Pregenerated sensors for CAPNS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001794Ensembl transcript IDs: ENSMUST00000001845.13, ENSMUST00000108196.8, ENSMUST00000126116.3
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTAGCTTGTCTCAGAGCCAGGGGTAACTCAGGGTGCAGCAAGGTGTaGCATGTTGAGCTCTGGCTGCTGATTGGGAAGCTGGGTACCAGA | + |
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Preference number: 1 (lower is better) Translates to: LACLRARGNSGCSKV*HVELWLLIGKLGTR Trigger: TCTGGTACCCAGCTTCCCAATCAGCAGCCAGAGCTCAACATGCCACACCTTGCTGCACCCTGAGTTACCCCTGGCTCTGAGACAAGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGTGTGCTAGGGTGGGGTaGCCCTTCAGTAGAACAAGC | + |
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Preference number: 2 (lower is better) Translates to: LLGPTAVQGEHRAGVGTRCARVG*PFSRTS Trigger: GCTTGTTCTACTGAAGGGTCACCCCACCCTAGCACA...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGTGGCATGTTGAGCTCTaGCTGCTGATTGGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LLGPTAVQGEHRAGVGTRWHVEL*LLIGKL Trigger: CAGCTTCCCAATCAGCAGCCAGAGCTCAACATGCCA...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGTGGGCCCGACCGCTGTaGAGGGGGAGCACAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: RAHVPSCLDSALRVRRKQWARPL*RGSTEQ Trigger: CTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCA...CTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGGGACCTGCCATGGCCTaGAGTTCATCTGGCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SRESLFSPGPDRCAGGAQGPAMA*SSSGCL Trigger: CAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCC...CTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGAGTGTGTTGAGCTCTGGCTGCTaGTTGGGAAGCTGGGTACCA | + |
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Preference number: 2 (lower is better) Translates to: PAMAWSSSGCLGGNCVSVLSSGC*LGSWVP Trigger: TGGTACCCAGCTTCCCAATCAGCAGCCAGAGCTCAA...CACACTCACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR TCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGTGTGCTAGGGTGGGGTaGCCCTTCAGTAGAACAAGC | + |
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Preference number: 2 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVCARVG*PFSRTS Trigger: GCTTGTTCTACTGAAGGGTCACCCCACCCTAGCACA...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | ACTAGGGTGTGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTTGGCATGTTGAGCTCTaGCTGCTGATTGGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: TRVCGPAMAWSSSGCLGGWHVEL*LLIGKL Trigger: CAGCTTCCCAATCAGCAGCCAGAGCTCAACATGCCA...ACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACACACCCTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGGGGTGCAGCAAGGTGTaGCATGTTGAGCTCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: QQVERVYFLLGPTAVQGEGCSKV*HVELWL Trigger: CAGCCAGAGCTCAACATGCCACACCTTGCTGCACCC...CTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGCTAAGACAGGGCCCTTaGGACATGGAAGCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVLRQGP*DMEAAG Trigger: TCCTGCTGCTTCCATGTCCCAAGGGCCCTGTCTTAG...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR GCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGAGGGGTAACTCAGGGTaGAGCAAGGTGTGGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVRGNSG*SKVWHV Trigger: AACATGCCACACCTTGCTGCACCCTGAGTTACCCCT...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGTTGGGTGTGCTAGGGTaGGGTGACCCTTCAGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVLGVLG*GDPSVE Trigger: TTCTACTGAAGGGTCACCCCACCCTAGCACACCCAA...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCTAAGACAGGGCCCTTaGGACATGGAAGCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: QQVERVYFLLGPTAVQGELRQGP*DMEAAG Trigger: TCCTGCTGCTTCCATGTCCCAAGGGCCCTGTCTTAG...CTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGGACCTGCCATGGCCTaGAGTTCATCTGGCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VRRKQQVERVYFLLGPTAGPAMA*SSSGCL Trigger: CAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCC...AGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR GCA 90 bp | AGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGCAAGGGGTAACTCAGGGTaGAGCAAGGTGTGGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: SSCSLLPGLSTQSPKEAARGNSG*SKVWHV Trigger: AACATGCCACACCTTGCTGCACCCTGAGTTACCCCT...TGCTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | AGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGTTGGGTGTGCTAGGGTaGGGTGACCCTTCAGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: SRESLFSPGPDRCAGGAQLGVLG*GDPSVE Trigger: TTCTACTGAAGGGTCACCCCACCCTAGCACACCCAA...CTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | ACTAGGGTGTGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTGATGAAGGTAACAGATaGCGTGGATTGGGTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: TRVCGPAMAWSSSGCLGGDEGNR*RGLGVL Trigger: TAGCACACCCAATCCACGCCATCTGTTACCTTCATC...ACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACACACCCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGACCTGCCATGGCCTaGAGTTCATCTGGCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KEAASRESLFSPGPDRCAGPAMA*SSSGCL Trigger: CAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCC...TGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR TCA 90 bp | AGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGCATGGGAGGTAACTGTGTaGGTGTGTAACAGGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: SSCSLLPGLSTQSPKEAAWEVTV*VCNRVC Trigger: ACACACCCTGTTACACACTCACACAGTTACCTCCCA...TGCTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | GTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGCTCTGGCTGCTGATTaGGAAGCTGGGTACCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: VRRKQQVERVYFLLGPTAALAAD*EAGYQN Trigger: GTTCTGGTACCCAGCTTCCCAATCAGCAGCCAGAGC...AGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR GCA 90 bp | CAGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACAGGGGTAACTCAGGGTaGAGCAAGGTGTGGCATGTT | + |
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Preference number: 2 (lower is better) Translates to: QSPKEAASRESLFSPGPDRGNSG*SKVWHV Trigger: AACATGCCACACCTTGCTGCACCCTGAGTTACCCCT...GTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCTGGCATGTTGAGCTCTaGCTGCTGATTGGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RVRRKQQVERVYFLLGPTWHVEL*LLIGKL Trigger: CAGCTTCCCAATCAGCAGCCAGAGCTCAACATGCCA...GGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCACTCAGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTTTGAGCTCTGGCTGCTaGTTGGGAAGCTGGGTACCA | + |
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Preference number: 2 (lower is better) Translates to: LSTQSPKEAASRESLFSPLSSGC*LGSWVP Trigger: TGGTACCCAGCTTCCCAATCAGCAGCCAGAGCTCAA...AGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCTGAGTGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACGATGAAGGTAACAGATaGCGTGGATTGGGTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: QSPKEAASRESLFSPGPDDEGNR*RGLGVL Trigger: TAGCACACCCAATCCACGCCATCTGTTACCTTCATC...GTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCACTCAGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTCTAAGACAGGGCCCTTaGGACATGGAAGCAGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LSTQSPKEAASRESLFSPLRQGP*DMEAAG Trigger: TCCTGCTGCTTCCATGTCCCAAGGGCCCTGTCTTAG...AGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCTGAGTGCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCACTCAGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTTTGGGTGTGCTAGGGTaGGGTGACCCTTCAGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: LSTQSPKEAASRESLFSPLGVLG*GDPSVE Trigger: TTCTACTGAAGGGTCACCCCACCCTAGCACACCCAA...AGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCTGAGTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCACTCAGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGATGAAGGTAACAGATaGCGTGGATTGGGTGTGCTA | + |
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Preference number: 2 (lower is better) Translates to: LSTQSPKEAASRESLFSPDEGNR*RGLGVL Trigger: TAGCACACCCAATCCACGCCATCTGTTACCTTCATC...AGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCTGAGTGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGACTAAGACAGGGCCCTaGGGACATGGAAGCAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LLGPTAVQGEHRAGVGTRTKTGP*GHGSSR Trigger: CCTGCTGCTTCCATGTCCCAAGGGCCCTGTCTTAGT...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR GCA 72 bp | AAGCTAGCTTGTCTCAGAGCCAGGGGTAACTCAGGGTaGAGCAAGGTGTGGCATGTTGAGCTCTGGCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: KLACLRARGNSG*SKVWHVELWLL Trigger: CAGCAGCCAGAGCTCAACATGCCACACCTTGCTGCACCCTGAGTTACCCCTGGCTCTGAGACAAGCTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR CCA 72 bp | AACTCAGGGTGCAGCAAGGTGTGGCATGTTGAGCTCTaGCTGCTGATTGGGAAGCTGGGTACCAGAACAGGG | + |
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Preference number: 3 (lower is better) Translates to: NSGCSKVWHVEL*LLIGKLGTRTG Trigger: CCCTGTTCTGGTACCCAGCTTCCCAATCAGCAGCCAGAGCTCAACATGCCACACCTTGCTGCACCCTGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR TCA 72 bp | CCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTaGGTGTGTAACAGGGTGTGTAGGGACAGGTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: PGVHLAAWEVTV*VCNRVCRDRCD Trigger: ATCACACCTGTCCCTACACACCCTGTTACACACTCACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| 3UTR CCA 72 bp | GAAGGTAACAGATGGCGTGGATTGGGTGTGCTAGGGTaGGGTGACCCTTCAGTAGAACAAGCTAGCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: EGNRWRGLGVLG*GDPSVEQASLS Trigger: AGACAAGCTAGCTTGTTCTACTGAAGGGTCACCCCACCCTAGCACACCCAATCCACGCCATCTGTTACCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGCTCCTCCCAGTCCCATaGCTCCACCGCCACCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LLGPTAVQGEHRAGVGTRLLPVP*LHRHRR Trigger: GCGGCGGTGGCGGTGGAGGCATGGGACTGGGAGGAG...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| CDS-3UTR GCA 90 bp | ATCAGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCCTCCTCCCAGTCCCATaGCTCCACCGCCACCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: IRVQGGSIVSCEGAGLPLLLPVP*LHRHRR Trigger: GCGGCGGTGGCGGTGGAGGCATGGGACTGGGAGGAG...GAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCTGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGATTCAGGTGGAATCCTaGTGCCTCAAAGGCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LLGPTAVQGEHRAGVGTRIQVES*CLKGPW Trigger: CCAGGGGCCTTTGAGGCAGCAGGATTCCACCTGAAT...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR GCA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGGAATACATAGTCAGCTaGAGCCACTCCTGGATGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLGPTAVQGEHRAGVGTREYIVS*SHSWMF Trigger: GAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR CCA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGAGATGCTCATTCAGGTaGAATCCTGCTGCCTCAAAG | + |
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Preference number: 4 (lower is better) Translates to: LLGPTAVQGEHRAGVGTRRCSFR*NPAASK Trigger: CTTTGAGGCAGCAGGATTCCACCTGAATGAGCATCT...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR CCA 90 bp | AGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCCCAGGAGTAATGACTACGTaGAGGCGGAGGCTCCGGGTT | + |
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Preference number: 4 (lower is better) Translates to: RVQGGSIVSCEGAGLPLPGVMTT*RRRLRV Trigger: AACCCGGAGCCTCCGCCTCCACGTAGTCATTACTCC...TGGGAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR TCA 90 bp | CAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGTGGTGTCGCTATCCATaGCGGCCACCATGCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: QQVERVYFLLGPTAVQGEWCRYP*RPPCSD Trigger: GTCGGAGCATGGTGGCCGTCATGGATAGCGACACCA...CTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR TCA 90 bp | AGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGTGGTGTCGCTATCCATaGCGGCCACCATGCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: SRESLFSPGPDRCAGGAQWCRYP*RPPCSD Trigger: GTCGGAGCATGGTGGCCGTCATGGATAGCGACACCA...CTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR GCA 90 bp | ACGAAAGGCCTCTGGGTAGCAGGACATGACCATGAAAATGCGGCTGCAGTCAGGGGCTCCGGGTTGTACTaGGCAGCAGCCTCGCTGATG | + |
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Preference number: 4 (lower is better) Translates to: TKGLWVAGHDHENAAAVRGSGLY*AAASLM Trigger: CATCAGCGAGGCTGCTGCGCAGTACAACCCGGAGCC...CCTGACTGCAGCCGCATTTTCATGGTCATGTCCTGCTACCCAGAGGCCTTTCGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| CDS-3UTR GCA 90 bp | AGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCCCAATTCAGGTGGAATCCTaGTGCCTCAAAGGCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RVQGGSIVSCEGAGLPLPIQVES*CLKGPW Trigger: CCAGGGGCCTTTGAGGCAGCAGGATTCCACCTGAAT...TGGGAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR CCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGGGAGTAATGACTACGTaGAGGCGGAGGCTCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVGVMTT*RRRLRV Trigger: AACCCGGAGCCTCCGCCTCCACGTAGTCATTACTCC...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | GTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGGCTCCGGGTTGTACTaGGCAGCAGCCTCGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: VRRKQQVERVYFLLGPTAGSGLY*AAASLM Trigger: CATCAGCGAGGCTGCTGCGCAGTACAACCCGGAGCC...AGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGGTTCCCGCTCTCATCTaGGTAGCGCCGGATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVVPALI*VAPDDH Trigger: ATGATCATCCGGCGCTACGCAGATGAGAGCGGGAAC...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | ATCAGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCGTTCCCGCTCTCATCTaGGTAGCGCCGGATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRVQGGSIVSCEGAGLPLVPALI*VAPDDH Trigger: ATGATCATCCGGCGCTACGCAGATGAGAGCGGGAAC...GAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGGGAGTAATGACTACGTaGAGGCGGAGGCTCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QQVERVYFLLGPTAVQGEGVMTT*RRRLRV Trigger: AACCCGGAGCCTCCGCCTCCACGTAGTCATTACTCC...CTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGATTCAGGTGGAATCCTaGTGCCTCAAAGGCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAHVPSCLDSALRVRRKQIQVES*CLKGPW Trigger: CCAGGGGCCTTTGAGGCAGCAGGATTCCACCTGAAT...CTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | AGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGGTTCCCGCTCTCATCTaGGTAGCGCCGGATGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRESLFSPGPDRCAGGAQVPALI*VAPDDH Trigger: ATGATCATCCGGCGCTACGCAGATGAGAGCGGGAAC...CTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | ATCAGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCTGCCTCAAAGGCCCCTaGAAGTTCATGGCTACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: IRVQGGSIVSCEGAGLPLCLKGP*KFMATD Trigger: ATCGGTAGCCATGAACTTCCAGGGGCCTTTGAGGCA...GAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | AGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCCCAAGCTGCAGCCACTCCTaGATGTTCACTTGGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RVQGGSIVSCEGAGLPLPSCSHS*MFTWIC Trigger: ACAGATCCAAGTGAACATCCAGGAGTGGCTGCAGCT...TGGGAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | ACTAGGGTGTGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTGAATACATAGTCAGCTaGAGCCACTCCTGGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRVCGPAMAWSSSGCLGGEYIVS*SHSWMF Trigger: GAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC...ACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACACACCCTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGTGCCTCAAAGGCCCCTaGAAGTTCATGGCTACCGAT | + |
|
Preference number: 4 (lower is better) Translates to: RAHVPSCLDSALRVRRKQCLKGP*KFMATD Trigger: ATCGGTAGCCATGAACTTCCAGGGGCCTTTGAGGCA...CTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGAGCTGCAGCCACTCCTaGATGTTCACTTGGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVSCSHS*MFTWIC Trigger: ACAGATCCAAGTGAACATCCAGGAGTGGCTGCAGCT...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGTCGTCTCCAGCCAGCTaGACAAAAAGTTTCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVSSPAS*TKSFLN Trigger: GTTCAGGAAACTTTTTGTCCAGCTGGCTGGAGACGA...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | CCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGAGTGTGTCCTGGATGTTCACTTaGATCTGTCCGGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PAMAWSSSGCLGGNCVSVSWMFT*ICPVPF Trigger: AAATGGCACCGGACAGATCCAAGTGAACATCCAGGA...CACACTCACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGAGCTGCAGCCACTCCTaGATGTTCACTTGGATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQVERVYFLLGPTAVQGESCSHS*MFTWIC Trigger: ACAGATCCAAGTGAACATCCAGGAGTGGCTGCAGCT...CTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | AGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGCATCGTCTCCAGCCAGCTaGACAAAAAGTTTCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLLPGLSTQSPKEAASSPAS*TKSFLN Trigger: GTTCAGGAAACTTTTTGTCCAGCTGGCTGGAGACGA...TGCTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGAGATGCTCATTCAGGTaGAATCCTGCTGCCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RAHVPSCLDSALRVRRKQRCSFR*NPAASK Trigger: CTTTGAGGCAGCAGGATTCCACCTGAATGAGCATCT...CTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGTCCTGGATGTTCACTTaGATCTGTCCGGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: RAHVPSCLDSALRVRRKQSWMFT*ICPVPF Trigger: AAATGGCACCGGACAGATCCAAGTGAACATCCAGGA...CTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR TCA 90 bp | AGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGGGACAAAAAGTTTCCTaGACTGACGGACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRESLFSPGPDRCAGGAQGQKVS*TDGLLH Trigger: GTGAAGAAGTCCGTCAGTTCAGGAAACTTTTTGTCC...CTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGGGACAAAAAGTTTCCTaGACTGACGGACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QQVERVYFLLGPTAVQGEGQKVS*TDGLLH Trigger: GTGAAGAAGTCCGTCAGTTCAGGAAACTTTTTGTCC...CTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCGTTGGCCTCAATATTaGAGTAATGACTACGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QQVERVYFLLGPTAVQGERWPQY*SNDYVE Trigger: CTCCACGTAGTCATTACTCCAATATTGAGGCCAACG...CTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | ACTAGGGTGTGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTCTTCTTCACTCTCGTTaGCCTCAATATTGGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRVCGPAMAWSSSGCLGGLLHSR*PQYWSN Trigger: ATTACTCCAATATTGAGGCCAACGAGAGTGAAGAAG...ACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACACACCCTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | ACGAAAGGCCTCTGGGTAGCAGGACATGACCATGAAAATGCGGCTGCAGTCAGGAGATGCTCATTCAGGTaGAATCCTGCTGCCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TKGLWVAGHDHENAAAVRRCSFR*NPAASK Trigger: CTTTGAGGCAGCAGGATTCCACCTGAATGAGCATCT...CCTGACTGCAGCCGCATTTTCATGGTCATGTCCTGCTACCCAGAGGCCTTTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | ACGAAAGGCCTCTGGGTAGCAGGACATGACCATGAAAATGCGGCTGCAGTCAGGTCCTGGATGTTCACTTaGATCTGTCCGGTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TKGLWVAGHDHENAAAVRSWMFT*ICPVPF Trigger: AAATGGCACCGGACAGATCCAAGTGAACATCCAGGA...CCTGACTGCAGCCGCATTTTCATGGTCATGTCCTGCTACCCAGAGGCCTTTCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR GCA 90 bp | ATCAGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCTCCGACAAGTGTCAATaGCAAAACCATCAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IRVQGGSIVSCEGAGLPLSDKCQ*QNHQFS Trigger: TGAAAACTGATGGTTTTGGCATTGACACTTGTCGGA...GAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | AGAGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGCTTGGATCTGTCCGGTaGCATTTTTGTCAAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RAHVPSCLDSALRVRRKQLGSVR*HFCQEI Trigger: AATCTCTTGACAAAAATGGCACCGGACAGATCCAAG...CTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | AGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGCACTTGGATCTGTCCGGTaGCATTTTTGTCAAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: SSCSLLPGLSTQSPKEAALGSVR*HFCQEI Trigger: AATCTCTTGACAAAAATGGCACCGGACAGATCCAAG...TGCTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | ACGAAAGGCCTCTGGGTAGCAGGACATGACCATGAAAATGCGGCTGCAGTCAGGCGTTGGCCTCAATATTaGAGTAATGACTACGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TKGLWVAGHDHENAAAVRRWPQY*SNDYVE Trigger: CTCCACGTAGTCATTACTCCAATATTGAGGCCAACG...CCTGACTGCAGCCGCATTTTCATGGTCATGTCCTGCTACCCAGAGGCCTTTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | ATCAGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCCTTCTTCACTCTCGTTaGCCTCAATATTGGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: IRVQGGSIVSCEGAGLPLLLHSR*PQYWSN Trigger: ATTACTCCAATATTGAGGCCAACGAGAGTGAAGAAG...GAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR TCA 90 bp | GTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGGACAAAAAGTTTCCTaGACTGACGGACTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VRRKQQVERVYFLLGPTAGQKVS*TDGLLH Trigger: GTGAAGAAGTCCGTCAGTTCAGGAAACTTTTTGTCC...AGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | AGGGAGACGAAAGGCCTCTGGGTAGCAGGACATGACCATGAAAATGCGGCTGCACTTGGATCTGTCCGGTaGCATTTTTGTCAAGAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RETKGLWVAGHDHENAAALGSVR*HFCQEI Trigger: AATCTCTTGACAAAAATGGCACCGGACAGATCCAAG...TGCAGCCGCATTTTCATGGTCATGTCCTGCTACCCAGAGGCCTTTCGTCTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | AGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGAATACATAGTCAGCTaGAGCCACTCCTGGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVRRKQQVERVYFLLGPTEYIVS*SHSWMF Trigger: GAACATCCAGGAGTGGCTGCAGCTGACTATGTATTC...GGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | TGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGCGTTTGTATATAGCCTaGCACTTTTTAATGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGPAMAWSSSGCLGGNCVRLYIA*HFLMLF Trigger: GAACAACATTAAAAAGTGGCAGGCTATATACAAACG...CACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | CATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGCAAGTACTTCTTCACTCTCGTTaGCCTCAATATTGGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: HVPSCLDSALRVRRKQQVLLHSR*PQYWSN Trigger: ATTACTCCAATATTGAGGCCAACGAGAGTGAAGAAG...TACTTGCTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR CCA 90 bp | CTCAGCACTCAGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTTCGTCTCCAGCCAGCTaGACAAAAAGTTTCCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LSTQSPKEAASRESLFSPSSPAS*TKSFLN Trigger: GTTCAGGAAACTTTTTGTCCAGCTGGCTGGAGACGA...AGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCTGAGTGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR GCA 90 bp | CTCAGCACTCAGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTCGTTTGTATATAGCCTaGCACTTTTTAATGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSTQSPKEAASRESLFSPRLYIA*HFLMLF Trigger: GAACAACATTAAAAAGTGGCAGGCTATATACAAACG...AGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCTGAGTGCTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGGGCGGAGGCTCCGGGTaGTACTGCGCAGCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLGPTAVQGEHRAGVGTRGGGSG*YCAAAS Trigger: CGAGGCTGCTGCGCAGTACAACCCGGAGCCTCCGCC...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CAA 90 bp | ACTAGGGTGTGTGGACCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTGGCGGAGGCTCCGGGTaGTACTGCGCAGCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TRVCGPAMAWSSSGCLGGGGGSG*YCAAAS Trigger: CGAGGCTGCTGCGCAGTACAACCCGGAGCCTCCGCC...ACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGGTCCACACACCCTAGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CAA 90 bp | CCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGAGTGTGGGCGGAGGCTCCGGGTaGTACTGCGCAGCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PAMAWSSSGCLGGNCVSVGGGSG*YCAAAS Trigger: CGAGGCTGCTGCGCAGTACAACCCGGAGCCTCCGCC...CACACTCACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CAA 90 bp | AGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGTCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: SRESLFSPGPDRCAGGAQSSKPS*PVVSLS Trigger: GGATAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...CTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CAA 90 bp | AGGGTTCAAGGTGGCTCCATAGTGAGCTGTGAGGGGGCAGGTCTGCCACTCCCACTCCTGGATGTTCACTaGGATCTGTCCGGTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RVQGGSIVSCEGAGLPLPLLDVH*DLSGAI Trigger: AATGGCACCGGACAGATCCAAGTGAACATCCAGGAG...TGGGAGTGGCAGACCTGCCCCCTCACAGCTCACTATGGAGCCACCTTGAACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CAA 90 bp | AGGGAGACGAAAGGCCTCTGGGTAGCAGGACATGACCATGAAAATGCGGCTGCATCCTCAAAGCCCAGCTaGCCTGTGGTGTCGCTATCC | + |
|
Preference number: 5 (lower is better) Translates to: RETKGLWVAGHDHENAAASSKPS*PVVSLS Trigger: GGATAGCGACACCACAGGCAAGCTGGGCTTTGAGGA...TGCAGCCGCATTTTCATGGTCATGTCCTGCTACCCAGAGGCCTTTCGTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGAGCAGGCGTAGGCACTAGGTGCCACTTTTTAATGTaGTTCCAGAGGTATTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: LLGPTAVQGEHRAGVGTRCHFLM*FQRYLN Trigger: GTTCAAATACCTCTGGAACAACATTAAAAAGTGGCA...CCTAGTGCCTACGCCTGCTCTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR CAA 90 bp | AGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCAGGGGGAGCACAGCTCCTGGATGTTCACTaGGATCTGTCCGGTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: SRESLFSPGPDRCAGGAQLLDVH*DLSGAI Trigger: AATGGCACCGGACAGATCCAAGTGAACATCCAGGAG...CTGTGCTCCCCCTGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR CAA 90 bp | CCTGCCATGGCCTGGAGTTCATCTGGCTGCCTGGGAGGTAACTGTGTGAGTGTGTTGTTCCAGAGGTATTaGAACTCCTCAAAGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PAMAWSSSGCLGGNCVSVLFQRY*NSSKPS Trigger: GCTGGGCTTTGAGGAGTTCAAATACCTCTGGAACAA...CACACTCACACAGTTACCTCCCAGGCAGCCAGATGAACTCCAGGCCATGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR CAA 90 bp | AGGGAGACGAAAGGCCTCTGGGTAGCAGGACATGACCATGAAAATGCGGCTGCACTCCTGGATGTTCACTaGGATCTGTCCGGTGCCATT | + |
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Preference number: 5 (lower is better) Translates to: RETKGLWVAGHDHENAAALLDVH*DLSGAI Trigger: AATGGCACCGGACAGATCCAAGTGAACATCCAGGAG...TGCAGCCGCATTTTCATGGTCATGTCCTGCTACCCAGAGGCCTTTCGTCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS-3UTR CAA 90 bp | GTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTTTGTTCCAGAGGTATTaGAACTCCTCAAAGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: VRRKQQVERVYFLLGPTALFQRY*NSSKPS Trigger: GCTGGGCTTTGAGGAGTTCAAATACCTCTGGAACAA...AGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| CDS-3UTR CAA 90 bp | AAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCGCTGTGCATTGTTCCAGAGGTATTaGAACTCCTCAAAGCCCAGC | + |
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Preference number: 5 (lower is better) Translates to: KEAASRESLFSPGPDRCALFQRY*NSSKPS Trigger: GCTGGGCTTTGAGGAGTTCAAATACCTCTGGAACAA...TGCACAGCGGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| CDS-3UTR CAA 90 bp | AGAGCTCATGTTCCCTCCTGCCTGGACTCAGCACTCAGAGTCCGAAGGAAGCAGTGCCACTTTTTAATGTaGTTCCAGAGGTATTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: RAHVPSCLDSALRVRRKQCHFLM*FQRYLN Trigger: GTTCAAATACCTCTGGAACAACATTAAAAAGTGGCA...CTGCTTCCTTCGGACTCTGAGTGCTGAGTCCAGGCAGGAGGGAACATGAGCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| CDS-3UTR CAA 90 bp | AGAGTCCGAAGGAAGCAGCAAGTAGAGAGAGTTTATTTTCTCCTGGGCCCGACCTGCCACTTTTTAATGTaGTTCCAGAGGTATTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: RVRRKQQVERVYFLLGPTCHFLM*FQRYLN Trigger: GTTCAAATACCTCTGGAACAACATTAAAAAGTGGCA...GGTCGGGCCCAGGAGAAAATAAACTCTCTCTACTTGCTGCTTCCTTCGGACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001845.13 ENSMUST00000126116.3 |
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| CDS CCA 72 bp | ACTGACGGACTTCTTCACTCTCGTTGGCCTCAATATTaGAGTAATGACTACGTGGAGGCGGAGGCTCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: TDGLLHSRWPQY*SNDYVEAEAPG Trigger: ACCCGGAGCCTCCGCCTCCACGTAGTCATTACTCCAATATTGAGGCCAACGAGAGTGAAGAAGTCCGTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS TCA 72 bp | TCGTCTCCAGCCAGCTGGACAAAAAGTTTCCTGAACTaGCGGACTTCTTCACTCTCGTTGGCCTCAATATTG | + |
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Preference number: 6 (lower is better) Translates to: SSPASWTKSFLN*RTSSLSLASIL Trigger: CAATATTGAGGCCAACGAGAGTGAAGAAGTCCGTCAGTTCAGGAAACTTTTTGTCCAGCTGGCTGGAGACGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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| CDS CAA 72 bp | TCCTGGATGTTCACTTGGATCTGTCCGGTGCCATTTTaGTCAAGAGATTTGAAAGCGCGGAACATGGCATCT | + |
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Preference number: 6 (lower is better) Translates to: SWMFTWICPVPF*SRDLKARNMAS Trigger: AGATGCCATGTTCCGCGCTTTCAAATCTCTTGACAAAAATGGCACCGGACAGATCCAAGTGAACATCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001845.13 ENSMUST00000108196.8 ENSMUST00000126116.3 |
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