Pregenerated sensors for CAPN6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067276Ensembl transcript IDs: ENSMUST00000087316.6
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGTGTGCGCTTGCGTGCGCGTGTGTGAGTGTAGGTGTGTGTGGATaGGTGGGGGACCGAGGCTTTGTCTCCCACTGCAGCTTCTTCAAC | + |
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Preference number: 1 (lower is better) Translates to: SCALACACVSVGVCG*VGDRGFVSHCSFFN Trigger: GTTGAAGAAGCTGCAGTGGGAGACAAAGCCTCGGTCCCCCACCCATCCACACACACCTACACTCACACACGCGCACGCAAGCGCACACGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR GCA 90 bp | GTAGGTGTGTGTGGATGGGTGGGGGACCGAGGCTTTGTCTCCCACTaGAGCTTCTTCAACTTCTCCCTCTTATGGCACACAGCTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: VGVCGWVGDRGFVSH*SFFNFSLLWHTAGF Trigger: GAAGCCAGCTGTGTGCCATAAGAGGGAGAAGTTGAAGAAGCTGCAGTGGGAGACAAAGCCTCGGTCCCCCACCCATCCACACACACCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR TCA 90 bp | GGAAGCTTCCTCAACATGAAGGTAAAACACTGTGGGGGAGTTACTTaGGTTAGGGCAGGACCACACTTTCCAGAGGTGGTGGTGGTGGTA | + |
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Preference number: 1 (lower is better) Translates to: GSFLNMKVKHCGGVT*VRAGPHFPEVVVVV Trigger: TACCACCACCACCACCTCTGGAAAGTGTGGTCCTGCCCTAACTCAAGTAACTCCCCCACAGTGTTTTACCTTCATGTTGAGGAAGCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR TCA 90 bp | ACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTTATGTAGCTACTaGTGCTACTTGGATCAGGAGGTATGGGAAATATCAGAAAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: TSPVQLLEVYRLCSY*CYLDQEVWEISEKR Trigger: TCTCTTTTCTGATATTTCCCATACCTCCTGATCCAAGTAGCATCAGTAGCTACATAACCTATATACCTCCAGCAGCTGGACAGGGGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR GCA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATCCTCCCCTGTCCAGCTaGTGGAGGTATATAGGTTAT | + |
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Preference number: 2 (lower is better) Translates to: QLASQLLKLKPFSLSQPHPPLSS*WRYIGY Trigger: ATAACCTATATACCTCCAGCAGCTGGACAGGGGAGG...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTGATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGCCCCTGTCCAGCTGCTaGAGGTATATAGGTTATGTA | + |
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Preference number: 2 (lower is better) Translates to: VADKSIVSVRSWDVRLDQPLSSC*RYIGYV Trigger: TACATAACCTATATACCTCCAGCAGCTGGACAGGGG...CTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATCAGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR TCA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATTTAAGACCTTGTGCCTaGCAAAAGAAGATGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: QLASQLLKLKPFSLSQPHLRPCA*QKKMES Trigger: GCTTTCCATCTTCTTTTGTCAGGCACAAGGTCTTAA...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTGATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGAGGTTATGTAGCTACTaGTGCTACTTGGATCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VADKSIVSVRSWDVRLDQRLCSY*CYLDQE Trigger: CTCCTGATCCAAGTAGCATCAGTAGCTACATAACCT...CTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATCAGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR CAA 90 bp | GGTGGAAACAGCAAACACACATGTAGGATGTCCACATTCTTGCTATaGTCCCATTTGAATCTCACCCCTGGAAGCCCTAAGGATCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GGNSKHTCRMSTFLL*SHLNLTPGSPKDLF Trigger: GAAAAGATCCTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACATCCTACATGTGTGTTTGCTGTTTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR CCA 90 bp | ACCCCTGGAAGCCCTAAGGATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGACCTGACAAAAGAAGATaGAAAGCTGTCAGGATTCTC | + |
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Preference number: 2 (lower is better) Translates to: TPGSPKDLFSVNVCMISRPDKRR*KAVRIL Trigger: GAGAATCCTGACAGCTTTCCATCTTCTTTTGTCAGG...TCTGGAGATCATACACACGTTTACTGAGAAAAGATCCTTAGGGCTTCCAGGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR CCA 90 bp | GTTAGGCAGGTGGAAACAGCAAACACACATGTAGGATGTCCACATTCTTGCTATGCTACTGATGCTACTTaGATCAGGAGGTATGGGAAA | + |
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Preference number: 2 (lower is better) Translates to: VRQVETANTHVGCPHSCYATDAT*IRRYGK Trigger: TTTCCCATACCTCCTGATCCAAGTAGCATCAGTAGC...ATAGCAAGAATGTGGACATCCTACATGTGTGTTTGCTGTTTCCACCTGCCTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR CAA 90 bp | AGCAAACACACATGTAGGATGTCCACATTCTTGCTATTGTCCCATTaGAATCTCACCCCTGGAAGCCCTAAGGATCTTTTCTCAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: SKHTCRMSTFLLLSH*NLTPGSPKDLFSVN Trigger: GTTTACTGAGAAAAGATCCTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACATCCTACATGTGTGTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCCTCCTTCATCAACAAGCCCTACAGGTAAAATGTGTTAGGCAGGTGGAATTGGATCAGGAGGTATaGGAAATATCAGAAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: SVLLHQQALQVKCVRQVELDQEV*EISEKR Trigger: TCTCTTTTCTGATATTTCCCATACCTCCTGATCCAA...TTCCACCTGCCTAACACATTTTACCTGTAGGGCTTGTTGATGAAGGAGGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCTTGAATAGGGGCAGAATACTGATAGATGAGGATGAAGGGAAGAACATATTAGTTAAGACCTTGTaGCTGACAAAAGAAGATGGA | + |
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Preference number: 2 (lower is better) Translates to: WALNRGRILIDEDEGKNILVKTL*LTKEDG Trigger: TCCATCTTCTTTTGTCAGGCACAAGGTCTTAACTAA...TATGTTCTTCCCTTCATCCTCATCTATCAGTATTCTGCCCCTATTCAAGGCCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR CCA 72 bp | CTTGCGTGCGCGTGTGTGAGTGTAGGTGTGTGTGGATaGGTGGGGGACCGAGGCTTTGTCTCCCACTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LACACVSVGVCG*VGDRGFVSHCS Trigger: GCTGCAGTGGGAGACAAAGCCTCGGTCCCCCACCCATCCACACACACCTACACTCACACACGCGCACGCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR TCA 72 bp | GTGCATGATACTTCACTAGTCCTTATTCTTGCCCACTaGCTGAATGGTAGTTCGTGTGCGCTTGCGTGCGCG | + |
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Preference number: 3 (lower is better) Translates to: VHDTSLVLILAH*LNGSSCALACA Trigger: CGCGCACGCAAGCGCACACGAACTACCATTCAGTCAGTGGGCAAGAATAAGGACTAGTGAAGTATCATGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR TCA 72 bp | CTCAACATGAAGGTAAAACACTGTGGGGGAGTTACTTaGGTTAGGGCAGGACCACACTTTCCAGAGGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: LNMKVKHCGGVT*VRAGPHFPEVV Trigger: CACCACCTCTGGAAAGTGTGGTCCTGCCCTAACTCAAGTAACTCCCCCACAGTGTTTTACCTTCATGTTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR GCA 72 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTaGTGGAGGTATATAGGTTATGTAGCTACTGATGCT | + |
|
Preference number: 3 (lower is better) Translates to: DLQMGLSPPLSS*WRYIGYVATDA Trigger: AGCATCAGTAGCTACATAACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR CCA 72 bp | CTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTaGAGGTATATAGGTTATGTAGCTACTGATGCTACT | + |
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Preference number: 3 (lower is better) Translates to: LQMGLSPPLSSC*RYIGYVATDAT Trigger: AGTAGCATCAGTAGCTACATAACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR CCA 72 bp | GATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATaGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: DLFSVNVCMISR*DCHLPCPAAGG Trigger: ACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAAAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR CCA 72 bp | AATGTGGCTGATAAATCCATAGTGTCAGTTAGGAGCTaGGATGTCAGGCTAGACCAGCTTGGCCTTGATCAC | + |
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Preference number: 3 (lower is better) Translates to: NVADKSIVSVRS*DVRLDQLGLDH Trigger: GTGATCAAGGCCAAGCTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATCAGCCACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR CAA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATAGGATGTCCACATTCTaGCTATTGTCCCATTTGAAT | + |
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Preference number: 3 (lower is better) Translates to: QLASQLLKLKPFSLSQPHRMSTF*LLSHLN Trigger: ATTCAAATGGGACAATAGCAAGAATGTGGACATCCT...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR TCA 72 bp | GGGCTGGGACTGTTAAAAGTCAGCTCTGGCTACTGGTaGAATGTGGCTGATAAATCCATAGTGTCAGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: GLGLLKVSSGYW*NVADKSIVSVR Trigger: CCTAACTGACACTATGGATTTATCAGCCACATTTCACCAGTAGCCAGAGCTGACTTTTAACAGTCCCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR-3UTR CAA 90 bp | TCTGTCCTCCTTCATCAACAAGCCCTACAGGTAAAATGTGTTAGGCAGGTGGAATCCACATTCTTGCTATaGTCCCATTTGAATCTCACC | + |
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Preference number: 3 (lower is better) Translates to: SVLLHQQALQVKCVRQVESTFLL*SHLNLT Trigger: GGTGAGATTCAAATGGGACAATAGCAAGAATGTGGA...TTCCACCTGCCTAACACATTTTACCTGTAGGGCTTGTTGATGAAGGAGGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR TCA 72 bp | GTCCAGCTGCTGGAGGTATATAGGTTATGTAGCTACTaGTGCTACTTGGATCAGGAGGTATGGGAAATATCA | + |
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Preference number: 3 (lower is better) Translates to: VQLLEVYRLCSY*CYLDQEVWEIS Trigger: TGATATTTCCCATACCTCCTGATCCAAGTAGCATCAGTAGCTACATAACCTATATACCTCCAGCAGCTGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR GCA 72 bp | AATTTCAGTAATCGTGGGGTCTTAGTTAAGACCTTGTaGCTGACAAAAGAAGATGGAAAGCTGTCAGGATTC | + |
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Preference number: 3 (lower is better) Translates to: NFSNRGVLVKTL*LTKEDGKLSGF Trigger: GAATCCTGACAGCTTTCCATCTTCTTTTGTCAGGCACAAGGTCTTAACTAAGACCCCACGATTACTGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | AGGCTAGACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTCCAACATCCCACCACTaGTTCCAGCTCCTTGCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLDQLGLDHLCPPSSTSPPTSHH*FQLLAA Trigger: GGCCGCAAGGAGCTGGAATCAGTGGTGGGATGTTGG...AGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTCTAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR GCA 90 bp | AGGCTAGACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTCCTTGTTCCCCAATCTaGCCTGGATCAGCTGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: RLDQLGLDHLCPPSSTSPPCSPI*PGSAGG Trigger: ACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGG...AGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTCTAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | AGGCTAGACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTTCAGCTGGTGGTTGCTaGTGTTGCCCACAATCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RLDQLGLDHLCPPSSTSPSAGGC*CCPQSG Trigger: ACCTGATTGTGGGCAACATCAGCAACCACCAGCTGA...AGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTCTAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | AGGCTAGACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTCATGGAGGTGGAGAATaGGAAGACCAGATCTCCGTT | + |
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Preference number: 4 (lower is better) Translates to: RLDQLGLDHLCPPSSTSPHGGGE*EDQISV Trigger: AACGGAGATCTGGTCTTCTCATTCTCCACCTCCATG...AGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTCTAGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | GACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTGTTATAGCAACCTCCTaGTCGGTTCATCAGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: DQLGLDHLCPPSSTSPTGVIATS*SVHQRV Trigger: GACCCTCTGATGAACCGATCAGGAGGTTGCTATAAC...ACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR GCA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATCTTTGGGTAGCCACGTaGCAGGTTCCAGCAAGACAT | + |
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Preference number: 4 (lower is better) Translates to: QLASQLLKLKPFSLSQPHLWVAT*QVPARH Trigger: ATGTCTTGCTGGAACCTGGCACGTGGCTACCCAAAG...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CCA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTTTGCCCACAATCAGGTaGGGGTCATCAGAAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGLPTIR*GSSEMS Trigger: GGACATTTCTGATGACCCCCACCTGATTGTGGGCAA...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATTGCCTTTGTCCAGTGTaGCTCCTGAACAGCCAAACA | + |
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Preference number: 4 (lower is better) Translates to: QLASQLLKLKPFSLSQPHCLCPV*LLNSQT Trigger: TGTTTGGCTGTTCAGGAGTCACACTGGACAAAGGCA...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTTGCCAGAAGCGGAAGTaGAAGATTCCAGCGTATTTC | + |
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Preference number: 4 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGCQKRK*KIPAYF Trigger: GAAATACGCTGGAATCTTTCACTTCCGCTTCTGGCA...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR GCA 90 bp | GATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGCTTGGCGGCGGCCATCCTTCATaGACTCCTGCTTCAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: DKSIVSVRSWDVRLDQLGGGHPS*TPASVL Trigger: AAGAACTGAAGCAGGAGTGCATGAAGGATGGCCGCC...GCCAAGCTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CCA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTATCAGAAATGTCCTGTaGACGCTTCCACACCACCTT | + |
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Preference number: 4 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGIRNVL*TLPHHL Trigger: AAGGTGGTGTGGAAGCGTCCACAGGACATTTCTGAT...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CCA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTCCTGATCCTTGTGGTTaGGAATTGCCTTTGTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGPDPCG*ELPLSS Trigger: ACTGGACAAAGGCAATTCCCAACCACAAGGATCAGG...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CCA 90 bp | GTGGCTGATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGGGGTGTCGATATAAGTaGAAGTCCCAGCACGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VADKSIVSVRSWDVRLDQGCRYK*KSQHAP Trigger: AGGAGCGTGCTGGGACTTCCACTTATATCGACACCC...CTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATCAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| 3UTR CAA 72 bp | ACTTCTCCCTCTTATGGCACACAGCTGGCTTCCCAATaGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: TSPSYGTQLASQ*LKLKPFSLSQP Trigger: CGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTGTGTGCCATAAGAGGGAGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATGTCCAGTGTGACTCCTaGACAGCCAAACAGGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: QLASQLLKLKPFSLSQPHVQCDS*TAKQEN Trigger: ATTTTCCTGTTTGGCTGTTCAGGAGTCACACTGGAC...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | GATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGCTTGGCCGAGGATCCCATTCCTaGTCCTTGTGGTTGGGAATT | + |
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Preference number: 4 (lower is better) Translates to: DKSIVSVRSWDVRLDQLGRGSHS*SLWLGI Trigger: AATTCCCAACCACAAGGATCAGGAATGGGATCCTCG...GCCAAGCTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | TGTATGATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATAGTCCTTCTGTTGCAGTaGCATGATGACTTTATGGCC | + |
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Preference number: 4 (lower is better) Translates to: CMISRWDCHLPCPAAGGIVLLLQ*HDDFMA Trigger: GGCCATAAAGTCATCATGTCACTGCAACAGAAGGAC...TATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATCATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR TCA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTACTTTGAAGCTGATGTaGCCTTGCTTGACTTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGTLKLM*PCLTLA Trigger: TGCCAAAGTCAAGCAAGGTCACATCAGCTTCAAAGT...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR GCA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTCTGATTCCAGCTCCTTaGGGCCAAAAACAGGATTAT | + |
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Preference number: 4 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGLIPAP*GQKQDY Trigger: ATAATCCTGTTTTTGGCCGCAAGGAGCTGGAATCAG...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CCA 90 bp | GATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATGGGATTGTCACCTCCCCCCCTGGATCAGCTGGTaGTTGCTGATGTTGCCCACA | + |
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Preference number: 4 (lower is better) Translates to: DLFSVNVCMISRWDCHLPPWISW*LLMLPT Trigger: TGTGGGCAACATCAGCAACCACCAGCTGATCCAGGG...GGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAAAGATC 50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CCA 90 bp | TGGGCCTTGAATAGGGGCAGAATACTGATAGATGAGGATGAAGGGAAGAACATACTGCCCTGGATCAGCTaGTGGTTGCTGATGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: WALNRGRILIDEDEGKNILPWIS*WLLMLP Trigger: GGGCAACATCAGCAACCACCAGCTGATCCAGGGCAG...TATGTTCTTCCCTTCATCCTCATCTATCAGTATTCTGCCCCTATTCAAGGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CCA 90 bp | ATGTCCACATTCTTGCTATTGTCCCATTTGAATCTCACCCCTGGAAGCCCTAAGTTCCCCAATCTGCCCTaGATCAGCTGGTGGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: MSTFLLLSHLNLTPGSPKFPNLP*ISWWLL Trigger: CAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAA...CTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACATTCTTGCTATTGTCCCATTTGAATCTCACCCCTGGAAGCCCTAAGGTCAGTTCCCTGAGCTaGACGGGCACTTCAGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: MSTFLLLSHLNLTPGSPKVSSLS*TGTSEK Trigger: CTTCTCTGAAGTGCCCGTCCAGCTCAGGGAACTGAC...CTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR GCA 90 bp | GATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATGGGATTGTCACCTCCCCCCATTCGGCGGTAAGTaGGTAGGTCCTTCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLFSVNVCMISRWDCHLPPFGGK*VGPSVA Trigger: TGCAACAGAAGGACCTACGCACTTACCGCCGAATGG...GGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAAAGATC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTTGAATAGGGGCAGAATACTGATAGATGAGGATGAAGGGAAGAACATAAGGCCCTCAGCACTGTaGACAGTGATCTGGGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: WALNRGRILIDEDEGKNIRPSAL*TVIWVT Trigger: GGTTACCCAGATCACTGTCCACAGTGCTGAGGGCCT...TATGTTCTTCCCTTCATCCTCATCTATCAGTATTCTGCCCCTATTCAAGGCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTCTGCTGTTCCACACCTaGATGATAATAGGAATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGLLFHT*MIIGMS Trigger: TGACATTCCTATTATCATCCAGGTGTGGAACAGCAG...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR GCA 90 bp | GATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATGGGATTGTCACCTCCCCCTCCGAGACGGAGCTTaGGAATATCAGTCATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DLFSVNVCMISRWDCHLPLRDGA*EYQSWC Trigger: ACACCATGACTGATATTCGCAAGCTCCGTCTCGGAG...GGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAAAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | TTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTAAAATGTGACATGATGACTTTATaGCCATCCTCGGGCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LALITSVLLHQQALQVKCDMMTL*PSSGTV Trigger: CACTGTGCCCGAGGATGGCCATAAAGTCATCATGTC...ACATTTTACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | GATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATGGGATTGTCACCTCCCCCTGGTACGGCCATGTTaGAACATGGTTGGAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DLFSVNVCMISRWDCHLPLVRPC*NMVGTS Trigger: GCTTGTTCCAACCATGTTCCAACATGGCCGTACCAG...GGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAAAGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | TCTGTCCTCCTTCATCAACAAGCCCTACAGGTAAAATGTGTTAGGCAGGTGGAATGCACAGTATTCTTCTaGACAGGGGAACGGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVLLHQQALQVKCVRQVECTVFF*TGERTS Trigger: GGAAGTCCGTTCCCCTGTCCAGAAGAATACTGTGCA...TTCCACCTGCCTAACACATTTTACCTGTAGGGCTTGTTGATGAAGGAGGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR TCA 90 bp | ACCCCTGGAAGCCCTAAGGATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGAGGTACTTCTGGTTTTTaGAGAGCTTCAGAGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSPKDLFSVNVCMISRGTSGF*RASEED Trigger: GTCCTCCTCTGAAGCTCTTCAAAAACCAGAAGTACC...TCTGGAGATCATACACACGTTTACTGAGAAAAGATCCTTAGGGCTTCCAGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR TCA 90 bp | GTGGCTGATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGTTAGACCTCCTTTGGTaGACGTTTTGTACAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VADKSIVSVRSWDVRLDQLDLLW*TFCTVL Trigger: GAGAACTGTACAAAACGTTCACCAAAGGAGGTCTAA...CTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATCAGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR GCA 90 bp | GTGGCTGATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGCAAGTCCTAGGTTCTTaGGATCTGTTACAGTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VADKSIVSVRSWDVRLDQQVLGS*DLLQSV Trigger: AACTGACTGTAACAGATCGCAAGAACCTAGGACTTG...CTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATCAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR GCA 90 bp | TGTATGATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATAGTGTCAAAAATGGCATaGACAGTATTCTTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: CMISRWDCHLPCPAAGGIVSKMA*TVFFWT Trigger: TGTCCAGAAGAATACTGTGCATGCCATTTTTGACAC...TATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATCATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | GACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTAGTTCTTGGTACTTCTaGTTTTTGAAGAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DQLGLDHLCPPSSTSPTGSSWYF*FLKSFR Trigger: TCTGAAGCTCTTCAAAAACCAGAAGTACCAAGAACT...ACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGGAAGCCCTAAGGATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATCCAGCGTATTTCTCTaGCTTTCGAGGATCCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSPKDLFSVNVCMISRSSVFL*LSRIPF Trigger: GAATGGGATCCTCGAAAGCCAGAGAAATACGCTGGA...TCTGGAGATCATACACACGTTTACTGAGAAAAGATCCTTAGGGCTTCCAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | ACCCCTGGAAGCCCTAAGGATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGAATGTTGGAACATGGTTaGAACAAGCACGTAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TPGSPKDLFSVNVCMISRMLEHG*NKHVAA Trigger: GGCAGCTACGTGCTTGTTCCAACCATGTTCCAACAT...TCTGGAGATCATACACACGTTTACTGAGAAAAGATCCTTAGGGCTTCCAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| 3UTR CAA 72 bp | TTTCTCAGTAAACGTGTGTATGATCTCCAGATGGGATaGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATA | + |
|
Preference number: 4 (lower is better) Translates to: FLSKRVYDLQMG*SPPLSSCWRYI Trigger: TATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | GACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTTTTGATGATCAGATATaGATTGACAGTTTCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DQLGLDHLCPPSSTSPTGFDDQI*IDSFIG Trigger: GCCAATGAAACTGTCAATCCATATCTGATCATCAAA...ACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| 3UTR CAA 72 bp | AGCAAACACACATGTAGGATGTCCACATTCTTGCTATaGTCCCATTTGAATCTCACCCCTGGAAGCCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKHTCRMSTFLL*SHLNLTPGSPK Trigger: CTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACATCCTACATGTGTGTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR TCA 90 bp | TGGGCCTTGAATAGGGGCAGAATACTGATAGATGAGGATGAAGGGAAGAACATACAGGAAGCAGCCGGTTaGAAAACAGAGAATCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: WALNRGRILIDEDEGKNIQEAAG*KTENHS Trigger: AGAATGATTCTCTGTTTTTCAACCGGCTGCTTCCTG...TATGTTCTTCCCTTCATCCTCATCTATCAGTATTCTGCCCCTATTCAAGGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR TCA 90 bp | GATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATGGGATTGTCACCTCCCCACAGCTTCTCAGTACTaGAGACTTCCACAAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLFSVNVCMISRWDCHLPTASQY*RLPQVF Trigger: AAAGACTTGTGGAAGTCTTCAGTACTGAGAAGCTGT...GGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR GCA 90 bp | GTTAGGCAGGTGGAAACAGCAAACACACATGTAGGATGTCCACATTCTTGCTATTCCTTCATGCACTCCTaGTTCAGTTCTTGGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VRQVETANTHVGCPHSCYSFMHS*FSSWYF Trigger: GAAGTACCAAGAACTGAAGCAGGAGTGCATGAAGGA...ATAGCAAGAATGTGGACATCCTACATGTGTGTTTGCTGTTTCCACCTGCCTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTAAAATGTTCTGTTACAGTCAGTTaGTGCCACTCCTCTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LALITSVLLHQQALQVKCSVTVS*CHSSEI Trigger: AATTTCAGAGGAGTGGCAGCAACTGACTGTAACAGA...ACATTTTACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACATTCTTGCTATTGTCCCATTTGAATCTCACCCCTGGAAGCCCTAAGCCTGCGTGTCAAAAATaGCATGCACAGTATTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MSTFLLLSHLNLTPGSPKPACQK*HAQYSS Trigger: AGAAGAATACTGTGCATGCCATTTTTGACACGCAGG...CTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| 3UTR CAA 72 bp | ACATGTAGGATGTCCACATTCTTGCTATTGTCCCATTaGAATCTCACCCCTGGAAGCCCTAAGGATCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TCRMSTFLLLSH*NLTPGSPKDLF Trigger: GAAAAGATCCTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACATCCTACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR GCA 90 bp | TTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTAAAATGTCAGGATTATTCACATTaGGGCAGACATTCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LALITSVLLHQQALQVKCQDYSH*GRHSVC Trigger: ACAAACTGAATGTCTGCCGCAATGTGAATAATCCTG...ACATTTTACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR GCA 90 bp | GTTAGGCAGGTGGAAACAGCAAACACACATGTAGGATGTCCACATTCTTGCTATCGTAGGTCCTTCTGTTaGAGTGACATGATGACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VRQVETANTHVGCPHSCYRRSFC*SDMMTL Trigger: TAAAGTCATCATGTCACTGCAACAGAAGGACCTACG...ATAGCAAGAATGTGGACATCCTACATGTGTGTTTGCTGTTTCCACCTGCCTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | ATGTCCACATTCTTGCTATTGTCCCATTTGAATCTCACCCCTGGAAGCCCTAAGTGCGAATATCAGTCATaGTGTAGGTATAACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSTFLLLSHLNLTPGSPKCEYQS*CRYNPS Trigger: TGAAGGGTTATACCTACACCATGACTGATATTCGCA...CTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| 3UTR CAA 72 bp | TGGAATTTCAGTAATCGTGGGGTCTTAGTTAAGACCTaGTGCCTGACAAAAGAAGATGGAAAGCTGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WNFSNRGVLVKT*CLTKEDGKLSG Trigger: TCCTGACAGCTTTCCATCTTCTTTTGTCAGGCACAAGGTCTTAACTAAGACCCCACGATTACTGAAATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | TGGGCCTTGAATAGGGGCAGAATACTGATAGATGAGGATGAAGGGAAGAACATATCCTGCTTCAGTTCTTaGTACTTCTGGTTTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WALNRGRILIDEDEGKNISCFSS*YFWFLK Trigger: CTTCAAAAACCAGAAGTACCAAGAACTGAAGCAGGA...TATGTTCTTCCCTTCATCCTCATCTATCAGTATTCTGCCCCTATTCAAGGCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CCA 90 bp | GTTAGGCAGGTGGAAACAGCAAACACACATGTAGGATGTCCACATTCTTGCTATTCCAAAACTCATTCATaGAGGTGGAGAATGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRQVETANTHVGCPHSCYSKTHS*RWRMRR Trigger: TCTTCTCATTCTCCACCTCCATGAATGAGTTTTGGA...ATAGCAAGAATGTGGACATCCTACATGTGTGTTTGCTGTTTCCACCTGCCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS CCA 90 bp | CTCCAGGCCCTCAGCACTGTGGACAGTGATCTGGGTAACCACCTTTaGGTAGCCACGTGCCAGGTTCCAGCAAGACATCTTGGGCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LQALSTVDSDLGNHL*VATCQVPARHLGHV Trigger: GACATGCCCAAGATGTCTTGCTGGAACCTGGCACGTGGCTACCCAAAGGTGGTTACCCAGATCACTGTCCACAGTGCTGAGGGCCTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS CCA 90 bp | CTGCCCTGGATCAGCTGGTGGTTGCTGATGTTGCCCACAATCAGGTaGGGGTCATCAGAAATGTCCTGTGGACGCTTCCACACCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LPWISWWLLMLPTIR*GSSEMSCGRFHTTF Trigger: GAAGGTGGTGTGGAAGCGTCCACAGGACATTTCTGATGACCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS GCA 90 bp | AGCACTGTGGACAGTGATCTGGGTAACCACCTTTGGGTAGCCACGTaGCAGGTTCCAGCAAGACATCTTGGGCATGTCCAAGGTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STVDSDLGNHLWVAT*QVPARHLGHVQGQF Trigger: GAACTGACCTTGGACATGCCCAAGATGTCTTGCTGGAACCTGGCACGTGGCTACCCAAAGGTGGTTACCCAGATCACTGTCCACAGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CAA 90 bp | TGTATGATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATGGTGGTTGCTGATGTaGCCCACAATCAGGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: CMISRWDCHLPCPAAGGIWWLLM*PTIRWG Trigger: CCCCCACCTGATTGTGGGCAACATCAGCAACCACCA...TATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATCATACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CAA 90 bp | GACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTGCAGAGATCATTGCCTaGTTCCCCAATCTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DQLGLDHLCPPSSTSPTGAEIIA*FPNLPW Trigger: CCAGGGCAGATTGGGGAACAAGGCAATGATCTCTGC...ACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS TCA 90 bp | TGTCCTGTGGACGCTTCCACACCACCTTCCCAGGAAGCAGCCGGTTaGAAAACAGAGAATCATTCTCCGGTAGGAAGGTTGGGTCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CPVDASTPPSQEAAG*KTENHSPVGRLGHR Trigger: TCTGTGACCCAACCTTCCTACCGGAGAATGATTCTCTGTTTTTCAACCGGCTGCTTCCTGGGAAGGTGGTGTGGAAGCGTCCACAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS TCA 90 bp | TCATTGCCTTGTTCCCCAATCTGCCCTGGATCAGCTGGTGGTTGCTaGTGTTGCCCACAATCAGGTGGGGGTCATCAGAAATGTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPCSPICPGSAGGC*CCPQSGGGHQKCPV Trigger: CACAGGACATTTCTGATGACCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGGCAATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS CCA 90 bp | GCAGAGATCATTGCCTTGTTCCCCAATCTGCCCTGGATCAGCTGGTaGTTGCTGATGTTGCCCACAATCAGGTGGGGGTCATCAGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: AEIIALFPNLPWISW*LLMLPTIRWGSSEM Trigger: CATTTCTGATGACCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGGCAATGATCTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CAA 90 bp | GATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGCTTGGCTCTCCGGTAGGAAGGTaGGGTCACAGAAAAGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: DKSIVSVRSWDVRLDQLGSPVGR*GHRKGG Trigger: GCCGCCTTTTCTGTGACCCAACCTTCCTACCGGAGA...GCCAAGCTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CAA 90 bp | GACCAGCTTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTTCTCCGAGACGGAGCTaGCGAATATCAGTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DQLGLDHLCPPSSTSPTGSPRRS*RISVMV Trigger: CACCATGACTGATATTCGCAAGCTCCGTCTCGGAGA...ACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAAGCTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS CCA 90 bp | AATGCAGAGATCATTGCCTTGTTCCCCAATCTGCCCTGGATCAGCTaGTGGTTGCTGATGTTGCCCACAATCAGGTGGGGGTCATCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: NAEIIALFPNLPWIS*WLLMLPTIRWGSSE Trigger: TTCTGATGACCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGGCAATGATCTCTGCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS CCA 90 bp | AAACAGGAAAATGCAGAGATCATTGCCTTGTTCCCCAATCTGCCCTaGATCAGCTGGTGGTTGCTGATGTTGCCCACAATCAGGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KQENAEIIALFPNLP*ISWWLLMLPTIRWG Trigger: CCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGGCAATGATCTCTGCATTTTCCTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CAA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTGAAGCTGATGTGACCTaGCTTGACTTTGGCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGEADVT*LDFGSR Trigger: CCTACTGCCAAAGTCAAGCAAGGTCACATCAGCTTC...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS GCA 90 bp | CACTGGTACGGCCATGTTGGAACATGGTTGGAACAAGCACGTAGCTaGCCTTCTTCAGATACTTGCTCAGAAACACAGTACGGGTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: HWYGHVGTWLEQARS*PSSDTCSETQYGCR Trigger: TCGACACCCGTACTGTGTTTCTGAGCAAGTATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAACCATGTTCCAACATGGCCGTACCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS-3UTR CAA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATCCTTGTGGTTGGGAATaGCCTTTGTCCAGTGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: QLASQLLKLKPFSLSQPHPCGWE*PLSSVT Trigger: AGTCACACTGGACAAAGGCAATTCCCAACCACAAGG...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATAAGACCAGATCTCCGTaGATGGTGGGAAGCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLASQLLKLKPFSLSQPHKTRSP*MVGSKS Trigger: TGACTTGCTTCCCACCATCAACGGAGATCTGGTCTT...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 90 bp | TCGGTTCATCAGAGGGTCATCATCCACAGTCCAACATCCCACCACTaGTTCCAGCTCCTTGCGGCCAAAAACAGGATTATTCACATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SVHQRVIIHSPTSHH*FQLLAAKNRIIHIA Trigger: CGCAATGTGAATAATCCTGTTTTTGGCCGCAAGGAGCTGGAATCAGTGGTGGGATGTTGGACTGTGGATGATGACCCTCTGATGAACCGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | TGTATGATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATAACTGATTCCAGCTCCTaGCGGCCAAAAACAGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: CMISRWDCHLPCPAAGGITDSSS*RPKTGL Trigger: TAATCCTGTTTTTGGCCGCAAGGAGCTGGAATCAGT...TATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATCATACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTGGATTGACAGTTTCATaGGCATACTTCTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGGLTVS*AYFFSR Trigger: CCTGGAGAAGAAGTATGCCAATGAAACTGTCAATCC...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 90 bp | TCAATCACCACCTCGGTCCATTCTCCAAAATGCCAGAAGCGGAAGTaGAAGATTCCAGCGTATTTCTCTGGCTTTCGAGGATCCCATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SITTSVHSPKCQKRK*KIPAYFSGFRGSHS Trigger: GGAATGGGATCCTCGAAAGCCAGAGAAATACGCTGGAATCTTTCACTTCCGCTTCTGGCATTTTGGAGAATGGACCGAGGTGGTGATTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 90 bp | AGGAAGGTTGGGTCACAGAAAAGGCGGCCATCCTTCATGCACTCCTaGTTCAGTTCTTGGTACTTCTGGTTTTTGAAGAGCTTCAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKVGSQKRRPSFMHS*FSSWYFWFLKSFRG Trigger: TCCTCTGAAGCTCTTCAAAAACCAGAAGTACCAAGAACTGAAGCAGGAGTGCATGAAGGATGGCCGCCTTTTCTGTGACCCAACCTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 90 bp | GGTCATCATCCACAGTCCAACATCCCACCACTGATTCCAGCTCCTTaGGGCCAAAAACAGGATTATTCACATTGCGGCAGACATTCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GHHPQSNIPPLIPAP*GQKQDYSHCGRHSV Trigger: AACTGAATGTCTGCCGCAATGTGAATAATCCTGTTTTTGGCCGCAAGGAGCTGGAATCAGTGGTGGGATGTTGGACTGTGGATGATGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 90 bp | GGAACATGGTTGGAACAAGCACGTAGCTGCCCTTCTTCAGATACTTaGTCAGAAACACAGTACGGGTGTCGATATAAGTGGAAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GTWLEQARSCPSSDT*SETQYGCRYKWKSQ Trigger: CTGGGACTTCCACTTATATCGACACCCGTACTGTGTTTCTGAGCAAGTATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAACCATGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | ATGTCCACATTCTTGCTATTGTCCCATTTGAATCTCACCCCTGGAAGCCCTAAGTGGATCAGCTGGTGGTaGCTGATGTTGCCCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: MSTFLLLSHLNLTPGSPKWISWW*LMLPTI Trigger: GATTGTGGGCAACATCAGCAACCACCAGCTGATCCA...CTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | TGTATGATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATACCTTTGGTGAACGTTTaGTACAGTTCTCCAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CMISRWDCHLPCPAAGGIPLVNV*YSSPNS Trigger: GCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGG...TATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATCATACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | GTGGCTGATAAATCCATAGTGTCAGTTAGGAGCTGGGATGTCAGGCTAGACCAGCCCTTCTTCAGATACTaGCTCAGAAACACAGTACGG | + |
|
Preference number: 5 (lower is better) Translates to: VADKSIVSVRSWDVRLDQPFFRY*LRNTVR Trigger: CCGTACTGTGTTTCTGAGCAAGTATCTGAAGAAGGG...CTGGTCTAGCCTGACATCCCAGCTCCTAACTGACACTATGGATTTATCAGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 90 bp | AAAACTCATTCATGGAGGTGGAGAATGAGAAGACCAGATCTCCGTTaGTGGTGGGAAGCAAGTCATCAATCACCACCTCGGTCCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KTHSWRWRMRRPDLR*WWEASHQSPPRSIL Trigger: GAGAATGGACCGAGGTGGTGATTGATGACTTGCTTCCCACCATCAACGGAGATCTGGTCTTCTCATTCTCCACCTCCATGAATGAGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 90 bp | GATCCTCAGCAGAAATTCACTGGTACGGCCATGTTGGAACATGGTTaGAACAAGCACGTAGCTGCCCTTCTTCAGATACTTGCTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DPQQKFTGTAMLEHG*NKHVAALLQILAQK Trigger: TTTCTGAGCAAGTATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAACCATGTTCCAACATGGCCGTACCAGTGAATTTCTGCTGAGGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 90 bp | AGAAGATCCTCAGCAGAAATTCACTGGTACGGCCATGTTGGAACATaGTTGGAACAAGCACGTAGCTGCCCTTCTTCAGATACTTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RRSSAEIHWYGHVGT*LEQARSCPSSDTCS Trigger: TGAGCAAGTATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAACCATGTTCCAACATGGCCGTACCAGTGAATTTCTGCTGAGGATCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | GATCTCCAGATGGGATTGTCACCTCCCCTGTCCAGCTGCTGGAGGTATATAGGTCAAATTAGACCTCCTTaGGTGAACGTTTTGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: DLQMGLSPPLSSCWRYIGQIRPP*VNVLYS Trigger: ACTGTACAAAACGTTCACCAAAGGAGGTCTAATTTG...ACCTATATACCTCCAGCAGCTGGACAGGGGAGGTGACAATCCCATCTGGAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | GATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATGGGATTGTCACCTCCCCGTCTGTTTCAACTTCTaGTTCCTCCTGGCTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: DLFSVNVCMISRWDCHLPVCFNF*FLLAGR Trigger: TCTCCCAGCCAGGAGGAACAAGAAGTTGAAACAGAC...GGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | ATGTCCACATTCTTGCTATTGTCCCATTTGAATCTCACCCCTGGAAGCCCTAAGCATGTTGGAACATGGTaGGAACAAGCACGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MSTFLLLSHLNLTPGSPKHVGTW*EQARSC Trigger: GCAGCTACGTGCTTGTTCCAACCATGTTCCAACATG...CTTAGGGCTTCCAGGGGTGAGATTCAAATGGGACAATAGCAAGAATGTGGACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | TTGGCCTTGATCACCTCTGTCCTCCTTCATCAACAAGCCCTACAGGTAAAATGTACTGGTACGGCCATGTaGGAACATGGTTGGAACAAG | + |
|
Preference number: 5 (lower is better) Translates to: LALITSVLLHQQALQVKCTGTAM*EHGWNK Trigger: CTTGTTCCAACCATGTTCCAACATGGCCGTACCAGT...ACATTTTACCTGTAGGGCTTGTTGATGAAGGAGGACAGAGGTGATCAAGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | TCTGTCCTCCTTCATCAACAAGCCCTACAGGTAAAATGTGTTAGGCAGGTGGAATTCCAGCAAGACATCTaGGGCATGTCCAAGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVLLHQQALQVKCVRQVEFQQDI*GMSKVS Trigger: ACTGACCTTGGACATGCCCAAGATGTCTTGCTGGAA...TTCCACCTGCCTAACACATTTTACCTGTAGGGCTTGTTGATGAAGGAGGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 90 bp | CCTGGCTGGGAGACTCAATGGAGCAGCAAATTAGACCTCCTTTGGTaGACGTTTTGTACAGTTCTCCAAACAGCTTGTACTTCTCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PGWETQWSSKLDLLW*TFCTVLQTACTSPQ Trigger: TTGAGGAGAAGTACAAGCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGGAGGTCTAATTTGCTGCTCCATTGAGTCTCCCAGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 90 bp | TTCCCAATGGGTTCCTTAGGCGAACCATATACAGCTTCTCAGTACTaGAGACTTCCACAAGTCTTTCTCCGAGACGGAGCTTGCGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: FPMGSLGEPYTASQY*RLPQVFLRDGACEY Trigger: ATATTCGCAAGCTCCGTCTCGGAGAAAGACTTGTGGAAGTCTTCAGTACTGAGAAGCTGTATATGGTTCGCCTAAGGAACCCATTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 90 bp | CTTCCACAAGTCTTTCTCCGAGACGGAGCTTGCGAATATCAGTCATaGTGTAGGTATAACCCTTCAGTAGTCCCCAGTCTGTTTCAACTT | + |
|
Preference number: 5 (lower is better) Translates to: LPQVFLRDGACEYQS*CRYNPSVVPSLFQL Trigger: AAGTTGAAACAGACTGGGGACTACTGAAGGGTTATACCTACACCATGACTGATATTCGCAAGCTCCGTCTCGGAGAAAGACTTGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 90 bp | TCTTCAGATACTTGCTCAGAAACACAGTACGGGTGTCGATATAAGTaGAAGTCCCAGCACGCTCCTGAATATACAGATGGTGAAGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSDTCSETQYGCRYK*KSQHAPEYTDGEDG Trigger: TCCGTCTTCACCATCTGTATATTCAGGAGCGTGCTGGGACTTCCACTTATATCGACACCCGTACTGTGTTTCTGAGCAAGTATCTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | ACCCCTGGAAGCCCTAAGGATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGACGGTTCATCTCCACCTaGAAGAGCTCAAAACCAATG | + |
|
Preference number: 5 (lower is better) Translates to: TPGSPKDLFSVNVCMISRRFIST*KSSKPM Trigger: CATTGGTTTTGAGCTCTTCAAGGTGGAGATGAACCG...TCTGGAGATCATACACACGTTTACTGAGAAAAGATCCTTAGGGCTTCCAGGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | CAGCTGGCTTCCCAATTGCTAAAGCTCAAGCCTTTCTCACTGTCTCAGCCGCATATGATCAGATATGGATaGACAGTTTCATTGGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: QLASQLLKLKPFSLSQPHMIRYG*TVSLAY Trigger: GTATGCCAATGAAACTGTCAATCCATATCTGATCAT...ATGCGGCTGAGACAGTGAGAAAGGCTTGAGCTTTAGCAATTGGGAAGCCAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 90 bp | AACAGCTTGTACTTCTCCTCAACAAGATCAGTGTATCGTCCTTTCTaGATGTCAATGATTTCAGCCAGTGTGCCAGTGAAGTCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: NSLYFSSTRSVYRPF*MSMISASVPVKSMM Trigger: CATCATGGACTTCACTGGCACACTGGCTGAAATCATTGACATGCAGAAAGGACGATACACTGATCTTGTTGAGGAGAAGTACAAGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 90 bp | CCACTGATTCCAGCTCCTTGCGGCCAAAAACAGGATTATTCACATTaGGGCAGACATTCAGTTTGTGAAAGTTGTGGCAAAAATCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLIPAPCGQKQDYSH*GRHSVCESCGKNLP Trigger: TGGAAGATTTTTGCCACAACTTTCACAAACTGAATGTCTGCCGCAATGTGAATAATCCTGTTTTTGGCCGCAAGGAGCTGGAATCAGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | TGGGCCTTGAATAGGGGCAGAATACTGATAGATGAGGATGAAGGGAAGAACATAAAAATGCAGAGATCATaGCCTTGTTCCCCAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: WALNRGRILIDEDEGKNIKMQRS*PCSPIC Trigger: GCAGATTGGGGAACAAGGCAATGATCTCTGCATTTT...TATGTTCTTCCCTTCATCCTCATCTATCAGTATTCTGCCCCTATTCAAGGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS-3UTR CAA 90 bp | GATCTTTTCTCAGTAAACGTGTGTATGATCTCCAGATGGGATTGTCACCTCCCCACAGGATTATTCACATaGCGGCAGACATTCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DLFSVNVCMISRWDCHLPTGLFT*RQTFSL Trigger: CAAACTGAATGTCTGCCGCAATGTGAATAATCCTGT...GGGGAGGTGACAATCCCATCTGGAGATCATACACACGTTTACTGAGAAAAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | GCCTTGTTCCCCAATCTGCCCTGGATCAGCTGGTGGTTGCTGATGTaGCCCACAATCAGGTGGGGGTCATCAGAAATGTCCTGTGGACGC | + |
|
Preference number: 6 (lower is better) Translates to: ALFPNLPWISWWLLM*PTIRWGSSEMSCGR Trigger: GCGTCCACAGGACATTTCTGATGACCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | ATCATTGCCTTGTTCCCCAATCTGCCCTGGATCAGCTaGTGGTTGCTGATGTTGCCCACAATCAGGTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: IIALFPNLPWIS*WLLMLPTIRWG Trigger: CCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGGCAATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | ATCAGCTGGTGGTTGCTGATGTTGCCCACAATCAGGTaGGGGTCATCAGAAATGTCCTGTGGACGCTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ISWWLLMLPTIR*GSSEMSCGRFH Trigger: GTGGAAGCGTCCACAGGACATTTCTGATGACCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | CTCAGCACTGTGGACAGTGATCTGGGTAACCACCTTTaGGTAGCCACGTGCCAGGTTCCAGCAAGACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSTVDSDLGNHL*VATCQVPARHL Trigger: AAGATGTCTTGCTGGAACCTGGCACGTGGCTACCCAAAGGTGGTTACCCAGATCACTGTCCACAGTGCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | ATGTCCTGTGGACGCTTCCACACCACCTTCCCAGGAAGCAGCCGGTaGAAAAACAGAGAATCATTCTCCGGTAGGAAGGTTGGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: MSCGRFHTTFPGSSR*KNRESFSGRKVGSQ Trigger: CTGTGACCCAACCTTCCTACCGGAGAATGATTCTCTGTTTTTCAACCGGCTGCTTCCTGGGAAGGTGGTGTGGAAGCGTCCACAGGACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | GAGATCATTGCCTTGTTCCCCAATCTGCCCTGGATCAGCTGGTGGTaGCTGATGTTGCCCACAATCAGGTGGGGGTCATCAGAAATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EIIALFPNLPWISWW*LMLPTIRWGSSEMS Trigger: GGACATTTCTGATGACCCCCACCTGATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGGCAATGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 72 bp | TCATGGAGGTGGAGAATGAGAAGACCAGATCTCCGTTaGTGGTGGGAAGCAAGTCATCAATCACCACCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SWRWRMRRPDLR*WWEASHQSPPR Trigger: CCGAGGTGGTGATTGATGACTTGCTTCCCACCATCAACGGAGATCTGGTCTTCTCATTCTCCACCTCCATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 72 bp | AGTCCTAGGTTCTTGCGATCTGTTACAGTCAGTTGCTaGCACTCCTCTGAAATTTCACTCCAGGGGCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SPRFLRSVTVSC*HSSEISLQGPL Trigger: GAGTGGCCCCTGGAGTGAAATTTCAGAGGAGTGGCAGCAACTGACTGTAACAGATCGCAAGAACCTAGGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | AATGCAGAGATCATTGCCTTGTTCCCCAATCTGCCCTaGATCAGCTGGTGGTTGCTGATGTTGCCCACAATC | + |
|
Preference number: 6 (lower is better) Translates to: NAEIIALFPNLP*ISWWLLMLPTI Trigger: GATTGTGGGCAACATCAGCAACCACCAGCTGATCCAGGGCAGATTGGGGAACAAGGCAATGATCTCTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | GGGTCATCATCCACAGTCCAACATCCCACCACTGATTCCAGCTCCTaGCGGCCAAAAACAGGATTATTCACATTGCGGCAGACATTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSSSTVQHPTTDSSS*RPKTGLFTLRQTFS Trigger: ACTGAATGTCTGCCGCAATGTGAATAATCCTGTTTTTGGCCGCAAGGAGCTGGAATCAGTGGTGGGATGTTGGACTGTGGATGATGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 72 bp | CAGAGGGTCATCATCCACAGTCCAACATCCCACCACTaGTTCCAGCTCCTTGCGGCCAAAAACAGGATTATT | + |
|
Preference number: 6 (lower is better) Translates to: QRVIIHSPTSHH*FQLLAAKNRII Trigger: AATAATCCTGTTTTTGGCCGCAAGGAGCTGGAATCAGTGGTGGGATGTTGGACTGTGGATGATGACCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 72 bp | ACAAGTCCTAGGTTCTTGCGATCTGTTACAGTCAGTTaGTGCCACTCCTCTGAAATTTCACTCCAGGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSPRFLRSVTVS*CHSSEISLQGP Trigger: TGGCCCCTGGAGTGAAATTTCAGAGGAGTGGCAGCAACTGACTGTAACAGATCGCAAGAACCTAGGACTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | GTCCCCAGTCTGTTTCAACTTCTTGTTCCTCCTGGCTaGGAGACTCAATGGAGCAGCAAATTAGACCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VPSLFQLLVPPG*ETQWSSKLDLL Trigger: AAGGAGGTCTAATTTGCTGCTCCATTGAGTCTCCCAGCCAGGAGGAACAAGAAGTTGAAACAGACTGGGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | GTCTTTCTCCGAGACGGAGCTTGCGAATATCAGTCATaGTGTAGGTATAACCCTTCAGTAGTCCCCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VFLRDGACEYQS*CRYNPSVVPSL Trigger: CAGACTGGGGACTACTGAAGGGTTATACCTACACCATGACTGATATTCGCAAGCTCCGTCTCGGAGAAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS CCA 72 bp | CGGGCACTTCAGAGAAGATCCTCAGCAGAAATTCACTaGTACGGCCATGTTGGAACATGGTTGGAACAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RALQRRSSAEIH*YGHVGTWLEQA Trigger: TGCTTGTTCCAACCATGTTCCAACATGGCCGTACCAGTGAATTTCTGCTGAGGATCTTCTCTGAAGTGCCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS CCA 72 bp | GCCTGCGTGTCAAAAATGGCATGCACAGTATTCTTCTaGACAGGGGAACGGACTTCCTCCTTTCCACATTTG | + |
|
Preference number: 6 (lower is better) Translates to: ACVSKMACTVFF*TGERTSSFPHL Trigger: CAAATGTGGAAAGGAGGAAGTCCGTTCCCCTGTCCAGAAGAATACTGTGCATGCCATTTTTGACACGCAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS CAA 72 bp | TTCATGGAGGTGGAGAATGAGAAGACCAGATCTCCGTaGATGGTGGGAAGCAAGTCATCAATCACCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: FMEVENEKTRSP*MVGSKSSITTS Trigger: CGAGGTGGTGATTGATGACTTGCTTCCCACCATCAACGGAGATCTGGTCTTCTCATTCTCCACCTCCATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
||
| CDS TCA 72 bp | ACCTCGGTCCATTCTCCAAAATGCCAGAAGCGGAAGTaGAAGATTCCAGCGTATTTCTCTGGCTTTCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TSVHSPKCQKRK*KIPAYFSGFRG Trigger: TCCTCGAAAGCCAGAGAAATACGCTGGAATCTTTCACTTCCGCTTCTGGCATTTTGGAGAATGGACCGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 72 bp | GGTTCCTTAGGCGAACCATATACAGCTTCTCAGTACTaGAGACTTCCACAAGTCTTTCTCCGAGACGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: GSLGEPYTASQY*RLPQVFLRDGA Trigger: AGCTCCGTCTCGGAGAAAGACTTGTGGAAGTCTTCAGTACTGAGAAGCTGTATATGGTTCGCCTAAGGAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | AGTAGTCCCCAGTCTGTTTCAACTTCTTGTTCCTCCTaGCTGGGAGACTCAATGGAGCAGCAAATTAGACCT | + |
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Preference number: 6 (lower is better) Translates to: SSPQSVSTSCSS*LGDSMEQQIRP Trigger: AGGTCTAATTTGCTGCTCCATTGAGTCTCCCAGCCAGGAGGAACAAGAAGTTGAAACAGACTGGGGACTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | TCAGCAGAAATTCACTGGTACGGCCATGTTGGAACATaGTTGGAACAAGCACGTAGCTGCCCTTCTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: SAEIHWYGHVGT*LEQARSCPSSD Trigger: ATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAACCATGTTCCAACATGGCCGTACCAGTGAATTTCTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 72 bp | GCAGAAATTCACTGGTACGGCCATGTTGGAACATGGTaGGAACAAGCACGTAGCTGCCCTTCTTCAGATACT | + |
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Preference number: 6 (lower is better) Translates to: AEIHWYGHVGTW*EQARSCPSSDT Trigger: AGTATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAACCATGTTCCAACATGGCCGTACCAGTGAATTTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | CAAAACTCATTCATGGAGGTGGAGAATGAGAAGACCAGATCTCCGTaGATGGTGGGAAGCAAGTCATCAATCACCACCTCGGTCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: QNSFMEVENEKTRSP*MVGSKSSITTSVHS Trigger: AGAATGGACCGAGGTGGTGATTGATGACTTGCTTCCCACCATCAACGGAGATCTGGTCTTCTCATTCTCCACCTCCATGAATGAGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | TCCTCCTGGCTGGGAGACTCAATGGAGCAGCAAATTAGACCTCCTTaGGTGAACGTTTTGTACAGTTCTCCAAACAGCTTGTACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSWLGDSMEQQIRPP*VNVLYSSPNSLYFS Trigger: GGAGAAGTACAAGCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGGAGGTCTAATTTGCTGCTCCATTGAGTCTCCCAGCCAGGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | AGATCCTCAGCAGAAATTCACTGGTACGGCCATGTTGGAACATGGTaGGAACAAGCACGTAGCTGCCCTTCTTCAGATACTTGCTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: RSSAEIHWYGHVGTW*EQARSCPSSDTCSE Trigger: TTCTGAGCAAGTATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAACCATGTTCCAACATGGCCGTACCAGTGAATTTCTGCTGAGGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 72 bp | TTGTGGTTGGGAATTGCCTTTGTCCAGTGTGACTCCTaGACAGCCAAACAGGAAAATGCAGAGATCATTGCC | + |
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Preference number: 6 (lower is better) Translates to: LWLGIAFVQCDS*TAKQENAEIIA Trigger: GGCAATGATCTCTGCATTTTCCTGTTTGGCTGTTCAGGAGTCACACTGGACAAAGGCAATTCCCAACCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 72 bp | CTGATCCTTGTGGTTGGGAATTGCCTTTGTCCAGTGTaGCTCCTGAACAGCCAAACAGGAAAATGCAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: LILVVGNCLCPV*LLNSQTGKCRD Trigger: ATCTCTGCATTTTCCTGTTTGGCTGTTCAGGAGTCACACTGGACAAAGGCAATTCCCAACCACAAGGATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 72 bp | TTGGAACAAGCACGTAGCTGCCCTTCTTCAGATACTTaGTCAGAAACACAGTACGGGTGTCGATATAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LEQARSCPSSDT*SETQYGCRYKW Trigger: CCACTTATATCGACACCCGTACTGTGTTTCTGAGCAAGTATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | ACTTGCTCAGAAACACAGTACGGGTGTCGATATAAGTaGAAGTCCCAGCACGCTCCTGAATATACAGATGGT | + |
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Preference number: 6 (lower is better) Translates to: TCSETQYGCRYK*KSQHAPEYTDG Trigger: ACCATCTGTATATTCAGGAGCGTGCTGGGACTTCCACTTATATCGACACCCGTACTGTGTTTCTGAGCAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CCA 72 bp | CAGAAATTCACTGGTACGGCCATGTTGGAACATGGTTaGAACAAGCACGTAGCTGCCCTTCTTCAGATACTT | + |
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Preference number: 6 (lower is better) Translates to: QKFTGTAMLEHG*NKHVAALLQIL Trigger: AAGTATCTGAAGAAGGGCAGCTACGTGCTTGTTCCAACCATGTTCCAACATGGCCGTACCAGTGAATTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 72 bp | CCAGCTCCTTGCGGCCAAAAACAGGATTATTCACATTaGGGCAGACATTCAGTTTGTGAAAGTTGTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: PAPCGQKQDYSH*GRHSVCESCGK Trigger: TTTGCCACAACTTTCACAAACTGAATGTCTGCCGCAATGTGAATAATCCTGTTTTTGGCCGCAAGGAGCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 72 bp | CTGGGAGACTCAATGGAGCAGCAAATTAGACCTCCTTaGGTGAACGTTTTGTACAGTTCTCCAAACAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LGDSMEQQIRPP*VNVLYSSPNSL Trigger: CAAGCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGGAGGTCTAATTTGCTGCTCCATTGAGTCTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS GCA 72 bp | TACTTCTCCTCAACAAGATCAGTGTATCGTCCTTTCTaGATGTCAATGATTTCAGCCAGTGTGCCAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: YFSSTRSVYRPF*MSMISASVPVK Trigger: CTTCACTGGCACACTGGCTGAAATCATTGACATGCAGAAAGGACGATACACTGATCTTGTTGAGGAGAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 72 bp | AATTCTCCATCATCAGACATAACAAGTCCTAGGTTCTaGCGATCTGTTACAGTCAGTTGCTGCCACTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: NSPSSDITSPRF*RSVTVSCCHSS Trigger: AGAGGAGTGGCAGCAACTGACTGTAACAGATCGCAAGAACCTAGGACTTGTTATGTCTGATGATGGAGAATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | GGAGACTCAATGGAGCAGCAAATTAGACCTCCTTTGGTGAACGTTTaGTACAGTTCTCCAAACAGCTTGTACTTCTCCTCAACAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: GDSMEQQIRPPLVNV*YSSPNSLYFSSTRS Trigger: TGATCTTGTTGAGGAGAAGTACAAGCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGGAGGTCTAATTTGCTGCTCCATTGAGTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 72 bp | GAGACTCAATGGAGCAGCAAATTAGACCTCCTTTGGTaGACGTTTTGTACAGTTCTCCAAACAGCTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: ETQWSSKLDLLW*TFCTVLQTACT Trigger: AGTACAAGCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGGAGGTCTAATTTGCTGCTCCATTGAGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 72 bp | CCTTTGGTGAACGTTTTGTACAGTTCTCCAAACAGCTaGTACTTCTCCTCAACAAGATCAGTGTATCGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PLVNVLYSSPNS*YFSSTRSVYRP Trigger: AGGACGATACACTGATCTTGTTGAGGAGAAGTACAAGCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 72 bp | ATGGAGCAGCAAATTAGACCTCCTTTGGTGAACGTTTaGTACAGTTCTCCAAACAGCTTGTACTTCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: MEQQIRPPLVNV*YSSPNSLYFSS Trigger: TGAGGAGAAGTACAAGCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGGAGGTCTAATTTGCTGCTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | ATTAGACCTCCTTTGGTGAACGTTTTGTACAGTTCTCCAAACAGCTaGTACTTCTCCTCAACAAGATCAGTGTATCGTCCTTTCTGCATG | + |
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Preference number: 6 (lower is better) Translates to: IRPPLVNVLYSSPNS*YFSSTRSVYRPFCM Trigger: CATGCAGAAAGGACGATACACTGATCTTGTTGAGGAGAAGTACAAGCTGTTTGGAGAACTGTACAAAACGTTCACCAAAGGAGGTCTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | CTCATCCAAAATTCTCCATCATCAGACATAACAAGTCCTAGGTTCTaGCGATCTGTTACAGTCAGTTGCTGCCACTCCTCTGAAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: LIQNSPSSDITSPRF*RSVTVSCCHSSEIS Trigger: TGAAATTTCAGAGGAGTGGCAGCAACTGACTGTAACAGATCGCAAGAACCTAGGACTTGTTATGTCTGATGATGGAGAATTTTGGATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS CAA 90 bp | ACAGTATTCTTCTGGACAGGGGAACGGACTTCCTCCTTTCCACATTaGATGATCAGATATGGATTGACAGTTTCATTGGCATACTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: TVFFWTGERTSSFPH*MIRYGLTVSLAYFF Trigger: GAAGAAGTATGCCAATGAAACTGTCAATCCATATCTGATCATCAAATGTGGAAAGGAGGAAGTCCGTTCCCCTGTCCAGAAGAATACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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| CDS TCA 72 bp | ACAGGATTATTCACATTGCGGCAGACATTCAGTTTGTaGAAGTTGTGGCAAAAATCTTCCAGACTCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: TGLFTLRQTFSL*KLWQKSSRLIQ Trigger: TTGGATGAGTCTGGAAGATTTTTGCCACAACTTTCACAAACTGAATGTCTGCCGCAATGTGAATAATCCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087316.6 |
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