAGACCATGAGACAGCAAGCAA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATTCCTCGTCAGGACTTaGCCATTTGGTAAGAGGCCT	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSFLVRT*PFGKRP Trigger: AGGCCTCTTACCAAATGGCCAAGTCCTGACGAGGAA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTGCAGAAAAAGTTTTCTaGAGCTCCTTGGCAAATTCC	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIAEKVF*SSLANS Trigger: GGAATTTGCCAAGGAGCTTCAGAAAACTTTTTCTGC...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCCATTCAAGCCCCCTTTaGAGTCTTTTTGTACATGTT	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSHSSPL*SLFVHV Trigger: AACATGTACAAAAAGACTTCAAAGGGGGCTTGAATG...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTGTAGTCAAGTTCTTTTaGAGGCAAATACATTGCACC	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTVVKFF*RQIHCT Trigger: GGTGCAATGTATTTGCCTTCAAAAGAACTTGACTAC...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTTTCCGTAAGAGATTCTaGCTCTTTGATAGACTCACT	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTFRKRF*LFDRLT Trigger: AGTGAGTCTATCAAAGAGTCAGAATCTCTTACGGAA...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACTTGAATCTGGCTCATaGGGTCCTGCAGTTTTTCTT	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLLESGS*GPAVFL Trigger: AAGAAAAACTGCAGGACCTCATGAGCCAGATTCAAG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTCACCAAGCAAGCATTTaGGCTACAAGTAACCGGAGA	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSHQASI*ATSNRR Trigger: TCTCCGGTTACTTGTAGCTCAAATGCTTGCTTGGTG...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACTACTGATAAATGGCTaGGCAGGTCTGGGAAACATA	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLLLING*AGLGNI Trigger: TATGTTTCCCAGACCTGCTCAGCCATTTATCAGTAG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR TCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTACCACTAGATGTCCCTaGTCTTTTATAACACTGCTG	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFITTRCP*SFITLL Trigger: CAGCAGTGTTATAAAAGATCAGGGACATCTAGTGGT...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR TCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTTCTTTCTTCTTCTCCTaGCCATCTGGCTCTGGAAGT	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSSFFFS*PSGSGS Trigger: ACTTCCAGAGCCAGATGGTCAGGAGAAGAAGAAAGA...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGACATTCTGCTCTTCTTaGGGACTGCCCACTTTGGAC	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVTFCSS*GLPTLD Trigger: GTCCAAAGTGGGCAGTCCTCAAGAAGAGCAGAATGT...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTTGTTCTTTCTGTGACTaGACCACCCATGGCTTTGGT	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSCSFCD*TTHGFG Trigger: ACCAAAGCCATGGGTGGTTCAGTCACAGAAAGAACA...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACA	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIKYKDD*SIWSST Trigger: TGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTT...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAAAACATACTCGTGGGTaGTGGGTAAAAGGCAAGGCT	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSKHTRG*WVKGKA Trigger: AGCCTTGCCTTTTACCCAGCACCCACGAGTATGTTT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR GCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTTGCTTCTGCTCTTCCTaGAATGTTGGCCTGAGTTTC	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSCFCSS*NVGLSF Trigger: GAAACTCAGGCCAACATTGCAGGAAGAGCAGAAGCA...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTGCTTTCAGCAGATCTTaGCTCAGTGCAGAAAAAGTT	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIAFSRS*LSAEKV Trigger: AACTTTTTCTGCACTGAGCCAAGATCTGCTGAAAGC...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACAATACTGGATCCTTTaGAAGGGCAGAAGAAGAGTC	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLQYWIL*KGRRRV Trigger: GACTCTTCTTCTGCCCTTCCAAAGGATCCAGTATTG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGCTTGCAGGAGGTAACTaGAAGCTCTTTGACAGGGGA	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVLAGGN*KLFDRG Trigger: TCCCCTGTCAAAGAGCTTCCAGTTACCTCCTGCAAG...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGCCAGATTGGATGTTCTaGCAGCTGAGAAGGCAACTC	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVPDWMF*QLRRQL Trigger: GAGTTGCCTTCTCAGCTGCCAGAACATCCAATCTGG...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTGTAAGTGCCATTCACTaGGCAATTGAATCTACCAAG	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFIVSAIH*AIESTK Trigger: CTTGGTAGATTCAATTGCCCAGTGAATGGCACTTAC...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCGTTAAGAAACTCTTGTaGCTGTATCTCTGGTTGTAC	+
Preference number: 4 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSVKKLL*LYLWLY Trigger: GTACAACCAGAGATACAGCCACAAGAGTTTCTTAAC...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTTTAGCATGTGAAAAATaGACACGTAAGTGCCATTCA	+
Preference number: 4 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTLACEK*TRKCHS Trigger: TGAATGGCACTTACGTGTTCATTTTTCACATGCTAA...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAAATATAGGTTTCATATaGCTGGGAAGGAGATGCAGC	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLNIGFI*LGRRCS Trigger: GCTGCATCTCCTTCCCAGGCATATGAAACCTATATT...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTCCGTGGAGGCAGAGGTaGATTAACATTAAACACTGT	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSPWRQR*INIKHC Trigger: ACAGTGTTTAATGTTAATGCACCTCTGCCTCCACGG...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATTCTTGTTCTTTCCGTaGAGGCAGAGGTGCATTAAC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSFLFFP*RQRCIN Trigger: GTTAATGCACCTCTGCCTCCACGGAAAGAACAAGAA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAGTAAGTGCCATTCACTaGGCAATTGAATCTACCAAG	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLVSAIH*AIESTK Trigger: CTTGGTAGATTCAATTGCCCAGTGAATGGCACTTAC...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAGTAGTCAAGTTCTTTTaGAGGCAAATACATTGCACC	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLVVKFF*RQIHCT Trigger: GGTGCAATGTATTTGCCTTCAAAAGAACTTGACTAC...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAAGGGCAGGTCAGTTTTaGGAATTTAATGAGGTAGTC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSRAGQF*EFNEVV Trigger: GACTACCTCATTAAATTCTCAAAACTGACCTGCCCT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCCGTAAGAGATTCTaGCTCTTTGATAGACTCACT	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLFRKRF*LFDRLT Trigger: AGTGAGTCTATCAAAGAGTCAGAATCTCTTACGGAA...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGCTACTGATAAATGGCTaGGCAGGTCTGGGAAACATA	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVLLING*AGLGNI Trigger: TATGTTTCCCAGACCTGCTCAGCCATTTATCAGTAG...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR TCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTCATTCACTGGGCAATTaGATCTACCAAGCTGAAGAT	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSHSLGN*IYQAED Trigger: ATCTTCAGCTTGGTAGATTCAATTGCCCAGTGAATG...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCACATTCACTGGGCAATTaGATCTACCAAGCTGAAGAT	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSHSLGN*IYQAED Trigger: ATCTTCAGCTTGGTAGATTCAATTGCCCAGTGAATG...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTTTAGCATGTGAAAAATaGACACGTAAGTGCCATTCA	+
Preference number: 4 (lower is better) Translates to: QSLGQGLLFLRSTSENFILACEK*TRKCHS Trigger: TGAATGGCACTTACGTGTTCATTTTTCACATGCTAA...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACAGATCTTGGCTCAGTaGAGAAAAAGTTTTCTGAAG	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLQILAQ*RKSFLK Trigger: CTTCAGAAAACTTTTTCTGCACTGAGCCAAGATCTG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGATTTGGAGAAGCAAGTaGAGAAGCTGGCTTTGGCTT	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVIWRSK*RSWLWL Trigger: AAGCCAAAGCCAGCTTCTGCACTTGCTTCTCCAAAT...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATCAAACACAATAGGTTaGTCTAAAGTTCCAGGAGCC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSSNTIG*SKVPGA Trigger: GGCTCCTGGAACTTTAGACCAACCTATTGTGTTTGA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTTCAAACACAATAGGTTaGTCTAAAGTTCCAGGAGCC	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSSNTIG*SKVPGA Trigger: GGCTCCTGGAACTTTAGACCAACCTATTGTGTTTGA...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAACTTTCAAAATAACCTaGGTGCAGCAATTTAGACAG	+
Preference number: 4 (lower is better) Translates to: LGQGLLFLRSTSENFILLTFKIT*VQQFRQ Trigger: CTGTCTAAATTGCTGCACTCAGGTTATTTTGAAAGT...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGACCACTAGATGTCCCTaGTCTTTTATAACACTGCTG	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVTTRCP*SFITLL Trigger: CAGCAGTGTTATAAAAGATCAGGGACATCTAGTGGT...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR GCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCACAGATCTTGGCTCAGTaGAGAAAAAGTTTTCTGAAG	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSQILAQ*RKSFLK Trigger: CTTCAGAAAACTTTTTCTGCACTGAGCCAAGATCTG...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGAAGTACAAGGATGACTaGTCCATCTGGTCTTCAACA	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVKYKDD*SIWSST Trigger: TGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTT...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR GCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTTTTCCTAGCATAATCTaGTTCCCAGGATTGTTCTAC	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSFPSII*FPGLFY Trigger: GTAGAACAATCCTGGGAAGCAGATTATGCTAGGAAA...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGGCTTTCAGCAGATCTTaGCTCAGTGCAGAAAAAGTT	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVAFSRS*LSAEKV Trigger: AACTTTTTCTGCACTGAGCCAAGATCTGCTGAAAGC...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAACTAAGGAGTGTTTCTaGTTCTCAGCATTGTTTTCC	+
Preference number: 4 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSTKECF*FSALFS Trigger: GGAAAACAATGCTGAGAACCAGAAACACTCCTTAGT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR TCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTACTTTCAAAATAACCTaGGTGCAGCAATTTAGACAG	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSTFKIT*VQQFRQ Trigger: CTGTCTAAATTGCTGCACTCAGGTTATTTTGAAAGT...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTAGAATTCCTGAGAACTaGGACACTTTCAAAATAACC	+
Preference number: 4 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSRIPEN*DTFKIT Trigger: GGTTATTTTGAAAGTGTCCCAGTTCTCAGGAATTCT...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CCA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGAGAATTCCTGAGAACTaGGACACTTTCAAAATAACC	+
Preference number: 4 (lower is better) Translates to: IHIRCVTSKATSQFIKLVRIPEN*DTFKIT Trigger: GGTTATTTTGAAAGTGTCCCAGTTCTCAGGAATTCT...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 90 bp	TTGCTGAGGCAGGGGATAGATATGGACTGGCAGGATGGCGGCTGCTaGGCTTGTCACTGGCACATCCACTGGGGTCATGCTCCGAGAGTC	+
Preference number: 5 (lower is better) Translates to: LLRQGIDMDWQDGGC*ACHWHIHWGHAPRV Trigger: GACTCTCGGAGCATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCCCTGCCTCAGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 90 bp	CATTTGCTGAGGCAGGGGATAGATATGGACTGGCAGGATGGCGGCTaGTGGGCTTGTCACTGGCACATCCACTGGGGTCATGCTCCGAGA	+
Preference number: 5 (lower is better) Translates to: HLLRQGIDMDWQDGG*WACHWHIHWGHAPR Trigger: TCTCGGAGCATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCCCTGCCTCAGCAAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 90 bp	CAACTCGCATTTGCTGAGGCAGGGGATAGATATGGACTGGCAGGATaGCGGCTGCTGGGCTTGTCACTGGCACATCCACTGGGGTCATGC	+
Preference number: 5 (lower is better) Translates to: QLAFAEAGDRYGLAG*RLLGLSLAHPLGSC Trigger: GCATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCCCTGCCTCAGCAAATGCGAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 90 bp	GCTGCACTGAAGCCTGTTCTCTGCACACAGGGGTGGTCCAGGATCTaGTGCCACTCTGTTCACTCTGCACAGATACTGCCCAGGATCCAG	+
Preference number: 5 (lower is better) Translates to: AALKPVLCTQGWSRI*CHSVHSAQILPRIQ Trigger: CTGGATCCTGGGCAGTATCTGTGCAGAGTGAACAGAGTGGCAGCAGATCCTGGACCACCCCTGTGTGCAGAGAACAGGCTTCAGTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CCA 90 bp	CTGGAGTCCCAGGCTGCACTGAAGCCTGTTCTCTGCACACAGGGGTaGTCCAGGATCTGCTGCCACTCTGTTCACTCTGCACAGATACTG	+
Preference number: 5 (lower is better) Translates to: LESQAALKPVLCTQG*SRICCHSVHSAQIL Trigger: CAGTATCTGTGCAGAGTGAACAGAGTGGCAGCAGATCCTGGACCACCCCTGTGTGCAGAGAACAGGCTTCAGTGCAGCCTGGGACTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS TCA 90 bp	GTTCTCAGCATTGTTTTCCCAGGATACTGGAGTCCCAGGCTGCACTaGAGCCTGTTCTCTGCACACAGGGGTGGTCCAGGATCTGCTGCC	+
Preference number: 5 (lower is better) Translates to: VLSIVFPGYWSPRLH*SLFSAHRGGPGSAA Trigger: GGCAGCAGATCCTGGACCACCCCTGTGTGCAGAGAACAGGCTTCAGTGCAGCCTGGGACTCCAGTATCCTGGGAAAACAATGCTGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS GCA 90 bp	TTTCCCAGGATACTGGAGTCCCAGGCTGCACTGAAGCCTGTTCTCTaGACACAGGGGTGGTCCAGGATCTGCTGCCACTCTGTTCACTCT	+
Preference number: 5 (lower is better) Translates to: FPRILESQAALKPVL*TQGWSRICCHSVHS Trigger: AGAGTGAACAGAGTGGCAGCAGATCCTGGACCACCCCTGTGTGCAGAGAACAGGCTTCAGTGCAGCCTGGGACTCCAGTATCCTGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS TCA 90 bp	AGCTGGCTTTGGCTTGCAGGGGGAGACCACCATCTCAGGGGTCTCTaGGGTCGTAAACTCTGTTTCAGATCCCGAAGAAGCCTGATCAGT	+
Preference number: 5 (lower is better) Translates to: SWLWLAGGDHHLRGL*GRKLCFRSRRSLIS Trigger: ACTGATCAGGCTTCTTCGGGATCTGAAACAGAGTTTACGACCTCAGAGACCCCTGAGATGGTGGTCTCCCCCTGCAAGCCAAAGCCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	CCCTGTGTAAGCGCAGCCATATCTGGTCTCCCTGGAGGAGCTGGAGAACGGCATATTCACAGCCAGCTCTaGAATTTGCCTGAAGACCAC	+
Preference number: 5 (lower is better) Translates to: PCVSAAISGLPGGAGERHIHSQL*NLPEDH Trigger: GTGGTCTTCAGGCAAATTCAAGAGCTGGCTGTGAAT...ATGCCGTTCTCCAGCTCCTCCAGGGAGACCAGATATGGCTGCGCTTACACAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	AGGAGCTGGAGAACGGCATGGTTGCTTGCTGTCTCATGGTCTGGAGCACCATCGGCTGCCATTGCTTACTaGAACAGTTCCATCAGGATG	+
Preference number: 5 (lower is better) Translates to: RSWRTAWLLAVSWSGAPSAAIAY*NSSIRM Trigger: CATCCTGATGGAACTGTTCAAGTAAGCAATGGCAGC...CGATGGTGCTCCAGACCATGAGACAGCAAGCAACCATGCCGTTCTCCAGCTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTTGGCGGCTGCTGGGCTaGTCACTGGCACATCCACTG	+
Preference number: 5 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTWRLLG*SLAHPL Trigger: CAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCA...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 90 bp	GTTGCTTGCTGTCTCATGGTCTGGAGCACCATCGTTGGCATAGGCTaGCACCAAGACCTCCTCATTCTTCATCAGGTTGACATACAGTGG	+
Preference number: 5 (lower is better) Translates to: VACCLMVWSTIVGIG*HQDLLILHQVDIQW Trigger: CCACTGTATGTCAACCTGATGAAGAATGAGGAGGTCTTGGTGTCAGCCTATGCCAACGATGGTGCTCCAGACCATGAGACAGCAAGCAAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 90 bp	TGCCCAGGATCCAGGAGGCAGCTTCTTTGGATCTTGTTCTTTCTGTaGCTGAACCACCCATGGCTTTGGTGTCTCCTGTACATTCTGCTC	+
Preference number: 5 (lower is better) Translates to: CPGSRRQLLWILFFL*LNHPWLWCLLYILL Trigger: GAGCAGAATGTACAGGAGACACCAAAGCCATGGGTGGTTCAGTCACAGAAAGAACAAGATCCAAAGAAGCTGCCTCCTGGATCCTGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CCA 90 bp	GCTTACTTGAACAGTTCCATCAGGATGATAACCTGCACCAGTCTCTaGAGGCTGAGTTGTCTGGTCTATGTGTACAGCTGGGAGCTGGCA	+
Preference number: 5 (lower is better) Translates to: AYLNSSIRMITCTSL*RLSCLVYVYSWELA Trigger: TGCCAGCTCCCAGCTGTACACATAGACCAGACAACTCAGCCTCCAGAGACTGGTGCAGGTTATCATCCTGATGGAACTGTTCAAGTAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCGTGCAGAAGCTGGCTTaGGCTTGCAGGGGGAGACCA	+
Preference number: 5 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSVQKLA*ACRGRP Trigger: TGGTCTCCCCCTGCAAGCCAAAGCCAGCTTCTGCAC...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 90 bp	CAGGTCTGGGAAACATACTCGTGGGTGCTGGGTAAAAGGCAAGGCTaGCATTGCTTACTTGAACAGTTCCATCAGGATGATAACCTGCAC	+
Preference number: 5 (lower is better) Translates to: QVWETYSWVLGKRQG*HCLLEQFHQDDNLH Trigger: GTGCAGGTTATCATCCTGATGGAACTGTTCAAGTAAGCAATGGCAGCCTTGCCTTTTACCCAGCACCCACGAGTATGTTTCCCAGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS TCA 90 bp	GGGGTCTCTGAGGTCGTAAACTCTGTTTCAGATCCCGAAGAAGCCTaGTCAGTAGTCACCAAGCAAGCATTTGAGCTACAAGTAACCGGA	+
Preference number: 5 (lower is better) Translates to: GVSEVVNSVSDPEEA*SVVTKQAFELQVTG Trigger: TCCGGTTACTTGTAGCTCAAATGCTTGCTTGGTGACTACTGATCAGGCTTCTTCGGGATCTGAAACAGAGTTTACGACCTCAGAGACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 90 bp	CAGGATCCAGGAGGCAGCTTCTTTGGATCTTGTTCTTTCTGTGACTaGACCACCCATGGCTTTGGTGTCTCCTGTACATTCTGCTCTTCT	+
Preference number: 5 (lower is better) Translates to: QDPGGSFFGSCSFCD*TTHGFGVSCTFCSS Trigger: AGAAGAGCAGAATGTACAGGAGACACCAAAGCCATGGGTGGTTCAGTCACAGAAAGAACAAGATCCAAAGAAGCTGCCTCCTGGATCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS GCA 90 bp	TGGGAAACATACTCGTGGGTGCTGGGTAAAAGGCAAGGCTGCCATTaGTTACTTGAACAGTTCCATCAGGATGATAACCTGCACCAGTCT	+
Preference number: 5 (lower is better) Translates to: WETYSWVLGKRQGCH*LLEQFHQDDNLHQS Trigger: AGACTGGTGCAGGTTATCATCCTGATGGAACTGTTCAAGTAAGCAATGGCAGCCTTGCCTTTTACCCAGCACCCACGAGTATGTTTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS GCA 90 bp	ACTACTGATAAATGGCTGAGCAGGTCTGGGAAACATACTCGTGGGTaGTGGGTAAAAGGCAAGGCTGCCATTGCTTACTTGAACAGTTCC	+
Preference number: 5 (lower is better) Translates to: TTDKWLSRSGKHTRG*WVKGKAAIAYLNSS Trigger: GGAACTGTTCAAGTAAGCAATGGCAGCCTTGCCTTTTACCCAGCACCCACGAGTATGTTTCCCAGACCTGCTCAGCCATTTATCAGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS CCA 90 bp	ACTGATAAATGGCTGAGCAGGTCTGGGAAACATACTCGTGGGTGCTaGGTAAAAGGCAAGGCTGCCATTGCTTACTTGAACAGTTCCATC	+
Preference number: 5 (lower is better) Translates to: TDKWLSRSGKHTRGC*VKGKAAIAYLNSSI Trigger: GATGGAACTGTTCAAGTAAGCAATGGCAGCCTTGCCTTTTACCCAGCACCCACGAGTATGTTTCCCAGACCTGCTCAGCCATTTATCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS CCA 90 bp	TTAGGCACATCTTTGGGTTCTACATTTAACTTCCTCGTCAGGACTTaGCCATTTGGTAAGAGGCCTGCTGAAGCTGCTCCCCAGGACTTT	+
Preference number: 5 (lower is better) Translates to: LGTSLGSTFNFLVRT*PFGKRPAEAAPQDF Trigger: AAAGTCCTGGGGAGCAGCTTCAGCAGGCCTCTTACCAAATGGCCAAGTCCTGACGAGGAAGTTAAATGTAGAACCCAAAGATGTGCCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCCCGCTGGTTTTCCCCTaGCTGATCCTGGTTCACTTG	+
Preference number: 5 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSPLVFP*LILVHL Trigger: CAAGTGAACCAGGATCAGCAAGGGGAAAACCAGCGG...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCGTTCCAGGAGCCAGATaGGATGTTCTGGCAGCTGAG	+
Preference number: 5 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSVPGAR*DVLAAE Trigger: CTCAGCTGCCAGAACATCCAATCTGGCTCCTGGAAC...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCGAACGGCATGGTTGCTaGCTGTCTCATGGTCTGGAG	+
Preference number: 5 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSERHGC*LSHGLE Trigger: CTCCAGACCATGAGACAGCAAGCAACCATGCCGTTC...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 90 bp	CCAGGACTCCAAGGACTCTTTCTTCTTCTCCTGACCATCTGGCTCTaGAAGTGTATTCCAGCATTTGAGGAGACTTGGTTTCCTAGCATA	+
Preference number: 5 (lower is better) Translates to: PGLQGLFLLLLTIWL*KCIPAFEETWFPSI Trigger: TATGCTAGGAAACCAAGTCTCCTCAAATGCTGGAATACACTTCCAGAGCCAGATGGTCAGGAGAAGAAGAAAGAGTCCTTGGAGTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CCA 90 bp	AGACTTCCAGGACTCCAAGGACTCTTTCTTCTTCTCCTGACCATCTaGCTCTGGAAGTGTATTCCAGCATTTGAGGAGACTTGGTTTCCT	+
Preference number: 5 (lower is better) Translates to: RLPGLQGLFLLLLTI*LWKCIPAFEETWFP Trigger: AGGAAACCAAGTCTCCTCAAATGCTGGAATACACTTCCAGAGCCAGATGGTCAGGAGAAGAAGAAAGAGTCCTTGGAGTCCTGGAAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGCTGGGAGCTGGCATaGGGATACTGTCTGTGTACT	+
Preference number: 5 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTSWELA*GYCLCT Trigger: AGTACACAGACAGTATCCCAATGCCAGCTCCCAGCT...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGTGGCGGCTGCTGGGCTaGTCACTGGCACATCCACTG	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVWRLLG*SLAHPL Trigger: CAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCA...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 90 bp	CTGAGTTTCCCCTGTACTAAGGAAACCACAGGCTTTGATACCTCCTaGGTCTTAAGAGAAGACTTCCAGGACTCCAAGGACTCTTTCTTC	+
Preference number: 5 (lower is better) Translates to: LSFPCTKETTGFDTS*VLREDFQDSKDSFF Trigger: GAAGAAAGAGTCCTTGGAGTCCTGGAAGTCTTCTCTTAAGACTCAGGAGGTATCAAAGCCTGTGGTTTCCTTAGTACAGGGGAAACTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CCA 90 bp	AAGGTCTCTCCCAAGTTGTTCAGGAGAAGATCAAACACAATAGGTTaGTCTAAAGTTCCAGGAGCCAGATTGGATGTTCTGGCAGCTGAG	+
Preference number: 5 (lower is better) Translates to: KVSPKLFRRRSNTIG*SKVPGARLDVLAAE Trigger: CTCAGCTGCCAGAACATCCAATCTGGCTCCTGGAACTTTAGACCAACCTATTGTGTTTGATCTTCTCCTGAACAACTTGGGAGAGACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 90 bp	CAGGACTTTAGAGAAATCTGTGATTGTGGTACTAAGGAGTGTTTCTaGTTCTCAGCATTGTTTTCCCAGGATACTGGAGTCCCAGGCTGC	+
Preference number: 5 (lower is better) Translates to: QDFREICDCGTKECF*FSALFSQDTGVPGC Trigger: GCAGCCTGGGACTCCAGTATCCTGGGAAAACAATGCTGAGAACCAGAAACACTCCTTAGTACCACAATCACAGATTTCTCTAAAGTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCTTGACAGGGGAGGATTaGGAGAAGCAAGTGCAGAAG	+
Preference number: 5 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSLTGED*EKQVQK Trigger: CTTCTGCACTTGCTTCTCCAAATCCTCCCCTGTCAA...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAGTTCCAGGAGCCAGATaGGATGTTCTGGCAGCTGAG	+
Preference number: 5 (lower is better) Translates to: LGQGLLFLRSTSENFILLVPGAR*DVLAAE Trigger: CTCAGCTGCCAGAACATCCAATCTGGCTCCTGGAAC...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 90 bp	CGTTGGCATAGGCTGACACCAAGACCTCCTCATTCTTCATCAGGTTaGCATACAGTGGTACATTCACAGCCAGCTTTAGCATGTGAAAAA	+
Preference number: 5 (lower is better) Translates to: RWHRLTPRPPHSSSG*HTVVHSQPALACEK Trigger: TTTTTCACATGCTAAAGCTGGCTGTGAATGTACCACTGTATGTCAACCTGATGAAGAATGAGGAGGTCTTGGTGTCAGCCTATGCCAACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGAATATTCTCTAGCTaGCAGCTGCAGCTGGCTGTA	+
Preference number: 5 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTRIFSS*QLQLAV Trigger: TACAGCCAGCTGCAGCTGCAAGCTAGAGAATATTCT...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS CCA 90 bp	CTGACCATCTGGCTCTGGAAGTGTATTCCAGCATTTGAGGAGACTTaGTTTCCTAGCATAATCTGCTTCCCAGGATTGTTCTACATTTTC	+
Preference number: 5 (lower is better) Translates to: LTIWLWKCIPAFEET*FPSIICFPGLFYIF Trigger: GAAAATGTAGAACAATCCTGGGAAGCAGATTATGCTAGGAAACCAAGTCTCCTCAAATGCTGGAATACACTTCCAGAGCCAGATGGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGCCGCTGGTTTTCCCCTaGCTGATCCTGGTTCACTTG	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVPLVFP*LILVHL Trigger: CAAGTGAACCAGGATCAGCAAGGGGAAAACCAGCGG...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGGGGCTTAGGCACCTCTaGTGGCTGTATCTCTGGTTG	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVGLRHL*WLYLWL Trigger: CAACCAGAGATACAGCCACAAGAGGTGCCTAAGCCC...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072324.12
CDS-3UTR CAA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTCTTCTGAACTCCCACTaGCAGGAGGTAACTGGAAGC	+
Preference number: 5 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSLLNSH*QEVTGS Trigger: GCTTCCAGTTACCTCCTGCAAGTGGGAGTTCAGAAG...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCACTTCTGAACTCCCACTaGCAGGAGGTAACTGGAAGC	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSLLNSH*QEVTGS Trigger: GCTTCCAGTTACCTCCTGCAAGTGGGAGTTCAGAAG...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAAGCTGGGAGCTGGCATaGGGATACTGTCTGTGTACT	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSSWELA*GYCLCT Trigger: AGTACACAGACAGTATCCCAATGCCAGCTCCCAGCT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAGAAGGCAACTCGCATTaGCTGAGGCAGGGGATAGAT	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSEGNSH*LRQGID Trigger: ATCTATCCCCTGCCTCAGCAAATGCGAGTTGCCTTC...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGGAACGGCATGGTTGCTaGCTGTCTCATGGTCTGGAG	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVERHGC*LSHGLE Trigger: CTCCAGACCATGAGACAGCAAGCAACCATGCCGTTC...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTTACATTCTGCTCTTCTaGAGGACTGCCCACTTTGGA	+
Preference number: 5 (lower is better) Translates to: QSLGQGLLFLRSTSENFIYILLF*RTAHFG Trigger: TCCAAAGTGGGCAGTCCTCAAGAAGAGCAGAATGTA...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAGAACCACCCATGGCTTaGGTGTCTCCTGTACATTCT	+
Preference number: 5 (lower is better) Translates to: LGQGLLFLRSTSENFILLEPPMA*VSPVHS Trigger: AGAATGTACAGGAGACACCAAAGCCATGGGTGGTTC...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTTTCTGGTTCTCAGCATaGTTTTCCCAGGATACTGGA	+
Preference number: 5 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTFWFSA*FSQDTG Trigger: TCCAGTATCCTGGGAAAACAATGCTGAGAACCAGAA...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATCAGGACTTGGCCATTaGGTAAGAGGCCTGCTGAAG	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSSGLGH*VRGLLK Trigger: CTTCAGCAGGCCTCTTACCAAATGGCCAAGTCCTGA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCCCATTCAAGCCCCCTTaGAAGTCTTTTTGTACATGT	+
Preference number: 5 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSPFKPP*KSFCTC Trigger: ACATGTACAAAAAGACTTCAAAGGGGGCTTGAATGG...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGGAAGGCAACTCGCATTaGCTGAGGCAGGGGATAGAT	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVEGNSH*LRQGID Trigger: ATCTATCCCCTGCCTCAGCAAATGCGAGTTGCCTTC...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTAAGGTCTCTCCCAAGTaGTTCAGGAGAAGATCAAAC	+
Preference number: 5 (lower is better) Translates to: QSLGQGLLFLRSTSENFIKVSPK*FRRRSN Trigger: GTTTGATCTTCTCCTGAACAACTTGGGAGAGACCTT...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 90 bp	TTTGTGTTTAAGGCATATAAGTCCATTATCAATATAGGTTTCATATaGCTGGGAAGGAGATGCAGCAGAACTGAGAGTAGACTGCAGGGG	+
Preference number: 5 (lower is better) Translates to: FVFKAYKSIINIGFI*LGRRCSRTESRLQG Trigger: CCCCTGCAGTCTACTCTCAGTTCTGCTGCATCTCCTTCCCAGGCATATGAAACCTATATTGATAATGGACTTATATGCCTTAAACACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000139914.2
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGTTGACAGGGGAGGATTaGGAGAAGCAAGTGCAGAAG	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVLTGED*EKQVQK Trigger: CTTCTGCACTTGCTTCTCCAAATCCTCCCCTGTCAA...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAGCTGCCATTGCTTACTaGAACAGTTCCATCAGGATG	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSAAIAY*NSSIRM Trigger: CATCCTGATGGAACTGTTCAAGTAAGCAATGGCAGC...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAAGAATATTCTCTAGCTaGCAGCTGCAGCTGGCTGTA	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSRIFSS*QLQLAV Trigger: TACAGCCAGCTGCAGCTGCAAGCTAGAGAATATTCT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTAAAGGTCTCTCCCAAGTaGTTCAGGAGAAGATCAAAC	+
Preference number: 5 (lower is better) Translates to: LGQGLLFLRSTSENFILLKVSPK*FRRRSN Trigger: GTTTGATCTTCTCCTGAACAACTTGGGAGAGACCTT...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTTCATTCTTCATCAGGTaGACATACAGTGGTACATTC	+
Preference number: 5 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTSFFIR*TYSGTF Trigger: GAATGTACCACTGTATGTCAACCTGATGAAGAATGA...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTCCCTTTGAAGTCTTTTaGTACATGTTCTTGTGTCAA	+
Preference number: 5 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTPFEVF*YMFLCQ Trigger: TTGACACAAGAACATGTACAAAAAGACTTCAAAGGG...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATGGCTGTATCTCTGGTaGTACAAGTTCCGTAAGAGA	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSWLYLW*YKFRKR Trigger: TCTCTTACGGAACTTGTACAACCAGAGATACAGCCA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATCAATACTGGATCCTTaGGAAGGGCAGAAGAAGAGT	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSSILDP*EGQKKS Trigger: ACTCTTCTTCTGCCCTTCCAAAGGATCCAGTATTGA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTAAAGTTATAAGTTCCTaGAATCTGGCTCATGAGGTC	+
Preference number: 5 (lower is better) Translates to: QSLGQGLLFLRSTSENFIKVISS*NLAHEV Trigger: GACCTCATGAGCCAGATTCAAGGAACTTATAACTTT...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	CAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTATTGCACTTGAGGGTTaGTCAAAATCTAGAACAGAC	+
Preference number: 5 (lower is better) Translates to: QSLGQGLLFLRSTSENFIIALEG*SKSRTD Trigger: GTCTGTTCTAGATTTTGACAAACCCTCAAGTGCAAT...AATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	TTTTTCCCAACCAGTCAATCACTAGGGCAAGGACTGCTTTTCCTTAGATCCACTATGATGGAATTGCACTaGAGGGTTTGTCAAAATCTA	+
Preference number: 5 (lower is better) Translates to: FFPTSQSLGQGLLFLRSTMMELH*RVCQNL Trigger: TAGATTTTGACAAACCCTCAAGTGCAATTCCATCAT...AGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAGTGATTGACTGGTTGGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGGCTGCCATTGCTTACTaGAACAGTTCCATCAGGATG	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVAAIAY*NSSIRM Trigger: CATCCTGATGGAACTGTTCAAGTAAGCAATGGCAGC...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	GGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTCAGTAAGCATCTGCTTCCCAGGATaGTTCTACATTTTCTTGTTT	+
Preference number: 5 (lower is better) Translates to: GTTRHGNLSEVEAFNSVSICFPG*FYIFLF Trigger: AAACAAGAAAATGTAGAACAATCCTGGGAAGCAGAT...GCTTACTGAATTGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGCAGGAGGCAGCTTCTTaGGATCTTGTTCTTTCTGTG	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVQEAAS*DLVLSV Trigger: CACAGAAAGAACAAGATCCAAAGAAGCTGCCTCCTG...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGTTGAAGGCAAATACATaGCACCATTCAAGCCCCCTT	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVLKANT*HHSSPL Trigger: AAGGGGGCTTGAATGGTGCAATGTATTTGCCTTCAA...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGTGGCTGTATCTCTGGTaGTACAAGTTCCGTAAGAGA	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVWLYLW*YKFRKR Trigger: TCTCTTACGGAACTTGTACAACCAGAGATACAGCCA...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGTCAATACTGGATCCTTaGGAAGGGCAGAAGAAGAGT	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVSILDP*EGQKKS Trigger: ACTCTTCTTCTGCCCTTCCAAAGGATCCAGTATTGA...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAAGTGTATTCCAGCATTaGAGGAGACTTGGTTTCCTA	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSSVFQH*RRLGFL Trigger: TAGGAAACCAAGTCTCCTCAAATGCTGGAATACACT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	CTAGGGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTACCCTTTGAAGTCTTTTaGTACATGTTCTTGTGTCAA	+
Preference number: 5 (lower is better) Translates to: LGQGLLFLRSTSENFILLPFEVF*YMFLCQ Trigger: TTGACACAAGAACATGTACAAAAAGACTTCAAAGGG...TAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCCCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTAAAGTTATAAGTTCCTaGAATCTGGCTCATGAGGTC	+
Preference number: 5 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSKVISS*NLAHEV Trigger: GACCTCATGAGCCAGATTCAAGGAACTTATAACTTT...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCAATTGCACTTGAGGGTTaGTCAAAATCTAGAACAGAC	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSIALEG*SKSRTD Trigger: GTCTGTTCTAGATTTTGACAAACCCTCAAGTGCAAT...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATTTTTATTGAGGCACAACGAGGCATGGTAACTTATCTGAAGTTGAGGCATTCATCATTCTTCATCAGGTaGACATACAGTGGTACATTC	+
Preference number: 5 (lower is better) Translates to: IFIEAQRGMVTYLKLRHSSFFIR*TYSGTF Trigger: GAATGTACCACTGTATGTCAACCTGATGAAGAATGA...TGAATGCCTCAACTTCAGATAAGTTACCATGCCTCGTTGTGCCTCAATAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGGGTAGTCAAGTTCTTTaGAAGGCAAATACATTGCAC	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVGSQVL*KANTLH Trigger: GTGCAATGTATTTGCCTTCAAAAGAACTTGACTACC...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	GGCAAGGACTGCTTTTCCTTAGATCCACTAGTGAGAACTTCATTCTTTTATTCTATGATGGAATTGCACTaGAGGGTTTGTCAAAATCTA	+
Preference number: 5 (lower is better) Translates to: GKDCFSLDPLVRTSFFYSMMELH*RVCQNL Trigger: TAGATTTTGACAAACCCTCAAGTGCAATTCCATCAT...AGAATAAAAGAATGAAGTTCTCACTAGTGGATCTAAGGAAAAGCAGTCCTTGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS-3UTR CAA 90 bp	ATACACATTCGCTGTGTGACTAGCAAGGCTACATCACAATTTATAAAGTTAGTGTCATTCTTCATCAGGTaGACATACAGTGGTACATTC	+
Preference number: 5 (lower is better) Translates to: IHIRCVTSKATSQFIKLVSFFIR*TYSGTF Trigger: GAATGTACCACTGTATGTCAACCTGATGAAGAATGA...CACTAACTTTATAAATTGTGATGTAGCCTTGCTAGTCACACAGCGAATGTGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS TCA 90 bp	TTTTTCCTTAGAATTCCTGAGAACTGGGACACTTTCAAAATAACCTaGGTGCAGCAATTTAGACAGCAGGTCTTTCACATGTTTATATGT	+
Preference number: 5 (lower is better) Translates to: FFLRIPENWDTFKIT*VQQFRQQVFHMFIC Trigger: ACATATAAACATGTGAAAGACCTGCTGTCTAAATTGCTGCACTCAGGTTATTTTGAAAGTGTCCCAGTTCTCAGGAATTCTAAGGAAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 72 bp	ATGGACTGGCAGGATGGCGGCTGCTGGGCTTGTCACTaGCACATCCACTGGGGTCATGCTCCGAGAGTCTCC	+
Preference number: 6 (lower is better) Translates to: MDWQDGGCWACH*HIHWGHAPRVS Trigger: GGAGACTCTCGGAGCATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CAA 90 bp	GAGGCAGGGGATAGATATGGACTGGCAGGATGGCGGCTGCTGGGCTaGTCACTGGCACATCCACTGGGGTCATGCTCCGAGAGTCTCCTA	+
Preference number: 6 (lower is better) Translates to: EAGDRYGLAGWRLLG*SLAHPLGSCSESLL Trigger: TAGGAGACTCTCGGAGCATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCCCTGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 72 bp	CTGCTGGGCTTGTCACTGGCACATCCACTGGGGTCATaGTCCGAGAGTCTCCTAGCCCAGAGTCTCCACTGT	+
Preference number: 6 (lower is better) Translates to: LLGLSLAHPLGS*SESLLAQSLHC Trigger: ACAGTGGAGACTCTGGGCTAGGAGACTCTCGGAGCATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 72 bp	AGGCAGGGGATAGATATGGACTGGCAGGATGGCGGCTaGTGGGCTTGTCACTGGCACATCCACTGGGGTCAT	+
Preference number: 6 (lower is better) Translates to: RQGIDMDWQDGG*WACHWHIHWGH Trigger: ATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 72 bp	GGGGTGGTCCAGGATCTGCTGCCACTCTGTTCACTCTaGACAGATACTGCCCAGGATCCAGGAGGCAGCTTC	+
Preference number: 6 (lower is better) Translates to: GVVQDLLPLCSL*TDTAQDPGGSF Trigger: GAAGCTGCCTCCTGGATCCTGGGCAGTATCTGTGCAGAGTGAACAGAGTGGCAGCAGATCCTGGACCACCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CCA 72 bp	CAGGGGATAGATATGGACTGGCAGGATGGCGGCTGCTaGGCTTGTCACTGGCACATCCACTGGGGTCATGCT	+
Preference number: 6 (lower is better) Translates to: QGIDMDWQDGGC*ACHWHIHWGHA Trigger: AGCATGACCCCAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 72 bp	CCTGTTCTCTGCACACAGGGGTGGTCCAGGATCTGCTaGCACTCTGTTCACTCTGCACAGATACTGCCCAGG	+
Preference number: 6 (lower is better) Translates to: PVLCTQGWSRIC*HSVHSAQILPR Trigger: CCTGGGCAGTATCTGTGCAGAGTGAACAGAGTGGCAGCAGATCCTGGACCACCCCTGTGTGCAGAGAACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS GCA 72 bp	ATACTGGAGTCCCAGGCTGCACTGAAGCCTGTTCTCTaGACACAGGGGTGGTCCAGGATCTGCTGCCACTCT	+
Preference number: 6 (lower is better) Translates to: ILESQAALKPVL*TQGWSRICCHS Trigger: AGAGTGGCAGCAGATCCTGGACCACCCCTGTGTGCAGAGAACAGGCTTCAGTGCAGCCTGGGACTCCAGTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CCA 72 bp	TTTGCTGAGGCAGGGGATAGATATGGACTGGCAGGATaGCGGCTGCTGGGCTTGTCACTGGCACATCCACTG	+
Preference number: 6 (lower is better) Translates to: FAEAGDRYGLAG*RLLGLSLAHPL Trigger: CAGTGGATGTGCCAGTGACAAGCCCAGCAGCCGCCATCCTGCCAGTCCATATCTATCCCCTGCCTCAGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 72 bp	CACCCTCTCAGAGTCCCCCGACTACTGATAAATGGCTaGGCAGGTCTGGGAAACATACTCGTGGGTGCTGGG	+
Preference number: 6 (lower is better) Translates to: HPLRVPRLLING*AGLGNILVGAG Trigger: CCCAGCACCCACGAGTATGTTTCCCAGACCTGCTCAGCCATTTATCAGTAGTCGGGGGACTCTGAGAGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS GCA 72 bp	AAGCCTGTTCTCTGCACACAGGGGTGGTCCAGGATCTaGTGCCACTCTGTTCACTCTGCACAGATACTGCCC	+
Preference number: 6 (lower is better) Translates to: KPVLCTQGWSRI*CHSVHSAQILP Trigger: GGGCAGTATCTGTGCAGAGTGAACAGAGTGGCAGCAGATCCTGGACCACCCCTGTGTGCAGAGAACAGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS TCA 72 bp	TGGCTTGCAGGGGGAGACCACCATCTCAGGGGTCTCTaGGGTCGTAAACTCTGTTTCAGATCCCGAAGAAGC	+
Preference number: 6 (lower is better) Translates to: WLAGGDHHLRGL*GRKLCFRSRRS Trigger: GCTTCTTCGGGATCTGAAACAGAGTTTACGACCTCAGAGACCCCTGAGATGGTGGTCTCCCCCTGCAAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 72 bp	TCAGCATTGTTTTCCCAGGATACTGGAGTCCCAGGCTaGACTGAAGCCTGTTCTCTGCACACAGGGGTGGTC	+
Preference number: 6 (lower is better) Translates to: SALFSQDTGVPG*TEACSLHTGVV Trigger: GACCACCCCTGTGTGCAGAGAACAGGCTTCAGTGCAGCCTGGGACTCCAGTATCCTGGGAAAACAATGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS TCA 72 bp	CTGCCCACTTTGGACTTAGGGCTTTCTGGCTTCCACTaGCTGACAGGTGTTATAGGAACCTGCTGCTTCTGC	+
Preference number: 6 (lower is better) Translates to: LPTLDLGLSGFH*LTGVIGTCCFC Trigger: GCAGAAGCAGCAGGTTCCTATAACACCTGTCAGTCAGTGGAAGCCAGAAAGCCCTAAGTCCAAAGTGGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CAA 72 bp	CAGGATGATAACCTGCACCAGTCTCTGGAGGCTGAGTaGTCTGGTCTATGTGTACAGCTGGGAGCTGGCATT	+
Preference number: 6 (lower is better) Translates to: QDDNLHQSLEAE*SGLCVQLGAGI Trigger: AATGCCAGCTCCCAGCTGTACACATAGACCAGACAACTCAGCCTCCAGAGACTGGTGCAGGTTATCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS CAA 90 bp	CTGAACCACCCATGGCTTTGGTGTCTCCTGTACATTCTGCTCTTCTaGAGGACTGCCCACTTTGGACTTAGGGCTTTCTGGCTTCCACTG	+
Preference number: 6 (lower is better) Translates to: LNHPWLWCLLYILLF*RTAHFGLRAFWLPL Trigger: CAGTGGAAGCCAGAAAGCCCTAAGTCCAAAGTGGGCAGTCCTCAAGAAGAGCAGAATGTACAGGAGACACCAAAGCCATGGGTGGTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CAA 90 bp	GTTCACTCTGCACAGATACTGCCCAGGATCCAGGAGGCAGCTTCTTaGGATCTTGTTCTTTCTGTGACTGAACCACCCATGGCTTTGGTG	+
Preference number: 6 (lower is better) Translates to: VHSAQILPRIQEAAS*DLVLSVTEPPMALV Trigger: CACCAAAGCCATGGGTGGTTCAGTCACAGAAAGAACAAGATCCAAAGAAGCTGCCTCCTGGATCCTGGGCAGTATCTGTGCAGAGTGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS TCA 72 bp	TTAAAAGTCTCGCTGTCTCTTTCTGGGCTGCTCACCTaGGAGGAGTCACTCCACCCTGCTCTTGAATTTGCC	+
Preference number: 6 (lower is better) Translates to: LKVSLSLSGLLT*EESLHPALEFA Trigger: GGCAAATTCAAGAGCAGGGTGGAGTGACTCCTCTCAGGTGAGCAGCCCAGAAAGAGACAGCGAGACTTTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 72 bp	CATGGCTTTGGTGTCTCCTGTACATTCTGCTCTTCTTaGGGACTGCCCACTTTGGACTTAGGGCTTTCTGGC	+
Preference number: 6 (lower is better) Translates to: HGFGVSCTFCSS*GLPTLDLGLSG Trigger: GCCAGAAAGCCCTAAGTCCAAAGTGGGCAGTCCTCAAGAAGAGCAGAATGTACAGGAGACACCAAAGCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CAA 72 bp	CCATGGCTTTGGTGTCTCCTGTACATTCTGCTCTTCTaGAGGACTGCCCACTTTGGACTTAGGGCTTTCTGG	+
Preference number: 6 (lower is better) Translates to: PWLWCLLYILLF*RTAHFGLRAFW Trigger: CCAGAAAGCCCTAAGTCCAAAGTGGGCAGTCCTCAAGAAGAGCAGAATGTACAGGAGACACCAAAGCCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CAA 72 bp	GTTCTACATTTAACTTCCTCGTCAGGACTTGGCCATTaGGTAAGAGGCCTGCTGAAGCTGCTCCCCAGGACT	+
Preference number: 6 (lower is better) Translates to: VLHLTSSSGLGH*VRGLLKLLPRT Trigger: AGTCCTGGGGAGCAGCTTCAGCAGGCCTCTTACCAAATGGCCAAGTCCTGACGAGGAAGTTAAATGTAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CCA 72 bp	TTCTTGAGGACTGCCCACTTTGGACTTAGGGCTTTCTaGCTTCCACTGACTGACAGGTGTTATAGGAACCTG	+
Preference number: 6 (lower is better) Translates to: FLRTAHFGLRAF*LPLTDRCYRNL Trigger: CAGGTTCCTATAACACCTGTCAGTCAGTGGAAGCCAGAAAGCCCTAAGTCCAAAGTGGGCAGTCCTCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CCA 72 bp	TCTTTGGGTTCTACATTTAACTTCCTCGTCAGGACTTaGCCATTTGGTAAGAGGCCTGCTGAAGCTGCTCCC	+
Preference number: 6 (lower is better) Translates to: SLGSTFNFLVRT*PFGKRPAEAAP Trigger: GGGAGCAGCTTCAGCAGGCCTCTTACCAAATGGCCAAGTCCTGACGAGGAAGTTAAATGTAGAACCCAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS TCA 72 bp	CCCTGTACTAAGGAAACCACAGGCTTTGATACCTCCTaGGTCTTAAGAGAAGACTTCCAGGACTCCAAGGAC	+
Preference number: 6 (lower is better) Translates to: PCTKETTGFDTS*VLREDFQDSKD Trigger: GTCCTTGGAGTCCTGGAAGTCTTCTCTTAAGACTCAGGAGGTATCAAAGCCTGTGGTTTCCTTAGTACAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS GCA 72 bp	TACTCGTGGGTGCTGGGTAAAAGGCAAGGCTGCCATTaGTTACTTGAACAGTTCCATCAGGATGATAACCTG	+
Preference number: 6 (lower is better) Translates to: YSWVLGKRQGCH*LLEQFHQDDNL Trigger: CAGGTTATCATCCTGATGGAACTGTTCAAGTAAGCAATGGCAGCCTTGCCTTTTACCCAGCACCCACGAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS CCA 72 bp	GGACTCCAAGGACTCTTTCTTCTTCTCCTGACCATCTaGCTCTGGAAGTGTATTCCAGCATTTGAGGAGACT	+
Preference number: 6 (lower is better) Translates to: GLQGLFLLLLTI*LWKCIPAFEET Trigger: AGTCTCCTCAAATGCTGGAATACACTTCCAGAGCCAGATGGTCAGGAGAAGAAGAAAGAGTCCTTGGAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CAA 72 bp	GATTGTGGTACTAAGGAGTGTTTCTGGTTCTCAGCATaGTTTTCCCAGGATACTGGAGTCCCAGGCTGCACT	+
Preference number: 6 (lower is better) Translates to: DCGTKECFWFSA*FSQDTGVPGCT Trigger: AGTGCAGCCTGGGACTCCAGTATCCTGGGAAAACAATGCTGAGAACCAGAAACACTCCTTAGTACCACAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CAA 90 bp	GAAATCTGTGATTGTGGTACTAAGGAGTGTTTCTGGTTCTCAGCATaGTTTTCCCAGGATACTGGAGTCCCAGGCTGCACTGAAGCCTGT	+
Preference number: 6 (lower is better) Translates to: EICDCGTKECFWFSA*FSQDTGVPGCTEAC Trigger: ACAGGCTTCAGTGCAGCCTGGGACTCCAGTATCCTGGGAAAACAATGCTGAGAACCAGAAACACTCCTTAGTACCACAATCACAGATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CAA 90 bp	CATCTTTGGGTTCTACATTTAACTTCCTCGTCAGGACTTGGCCATTaGGTAAGAGGCCTGCTGAAGCTGCTCCCCAGGACTTTAGAGAAA	+
Preference number: 6 (lower is better) Translates to: HLWVLHLTSSSGLGH*VRGLLKLLPRTLEK Trigger: TTTCTCTAAAGTCCTGGGGAGCAGCTTCAGCAGGCCTCTTACCAAATGGCCAAGTCCTGACGAGGAAGTTAAATGTAGAACCCAAAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS TCA 72 bp	AGGCTGACACCAAGACCTCCTCATTCTTCATCAGGTTaGCATACAGTGGTACATTCACAGCCAGCTTTAGCA	+
Preference number: 6 (lower is better) Translates to: RLTPRPPHSSSG*HTVVHSQPALA Trigger: TGCTAAAGCTGGCTGTGAATGTACCACTGTATGTCAACCTGATGAAGAATGAGGAGGTCTTGGTGTCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 72 bp	GTCCTGCAGTTTTTCTTTCCTCAATACTGGATCCTTTaGAAGGGCAGAAGAAGAGTCTATAGGCTGAGGCAG	+
Preference number: 6 (lower is better) Translates to: VLQFFFPQYWIL*KGRRRVYRLRQ Trigger: CTGCCTCAGCCTATAGACTCTTCTTCTGCCCTTCCAAAGGATCCAGTATTGAGGAAAGAAAAACTGCAGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 72 bp	AGAGGTGCATTAACATTAAACACTGTCTGCATGGCCTaGAAAGGTGCTGTGCTAATGGCTTCTGAACTCCCA	+
Preference number: 6 (lower is better) Translates to: RGALTLNTVCMA*KGAVLMASELP Trigger: TGGGAGTTCAGAAGCCATTAGCACAGCACCTTTTCAGGCCATGCAGACAGTGTTTAATGTTAATGCACCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 72 bp	CAAGGACTCTTTCTTCTTCTCCTGACCATCTGGCTCTaGAAGTGTATTCCAGCATTTGAGGAGACTTGGTTT	+
Preference number: 6 (lower is better) Translates to: QGLFLLLLTIWL*KCIPAFEETWF Trigger: AAACCAAGTCTCCTCAAATGCTGGAATACACTTCCAGAGCCAGATGGTCAGGAGAAGAAGAAAGAGTCCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS CAA 72 bp	GACAAGCTGAAGGCGGCTGTGATGATGGAATTGCACTaGAGGGTTTGTCAAAATCTAGAACAGACTCTTGCA	+
Preference number: 6 (lower is better) Translates to: DKLKAAVMMELH*RVCQNLEQTLA Trigger: TGCAAGAGTCTGTTCTAGATTTTGACAAACCCTCAAGTGCAATTCCATCATCACAGCCGCCTTCAGCTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CAA 72 bp	AGACTGGACAAGCTGAAGGCGGCTGTGATGATGGAATaGCACTTGAGGGTTTGTCAAAATCTAGAACAGACT	+
Preference number: 6 (lower is better) Translates to: RLDKLKAAVMME*HLRVCQNLEQT Trigger: AGTCTGTTCTAGATTTTGACAAACCCTCAAGTGCAATTCCATCATCACAGCCGCCTTCAGCTTGTCCAGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS TCA 72 bp	TTCACTACCTTCCAAAAGGTCCCAAAAGTACAAGGATaGCTGCTCCATCTGGTCTTCAACACTCAGACTTTC	+
Preference number: 6 (lower is better) Translates to: FTTFQKVPKVQG*LLHLVFNTQTF Trigger: GAAAGTCTGAGTGTTGAAGACCAGATGGAGCAGTCATCCTTGTACTTTTGGGACCTTTTGGAAGGTAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 72 bp	CCCAAGTTGTTCAGGAGAAGATCAAACACAATAGGTTaGTCTAAAGTTCCAGGAGCCAGATTGGATGTTCTG	+
Preference number: 6 (lower is better) Translates to: PKLFRRRSNTIG*SKVPGARLDVL Trigger: CAGAACATCCAATCTGGCTCCTGGAACTTTAGACCAACCTATTGTGTTTGATCTTCTCCTGAACAACTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CCA 72 bp	GTTGTCTGGTCTATGTGTACAGCTGGGAGCTGGCATTaGGATACTGTCTGTGTACTTGATGAAGTAAAATTT	+
Preference number: 6 (lower is better) Translates to: VVWSMCTAGSWH*DTVCVLDEVKF Trigger: AAATTTTACTTCATCAAGTACACAGACAGTATCCCAATGCCAGCTCCCAGCTGTACACATAGACCAGACAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9 ENSMUST00000127941.8
CDS TCA 72 bp	AGAATTCCTGAGAACTGGGACACTTTCAAAATAACCTaGGTGCAGCAATTTAGACAGCAGGTCTTTCACATG	+
Preference number: 6 (lower is better) Translates to: RIPENWDTFKIT*VQQFRQQVFHM Trigger: CATGTGAAAGACCTGCTGTCTAAATTGCTGCACTCAGGTTATTTTGAAAGTGTCCCAGTTCTCAGGAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 72 bp	TTCTTTCATTTCTTGTTCTTTCCGTGGAGGCAGAGGTaGATTAACATTAAACACTGTCTGCATGGCCTGAAA	+
Preference number: 6 (lower is better) Translates to: FFHFLFFPWRQR*INIKHCLHGLK Trigger: TTTCAGGCCATGCAGACAGTGTTTAATGTTAATGCACCTCTGCCTCCACGGAAAGAACAAGAAATGAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS CAA 72 bp	GAAGGCGGCTGTGATGATGGAATTGCACTTGAGGGTTaGTCAAAATCTAGAACAGACTCTTGCATAAAGTTA	+
Preference number: 6 (lower is better) Translates to: EGGCDDGIALEG*SKSRTDSCIKL Trigger: TAACTTTATGCAAGAGTCTGTTCTAGATTTTGACAAACCCTCAAGTGCAATTCCATCATCACAGCCGCCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9
CDS GCA 72 bp	CCAGCATTTGAGGAGACTTGGTTTCCTAGCATAATCTaGTTCCCAGGATTGTTCTACATTTTCTTGTTTTCT	+
Preference number: 6 (lower is better) Translates to: PAFEETWFPSII*FPGLFYIFLFS Trigger: AGAAAACAAGAAAATGTAGAACAATCCTGGGAAGCAGATTATGCTAGGAAACCAAGTCTCCTCAAATGCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111569.9
CDS TCA 72 bp	TTGAAGGCAAATACATTGCACCATTCAAGCCCCCTTTaGAGTCTTTTTGTACATGTTCTTGTGTCAAATTCT	+
Preference number: 6 (lower is better) Translates to: LKANTLHHSSPL*SLFVHVLVSNS Trigger: AGAATTTGACACAAGAACATGTACAAAAAGACTTCAAAGGGGGCTTGAATGGTGCAATGTATTTGCCTTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072324.12 ENSMUST00000111569.9

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