Pregenerated sensors for CAPN9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031981Ensembl transcript IDs: ENSMUST00000093033.6, ENSMUST00000133086.2
Found 110 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGAGGAGAGAGAGCAGTaGGCGGGGCAGCCCTCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGEEREQ*AGQPSK Trigger: TTTAGAGGGCTGCCCCGCCCACTGCTCTCTCTCCTC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGGTCACCTCCCACCTGTaGAGGGCGCTGTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGVTSHL*RALSSR Trigger: CCTGGAGGACAGCGCCCTCCACAGGTGGGAGGTGAC...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGAAAGTGCAGCCCTCCTaGCCCTCGTCCCTCTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGKVQPS*PSSLSV Trigger: GACCGAGAGGGACGAGGGCCAGGAGGGCTGCACTTT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGAGGCTGCTAGGAAAGTaGAGCCCTCCTGGCCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGRLLGK*SPPGPR Trigger: ACGAGGGCCAGGAGGGCTGCACTTTCCTAGCAGCCT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGTCATCAAGGGCAGTGTaGCCCAGGCGCTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGSSRAV*PRRFCS Trigger: GGAGCAGAAGCGCCTGGGCCACACTGCCCTTGATGA...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGAGGTGTCCAGGAAGTTaGGACAGCCACCAGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGRCPGS*DSHQQW Trigger: CCACTGCTGGTGGCTGTCGCAACTTCCTGGACACCT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGTTGGAACACCCGGCTTaGATTCTCCAGCCGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGLEHPA*ILQPHQ Trigger: CTGGTGCGGCTGGAGAATGCAAGCCGGGTGTTCCAA...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGCTCAAAGCTCTGACCTaGGGAGTGGATAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGLKALT*GVDSPG Trigger: GCCAGGACTATCCACTCCTCAGGTCAGAGCTTTGAG...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGCCAGAACCAAATCCTTaGTCCTGGGGAACCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGPEPNP*SWGTTL Trigger: CAGGGTGGTTCCCCAGGACCAAGGATTTGGTTCTGG...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGGGGAGGCATGGTACCTaGAAAAGTCCCTACTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGGRHGT*KSPYSG Trigger: ACCTGAGTAGGGACTTTTTCAGGTACCATGCCTCCC...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGTGGCTTCAATGGCACTaGCTCCCTTCAGTGCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGWLQWH*LPSVPH Trigger: ATGAGGCACTGAAGGGAGGCAGTGCCATTGAAGCCA...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGACTCCAGCTTCCCGTTaGCACTGGTATCCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGTPASR*HWYPSE Trigger: CTCTGATGGATACCAGTGGCAACGGGAAGCTGGAGT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGTCAGTGCTTTCTGATTaGGGGTTAGGGAGGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGSVLSD*GLGRQW Trigger: CCATTGCCTCCCTAACCCTCAATCAGAAAGCACTGA...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGAGAACAGGGAGACATTaGTGGCAGGGAAGTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGRTGRH*WQGSQH Trigger: ATGCTGACTTCCCTGCCAGCAATGTCTCCCTGTTCT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGACTGCCTCCCTTCAGTaGCTCATAACTCCCGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGTASLQ*LITPVK Trigger: CTTAACGGGAGTTATGAGGCACTGAAGGGAGGCAGT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGCAGCTGGAATCGCTCTaGGACTTCTCTCAAGTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGQLESL*DFSQVD Trigger: ATCAACTTGAGAGAAGTCTCAGAGCGATTCCAGCTG...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGCATAGGAAGACATGGTaGCAGACTTGTCCACATCGA | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGHRKTW*QTCPHR Trigger: TCGATGTGGACAAGTCTGGCACCATGTCTTCCTATG...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTCCCGGGGACTGGCTGTaGCTGTGGCCTCAGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGPGDWL*LWPQGP Trigger: CGGTCCCTGAGGCCACAGCCACAGCCAGTCCCCGGG...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGAGGGCTGTTTTCTTCTaGAGAACAGCATTTAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGRAVFF*RTAFRT Trigger: TGTTCTAAATGCTGTTCTGCAGAAGAAAACAGCCCT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGTCGTTTATGTTGAGATaGATGAAGTCCTTGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WRGEEGGVRPGGERAVGGSFMLR*MKSLFF Trigger: GAAGAACAAGGACTTCATCCATCTCAACATAAACGA...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTAGACCAGGCGGTCCTTaGAGGTGGGCAGGCGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGRPGGP*RWAGGH Trigger: ATGACCGCCTGCCCACCTTCAAGGACCGCCTGGTCT...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGACTGGCTGTGGCTGTaGCCTCAGGGACCGATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGDWLWL*PQGPMQ Trigger: CTGCATCGGTCCCTGAGGCCACAGCCACAGCCAGTC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGACTGCAGGCAGCCCTaGCTCAGCTGCTCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGDCRQP*LSCSKL Trigger: GAGCTTTGAGCAGCTGAGGCAGGGCTGCCTGCAGTC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTAACAAGGTGCCAGACTaGAGGCAGCCCTGCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGNKVPD*RQPCLS Trigger: GCTGAGGCAGGGCTGCCTGCAGTCTGGCACCTTGTT...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTTTCAAGCTCCTCAGCTaGCACCTCCATGTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGFKLLS*HLHVLA Trigger: GGCGAGGACATGGAGGTGTCAGCTGAGGAGCTTGAA...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGCCTGCAGCTTTCAGTaGCGTCCGCAGCTCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGACSFQ*RPQLIG Trigger: TCCTATGAGCTGCGGACGGCACTGAAAGCTGCAGGC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTACCCAGCTGAAAGCCTaGAGCTTTCAGTGCCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGTQLKA*SFQCRP Trigger: CGGACGGCACTGAAAGCTGCAGGCTTTCAGCTGGGT...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTACCCAGCTTCCTTGGTaGATGGTCACCTCCCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGTQLPW*MVTSHL Trigger: CAGGTGGGAGGTGACCATCCACCAAGGAAGCTGGGT...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGCCGCACCAGGCAGTTaGGGTAGTCATCGAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGAAPGS*GSHRNP Trigger: TGGATTTCGATGACTACCTCAACTGCCTGGTGCGGC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTCATCCTCAAACAAGGTaGCAGACTGCAGGCAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGHPQTR*QTAGSP Trigger: AGGGCTGCCTGCAGTCTGGCACCTTGTTTGAGGATG...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGGTGCCTCTCGGATTTaGAAGTTCTCAGCCACACCC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGGASRI*KFSATP Trigger: GGGTGTGGCTGAGAACTTCCAAATCCGAGAGGCACC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTCGGGCCAGGGAGGCATaGTACCTGAAAAAGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGRAREA*YLKKSL Trigger: TAGGGACTTTTTCAGGTACCATGCCTCCCTGGCCCG...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTAGCTGCTCAAAGCTCTaGCCTGAGGAGTGGATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGSCSKL*PEEWIV Trigger: GACTATCCACTCCTCAGGTCAGAGCTTTGAGCAGCT...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTCCTTGTTCTTCACACTaGGAGATTGGAACACCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGPCSSH*EIGTPG Trigger: GCCGGGTGTTCCAATCTCTCAGTGTGAAGAACAAGG...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTCTTCCATGGCTTCAATaGCACTGCCTCCCTTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGLPWLQ*HCLPSV Trigger: CACTGAAGGGAGGCAGTGCCATTGAAGCCATGGAAG...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTTGTTTCCTCCTCCTGTaGAGTCGGCTTTGGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGCFLLL*SRLWKL Trigger: GAGCTTCCAAAGCCGACTCCACAGGAGGAGGAAACA...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTCTCCAGAACTCATTGTaGTCAGCAGAGTGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGLQNSL*SAEWRK Trigger: CTTCCTCCACTCTGCTGATCACAATGAGTTCTGGAG...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTTTCCACAATTTCCCCTaGCCGTTTCCACACAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGFHNFP*PFPHKG Trigger: CCCTTTGTGTGGAAACGGCCAGGGGAAATTGTGGAA...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGCTTTATCTGAGGGTTaGTCCAGAAGGTGTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGALSEG*SRRCPG Trigger: TCCTGGACACCTTCTGGACCAACCCTCAGATAAAGC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR GCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTCTTGAAGTCTTTGAATaGCATCCAGAACTCCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGLEVFE*HPELPV Trigger: GACGGGGAGTTCTGGATGGCATTCAAAGACTTCAAG...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGCTCATAGGAAGACATaGTGCCAGACTTGTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGAHRKT*CQTCPH Trigger: ATGTGGACAAGTCTGGCACCATGTCTTCCTATGAGC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTTCATCGAAATCCAGCTaGAGGTCCTCATCTGCATAC | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGSSKSS*RSSSAY Trigger: GTATGCAGATGAGGACCTCCAGCTGGATTTCGATGA...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTTGGCCCCTCCAAGAATaGATTCTGGTTTTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGWPLQE*ILVFPQ Trigger: TTGTGGAAAAACCAGAATTCATTCTTGGAGGGGCCA...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTTCGAGCTTCAGATTCTaGGGCATTCAGGGTATCTAT | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGSSFRF*GIQGIY Trigger: ATAGATACCCTGAATGCCTCAGAATCTGAAGCTCGA...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR TCA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTTATCCATCAGAGAGATaGTGTTTCTGCAGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGYPSER*CFCRTA Trigger: TGCTGTCCTGCAGAAACATCATCTCTCTGATGGATA...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGATTGGAACACCCGGCTaGCATTCTCCAGCCGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: WRGEEGGVRPGGERAVGGIGTPG*HSPAAP Trigger: TGGTGCGGCTGGAGAATGCAAGCCGGGTGTTCCAAT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGATCCAGTGTTTCAGCTaGTCCCAGAAGACCCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WRGEEGGVRPGGERAVGGIQCFS*SQKTRN Trigger: GTTCCGGGTCTTCTGGGACAAGCTGAAACACTGGAT...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 90 bp | GGTTGGTCCAGAAGGTGTCCAGGAAGTTGCGACAGCCACCAGCAGTaGAGCCACGGACCCAGCTTCCTTGGTGGATGGTCACCTCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GWSRRCPGSCDSHQQ*SHGPSFLGGWSPPT Trigger: GGTGGGAGGTGACCATCCACCAAGGAAGCTGGGTCCGTGGCTCCACTGCTGGTGGCTGTCGCAACTTCCTGGACACCTTCTGGACCAACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGCTTCACACTGAGAGATaGGAACACCCGGCTTGCATT | + |
|
Preference number: 5 (lower is better) Translates to: WRGEEGGVRPGGERAVGGLHTER*EHPACI Trigger: AATGCAAGCCGGGTGTTCCAATCTCTCAGTGTGAAG...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS TCA 90 bp | CAGCCCTCCTGGCCCTCGTCCCTCTCGGTCAGGGACAGCTTTATCTaGGGGTTGGTCCAGAAGGTGTCCAGGAAGTTGCGACAGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: QPSWPSSLSVRDSFI*GLVQKVSRKLRQPP Trigger: TGGTGGCTGTCGCAACTTCCTGGACACCTTCTGGACCAACCCTCAGATAAAGCTGTCCCTGACCGAGAGGGACGAGGGCCAGGAGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS TCA 90 bp | TCAGGCAGAAGTCGGCCTCCTGATGCGGCTCAAAGGTGCTGGGGATaGGGATATAGTCTCCCGGGGGCAGCTGGAATCGCTCTGAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: SGRSRPPDAAQRCWG*GYSLPGAAGIALRL Trigger: AAGTCTCAGAGCGATTCCAGCTGCCCCCGGGAGACTATATCCTCATCCCCAGCACCTTTGAGCCGCATCAGGAGGCCGACTTCTGCCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | GGGACAGCTTTATCTGAGGGTTGGTCCAGAAGGTGTCCAGGAAGTTaGGACAGCCACCAGCAGTGGAGCCACGGACCCAGCTTCCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTALSEGWSRRCPGS*DSHQQWSHGPSFLG Trigger: ACCAAGGAAGCTGGGTCCGTGGCTCCACTGCTGGTGGCTGTCGCAACTTCCTGGACACCTTCTGGACCAACCCTCAGATAAAGCTGTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | ACCTCCATGTCCTCGCCAGCAACTCGCTGGAACAGGGCCCGGAACTaGTGTTCCTCTTCTGTTTCCTCCTCCTGTGGAGTCGGCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSMSSPATRWNRARN*CSSSVSSSCGVGFG Trigger: TCCAAAGCCGACTCCACAGGAGGAGGAAACAGAAGAGGAACAGCAGTTCCGGGCCCTGTTCCAGCGAGTTGCTGGCGAGGACATGGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 90 bp | CAAAGGGGACCTGGGGCCTCTCGCTGTAGAACAGGGAGACATTGCTaGCAGGGAAGTCAGCATCCTCAAACAAGGTGCCAGACTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRGPGASRCRTGRHC*QGSQHPQTRCQTAG Trigger: GCCTGCAGTCTGGCACCTTGTTTGAGGATGCTGACTTCCCTGCCAGCAATGTCTCCCTGTTCTACAGCGAGAGGCCCCAGGTCCCCTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 90 bp | TCAAGCTCCTCAGCTGACACCTCCATGTCCTCGCCAGCAACTCGCTaGAACAGGGCCCGGAACTGCTGTTCCTCTTCTGTTTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSADTSMSSPATR*NRARNCCSSSVSSS Trigger: GGAGGAGGAAACAGAAGAGGAACAGCAGTTCCGGGCCCTGTTCCAGCGAGTTGCTGGCGAGGACATGGAGGTGTCAGCTGAGGAGCTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | ACAGGGAGACATTGCTGGCAGGGAAGTCAGCATCCTCAAACAAGGTaGCAGACTGCAGGCAGCCCTGCCTCAGCTGCTCAAAGCTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TGRHCWQGSQHPQTR*QTAGSPASAAQSSD Trigger: GTCAGAGCTTTGAGCAGCTGAGGCAGGGCTGCCTGCAGTCTGGCACCTTGTTTGAGGATGCTGACTTCCCTGCCAGCAATGTCTCCCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS TCA 90 bp | CCTCTGGTGCCTCTCGGATTTGGAAGTTCTCAGCCACACCCCCAGTaGAGTCTTCCATGGCTTCAATGGCACTGCCTCCCTTCAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLVPLGFGSSQPHPQ*SLPWLQWHCLPSVP Trigger: AGGCACTGAAGGGAGGCAGTGCCATTGAAGCCATGGAAGACTTCACTGGGGGTGTGGCTGAGAACTTCCAAATCCGAGAGGCACCAGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS TCA 90 bp | GCTGGGGATGAGGATATAGTCTCCCGGGGGCAGCTGGAATCGCTCTaGGACTTCTCTCAAGTTGATGAACGTCTTGCTTCGGGCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AGDEDIVSRGQLESL*DFSQVDERLASGQG Trigger: TCCCTGGCCCGAAGCAAGACGTTCATCAACTTGAGAGAAGTCTCAGAGCGATTCCAGCTGCCCCCGGGAGACTATATCCTCATCCCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | ACACAAAGGGGACCTGGGGCCTCTCGCTGTAGAACAGGGAGACATTaGTGGCAGGGAAGTCAGCATCCTCAAACAAGGTGCCAGACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TQRGPGASRCRTGRH*WQGSQHPQTRCQTA Trigger: TGCAGTCTGGCACCTTGTTTGAGGATGCTGACTTCCCTGCCAGCAATGTCTCCCTGTTCTACAGCGAGAGGCCCCAGGTCCCCTTTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGGGGAGGAGGGTGGTGTGAGGCCGGGAGGAGAGAGAGCAGTGGGCGGGTTGTCAAAATGGATCTaGAAGTCTTTGAATGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: WRGEEGGVRPGGERAVGGLSKWI*KSLNAI Trigger: GATGGCATTCAAAGACTTCAAGATCCATTTTGACAA...CCCGCCCACTGCTCTCTCTCCTCCCGGCCTCACACCACCCTCCTCCCCTCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS TCA 90 bp | GAGATTGGAACACCCGGCTTGCATTCTCCAGCCGCACCAGGCAGTTaGGGTAGTCATCGAAATCCAGCTGGAGGTCCTCATCTGCATACC | + |
|
Preference number: 5 (lower is better) Translates to: EIGTPGLHSPAAPGS*GSHRNPAGGPHLHT Trigger: GGTATGCAGATGAGGACCTCCAGCTGGATTTCGATGACTACCTCAACTGCCTGGTGCGGCTGGAGAATGCAAGCCGGGTGTTCCAATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | CAGGCAGTTGAGGTAGTCATCGAAATCCAGCTGGAGGTCCTCATCTaGATACCTGAGGACAATCAGCTGCAGGAGATGGCCACCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QAVEVVIEIQLEVLI*IPEDNQLQEMATQL Trigger: CAGCTGGGTGGCCATCTCCTGCAGCTGATTGTCCTCAGGTATGCAGATGAGGACCTCCAGCTGGATTTCGATGACTACCTCAACTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTAAGACCAGGCGGTCCTaGAAGGTGGGCAGGCGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGKTRRS*KVGRRS Trigger: TGACCGCCTGCCCACCTTCAAGGACCGCCTGGTCTT...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | AGCCTGCAGCTTTCAGTGCCGTCCGCAGCTCATAGGAAGACATGGTaGCAGACTTGTCCACATCGAACTGGAGAAACAGGTCCATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLQLSVPSAAHRKTW*QTCPHRTGETGPSS Trigger: ACTGGATGGACCTGTTTCTCCAGTTCGATGTGGACAAGTCTGGCACCATGTCTTCCTATGAGCTGCGGACGGCACTGAAAGCTGCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 90 bp | GAAAGCCTGCAGCTTTCAGTGCCGTCCGCAGCTCATAGGAAGACATaGTGCCAGACTTGTCCACATCGAACTGGAGAAACAGGTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: ESLQLSVPSAAHRKT*CQTCPHRTGETGPS Trigger: GGATGGACCTGTTTCTCCAGTTCGATGTGGACAAGTCTGGCACCATGTCTTCCTATGAGCTGCGGACGGCACTGAAAGCTGCAGGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | CCCAGTGAAGTCTTCCATGGCTTCAATGGCACTGCCTCCCTTCAGTaGCTCATAACTCCCGTTAAGCTTGGCATAGGCTTTCTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSEVFHGFNGTASLQ*LITPVKLGIGFLQQ Trigger: CTGCTGGAGAAAGCCTATGCCAAGCTTAACGGGAGTTATGAGGCACTGAAGGGAGGCAGTGCCATTGAAGCCATGGAAGACTTCACTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 90 bp | ACTTCTCTCAAGTTGATGAACGTCTTGCTTCGGGCCAGGGAGGCATaGTACCTGAAAAAGTCCCTACTCAGGTGTCCGTCCTTGTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TSLKLMNVLLRAREA*YLKKSLLRCPSLSG Trigger: CCCAGACAAGGACGGACACCTGAGTAGGGACTTTTTCAGGTACCATGCCTCCCTGGCCCGAAGCAAGACGTTCATCAACTTGAGAGAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 90 bp | GAACTGCTGTTCCTCTTCTGTTTCCTCCTCCTGTGGAGTCGGCTTTaGAAGCTCAGGAAGGTCAATGTCTATGTTCTCGTCCAGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ELLFLFCFLLLWSRL*KLRKVNVYVLVQVP Trigger: CGGGACCTGGACGAGAACATAGACATTGACCTTCCTGAGCTTCCAAAGCCGACTCCACAGGAGGAGGAAACAGAAGAGGAACAGCAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTAAGGTGTCCAGGAAGTaGCGACAGCCACCAGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGKVSRK*RQPPAV Trigger: CACTGCTGGTGGCTGTCGCAACTTCCTGGACACCTT...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTTGGTGCCTCTCGGATTaGGAAGTTCTCAGCCACACC | + |
|
Preference number: 5 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGWCLSD*EVLSHT Trigger: GGTGTGGCTGAGAACTTCCAAATCCGAGAGGCACCA...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTAAGTTGATGAACGTCTaGCTTCGGGCCAGGGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGKLMNV*LRAREA Trigger: TGCCTCCCTGGCCCGAAGCAAGACGTTCATCAACTT...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | GTTGCAGATCTCCACTTTGTCAAAATGGATCTTGAAGTCTTTGAATaGCATCCAGAACTCCCCGTCATCAAGGGCAGTGTGGCCCAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: VADLHFVKMDLEVFE*HPELPVIKGSVAQA Trigger: CGCCTGGGCCACACTGCCCTTGATGACGGGGAGTTCTGGATGGCATTCAAAGACTTCAAGATCCATTTTGACAAAGTGGAGATCTGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 90 bp | GCCTTCTCCAGAATCTCAAAGAAATCCTCTGGTGCCTCTCGGATTTaGAAGTTCTCAGCCACACCCCCAGTGAAGTCTTCCATGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AFSRISKKSSGASRI*KFSATPPVKSSMAS Trigger: TGAAGCCATGGAAGACTTCACTGGGGGTGTGGCTGAGAACTTCCAAATCCGAGAGGCACCAGAGGATTTCTTTGAGATTCTGGAGAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTCGGACTCTGATGAGCTaGATTCTCTGGCCATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGRTLMS*ILWPWK Trigger: CTTCCATGGCCAGAGAATCAAGCTCATCAGAGTCCG...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 90 bp | CAGGACAGCAGGCTCAGCCTCTTGAACTTGAGGGCTGTTTTCTTCTaGAGAACAGCATTTAGAACATATTCAAGCTCCTCAGCTGACACC | + |
|
Preference number: 5 (lower is better) Translates to: QDSRLSLLNLRAVFF*RTAFRTYSSSSADT Trigger: GGTGTCAGCTGAGGAGCTTGAATATGTTCTAAATGCTGTTCTGCAGAAGAAAACAGCCCTCAAGTTCAAGAGGCTGAGCCTGCTGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS-3UTR CAA 90 bp | CAGCCAATCCCTTTAGATTCTTCTAACTCACTATGGAGAGGGGAGGAGGGTGGTGAGACTTCTCTCAAGTaGATGAACGTCTTGCTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: QPIPLDSSNSLWRGEEGGETSLK*MNVLLR Trigger: CCGAAGCAAGACGTTCATCAACTTGAGAGAAGTCTC...ACCACCCTCCTCCCCTCTCCATAGTGAGTTAGAAGAATCTAAAGGGATTGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 72 bp | TCCCCGTCATCAAGGGCAGTGTGGCCCAGGCGCTTCTaGTCCTCCAGGTCCACAGAGCGCCACTCAGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SPSSRAVWPRRF*SSRSTERHSGE Trigger: CTCTCCTGAGTGGCGCTCTGTGGACCTGGAGGAGCAGAAGCGCCTGGGCCACACTGCCCTTGATGACGGGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | ACAGCCACCAGCAGTGGAGCCACGGACCCAGCTTCCTaGGTGGATGGTCACCTCCCACCTGTGGAGGGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TATSSGATDPAS*VDGHLPPVEGA Trigger: AGCGCCCTCCACAGGTGGGAGGTGACCATCCACCAAGGAAGCTGGGTCCGTGGCTCCACTGCTGGTGGCTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 72 bp | GGAGTGGATAGTCCTGGCATCCCCGGGGACTGGCTGTaGCTGTGGCCTCAGGGACCGATGCAGGTAAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GVDSPGIPGDWL*LWPQGPMQVRH Trigger: ATGCCTTACCTGCATCGGTCCCTGAGGCCACAGCCACAGCCAGTCCCCGGGGATGCCAGGACTATCCACTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093033.6 ENSMUST00000133086.2 |
||
| CDS CCA 72 bp | ATGGCCGCCAGGAGCCAGCAGTCTCCCAGCTCCCCTTaGCAAATGTCGGTCCTGGTGGCCCCTCCAAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: MAARSQQSPSSP*QMSVLVAPPRM Trigger: CATTCTTGGAGGGGCCACCAGGACCGACATTTGCCAAGGGGAGCTGGGAGACTGCTGGCTCCTGGCGGCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093033.6 ENSMUST00000133086.2 |
||
| CDS CAA 72 bp | AATGGCCGCCAGGAGCCAGCAGTCTCCCAGCTCCCCTaGGCAAATGTCGGTCCTGGTGGCCCCTCCAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: NGRQEPAVSQLP*ANVGPGGPSKN Trigger: ATTCTTGGAGGGGCCACCAGGACCGACATTTGCCAAGGGGAGCTGGGAGACTGCTGGCTCCTGGCGGCCATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093033.6 ENSMUST00000133086.2 |
||
| CDS TCA 72 bp | AGTCGGCCTCCTGATGCGGCTCAAAGGTGCTGGGGATaGGGATATAGTCTCCCGGGGGCAGCTGGAATCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRPPDAAQRCWG*GYSLPGAAGIA Trigger: AGCGATTCCAGCTGCCCCCGGGAGACTATATCCTCATCCCCAGCACCTTTGAGCCGCATCAGGAGGCCGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS TCA 72 bp | TGGCCCTCGTCCCTCTCGGTCAGGGACAGCTTTATCTaGGGGTTGGTCCAGAAGGTGTCCAGGAAGTTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: WPSSLSVRDSFI*GLVQKVSRKLR Trigger: TCGCAACTTCCTGGACACCTTCTGGACCAACCCTCAGATAAAGCTGTCCCTGACCGAGAGGGACGAGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 72 bp | GAGATGGCCACCCAGCTGAAAGCCTGCAGCTTTCAGTaGCGTCCGCAGCTCATAGGAAGACATGGTGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: EMATQLKACSFQ*RPQLIGRHGAR Trigger: TCTGGCACCATGTCTTCCTATGAGCTGCGGACGGCACTGAAAGCTGCAGGCTTTCAGCTGGGTGGCCATCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 72 bp | CCTGGGGCCTCTCGCTGTAGAACAGGGAGACATTGCTaGCAGGGAAGTCAGCATCCTCAAACAAGGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGASRCRTGRHC*QGSQHPQTRCQ Trigger: CTGGCACCTTGTTTGAGGATGCTGACTTCCCTGCCAGCAATGTCTCCCTGTTCTACAGCGAGAGGCCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 72 bp | TTCTGCATCAAGGCTGCTAGGAAAGTGCAGCCCTCCTaGCCCTCGTCCCTCTCGGTCAGGGACAGCTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: FCIKAARKVQPS*PSSLSVRDSFI Trigger: GATAAAGCTGTCCCTGACCGAGAGGGACGAGGGCCAGGAGGGCTGCACTTTCCTAGCAGCCTTGATGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 72 bp | TCAGCTGACACCTCCATGTCCTCGCCAGCAACTCGCTaGAACAGGGCCCGGAACTGCTGTTCCTCTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SADTSMSSPATR*NRARNCCSSSV Trigger: AACAGAAGAGGAACAGCAGTTCCGGGCCCTGTTCCAGCGAGTTGCTGGCGAGGACATGGAGGTGTCAGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | GGGGGCAGCTGGAATCGCTCTGAGACTTCTCTCAAGTaGATGAACGTCTTGCTTCGGGCCAGGGAGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: GGSWNRSETSLK*MNVLLRAREAW Trigger: CCATGCCTCCCTGGCCCGAAGCAAGACGTTCATCAACTTGAGAGAAGTCTCAGAGCGATTCCAGCTGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS TCA 72 bp | ACACCCGGCTTGCATTCTCCAGCCGCACCAGGCAGTTaGGGTAGTCATCGAAATCCAGCTGGAGGTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TPGLHSPAAPGS*GSHRNPAGGPH Trigger: ATGAGGACCTCCAGCTGGATTTCGATGACTACCTCAACTGCCTGGTGCGGCTGGAGAATGCAAGCCGGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS TCA 72 bp | CCTCTCGGATTTGGAAGTTCTCAGCCACACCCCCAGTaGAGTCTTCCATGGCTTCAATGGCACTGCCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLGFGSSQPHPQ*SLPWLQWHCLP Trigger: AGGGAGGCAGTGCCATTGAAGCCATGGAAGACTTCACTGGGGGTGTGGCTGAGAACTTCCAAATCCGAGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 72 bp | GAGGTAGTCATCGAAATCCAGCTGGAGGTCCTCATCTaGATACCTGAGGACAATCAGCTGCAGGAGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EVVIEIQLEVLI*IPEDNQLQEMA Trigger: GGCCATCTCCTGCAGCTGATTGTCCTCAGGTATGCAGATGAGGACCTCCAGCTGGATTTCGATGACTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 90 bp | GGCAGCTGGAATCGCTCTGAGACTTCTCTCAAGTTGATGAACGTCTaGCTTCGGGCCAGGGAGGCATGGTACCTGAAAAAGTCCCTACTC | + |
|
Preference number: 6 (lower is better) Translates to: GSWNRSETSLKLMNV*LRAREAWYLKKSLL Trigger: GAGTAGGGACTTTTTCAGGTACCATGCCTCCCTGGCCCGAAGCAAGACGTTCATCAACTTGAGAGAAGTCTCAGAGCGATTCCAGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 90 bp | GGAACTGCTGTTCCTCTTCTGTTTCCTCCTCCTGTGGAGTCGGCTTaGGAAGCTCAGGAAGGTCAATGTCTATGTTCTCGTCCAGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GTAVPLLFPPPVESA*EAQEGQCLCSRPGP Trigger: GGGACCTGGACGAGAACATAGACATTGACCTTCCTGAGCTTCCAAAGCCGACTCCACAGGAGGAGGAAACAGAAGAGGAACAGCAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 72 bp | CAGCTTTCAGTGCCGTCCGCAGCTCATAGGAAGACATaGTGCCAGACTTGTCCACATCGAACTGGAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: QLSVPSAAHRKT*CQTCPHRTGET Trigger: TGTTTCTCCAGTTCGATGTGGACAAGTCTGGCACCATGTCTTCCTATGAGCTGCGGACGGCACTGAAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 90 bp | AGCTTGTCCCAGAAGACCCGGAACTCTTCAAACTCCAGCTTCCCGTaGCCACTGGTATCCATCAGAGAGATGATGTTTCTGCAGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSQKTRNSSNSSFP*PLVSIREMMFLQDS Trigger: GCTGTCCTGCAGAAACATCATCTCTCTGATGGATACCAGTGGCAACGGGAAGCTGGAGTTTGAAGAGTTCCGGGTCTTCTGGGACAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 90 bp | CCAGAACTGGAAATGAAATATCCCGGCATAGCCAGAACCAAATCCTaGGTCCTGGGGAACCACCCTGGTCAGTGCTTTCTGATTGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: PELEMKYPGIARTKS*VLGNHPGQCFLIEG Trigger: ACCCTCAATCAGAAAGCACTGACCAGGGTGGTTCCCCAGGACCAAGGATTTGGTTCTGGCTATGCCGGGATATTTCATTTCCAGTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 90 bp | AGCCTTCTCCAGAATCTCAAAGAAATCCTCTGGTGCCTCTCGGATTaGGAAGTTCTCAGCCACACCCCCAGTGAAGTCTTCCATGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLLQNLKEILWCLSD*EVLSHTPSEVFHGF Trigger: GAAGCCATGGAAGACTTCACTGGGGGTGTGGCTGAGAACTTCCAAATCCGAGAGGCACCAGAGGATTTCTTTGAGATTCTGGAGAAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 90 bp | TTGTCCACATCGAACTGGAGAAACAGGTCCATCCAGTGTTTCAGCTaGTCCCAGAAGACCCGGAACTCTTCAAACTCCAGCTTCCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LSTSNWRNRSIQCFS*SQKTRNSSNSSFPL Trigger: CAACGGGAAGCTGGAGTTTGAAGAGTTCCGGGTCTTCTGGGACAAGCTGAAACACTGGATGGACCTGTTTCTCCAGTTCGATGTGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 72 bp | GTCTTCCATGGCTTCAATGGCACTGCCTCCCTTCAGTaGCTCATAACTCCCGTTAAGCTTGGCATAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VFHGFNGTASLQ*LITPVKLGIGF Trigger: AAAGCCTATGCCAAGCTTAACGGGAGTTATGAGGCACTGAAGGGAGGCAGTGCCATTGAAGCCATGGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | GAAATGAAATATCCCGGCATAGCCAGAACCAAATCCTaGGTCCTGGGGAACCACCCTGGTCAGTGCTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EMKYPGIARTKS*VLGNHPGQCFL Trigger: CAGAAAGCACTGACCAGGGTGGTTCCCCAGGACCAAGGATTTGGTTCTGGCTATGCCGGGATATTTCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | TCGAACTGGAGAAACAGGTCCATCCAGTGTTTCAGCTaGTCCCAGAAGACCCGGAACTCTTCAAACTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SNWRNRSIQCFS*SQKTRNSSNSS Trigger: GCTGGAGTTTGAAGAGTTCCGGGTCTTCTGGGACAAGCTGAAACACTGGATGGACCTGTTTCTCCAGTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CCA 72 bp | TTCGAGCTTCAGATTCTGAGGCATTCAGGGTATCTATaGAGCATCCCAGCAAGGAACCACGCTTCAAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: FELQILRHSGYL*SIPARNHASKP Trigger: AGGCTTTGAAGCGTGGTTCCTTGCTGGGATGCTCCATAGATACCCTGAATGCCTCAGAATCTGAAGCTCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | CAGAATCTCAAAGAAATCCTCTGGTGCCTCTCGGATTaGGAAGTTCTCAGCCACACCCCCAGTGAAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: QNLKEILWCLSD*EVLSHTPSEVF Trigger: GAAGACTTCACTGGGGGTGTGGCTGAGAACTTCCAAATCCGAGAGGCACCAGAGGATTTCTTTGAGATTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | AATCGCTCTGAGACTTCTCTCAAGTTGATGAACGTCTaGCTTCGGGCCAGGGAGGCATGGTACCTGAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: NRSETSLKLMNV*LRAREAWYLKK Trigger: CTTTTTCAGGTACCATGCCTCCCTGGCCCGAAGCAAGACGTTCATCAACTTGAGAGAAGTCTCAGAGCGATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | GTTCCTCTTCTGTTTCCTCCTCCTGTGGAGTCGGCTTaGGAAGCTCAGGAAGGTCAATGTCTATGTTCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: VPLLFPPPVESA*EAQEGQCLCSR Trigger: ACGAGAACATAGACATTGACCTTCCTGAGCTTCCAAAGCCGACTCCACAGGAGGAGGAAACAGAAGAGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | GAGATGATGTTTCTGCAGGACAGCAGGCTCAGCCTCTaGAACTTGAGGGCTGTTTTCTTCTGCAGAACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: EMMFLQDSRLSL*NLRAVFFCRTA Trigger: TGCTGTTCTGCAGAAGAAAACAGCCCTCAAGTTCAAGAGGCTGAGCCTGCTGTCCTGCAGAAACATCATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | CAGAAGACCCGGAACTCTTCAAACTCCAGCTTCCCGTaGCCACTGGTATCCATCAGAGAGATGATGTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: QKTRNSSNSSFP*PLVSIREMMFL Trigger: CAGAAACATCATCTCTCTGATGGATACCAGTGGCAACGGGAAGCTGGAGTTTGAAGAGTTCCGGGTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS GCA 72 bp | CTCCACTTTGTCAAAATGGATCTTGAAGTCTTTGAATaGCATCCAGAACTCCCCGTCATCAAGGGCAGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LHFVKMDLEVFE*HPELPVIKGSV Trigger: CACACTGCCCTTGATGACGGGGAGTTCTGGATGGCATTCAAAGACTTCAAGATCCATTTTGACAAAGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | ATGTTTCTGCAGGACAGCAGGCTCAGCCTCTTGAACTaGAGGGCTGTTTTCTTCTGCAGAACAGCATTTAGA | + |
|
Preference number: 6 (lower is better) Translates to: MFLQDSRLSLLN*RAVFFCRTAFR Trigger: TCTAAATGCTGTTCTGCAGAAGAAAACAGCCCTCAAGTTCAAGAGGCTGAGCCTGCTGTCCTGCAGAAACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||
| CDS CAA 72 bp | CAGATCTCCACTTTGTCAAAATGGATCTTGAAGTCTTaGAATGCCATCCAGAACTCCCCGTCATCAAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: QISTLSKWILKS*NAIQNSPSSRA Trigger: TGCCCTTGATGACGGGGAGTTCTGGATGGCATTCAAAGACTTCAAGATCCATTTTGACAAAGTGGAGATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093033.6 |
||