Pregenerated sensors for CAPN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035547Ensembl transcript IDs: ENSMUST00000040971.14, ENSMUST00000107112.2, ENSMUST00000155056.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGTGGACCGGGTCCCAGGCCAGAAGAGCCACCATGGAGCAAGATaGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGAGGACCACGTT | + |
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Preference number: 1 (lower is better) Translates to: PVDRVPGQKSHHGAR*QSESSTSSQEEDHV Trigger: AACGTGGTCCTCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGGGACCCGGTCCACAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 90 bp | CCTAGCCCTTCCTGTGGACCGGGTCCCAGGCCAGAAGAGCCACCATaGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGA | + |
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Preference number: 1 (lower is better) Translates to: PSPSCGPGPRPEEPP*SKMAVRIQHLQPGR Trigger: TCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGGGACCCGGTCCACAGGAAGGGCTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 90 bp | CAGAGGGTGACGGTGAAGTCAGAGCCTGGAGCTCAGGAAGGGATCTaGCTCCGAGAAGACCTGAGAATCGGGAAGCCTAGGGAGGCTCGA | + |
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Preference number: 1 (lower is better) Translates to: QRVTVKSEPGAQEGI*LREDLRIGKPREAR Trigger: TCGAGCCTCCCTAGGCTTCCCGATTCTCAGGTCTTCTCGGAGGCAGATCCCTTCCTGAGCTCCAGGCTCTGACTTCACCGTCACCCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 90 bp | CTGCTACTTGGTCCCTGCTCGCCCTGTGCCTCAGAGGGATATGGCTaGGCTAAGACCCCTATGTCAGGCCCTGAGACCCAAGATCGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LLLGPCSPCASEGYG*AKTPMSGPETQDRE Trigger: CTCACGATCTTGGGTCTCAGGGCCTGACATAGGGGTCTTAGCTCAGCCATATCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 90 bp | GGCAGCATGTGTTCCCCTTGGGTCTCCCATAGCCTTACATCAACCTaGCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GSMCSPWVSHSLTST*LARPLLPTPQAEVG Trigger: CCCAACCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGTTGATGTAAGGCTATGGGAGACCCAAGGGGAACACATGCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 90 bp | AAGTGGGAGGCAGTGGCTAGATGCCAGGTGAAGCATCGACTCGTCTaGTACTTGGTCCCTGCTCGCCCTGTGCCTCAGAGGGATATGGCT | + |
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Preference number: 1 (lower is better) Translates to: KWEAVARCQVKHRLV*YLVPARPVPQRDMA Trigger: AGCCATATCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATGCTTCACCTGGCATCTAGCCACTGCCTCCCACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 90 bp | GGAGAGGGAAGGGGCGTGGGACATGGCAGTTTGTGTGTAAACAGTTaGCACTTGGCACTCCTGGCAGACAGCAGGGCCTGGGGAAACGTT | + |
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Preference number: 1 (lower is better) Translates to: GEGRGVGHGSLCVNS*HLALLADSRAWGNV Trigger: AACGTTTCCCCAGGCCCTGCTGTCTGCCAGGAGTGCCAAGTGTCAACTGTTTACACACAAACTGCCATGTCCCACGCCCCTTCCCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 90 bp | AGTCAGAGCCTGGAGCTCAGGAAGGGATCTGCCTCCGAGAAGACCTaGGAATCGGGAAGCCTAGGGAGGCTCGATGGGCTAATTGGGCAA | + |
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Preference number: 1 (lower is better) Translates to: SQSLELRKGSASEKT*ESGSLGRLDGLIGQ Trigger: TTGCCCAATTAGCCCATCGAGCCTCCCTAGGCTTCCCGATTCTCAGGTCTTCTCGGAGGCAGATCCCTTCCTGAGCTCCAGGCTCTGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 90 bp | CCAGCCTGGCCTAGCTTAAGAGAGAGGAAGCAAGAACAGGGCTGCTaGCCCAGTTCTGCTAGAAGTGGGAGGCAGTGGCTAGATGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: PAWPSLRERKQEQGC*PSSARSGRQWLDAR Trigger: CCTGGCATCTAGCCACTGCCTCCCACTTCTAGCAGAACTGGGTCAGCAGCCCTGTTCTTGCTTCCTCTCTCTTAAGCTAGGCCAGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 90 bp | CTAAGTCTGGCCTGGAAGCTGAAGGAGGGCACAGAGGGGGACCTGTaGGCCACAGCACCAGTAAACAAGAGTTCCTCAGGAATGCAGGTG | + |
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Preference number: 1 (lower is better) Translates to: LSLAWKLKEGTEGDL*ATAPVNKSSSGMQV Trigger: CACCTGCATTCCTGAGGAACTCTTGTTTACTGGTGCTGTGGCTCACAGGTCCCCCTCTGTGCCCTCCTTCAGCTTCCAGGCCAGACTTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 90 bp | CAGAGTTCCTTTCCCTTGACCCCAGGGCATTGTGGCCTGGAGGAGTaGAGGCCAGGCCCTGTTGGTTCACGTAGAATACACTGTAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: QSSFPLTPGHCGLEE*RPGPVGSRRIHCRA Trigger: AGCCCTACAGTGTATTCTACGTGAACCAACAGGGCCTGGCCTTCACTCCTCCAGGCCACAATGCCCTGGGGTCAAGGGAAAGGAACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 90 bp | AAGAAAAACCCAGGGTCTTTCAGCAGAGGCAGCATGTGTTCCCCTTaGGTCTCCCATAGCCTTACATCAACCTGCCTGGCCAGGCCACTC | + |
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Preference number: 1 (lower is better) Translates to: KKNPGSFSRGSMCSP*VSHSLTSTCLARPL Trigger: GAGTGGCCTGGCCAGGCAGGTTGATGTAAGGCTATGGGAGACCCAAGGGGAACACATGCTGCCTCTGCTGAAAGACCCTGGGTTTTTCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 90 bp | ATGGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGAGGACCACGTTaGAGGGACCAGAGGCAGAGTGTAACAGTTCCAAAAGGAATTGTG | + |
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Preference number: 1 (lower is better) Translates to: MAVRIQHLQPGRGPR*RDQRQSVTVPKGIV Trigger: CACAATTCCTTTTGGAACTGTTACACTCTGCCTCTGGTCCCTCCAACGTGGTCCTCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 90 bp | ACCAGTAAACAAGAGTTCCTCAGGAATGCAGGTGGCAGCCAGGAATaGACATCTCATCTCTGTCCCCCTCTGAGATTCCTCCAAGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: TSKQEFLRNAGGSQE*TSHLCPPLRFLQEG Trigger: ACCTTCTTGGAGGAATCTCAGAGGGGGACAGAGATGAGATGTGCATTCCTGGCTGCCACCTGCATTCCTGAGGAACTCTTGTTTACTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR GCA 90 bp | CCTGTGGACCGGGTCCCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGTGAGCACCCACCCGTaGCCTCTCGTGCTCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PVDRVPGQKSHHGARWQSVSTHP*PLVLSV Trigger: GACACTGAGCACGAGAGGGCACGGGTGGGTGCTCAC...TGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGGGACCCGGTCCACAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR TCA 90 bp | ACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGTTGGGAAATCAGGGCCCTCCAAACACTaGGGCTCAGAGAGGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: TCLARPLLPTPQAEVGKSGPSKH*GSERAG Trigger: CCCTGCCCTCTCTGAGCCTCAGTGTTTGGAGGGCCC...TGATTTCCCAACCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CAA 90 bp | GAGGCAGTGGCTAGATGCCAGGTGAAGCATCGACTCGTCTGCTACTaGGTCCCTGCTCGCCCTGTGCCTCAGAGGGATATGGCTGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: EAVARCQVKHRLVCY*VPARPVPQRDMAEL Trigger: TAGCTCAGCCATATCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATGCTTCACCTGGCATCTAGCCACTGCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR GCA 90 bp | GAAGCATCGACTCGTCTGCTACTTGGTCCCTGCTCGCCCTGTGCCTCAGAGGGAAGCCTTACATCAACCTaGCTGGCCAGGCCACTCCTT | + |
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Preference number: 2 (lower is better) Translates to: EASTRLLLGPCSPCASEGSLTST*LARPLL Trigger: AAGGAGTGGCCTGGCCAGGCAGGTTGATGTAAGGCT...TCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCGGTGAAGTCAGAGCCTaGAGCTCAGGAAGGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: PGQKSHHGARWQSESSTSGEVRA*SSGRDL Trigger: CAGATCCCTTCCTGAGCTCCAGGCTCTGACTTCACC...GGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGTTGGGAAATCACTTCAGGTCACACAGTaGGTCAGTGGAAGAGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: TCLARPLLPTPQAEVGKSLQVTQ*VSGRVR Trigger: CCTCACTCTTCCACTGACCCACTGTGTGACCTGAAG...TGATTTCCCAACCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCATTACATCAACCTGCCTaGCCAGGCCACTCCTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: PEEPPWSKMAVRIQHLQPLHQPA*PGHSFQ Trigger: TTGGAAGGAGTGGCCTGGCCAGGCAGGTTGATGTAA...TGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CAA 90 bp | ACGATAAATGAAGCCACGGCTATCCCTGCTCCACCCTGTCCTCCCTaGTCCAGTCTTCAAGGCTTCTTGGGGACCGGAAGTTCCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: TINEATAIPAPPCPP*SSLQGFLGTGSSFT Trigger: TGTGAAGGAACTTCCGGTCCCCAAGAAGCCTTGAAGACTGGACAAGGGAGGACAGGGTGGAGCAGGGATAGCCGTGGCTTCATTTATCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | GCCCACTGGGTAGAGAGAACTGCATTAAATCTTAGGCAAGAAAACTCCCCCACAGTCTGGTTCCCAGGCTaGTCCCAGGCAAGGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: AHWVERTALNLRQENSPTVWFPG*SQARWG Trigger: TCCCCACCTTGCCTGGGACCAGCCTGGGAACCAGAC...TGTGGGGGAGTTTTCTTGCCTAAGATTTAATGCAGTTCTCTCTACCCAGTGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | CATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGAGGACCACACAGTAAAAGCATGGTaGCCTTCTTGGCTCTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: HGARWQSESSTSSQEEDHTVKAW*PSWLFG Trigger: CCCAAAGAGCCAAGAAGGCCACCATGCTTTTACTGT...GTGGTCCTCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGAGTTCCTCAGGAATGCAGGTGGCAGCCAGGAATGCACATCTCATCTCGCAGACAGCAGGGCCTaGGGAAACGTTTTCAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: KQEFLRNAGGSQECTSHLADSRA*GNVFSR Trigger: TCTGCTGAAAACGTTTCCCCAGGCCCTGCTGTCTGC...GAGATGAGATGTGCATTCCTGGCTGCCACCTGCATTCCTGAGGAACTCTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | CATCGACTCGTCTGCTACTTGGTCCCTGCTCGCCCTGTGCCTCAGAGGGATATGACCACAAGCAGAGGTTaGGAAATCATACTTTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: HRLVCYLVPARPVPQRDMTTSRG*EIILSH Trigger: GTGAGAAAGTATGATTTCCCAACCTCTGCTTGTGGT...CATATCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | CATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGAGGACCACAAGATGGTTTTAAAATaGGCTGTAGTGGGATTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HGARWQSESSTSSQEEDHKMVLK*AVVGLG Trigger: CCCCAATCCCACTACAGCCCATTTTAAAACCATCTT...GTGGTCCTCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR TCA 90 bp | CATAAGTTTAAGGTCACTCTAAGCTACATAGCAAAGATCTGGGGAGGGAAGCAAGGGTCAGTGGAAGAGTaGGGAAAGGGCCCCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: HKFKVTLSYIAKIWGGKQGSVEE*GKGPSV Trigger: GACACTGGGGCCCTTTCCTCACTCTTCCACTGACCC...TTGCTTCCCTCCCCAGATCTTTGCTATGTAGCTTAGAGTGACCTTAAACTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAAGACTATCAAATGTTaGGGATTGAGAGCAACATTT | + |
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Preference number: 2 (lower is better) Translates to: PGQKSHHGARWQSESSTSKTIKC*GLRATF Trigger: AAATGTTGCTCTCAATCCCCAACATTTGATAGTCTT...GGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CCA 90 bp | CATAAGTTTAAGGTCACTCTAAGCTACATAGCAAAGATCTGGGGAGGGAAGCAAAAGACGGGAATTCTTTaGGGCCCTCCAAACACTGAG | + |
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Preference number: 2 (lower is better) Translates to: HKFKVTLSYIAKIWGGKQKTGIL*GPPNTE Trigger: CTCAGTGTTTGGAGGGCCCCAAAGAATTCCCGTCTT...TTGCTTCCCTCCCCAGATCTTTGCTATGTAGCTTAGAGTGACCTTAAACTTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR-3UTR CAA 90 bp | CCTGTGGACCGGGTCCCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGGCCTTCTTGGCTCTTaGGGGATGCTGGTGCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: PVDRVPGQKSHHGARWQSGLLGS*GMLVQS Trigger: GCTCTGCACCAGCATCCCCAAAGAGCCAAGAAGGCC...TGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGGGACCCGGTCCACAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 72 bp | GGTCCCTGCTCGCCCTGTGCCTCAGAGGGATATGGCTaGGCTAAGACCCCTATGTCAGGCCCTGAGACCCAA | + |
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Preference number: 3 (lower is better) Translates to: GPCSPCASEGYG*AKTPMSGPETQ Trigger: TTGGGTCTCAGGGCCTGACATAGGGGTCTTAGCTCAGCCATATCCCTCTGAGGCACAGGGCGAGCAGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 72 bp | GCAGTGGCTAGATGCCAGGTGAAGCATCGACTCGTCTaGTACTTGGTCCCTGCTCGCCCTGTGCCTCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: AVARCQVKHRLV*YLVPARPVPQR Trigger: CCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATGCTTCACCTGGCATCTAGCCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 72 bp | GGGGACCGGAAGTTCCTTCACAGCCAGGAGCCAGCCTaGCCTAGCTTAAGAGAGAGGAAGCAAGAACAGGGC | + |
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Preference number: 3 (lower is better) Translates to: GDRKFLHSQEPA*PSLRERKQEQG Trigger: GCCCTGTTCTTGCTTCCTCTCTCTTAAGCTAGGCCAGGCTGGCTCCTGGCTGTGAAGGAACTTCCGGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 72 bp | CACCCTGTCCTCCCTTGTCCAGTCTTCAAGGCTTCTTaGGGACCGGAAGTTCCTTCACAGCCAGGAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: HPVLPCPVFKAS*GPEVPSQPGAS Trigger: GCTGGCTCCTGGCTGTGAAGGAACTTCCGGTCCCCAAGAAGCCTTGAAGACTGGACAAGGGAGGACAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 72 bp | AGGGGCGTGGGACATGGCAGTTTGTGTGTAAACAGTTaGCACTTGGCACTCCTGGCAGACAGCAGGGCCTGG | + |
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Preference number: 3 (lower is better) Translates to: RGVGHGSLCVNS*HLALLADSRAW Trigger: CCAGGCCCTGCTGTCTGCCAGGAGTGCCAAGTGTCAACTGTTTACACACAAACTGCCATGTCCCACGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 72 bp | GCCTGGAAGCTGAAGGAGGGCACAGAGGGGGACCTGTaGGCCACAGCACCAGTAAACAAGAGTTCCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: AWKLKEGTEGDL*ATAPVNKSSSG Trigger: TCCTGAGGAACTCTTGTTTACTGGTGCTGTGGCTCACAGGTCCCCCTCTGTGCCCTCCTTCAGCTTCCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 72 bp | AACGAGGCACGGGAGGTTGAAGTGATTTGCTCCTGGTaGAGGGAAGCCCCAGTGTGCAGGAGGGATGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: NEAREVEVICSW*REAPVCRRDAL Trigger: GAGAGCATCCCTCCTGCACACTGGGGCTTCCCTTCACCAGGAGCAAATCACTTCAACCTCCCGTGCCTCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 72 bp | ACGGTGAAGTCAGAGCCTGGAGCTCAGGAAGGGATCTaGCTCCGAGAAGACCTGAGAATCGGGAAGCCTAGG | + |
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Preference number: 3 (lower is better) Translates to: TVKSEPGAQEGI*LREDLRIGKPR Trigger: CCTAGGCTTCCCGATTCTCAGGTCTTCTCGGAGGCAGATCCCTTCCTGAGCTCCAGGCTCTGACTTCACCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 72 bp | CCAGGGTCTTTCAGCAGAGGCAGCATGTGTTCCCCTTaGGTCTCCCATAGCCTTACATCAACCTGCCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PGSFSRGSMCSP*VSHSLTSTCLA Trigger: GGCCAGGCAGGTTGATGTAAGGCTATGGGAGACCCAAGGGGAACACATGCTGCCTCTGCTGAAAGACCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 72 bp | CTACAGAGGGAGGAAACGAGGCACGGGAGGTTGAAGTaGTTTGCTCCTGGTGAAGGGAAGCCCCAGTGTGCA | + |
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Preference number: 3 (lower is better) Translates to: LQREETRHGRLK*FAPGEGKPQCA Trigger: TGCACACTGGGGCTTCCCTTCACCAGGAGCAAATCACTTCAACCTCCCGTGCCTCGTTTCCTCCCTCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 72 bp | CCATGCTACAGAGGGAGGAAACGAGGCACGGGAGGTTaGAGTGATTTGCTCCTGGTGAAGGGAAGCCCCAGT | + |
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Preference number: 3 (lower is better) Translates to: PCYRGRKRGTGG*SDLLLVKGSPS Trigger: ACTGGGGCTTCCCTTCACCAGGAGCAAATCACTTCAACCTCCCGTGCCTCGTTTCCTCCCTCTGTAGCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 72 bp | GGGGATGTAGCTCAGTTGGTAAGTGCTCGCCTAGCATaGACAAAGCCCTGGGTTCCATACCCAGCACCACTC | + |
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Preference number: 3 (lower is better) Translates to: GDVAQLVSARLA*TKPWVPYPAPL Trigger: GAGTGGTGCTGGGTATGGAACCCAGGGCTTTGTGCATGCTAGGCGAGCACTTACCAACTGAGCTACATCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 72 bp | TGTTCCCCTTGGGTCTCCCATAGCCTTACATCAACCTaGCTGGCCAGGCCACTCCTTCCAACACCACAAGCA | + |
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Preference number: 3 (lower is better) Translates to: CSPWVSHSLTST*LARPLLPTPQA Trigger: TGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGTTGATGTAAGGCTATGGGAGACCCAAGGGGAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 72 bp | CATAGCTCTTCAGAGGGTGACGGTGAAGTCAGAGCCTaGAGCTCAGGAAGGGATCTGCCTCCGAGAAGACCT | + |
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Preference number: 3 (lower is better) Translates to: HSSSEGDGEVRA*SSGRDLPPRRP Trigger: AGGTCTTCTCGGAGGCAGATCCCTTCCTGAGCTCCAGGCTCTGACTTCACCGTCACCCTCTGAAGAGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 72 bp | ATAACAGAGTTCCTTTCCCTTGACCCCAGGGCATTGTaGCCTGGAGGAGTGAAGGCCAGGCCCTGTTGGTTC | + |
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Preference number: 3 (lower is better) Translates to: ITEFLSLDPRAL*PGGVKARPCWF Trigger: GAACCAACAGGGCCTGGCCTTCACTCCTCCAGGCCACAATGCCCTGGGGTCAAGGGAAAGGAACTCTGTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR GCA 72 bp | CAAGAGTTCCTCAGGAATGCAGGTGGCAGCCAGGAATaGACATCTCATCTCTGTCCCCCTCTGAGATTCCTC | + |
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Preference number: 3 (lower is better) Translates to: QEFLRNAGGSQE*TSHLCPPLRFL Trigger: GAGGAATCTCAGAGGGGGACAGAGATGAGATGTGCATTCCTGGCTGCCACCTGCATTCCTGAGGAACTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CCA 72 bp | AGAATCCAGCACCTCCAGCCAGGAAGAGGACCACGTTaGAGGGACCAGAGGCAGAGTGTAACAGTTCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: RIQHLQPGRGPR*RDQRQSVTVPK Trigger: TTTTGGAACTGTTACACTCTGCCTCTGGTCCCTCCAACGTGGTCCTCTTCCTGGCTGGAGGTGCTGGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR TCA 72 bp | CCCAGCACCACTCAAACTGGTATAGTGGTACGGCATTaGGGAGGTGGAGGCAGGGGGATCATAAGTTTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSTTQTGIVVRH*GGGGRGIISLR Trigger: CCTTAAACTTATGATCCCCCTGCCTCCACCTCCTCAATGCCGTACCACTATACCAGTTTGAGTGGTGCTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| 3UTR GCA 72 bp | TTGGTTCACGTAGAATACACTGTAGGGCTGATCTCCTaGAATTGGAAGACTACAAGGCCTCCTGGGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LVHVEYTVGLIS*NWKTTRPPGCK Trigger: TTTGCACCCAGGAGGCCTTGTAGTCTTCCAATTGCAGGAGATCAGCCCTACAGTGTATTCTACGTGAACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR TCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCGCCCTCCCGGCGAGTTaGGCGCTTCGGCCGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVALPAS*ALRPLL Trigger: CAGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGC...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | AGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGGGAAGGCCAGCAGGCCATaGCCCAGGCGCACCTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SEERAPVSGSQAGPRQGGKASRP*PRRTLR Trigger: GCGCAAGGTGCGCCTGGGCCATGGCCTGCTGGCCTT...CCCACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCTCGTCCAGGCACCATaGAGCCGGGCCTCCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QWKSEERAPVSGSQAGPRLVQAP*SRASSH Trigger: ATGGGAGGAGGCCCGGCTGCATGGTGCCTGGACGAG...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCATGGGCTGCCGGCTACTaGGGTCCTGGAGATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGGDMRVVVRTSGAWAAGY*GPGDGG Trigger: CCCTCCATCTCCAGGACCGCAGTAGCCGGCAGCCCA...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCAATGCATCGGCCGTGTTaGCTCCGTCCAGGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGGDMRVVVRTSGAMHRPC*LRPGPG Trigger: ACCAGGCCCTGGACGGAGGCAACACGGCCGATGCAT...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCTTCACCAGGCCACATaGCAGGCGGGCCTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QWKSEERAPVSGSQAGPRLHQAT*QAGLHV Trigger: GACATGGAGGCCCGCCTGGCATGTGGCCTGGTGAAG...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | AGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAGGGTGTGGAGGTCCTaGAGGTCATCCGGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGRVRKGPQCLVPRLVPGRVWRS*RSSGAV Trigger: GACTGCCCCGGATGACCTGCAGGACCTCCACACCCT...GCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAAGGCCAGCAGGCCATaGCCCAGGCGCACCTTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PGQKSHHGARWQSESSTSKASRP*PRRTLR Trigger: GCGCAAGGTGCGCCTGGGCCATGGCCTGCTGGCCTT...GGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCTGCCTGGCAGGTCACTaGGCTGCCGGCTACTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVCLAGH*AAGYCG Trigger: ACCGCAGTAGCCGGCAGCCCAGTGACCTGCCAGGCA...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | CACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGCTGTTGGGGAGTCCTTaGGGCCAGCAGCCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HTVGQWKSEERAPVSGSQLLGSP*GQQPPG Trigger: TCCTGGGGGCTGCTGGCCTCAAGGACTCCCCAACAG...CTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCGAACAGCACCTTCTTaGGCAGGCAGGCCCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QWKSEERAPVSGSQAGPRRTAPS*AGRPAS Trigger: TGAAGCGGGCCTGCCTGCGCAAGAAGGTGCTGTTCG...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGACCGGGTCCCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCACCACAAACCAGCAGTTaGCCACCTGGCCCTGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVDRVPGQKSHHGARWQSPQTSS*PPGPGA Trigger: TGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGG...TGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGGGACCCGGTCCACAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | GGTCACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCTCGTCCAGGCACCATaGAGCCGGGCCTCCTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GHTVGQWKSEERAPVSGSLVQAP*SRASSH Trigger: ATGGGAGGAGGCCCGGCTGCATGGTGCCTGGACGAG...GGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCACCAGATTCTCGCCTTTaGCCTCCCGGCGAGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGGDMRVVVRTSGAPDSRL*PPGELS Trigger: GCTCAACTCGCCGGGAGGGCAAAGGCGAGAATCTGG...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCAGGGTGTGGAGGTCCTaGAGGTCATCCGGGGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVRVWRS*RSSGAV Trigger: GACTGCCCCGGATGACCTGCAGGACCTCCACACCCT...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCAGCAGTTGCCCACCTaGCCCTGGTGCAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVQQLPT*PWCRSW Trigger: CCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTG...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCACACAGCTACAATGCCTaGCAGGTCACTGGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGGDMRVVVRTSGAHSYNA*QVTGLP Trigger: CGGCAGCCCAGTGACCTGCCAGGCATTGTAGCTGTG...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTCCTTGCGCACATCGGTaGCAGCGTATGCATGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KSEERAPVSGSQAGPRQGPCAHR*QRMHGP Trigger: AGGGCCATGCATACGCTGTCACCGATGTGCGCAAGG...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGGGTGGAGGGGACATCTGTaGAGACTCGGAGCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SEERAPVSGSQAGPRQGGWRGHL*RLGAGT Trigger: AGTTCCTGCTCCGAGTCTTCACAGATGTCCCCTCCA...CCCACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCATGCATCGGCCGTGTTaGCTCCGTCCAGGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGQKSHHGARWQSESSTSMHRPC*LRPGPG Trigger: ACCAGGCCCTGGACGGAGGCAACACGGCCGATGCAT...GGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | AGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGGGGGCCTCCATGTCAGCTaGTGTCACAGCCTTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEERAPVSGSQAGPRQGGGLHVS*CHSLDG Trigger: TCCATCAAGGCTGTGACAGCAGCTGACATGGAGGCC...CCCACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCACCCTGGTGCAGGTCATaGGAGCTGATGCCATCTACG | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGGDMRVVVRTSGAPWCRS*ELMPST Trigger: CGTAGATGGCATCAGCTCCCATGACCTGCACCAGGG...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAGCCTGGAGCTCAGGAAGGGATCTGCCTCCGAGAAGACCTGAGAATCGGGTTGCCCACCTGGCCCTaGTGCAGGTCATGGGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEPGAQEGICLREDLRIGLPTWP*CRSWEL Trigger: CAGCTCCCATGACCTGCACCAGGGCCAGGTGGGCAA...CCCGATTCTCAGGTCTTCTCGGAGGCAGATCCCTTCCTGAGCTCCAGGCTCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | GCCTTACATCAACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGCAGCAGTTGCCCACCTaGCCCTGGTGCAGGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALHQPAWPGHSFQHHKQRQQLPT*PWCRSW Trigger: CCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTG...CCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGTTGATGTAAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGAACAGCCGGCCAGCTTaGCATAGGCCTTCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QWKSEERAPVSGSQAGPRNSRPA*HRPSPP Trigger: TGGTGGAGAAGGCCTATGCCAAGCTGGCCGGCTGTT...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCTCGCCAGTGTGGCCTaGCTCAAAGGTGGTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QWKSEERAPVSGSQAGPRLASVA*LKGGRD Trigger: ATCCCTACCACCTTTGAGCCAGGCCACACTGGCGAG...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | CACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGCGGCTACTGCGGTCCTaGAGATGGAGGGTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTVGQWKSEERAPVSGSQRLLRS*RWRVWR Trigger: CCTCCACACCCTCCATCTCCAGGACCGCAGTAGCCG...CTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCGCAGGTCATGGGAGCTaGTGCCATCTACGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVAGHGS*CHLRRA Trigger: GGCTCTTCGTAGATGGCATCAGCTCCCATGACCTGC...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTAAAAGCATGGTGGCCTTCTTGGCTCTTTGGGGATGCTGGTGCAGAGCCCCTGTTGGGGAGTCCTTaGGGCCAGCAGCCCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TVKAWWPSWLFGDAGAEPLLGSP*GQQPPG Trigger: TCCTGGGGGCTGCTGGCCTCAAGGACTCCCCAACAG...GGGCTCTGCACCAGCATCCCCAAAGAGCCAAGAAGGCCACCATGCTTTTACTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | CCTGTGGACCGGGTCCCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGGCCTCCATGTCAGCTaGTGTCACAGCCTTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVDRVPGQKSHHGARWQSGLHVS*CHSLDG Trigger: TCCATCAAGGCTGTGACAGCAGCTGACATGGAGGCC...TGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGGGACCCGGTCCACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTAACAGCCGGCCAGCTTaGCATAGGCCTTCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSEERAPVSGSQAGPRQGNSRPA*HRPSPP Trigger: TGGTGGAGAAGGCCTATGCCAAGCTGGCCGGCTGTT...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGAGGAACTCGCCAGTGTaGCCTGGCTCAAAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QWKSEERAPVSGSQAGPRRNSPV*PGSKVV Trigger: TACCACCTTTGAGCCAGGCCACACTGGCGAGTTCCT...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | ACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGTTGGGAAATCACGGCTACTGCGGTCCTaGAGATGGAGGGTGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TCLARPLLPTPQAEVGKSRLLRS*RWRVWR Trigger: CCTCCACACCCTCCATCTCCAGGACCGCAGTAGCCG...TGATTTCCCAACCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| 3UTR CAA 72 bp | CCACCCTGTCCTCCCTTGTCCAGTCTTCAAGGCTTCTaGGGGACCGGAAGTTCCTTCACAGCCAGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPCPPLSSLQGF*GTGSSFTARSQ Trigger: CTGGCTCCTGGCTGTGAAGGAACTTCCGGTCCCCAAGAAGCCTTGAAGACTGGACAAGGGAGGACAGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| 3UTR CAA 72 bp | GAAGCCACGGCTATCCCTGCTCCACCCTGTCCTCCCTaGTCCAGTCTTCAAGGCTTCTTGGGGACCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EATAIPAPPCPP*SSLQGFLGTGS Trigger: ACTTCCGGTCCCCAAGAAGCCTTGAAGACTGGACAAGGGAGGACAGGGTGGAGCAGGGATAGCCGTGGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR TCA 90 bp | AGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCCAAGCTTCTCTGACTTaGAGAAGGCCAGCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SGRVRKGPQCLVPRLVPGQASLT*RRPAGH Trigger: ATGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTG...GCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTAAACGCTGCGGGAATTaGTGTAGATGGAGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KSEERAPVSGSQAGPRQGKRCGN*CRWSWR Trigger: CCGCCAGCTCCATCTACATCAATTCCCGCAGCGTTT...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCTGGAGGGGACATCTGTaGAGACTCGGAGCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVWRGHL*RLGAGT Trigger: AGTTCCTGCTCCGAGTCTTCACAGATGTCCCCTCCA...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | CACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGAGGACCGAACAGCACCTTCTTaGGCAGGCAGGCCCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHGARWQSESSTSSQEEDRTAPS*AGRPAS Trigger: TGAAGCGGGCCTGCCTGCGCAAGAAGGTGCTGTTCG...GTCCTCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTCTGTGGGCCCTGGGGTaGCCTTATAGTAAAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KSEERAPVSGSQAGPRQGLWALG*PYSKGS Trigger: ACTCCCTTTACTATAAGGGCACCCCAGGGCCCACAG...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | CACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGAGCTGGCGGCCTTATaGTGTAGGCTGTGCATACGG | + |
|
Preference number: 4 (lower is better) Translates to: HTVGQWKSEERAPVSGSQELAAL*CRLCIR Trigger: CCGTATGCACAGCCTACAGCATAAGGCCGCCAGCTC...CTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCTGACTGTGGGCCCTaGGGTGCCCTTATAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVPDCGP*GALIVK Trigger: CTTTACTATAAGGGCACCCCAGGGCCCACAGTCAGG...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTACATCAACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGCCCTGGTGCAGGTCATaGGAGCTGATGCCATCTACG | + |
|
Preference number: 4 (lower is better) Translates to: ALHQPAWPGHSFQHHKQRPWCRS*ELMPST Trigger: CGTAGATGGCATCAGCTCCCATGACCTGCACCAGGG...CCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGTTGATGTAAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCACCTCGGTCAGGTCAATaGGTTCAGAAACACCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGGDMRVVVRTSGAPRSGQ*VQKHHL Trigger: CAGGTGGTGTTTCTGAACCCATTGACCTGACCGAGG...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTGGACCGGGTCCCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGTCTTCAGGTGCACCTaGCCCAGGAATTCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVDRVPGQKSHHGARWQSVFRCT*PRNSSF Trigger: GAAGGATGAATTCCTGGGCCAGGTGCACCTGAAGAC...TGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGGGACCCGGTCCACAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | AGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGGTCTTCAGGTGCACCTaGCCCAGGAATTCATCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVRKGPQCLVPRLVPGKVVFRCT*PRNSSF Trigger: GAAGGATGAATTCCTGGGCCAGGTGCACCTGAAGAC...CACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | CATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGAGGACCACGCAGGTCATGGGAGCTaGTGCCATCTACGAAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HGARWQSESSTSSQEEDHAGHGS*CHLRRA Trigger: GGCTCTTCGTAGATGGCATCAGCTCCCATGACCTGC...GTGGTCCTCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR TCA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCACAGAAACACCACCTGTaGAATCCACCAATGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGGDMRVVVRTSGAQKHHL*NPPMHR Trigger: CCGATGCATTGGTGGATTTCACAGGTGGTGTTTCTG...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | AGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGGGCATATCAAGCTTCTCTaGCTTGAAGAAGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEERAPVSGSQAGPRQGGHIKLL*LEEGQQ Trigger: CTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGATATG...CCCACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | CACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGAAGTGTCCTTGTGGTTaGTGCAGCCTCCACTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HTVGQWKSEERAPVSGSQKCPCG*CSLHCG Trigger: ACCGCAGTGGAGGCTGCATCAACCACAAGGACACTT...CTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTACATCAACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGCTGTGGGCCCTGGGGTaGCCTTATAGTAAAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALHQPAWPGHSFQHHKQRLWALG*PYSKGS Trigger: ACTCCCTTTACTATAAGGGCACCCCAGGGCCCACAG...CCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGTTGATGTAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | GGTCACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCTCTGGGATGACCTTCTaGCAGAGTGACTCTCGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHTVGQWKSEERAPVSGSSGMTF*QSDSRE Trigger: CTCCCGAGAGTCACTCTGGCAGAAGGTCATCCCAGA...GGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | CATCGACTCGTCTGCTACTTGGTCCCTGCTCGCCCTGTGCCTCAGAGGGATATGCCTGACTGTGGGCCCTaGGGTGCCCTTATAGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HRLVCYLVPARPVPQRDMPDCGP*GALIVK Trigger: CTTTACTATAAGGGCACCCCAGGGCCCACAGTCAGG...CATATCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | CACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGAGGAACTCGCCAGTGTaGCCTGGCTCAAAGGTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HTVGQWKSEERAPVSGSQRNSPV*PGSKVV Trigger: TACCACCTTTGAGCCAGGCCACACTGGCGAGTTCCT...CTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| 3UTR CAA 72 bp | GCTAGATGCCAGGTGAAGCATCGACTCGTCTGCTACTaGGTCCCTGCTCGCCCTGTGCCTCAGAGGGATATG | + |
|
Preference number: 4 (lower is better) Translates to: ARCQVKHRLVCY*VPARPVPQRDM Trigger: CATATCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATGCTTCACCTGGCATCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR TCA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTCAAAGCGCCAGAAGTTaGAGTGGAAGATGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KSEERAPVSGSQAGPRQGQSARS*SGRCQH Trigger: ATGCTGGCATCTTCCACTTCAACTTCTGGCGCTTTG...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR TCA 90 bp | GAAGCATCGACTCGTCTGCTACTTGGTCCCTGCTCGCCCTGTGCCTCAGAGGGAACTCGCTCAAAGAGCTaGTTCCTCTTAGCCTCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EASTRLLLGPCSPCASEGTRSKS*FLLASS Trigger: TGACGAGGCTAAGAGGAATCAGCTCTTTGAGCGAGT...TCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR TCA 90 bp | GGTCTTTCAGCAGAGGCAGCATGTGTTCCCCTTGGGTCTCCCATAGCCTTACATCCTTGCGCACATCGGTaGCAGCGTATGCATGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLSAEAACVPLGSPIALHPCAHR*QRMHGP Trigger: AGGGCCATGCATACGCTGTCACCGATGTGCGCAAGG...ATGTAAGGCTATGGGAGACCCAAGGGGAACACATGCTGCCTCTGCTGAAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR TCA 90 bp | CACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGAGGACAAGTGTCCTTGTGGTTaGTGCAGCCTCCACTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HHGARWQSESSTSSQEEDKCPCG*CSLHCG Trigger: ACCGCAGTGGAGGCTGCATCAACCACAAGGACACTT...GTCCTCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | GGTCTTTCAGCAGAGGCAGCATGTGTTCCCCTTGGGTCTCCCATAGCCTTACATCCAGATTCTCGCCTTTaGCCTCCCGGCGAGTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLSAEAACVPLGSPIALHPDSRL*PPGELS Trigger: GCTCAACTCGCCGGGAGGGCAAAGGCGAGAATCTGG...ATGTAAGGCTATGGGAGACCCAAGGGGAACACATGCTGCCTCTGCTGAAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | TATAGTGGTACGGCATTGAGGAGGTGGAGGCAGGGGGATCATAAGTTTAAGGTCTGGGCTGCCGGCTACTaGGGTCCTGGAGATGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YSGTALRRWRQGDHKFKVWAAGY*GPGDGG Trigger: CCCTCCATCTCCAGGACCGCAGTAGCCGGCAGCCCA...GACCTTAAACTTATGATCCCCCTGCCTCCACCTCCTCAATGCCGTACCACTATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | GCCTTACATCAACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGCCTCGGTCAGGTCAATaGGTTCAGAAACACCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALHQPAWPGHSFQHHKQRPRSGQ*VQKHHL Trigger: CAGGTGGTGTTTCTGAACCCATTGACCTGACCGAGG...CCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGTTGATGTAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | AGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGAAGAAAGTGTCCTTGTaGTTGATGCAGCCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RVRKGPQCLVPRLVPGKVKKVSL*LMQPPL Trigger: CAGTGGAGGCTGCATCAACCACAAGGACACTTTCTT...CACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGACGTACTGTGGGTTCTaGAAGAAAGTGTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QWKSEERAPVSGSQAGPRTYCGF*KKVSLW Trigger: CCACAAGGACACTTTCTTCCAGAACCCACAGTACGT...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CCA 90 bp | GGTCTTTCAGCAGAGGCAGCATGTGTTCCCCTTGGGTCTCCCATAGCCTTACATCACAGCTACAATGCCTaGCAGGTCACTGGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLSAEAACVPLGSPIALHHSYNA*QVTGLP Trigger: CGGCAGCCCAGTGACCTGCCAGGCATTGTAGCTGTG...ATGTAAGGCTATGGGAGACCCAAGGGGAACACATGCTGCCTCTGCTGAAAGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| 3UTR CAA 72 bp | AAGATAACAGAGTTCCTTTCCCTTGACCCCAGGGCATaGTGGCCTGGAGGAGTGAAGGCCAGGCCCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KITEFLSLDPRA*WPGGVKARPCW Trigger: CCAACAGGGCCTGGCCTTCACTCCTCCAGGCCACAATGCCCTGGGGTCAAGGGAAAGGAACTCTGTTATCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS-3UTR TCA 90 bp | ACAGTAAAAGCATGGTGGCCTTCTTGGCTCTTTGGGGATGCTGGTGCAGAGCCCAAACGCTGCGGGAATTaGTGTAGATGGAGCTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TVKAWWPSWLFGDAGAEPKRCGN*CRWSWR Trigger: CCGCCAGCTCCATCTACATCAATTCCCGCAGCGTTT...GGGCTCTGCACCAGCATCCCCAAAGAGCCAAGAAGGCCACCATGCTTTTACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS-3UTR GCA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTCTCTTGCTCACTTTCTaGCATTCCTCTGACGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSEERAPVSGSQAGPRQGLLLTF*HSSDVS Trigger: TGACACGTCAGAGGAATGGCAGAAAGTGAGCAAGAG...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR GCA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCAGCTGAGCCAGCTTCTTaGGATAGAAGATGCCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGPRQGGDMRVVVRTSGAAEPAS*DRRCLL Trigger: TAAAAGGCATCTTCTATCGCAAGAAGCTGGCTCAGC...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCAAGAAAGTGTCCTTGTaGTTGATGCAGCCTCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVKKVSL*LMQPPL Trigger: CAGTGGAGGCTGCATCAACCACAAGGACACTTTCTT...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGCCTGGAGCTCAGGAAGGGATCTGCCTCCGAGAAGACCTGAGAATCGGGCATATCAAGCTTCTCTaGCTTGAAGAAGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEPGAQEGICLREDLRIGHIKLL*LEEGQQ Trigger: CTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGATATG...CCCGATTCTCAGGTCTTCTCGGAGGCAGATCCCTTCCTGAGCTCCAGGCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS-3UTR TCA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTCTTGATGATCACATATaGGTTTGCTCCTGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSEERAPVSGSQAGPRQGLDDHI*VCSCWG Trigger: TCCCCAACAGGAGCAAACTCATATGTGATCATCAAG...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR TCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCTTGATGATCACATATaGGTTTGCTCCTGTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVLDDHI*VCSCWG Trigger: TCCCCAACAGGAGCAAACTCATATGTGATCATCAAG...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CCA 90 bp | TCAGAGCCTGGAGCTCAGGAAGGGATCTGCCTCCGAGAAGACCTGAGAATCGGGACGTACTGTGGGTTCTaGAAGAAAGTGTCCTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SEPGAQEGICLREDLRIGTYCGF*KKVSLW Trigger: CCACAAGGACACTTTCTTCCAGAACCCACAGTACGT...CCCGATTCTCAGGTCTTCTCGGAGGCAGATCCCTTCCTGAGCTCCAGGCTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS-3UTR CCA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCTTTTACATTGTACTCTaGTGTCGAGGTCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVFYIVL*CRGPSL Trigger: CAGAGAGGGACCTCGACACCAGAGTACAATGTAAAA...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CCA 90 bp | AGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGGGCAACACTTCATCTTCTaGCTTCTTGACTTCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: SEERAPVSGSQAGPRQGGQHFIF*LLDFKY Trigger: GTATTTGAAGTCAAGAAGCCAGAAGATGAAGTGTTG...CCCACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| 3UTR CAA 72 bp | AAAATGGGCTGTAGTGGGATTGGGGATGTAGCTCAGTaGGTAAGTGCTCGCCTAGCATGCACAAAGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KMGCSGIGDVAQ*VSARLACTKPW Trigger: CCAGGGCTTTGTGCATGCTAGGCGAGCACTTACCAACTGAGCTACATCCCCAATCCCACTACAGCCCATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | AGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCACCAGAACTCATTTTTaGAGTTGGAATGGCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRVRKGPQCLVPRLVPGTRTHF*SWNGSK Trigger: TTTACTGCCATTCCAACTCCAAAAATGAGTTCTGGT...GCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTTTCAAATACGTACTGTaGGTTCTGGAAGAAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSEERAPVSGSQAGPRQGFKYVL*VLEESV Trigger: GACACTTTCTTCCAGAACCCACAGTACGTATTTGAA...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CCA 90 bp | CATAAGTTTAAGGTCACTCTAAGCTACATAGCAAAGATCTGGGGAGGGAAGCAATGCCTGGCAGGTCACTaGGCTGCCGGCTACTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: HKFKVTLSYIAKIWGGKQCLAGH*AAGYCG Trigger: ACCGCAGTAGCCGGCAGCCCAGTGACCTGCCAGGCA...TTGCTTCCCTCCCCAGATCTTTGCTATGTAGCTTAGAGTGACCTTAAACTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR TCA 90 bp | GCCCACTGGGTAGAGAGAACTGCATTAAATCTTAGGCAAGAAAACTCCCCCACACAAGCTTCTCTGACTTaGAGAAGGCCAGCAGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AHWVERTALNLRQENSPTQASLT*RRPAGH Trigger: ATGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTG...TGTGGGGGAGTTTTCTTGCCTAAGATTTAATGCAGTTCTCTCTACCCAGTGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | GGTCTTTCAGCAGAGGCAGCATGTGTTCCCCTTGGGTCTCCCATAGCCTTACATGCTGAGCCAGCTTCTTaGGATAGAAGATGCCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GLSAEAACVPLGSPIALHAEPAS*DRRCLL Trigger: TAAAAGGCATCTTCTATCGCAAGAAGCTGGCTCAGC...ATGTAAGGCTATGGGAGACCCAAGGGGAACACATGCTGCCTCTGCTGAAAGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | GTTCCTCAGGAATGCAGGTGGCAGCCAGGAATGCACATCTCATCTCTGTCCCCCTTCAAATACGTACTGTaGGTTCTGGAAGAAAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPQECRWQPGMHISSLSPFKYVL*VLEESV Trigger: GACACTTTCTTCCAGAACCCACAGTACGTATTTGAA...GGGGGACAGAGATGAGATGTGCATTCCTGGCTGCCACCTGCATTCCTGAGGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | CCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCCAACACTTCATCTTCTaGCTTCTTGACTTCAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: PGQKSHHGARWQSESSTSQHFIF*LLDFKY Trigger: GTATTTGAAGTCAAGAAGCCAGAAGATGAAGTGTTG...GGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | ATGTCTCCTGCATATGCCAATAAGGGTTCTTTCAAGATGGTTTTAAAATGGGCTCTTCACCAGGCCACATaGCAGGCGGGCCTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: MSPAYANKGSFKMVLKWALHQAT*QAGLHV Trigger: GACATGGAGGCCCGCCTGGCATGTGGCCTGGTGAAG...AGCCCATTTTAAAACCATCTTGAAAGAACCCTTATTGGCATATGCAGGAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | CATAAGTTTAAGGTCACTCTAAGCTACATAGCAAAGATCTGGGGAGGGAAGCAAGAGCTGGCGGCCTTATaGTGTAGGCTGTGCATACGG | + |
|
Preference number: 4 (lower is better) Translates to: HKFKVTLSYIAKIWGGKQELAAL*CRLCIR Trigger: CCGTATGCACAGCCTACAGCATAAGGCCGCCAGCTC...TTGCTTCCCTCCCCAGATCTTTGCTATGTAGCTTAGAGTGACCTTAAACTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | CATAAGTTTAAGGTCACTCTAAGCTACATAGCAAAGATCTGGGGAGGGAAGCAACTCGCCAGTGTGGCCTaGCTCAAAGGTGGTAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HKFKVTLSYIAKIWGGKQLASVA*LKGGRD Trigger: ATCCCTACCACCTTTGAGCCAGGCCACACTGGCGAG...TTGCTTCCCTCCCCAGATCTTTGCTATGTAGCTTAGAGTGACCTTAAACTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CCA 90 bp | TTTCTCACCAGCATGATCATAGCTCTTCAGAGGGTGACGGTGAAGTCAGAGCCTTTTTACATTGTACTCTaGTGTCGAGGTCCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLTSMIIALQRVTVKSEPFYIVL*CRGPSL Trigger: CAGAGAGGGACCTCGACACCAGAGTACAATGTAAAA...AGGCTCTGACTTCACCGTCACCCTCTGAAGAGCTATGATCATGCTGGTGAGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR GCA 90 bp | CATAAGTTTAAGGTCACTCTAAGCTACATAGCAAAGATCTGGGGAGGGAAGCAACTCTTGCTCACTTTCTaGCATTCCTCTGACGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: HKFKVTLSYIAKIWGGKQLLLTF*HSSDVS Trigger: TGACACGTCAGAGGAATGGCAGAAAGTGAGCAAGAG...TTGCTTCCCTCCCCAGATCTTTGCTATGTAGCTTAGAGTGACCTTAAACTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS TCA 90 bp | AGAAGGCCAGCAGGCCATGGCCCAGGCGCACCTTGCGCACATCGGTaGCAGCGTATGCATGGCCCTTCACCAGGCCACATGCCAGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRPAGHGPGAPCAHR*QRMHGPSPGHMPGG Trigger: CCCGCCTGGCATGTGGCCTGGTGAAGGGCCATGCATACGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGCCATGGCCTGCTGGCCTTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 90 bp | CAGGCCATGGCCCAGGCGCACCTTGCGCACATCGGTGACAGCGTATaGATGGCCCTTCACCAGGCCACATGCCAGGCGGGCCTCCATGTC | + |
|
Preference number: 5 (lower is better) Translates to: QAMAQAHLAHIGDSV*MALHQATCQAGLHV Trigger: GACATGGAGGCCCGCCTGGCATGTGGCCTGGTGAAGGGCCATGCATACGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGCCATGGCCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGGGTGGCCCAGGCGCACCTaGCGCACATCGGTGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SEERAPVSGSQAGPRQGGWPRRT*RTSVTA Trigger: CGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGCCA...CCCACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | CCATGGCCCAGGCGCACCTTGCGCACATCGGTGACAGCGTATGCATaGCCCTTCACCAGGCCACATGCCAGGCGGGCCTCCATGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWPRRTLRTSVTAYA*PFTRPHARRASMSA Trigger: AGCTGACATGGAGGCCCGCCTGGCATGTGGCCTGGTGAAGGGCCATGCATACGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGCCATGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | GCTACAATGCCTGGCAGGTCACTGGGCTGCCGGCTACTGCGGTCCTaGAGATGGAGGGTGTGGAGGTCCTGCAGGTCATCCGGGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ATMPGRSLGCRLLRS*RWRVWRSCRSSGAV Trigger: GACTGCCCCGGATGACCTGCAGGACCTCCACACCCTCCATCTCCAGGACCGCAGTAGCCGGCAGCCCAGTGACCTGCCAGGCATTGTAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCTGCCCTCCCGGCGAGTaGAGCGCTTCGGCCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVCPPGE*SASAAA Trigger: AGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCA...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | AGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCCCTGTTGGGGAGTCCTaGAGGCCAGCAGCCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGRVRKGPQCLVPRLVPGPVGES*RPAAPR Trigger: CCTGGGGGCTGCTGGCCTCAAGGACTCCCCAACAGG...GCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | AGCCGTGAGAGAGGCACTGCAGAGGACTCGCACAGCTACAATGCCTaGCAGGTCACTGGGCTGCCGGCTACTGCGGTCCTGGAGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRERGTAEDSHSYNA*QVTGLPATAVLEME Trigger: CTCCATCTCCAGGACCGCAGTAGCCGGCAGCCCAGTGACCTGCCAGGCATTGTAGCTGTGCGAGTCCTCTGCAGTGCCTCTCTCACGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGCCACAAACCAGCAGTaGCCCACCTGGCCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSEERAPVSGSQAGPRQGATNQQ*PTWPWC Trigger: GCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGC...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | CATCGACTCGTCTGCTACTTGGTCCCTGCTCGCCCTGTGCCTCAGAGGGATATGTGGCCCAGGCGCACCTaGCGCACATCGGTGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HRLVCYLVPARPVPQRDMWPRRT*RTSVTA Trigger: CGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGCCA...CATATCCCTCTGAGGCACAGGGCGAGCAGGGACCAAGTAGCAGACGAGTCGATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS-3UTR CAA 90 bp | ACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGTTGGGAAATCATGCCCTCCCGGCGAGTaGAGCGCTTCGGCCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TCLARPLLPTPQAEVGKSCPPGE*SASAAA Trigger: AGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCA...TGATTTCCCAACCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS-3UTR CAA 90 bp | CCTGTGGACCGGGTCCCAGGCCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGCCAGATTCTCGCCTTaGCCCTCCCGGCGAGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVDRVPGQKSHHGARWQSARFSP*PSRRVE Trigger: CTCAACTCGCCGGGAGGGCAAAGGCGAGAATCTGGC...TGACTGCCATCTTGCTCCATGGTGGCTCTTCTGGCCTGGGACCCGGTCCACAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS-3UTR CAA 90 bp | CACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGCCTGTTGGGGAGTCCTaGAGGCCAGCAGCCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HTVGQWKSEERAPVSGSQPVGES*RPAAPR Trigger: CCTGGGGGCTGCTGGCCTCAAGGACTCCCCAACAGG...CTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 90 bp | GGGGCTCATCCAGGCGTAGTTCCCGGCAGTTGGAGGGGACATCTGTaGAGACTCGGAGCAGGAACTCGCCAGTGTGGCCTGGCTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GAHPGVVPGSWRGHL*RLGAGTRQCGLAQR Trigger: CCTTTGAGCCAGGCCACACTGGCGAGTTCCTGCTCCGAGTCTTCACAGATGTCCCCTCCAACTGCCGGGAACTACGCCTGGATGAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | GGTCACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCGCCACAAACCAGCAGTaGCCCACCTGGCCCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GHTVGQWKSEERAPVSGSATNQQ*PTWPWC Trigger: GCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGC...GGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGCCAGATTCTCGCCTTaGCCCTCCCGGCGAGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSEERAPVSGSQAGPRQGARFSP*PSRRVE Trigger: CTCAACTCGCCGGGAGGGCAAAGGCGAGAATCTGGC...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTGGGCGTAGTTCCCGGCAGTaGGAGGGGACATCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SEERAPVSGSQAGPRQGGRSSRQ*EGTSVK Trigger: CTTCACAGATGTCCCCTCCAACTGCCGGGAACTACG...CCCACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | GCAGCCACAAACCAGCAGTTGCCCACCTGGCCCTGGTGCAGGTCATaGGAGCTGATGCCATCTACGAAGAGCCGGGGATCGTCGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: AATNQQLPTWPWCRS*ELMPSTKSRGSSQI Trigger: TATCTGCGACGATCCCCGGCTCTTCGTAGATGGCATCAGCTCCCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | AGTGATGAGCAGGCAGCCACAAACCAGCAGTTGCCCACCTGGCCCTaGTGCAGGTCATGGGAGCTGATGCCATCTACGAAGAGCCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SDEQAATNQQLPTWP*CRSWELMPSTKSRG Trigger: TCCCCGGCTCTTCGTAGATGGCATCAGCTCCCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCTGCCTGCTCATCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | GAGGCCAGTGATGAGCAGGCAGCCACAAACCAGCAGTTGCCCACCTaGCCCTGGTGCAGGTCATGGGAGCTGATGCCATCTACGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EASDEQAATNQQLPT*PWCRSWELMPSTKS Trigger: GCTCTTCGTAGATGGCATCAGCTCCCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCTGCCTGCTCATCACTGGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | GAAAGTGTCCTTGTGGTTGATGCAGCCTCCACTGCGGTTCTGCTGTaGGTCCTCATGTCTCGTCCAGGCACCATGCAGCCGGGCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ESVLVVDAASTAVLL*VLMSRPGTMQPGLL Trigger: GAGGAGGCCCGGCTGCATGGTGCCTGGACGAGACATGAGGACCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACACTTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | GGGGACATCTGTGAAGACTCGGAGCAGGAACTCGCCAGTGTGGCCTaGCTCAAAGGTGGTAGGGATGATAACGTAGCGGCCCTCGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDICEDSEQELASVA*LKGGRDDNVAALGQ Trigger: CTGCCCGAGGGCCGCTACGTTATCATCCCTACCACCTTTGAGCCAGGCCACACTGGCGAGTTCCTGCTCCGAGTCTTCACAGATGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | AGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCGCTGCTGTCACAGCCTaGATGGAGGCACTGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGRVRKGPQCLVPRLVPGAAVTA*MEALMS Trigger: GCTCATCAGTGCCTCCATCAAGGCTGTGACAGCAGC...GCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | GCTGGTCCCAGGCAAGGTGGGGACATGCGAGTAGTGGTGAGGACTAGTGGGGCACGTAGTTCCCGGCAGTaGGAGGGGACATCTGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGPRQGGDMRVVVRTSGARSSRQ*EGTSVK Trigger: CTTCACAGATGTCCCCTCCAACTGCCGGGAACTACG...TGCCCCACTAGTCCTCACCACTACTCGCATGTCCCCACCTTGCCTGGGACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 90 bp | ATGAGCCCGCCTCTGCTGTGCACCTTCAGCACTCGCTCAAAGAGCTaGTTCCTCTTAGCCTCGTCAGTGGCCAAGTCCCCCTCGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MSPPLLCTFSTRSKS*FLLASSVAKSPSVR Trigger: CCTGACCGAGGGGGACTTGGCCACTGACGAGGCTAAGAGGAATCAGCTCTTTGAGCGAGTGCTGAAGGTGCACAGCAGAGGCGGGCTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 90 bp | CGCCCCAGGGGTTCCTCAGACGGATCATATCAAGCTTCTCTGACTTaGAGAAGGCCAGCAGGCCATGGCCCAGGCGCACCTTGCGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: RPRGSSDGSYQASLT*RRPAGHGPGAPCAH Trigger: ATGTGCGCAAGGTGCGCCTGGGCCATGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGATATGATCCGTCTGAGGAACCCCTGGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 90 bp | TGGAAGAAAGTGTCCTTGTGGTTGATGCAGCCTCCACTGCGGTTCTaGTGTGGGTCCTCATGTCTCGTCCAGGCACCATGCAGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WKKVSLWLMQPPLRF*CGSSCLVQAPCSRA Trigger: GGCCCGGCTGCATGGTGCCTGGACGAGACATGAGGACCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACACTTTCTTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 90 bp | CCAAGTCCCCCTCGGTCAGGTCAATGGGTTCAGAAACACCACCTGTaGAATCCACCAATGCATCGGCCGTGTTGCCTCCGTCCAGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSPPRSGQWVQKHHL*NPPMHRPCCLRPGP Trigger: AGGCCCTGGACGGAGGCAACACGGCCGATGCATTGGTGGATTTCACAGGTGGTGTTTCTGAACCCATTGACCTGACCGAGGGGGACTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 90 bp | GGTCAGGTCAATGGGTTCAGAAACACCACCTGTGAAATCCACCAATaGATCGGCCGTGTTGCCTCCGTCCAGGGCCTGGTAACAGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQVNGFRNTTCEIHQ*IGRVASVQGLVTAG Trigger: GCCGGCTGTTACCAGGCCCTGGACGGAGGCAACACGGCCGATGCATTGGTGGATTTCACAGGTGGTGTTTCTGAACCCATTGACCTGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | ATCGTCGCAGATATCCTTAGGCCGCTTCCACCTGACTGTGGGCCCTaGGGTGCCCTTATAGTAAAGGGAGTCGTCGGTGGCAGGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: IVADILRPLPPDCGP*GALIVKGVVGGREE Trigger: CTCTTCCCTGCCACCGACGACTCCCTTTACTATAAGGGCACCCCAGGGCCCACAGTCAGGTGGAAGCGGCCTAAGGATATCTGCGACGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCCAAAGCGCCAGAAGTaGAAGTGGAAGATGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QWKSEERAPVSGSQAGPRPKRQK*KWKMPA Trigger: TGCTGGCATCTTCCACTTCAACTTCTGGCGCTTTGG...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | GGTCACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCGCTGCTGTCACAGCCTaGATGGAGGCACTGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHTVGQWKSEERAPVSGSAAVTA*MEALMS Trigger: GCTCATCAGTGCCTCCATCAAGGCTGTGACAGCAGC...GGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | CAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGTCAAGCTTCTCTGACTaGAAGAAGGCCAGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QWKSEERAPVSGSQAGPRSSFSD*KKASRP Trigger: TGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGA...CCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTAAAGTGTCCTTGTGGTaGATGCAGCCTCCACTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KSEERAPVSGSQAGPRQGKVSLW*MQPPLR Trigger: CCGCAGTGGAGGCTGCATCAACCACAAGGACACTTT...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 90 bp | GTCGAAGCCAATGGCCAGATTCTCGCCTTTGCCCTCCCGGCGAGTTaGGCGCTTCGGCCGCTGCTGGATACTGATCAACACTTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: VEANGQILAFALPAS*ALRPLLDTDQHFIF Trigger: GAAGATGAAGTGTTGATCAGTATCCAGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCAAAGGCGAGAATCTGGCCATTGGCTTCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 90 bp | CGGATCATATCAAGCTTCTCTGACTTGAAGAAGGCCAGCAGGCCATaGCCCAGGCGCACCTTGCGCACATCGGTGACAGCGTATGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: RIISSFSDLKKASRP*PRRTLRTSVTAYAW Trigger: CCATGCATACGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGCCATGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGATATGATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | GTCCAGTCTTCAAGGCTTCTTGGGGACCGGAAGTTCCTTCACAGCCAGGAGCCAAAAGTGTCCTTGTGGTaGATGCAGCCTCCACTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VQSSRLLGDRKFLHSQEPKVSLW*MQPPLR Trigger: CCGCAGTGGAGGCTGCATCAACCACAAGGACACTTT...TGGCTCCTGGCTGTGAAGGAACTTCCGGTCCCCAAGAAGCCTTGAAGACTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS CCA 90 bp | TACGGTATTGGCGGTTCTCTTCCACCTTATAGATGTCGAAGCCAATaGCCAGATTCTCGCCTTTGCCCTCCCGGCGAGTTGAGCGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: YGIGGSLPPYRCRSQ*PDSRLCPPGELSAS Trigger: CGAAGCGCTCAACTCGCCGGGAGGGCAAAGGCGAGAATCTGGCCATTGGCTTCGACATCTATAAGGTGGAAGAGAACCGCCAATACCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS-3UTR CAA 90 bp | CCAGAAGAGCCACCATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCACCAAAGCGCCAGAAGTaGAAGTGGAAGATGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PEEPPWSKMAVRIQHLQPPKRQK*KWKMPA Trigger: TGCTGGCATCTTCCACTTCAACTTCTGGCGCTTTGG...TGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATGGTGGCTCTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CAA 90 bp | CATGGAGCAAGATGGCAGTCAGAATCCAGCACCTCCAGCCAGGAAGAGGACCACTCAAGCTTCTCTGACTaGAAGAAGGCCAGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGARWQSESSTSSQEEDHSSFSD*KKASRP Trigger: TGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGA...GTGGTCCTCTTCCTGGCTGGAGGTGCTGGATTCTGACTGCCATCTTGCTCCATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
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| CDS-3UTR CAA 90 bp | CACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGTGGAAGAAAGTGTCCTaGTGGTTGATGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HTVGQWKSEERAPVSGSQWKKVS*WLMQPP Trigger: TGGAGGCTGCATCAACCACAAGGACACTTTCTTCCA...CTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS GCA 90 bp | AGATTCTCGCCTTTGCCCTCCCGGCGAGTTGAGCGCTTCGGCCGCTaGTGGATACTGATCAACACTTCATCTTCTGGCTTCTTGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RFSPLPSRRVERFGR*WILINTSSSGFLTS Trigger: TGAAGTCAAGAAGCCAGAAGATGAAGTGTTGATCAGTATCCAGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCAAAGGCGAGAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCCCAGGCAAGGTAAGATGCCTTTTACATaGTACTCTGGTGTCGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSEERAPVSGSQAGPRQGKMPFT*YSGVEV Trigger: GACCTCGACACCAGAGTACAATGTAAAAGGCATCTT...ACCTTGCCTGGGACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CCA 90 bp | TTCTCGCCTTTGCCCTCCCGGCGAGTTGAGCGCTTCGGCCGCTGCTaGATACTGATCAACACTTCATCTTCTGGCTTCTTGACTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FSPLPSRRVERFGRC*ILINTSSSGFLTSN Trigger: ATTTGAAGTCAAGAAGCCAGAAGATGAAGTGTTGATCAGTATCCAGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCAAAGGCGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CAA 90 bp | ACAGTAAAAGCATGGTGGCCTTCTTGGCTCTTTGGGGATGCTGGTGCAGAGCCCTGGAAGAAAGTGTCCTaGTGGTTGATGCAGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVKAWWPSWLFGDAGAEPWKKVS*WLMQPP Trigger: TGGAGGCTGCATCAACCACAAGGACACTTTCTTCCA...GGGCTCTGCACCAGCATCCCCAAAGAGCCAAGAAGGCCACCATGCTTTTACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS TCA 90 bp | CTTCAAATACGTACTGTGGGTTCTGGAAGAAAGTGTCCTTGTGGTTaGTGCAGCCTCCACTGCGGTTCTGCTGTGGGTCCTCATGTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LQIRTVGSGRKCPCG*CSLHCGSAVGPHVS Trigger: CGAGACATGAGGACCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACACTTTCTTCCAGAACCCACAGTACGTATTTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CAA 90 bp | CATAAGTTTAAGGTCACTCTAAGCTACATAGCAAAGATCTGGGGAGGGAAGCAAAATGCATCGGCCGTGTaGCCTCCGTCCAGGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HKFKVTLSYIAKIWGGKQNASAV*PPSRAW Trigger: CCAGGCCCTGGACGGAGGCAACACGGCCGATGCATT...TTGCTTCCCTCCCCAGATCTTTGCTATGTAGCTTAGAGTGACCTTAAACTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CAA 90 bp | TGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGGCTGGTCTTTTCGCCCTCACACTaGATGATCACATATGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: WVSGRVRKGPQCLVPRLVFSPSH*MITYEF Trigger: AAACTCATATGTGATCATCAAGTGTGAGGGCGAAAA...GACCAGCCTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CAA 90 bp | CACACAGTGGGTCAGTGGAAGAGTGAGGAAAGGGCCCCAGTGTCTGGTTCCCAGTCATCTTCTGGCTTCTaGACTTCAAATACGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: HTVGQWKSEERAPVSGSQSSSGF*TSNTYC Trigger: ACAGTACGTATTTGAAGTCAAGAAGCCAGAAGATGA...CTGGGAACCAGACACTGGGGCCCTTTCCTCACTCTTCCACTGACCCACTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CCA 90 bp | TTGACTTCAAATACGTACTGTGGGTTCTGGAAGAAAGTGTCCTTGTaGTTGATGCAGCCTCCACTGCGGTTCTGCTGTGGGTCCTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LTSNTYCGFWKKVSL*LMQPPLRFCCGSSC Trigger: ACATGAGGACCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACACTTTCTTCCAGAACCCACAGTACGTATTTGAAGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGCCTGGCCAGGCCACTCCTTCCAACACCACAAGCAGAGGTTGGGAAATCATTTTCGCCCTCACACTaGATGATCACATATGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: TCLARPLLPTPQAEVGKSFSPSH*MITYEF Trigger: AAACTCATATGTGATCATCAAGTGTGAGGGCGAAAA...TGATTTCCCAACCTCTGCTTGTGGTGTTGGAAGGAGTGGCCTGGCCAGGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CAA 90 bp | GGTCTTTCAGCAGAGGCAGCATGTGTTCCCCTTGGGTCTCCCATAGCCTTACATTCATCTTCTGGCTTCTaGACTTCAAATACGTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GLSAEAACVPLGSPIALHSSSGF*TSNTYC Trigger: ACAGTACGTATTTGAAGTCAAGAAGCCAGAAGATGA...ATGTAAGGCTATGGGAGACCCAAGGGGAACACATGCTGCCTCTGCTGAAAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS-3UTR CAA 90 bp | TATAGTGGTACGGCATTGAGGAGGTGGAGGCAGGGGGATCATAAGTTTAAGGTCAAGATGCCTTTTACATaGTACTCTGGTGTCGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YSGTALRRWRQGDHKFKVKMPFT*YSGVEV Trigger: GACCTCGACACCAGAGTACAATGTAAAAGGCATCTT...GACCTTAAACTTATGATCCCCCTGCCTCCACCTCCTCAATGCCGTACCACTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040971.14 |
||
| CDS GCA 72 bp | GCCCAGGCGCACCTTGCGCACATCGGTGACAGCGTATaGATGGCCCTTCACCAGGCCACATGCCAGGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQAHLAHIGDSV*MALHQATCQAG Trigger: GCCCGCCTGGCATGTGGCCTGGTGAAGGGCCATGCATACGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 72 bp | AGGTCACTGGGCTGCCGGCTACTGCGGTCCTGGAGATaGAGGGTGTGGAGGTCCTGCAGGTCATCCGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSLGCRLLRSWR*RVWRSCRSSGA Trigger: TGCCCCGGATGACCTGCAGGACCTCCACACCCTCCATCTCCAGGACCGCAGTAGCCGGCAGCCCAGTGACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CCA 72 bp | CCTGGCAGGTCACTGGGCTGCCGGCTACTGCGGTCCTaGAGATGGAGGGTGTGGAGGTCCTGCAGGTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRSLGCRLLRS*RWRVWRSCRSS Trigger: GGATGACCTGCAGGACCTCCACACCCTCCATCTCCAGGACCGCAGTAGCCGGCAGCCCAGTGACCTGCCAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS GCA 72 bp | CACCAGGCCACATGCCAGGCGGGCCTCCATGTCAGCTaGTGTCACAGCCTTGATGGAGGCACTGATGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: HQATCQAGLHVS*CHSLDGGTDEP Trigger: GGGCTCATCAGTGCCTCCATCAAGGCTGTGACAGCAGCTGACATGGAGGCCCGCCTGGCATGTGGCCTGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS GCA 72 bp | ACTCGCACAGCTACAATGCCTGGCAGGTCACTGGGCTaGCGGCTACTGCGGTCCTGGAGATGGAGGGTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TRTATMPGRSLG*RLLRSWRWRVW Trigger: CCACACCCTCCATCTCCAGGACCGCAGTAGCCGGCAGCCCAGTGACCTGCCAGGCATTGTAGCTGTGCGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CCA 72 bp | AGAGGACTCGCACAGCTACAATGCCTGGCAGGTCACTaGGCTGCCGGCTACTGCGGTCCTGGAGATGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGLAQLQCLAGH*AAGYCGPGDGG Trigger: CCCTCCATCTCCAGGACCGCAGTAGCCGGCAGCCCAGTGACCTGCCAGGCATTGTAGCTGTGCGAGTCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CCA 72 bp | AGAGGCACTGCAGAGGACTCGCACAGCTACAATGCCTaGCAGGTCACTGGGCTGCCGGCTACTGCGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGTAEDSHSYNA*QVTGLPATAVL Trigger: CAGGACCGCAGTAGCCGGCAGCCCAGTGACCTGCCAGGCATTGTAGCTGTGCGAGTCCTCTGCAGTGCCTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CAA 72 bp | GAGGCCAGTGATGAGCAGGCAGCCACAAACCAGCAGTaGCCCACCTGGCCCTGGTGCAGGTCATGGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: EASDEQAATNQQ*PTWPWCRSWEL Trigger: CAGCTCCCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCTGCCTGCTCATCACTGGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CAA 90 bp | GACTCTCGGGAGGCCAGTGATGAGCAGGCAGCCACAAACCAGCAGTaGCCCACCTGGCCCTGGTGCAGGTCATGGGAGCTGATGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: DSREASDEQAATNQQ*PTWPWCRSWELMPS Trigger: AGATGGCATCAGCTCCCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCTGCCTGCTCATCACTGGCCTCCCGAGAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 72 bp | CCAGGCGTAGTTCCCGGCAGTTGGAGGGGACATCTGTaGAGACTCGGAGCAGGAACTCGCCAGTGTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGVVPGSWRGHL*RLGAGTRQCGL Trigger: CAGGCCACACTGGCGAGTTCCTGCTCCGAGTCTTCACAGATGTCCCCTCCAACTGCCGGGAACTACGCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 72 bp | TGGCAGGGAAGAGGGGATCCTCGAACAGCACCTTCTTaGGCAGGCAGGCCCGCTTCAGCGCCGAGTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WQGRGDPRTAPS*AGRPASAPSSS Trigger: AGAACTACTCGGCGCTGAAGCGGGCCTGCCTGCGCAAGAAGGTGCTGTTCGAGGATCCCCTCTTCCCTGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CAA 72 bp | TTGAAGAAGGCCAGCAGGCCATGGCCCAGGCGCACCTaGCGCACATCGGTGACAGCGTATGCATGGCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LKKASRPWPRRT*RTSVTAYAWPF Trigger: GAAGGGCCATGCATACGCTGTCACCGATGTGCGCAAGGTGCGCCTGGGCCATGGCCTGCTGGCCTTCTTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 72 bp | TCTGGTCCTCATAGGCCTTCGCGCAGGAGAACATGGTaGCCACGTCCCCAAGAAGGGGAGGCACCTTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGPHRPSRRRTW*PRPQEGEAPWP Trigger: TGGCCAAGGTGCCTCCCCTTCTTGGGGACGTGGTCACCATGTTCTCCTGCGCGAAGGCCTATGAGGACCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155056.2 |
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| CDS CCA 72 bp | CAGGCAGCCACAAACCAGCAGTTGCCCACCTGGCCCTaGTGCAGGTCATGGGAGCTGATGCCATCTACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: QAATNQQLPTWP*CRSWELMPSTK Trigger: CTTCGTAGATGGCATCAGCTCCCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 72 bp | GATGAGCAGGCAGCCACAAACCAGCAGTTGCCCACCTaGCCCTGGTGCAGGTCATGGGAGCTGATGCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: DEQAATNQQLPT*PWCRSWELMPS Trigger: AGATGGCATCAGCTCCCATGACCTGCACCAGGGCCAGGTGGGCAACTGCTGGTTTGTGGCTGCCTGCTCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 72 bp | CTTGTGGTTGATGCAGCCTCCACTGCGGTTCTGCTGTaGGTCCTCATGTCTCGTCCAGGCACCATGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LVVDAASTAVLL*VLMSRPGTMQP Trigger: CGGCTGCATGGTGCCTGGACGAGACATGAGGACCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CAA 90 bp | TCGCCCCAGGGGTTCCTCAGACGGATCATATCAAGCTTCTCTGACTaGAAGAAGGCCAGCAGGCCATGGCCCAGGCGCACCTTGCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: SPQGFLRRIISSFSD*KKASRPWPRRTLRT Trigger: TGTGCGCAAGGTGCGCCTGGGCCATGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGATATGATCCGTCTGAGGAACCCCTGGGGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 72 bp | AATGGCCAGATTCTCGCCTTTGCCCTCCCGGCGAGTTaGGCGCTTCGGCCGCTGCTGGATACTGATCAACAC | + |
|
Preference number: 6 (lower is better) Translates to: NGQILAFALPAS*ALRPLLDTDQH Trigger: GTGTTGATCAGTATCCAGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCAAAGGCGAGAATCTGGCCATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 72 bp | TTCTGCTGTGGGTCCTCATGTCTCGTCCAGGCACCATaGAGCCGGGCCTCCTCCCATGTCTTATGGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: FCCGSSCLVQAP*SRASSHVLWML Trigger: GAGCATCCATAAGACATGGGAGGAGGCCCGGCTGCATGGTGCCTGGACGAGACATGAGGACCCACAGCAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 72 bp | GTGTCCTTGTGGTTGATGCAGCCTCCACTGCGGTTCTaGTGTGGGTCCTCATGTCTCGTCCAGGCACCATGC | + |
|
Preference number: 6 (lower is better) Translates to: VSLWLMQPPLRF*CGSSCLVQAPC Trigger: GCATGGTGCCTGGACGAGACATGAGGACCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 72 bp | TATAGATGTCGAAGCCAATGGCCAGATTCTCGCCTTTaGCCTCCCGGCGAGTTGAGCGCTTCGGCCGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: YRCRSQWPDSRL*PPGELSASAAA Trigger: AGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCAAAGGCGAGAATCTGGCCATTGGCTTCGACATCTATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 72 bp | GCCCTGGGGTGCCCTTATAGTAAAGGGAGTCGTCGGTaGCAGGGAAGAGGGGATCCTCGAACAGCACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALGCPYSKGSRR*QGRGDPRTAPS Trigger: AGAAGGTGCTGTTCGAGGATCCCCTCTTCCCTGCCACCGACGACTCCCTTTACTATAAGGGCACCCCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 72 bp | CCTCTGCTGTGCACCTTCAGCACTCGCTCAAAGAGCTaGTTCCTCTTAGCCTCGTCAGTGGCCAAGTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PLLCTFSTRSKS*FLLASSVAKSP Trigger: GGGGGACTTGGCCACTGACGAGGCTAAGAGGAATCAGCTCTTTGAGCGAGTGCTGAAGGTGCACAGCAGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 72 bp | CCAGGGGTTCCTCAGACGGATCATATCAAGCTTCTCTaGCTTGAAGAAGGCCAGCAGGCCATGGCCCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PGVPQTDHIKLL*LEEGQQAMAQA Trigger: CGCCTGGGCCATGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGATATGATCCGTCTGAGGAACCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 72 bp | CCTTTGCCCTCCCGGCGAGTTGAGCGCTTCGGCCGCTaGTGGATACTGATCAACACTTCATCTTCTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: PLPSRRVERFGR*WILINTSSSGF Trigger: GAAGCCAGAAGATGAAGTGTTGATCAGTATCCAGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCAAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 72 bp | TGTGAAGACTCGGAGCAGGAACTCGCCAGTGTGGCCTaGCTCAAAGGTGGTAGGGATGATAACGTAGCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: CEDSEQELASVA*LKGGRDDNVAA Trigger: GGCCGCTACGTTATCATCCCTACCACCTTTGAGCCAGGCCACACTGGCGAGTTCCTGCTCCGAGTCTTCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CAA 72 bp | GGGTTCCTCAGACGGATCATATCAAGCTTCTCTGACTaGAAGAAGGCCAGCAGGCCATGGCCCAGGCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: GFLRRIISSFSD*KKASRPWPRRT Trigger: GGTGCGCCTGGGCCATGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGATATGATCCGTCTGAGGAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 72 bp | GGTTCCTCAGACGGATCATATCAAGCTTCTCTGACTTaGAGAAGGCCAGCAGGCCATGGCCCAGGCGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GSSDGSYQASLT*RRPAGHGPGAP Trigger: AGGTGCGCCTGGGCCATGGCCTGCTGGCCTTCTTCAAGTCAGAGAAGCTTGATATGATCCGTCTGAGGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 72 bp | TTGCCCTCCCGGCGAGTTGAGCGCTTCGGCCGCTGCTaGATACTGATCAACACTTCATCTTCTGGCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LPSRRVERFGRC*ILINTSSSGFL Trigger: CAAGAAGCCAGAAGATGAAGTGTTGATCAGTATCCAGCAGCGGCCGAAGCGCTCAACTCGCCGGGAGGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CCA 72 bp | GGCGGTTCTCTTCCACCTTATAGATGTCGAAGCCAATaGCCAGATTCTCGCCTTTGCCCTCCCGGCGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GGSLPPYRCRSQ*PDSRLCPPGEL Trigger: CAACTCGCCGGGAGGGCAAAGGCGAGAATCTGGCCATTGGCTTCGACATCTATAAGGTGGAAGAGAACCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS TCA 72 bp | CCTCGGTCAGGTCAATGGGTTCAGAAACACCACCTGTaGAATCCACCAATGCATCGGCCGTGTTGCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PRSGQWVQKHHL*NPPMHRPCCLR Trigger: ACGGAGGCAACACGGCCGATGCATTGGTGGATTTCACAGGTGGTGTTTCTGAACCCATTGACCTGACCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS GCA 72 bp | AATGGGTTCAGAAACACCACCTGTGAAATCCACCAATaGATCGGCCGTGTTGCCTCCGTCCAGGGCCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: NGFRNTTCEIHQ*IGRVASVQGLV Trigger: TACCAGGCCCTGGACGGAGGCAACACGGCCGATGCATTGGTGGATTTCACAGGTGGTGTTTCTGAACCCATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CAA 90 bp | GAGGTCCCTCTCTGCACAGCTGAGCGAACCTTTTCGCCCTCACACTaGATGATCACATATGAGTTTGCTCCTGTTGGGGAGTCCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: EVPLCTAERTFSPSH*MITYEFAPVGESLR Trigger: CCTCAAGGACTCCCCAACAGGAGCAAACTCATATGTGATCATCAAGTGTGAGGGCGAAAAGGTTCGCTCAGCTGTGCAGAGAGGGACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS TCA 72 bp | ATTGTACTCTGGTGTCGAGGTCCCTCTCTGCACAGCTaGGCGAACCTTTTCGCCCTCACACTTGATGATCAC | + |
|
Preference number: 6 (lower is better) Translates to: IVLWCRGPSLHS*ANLFALTLDDH Trigger: GTGATCATCAAGTGTGAGGGCGAAAAGGTTCGCTCAGCTGTGCAGAGAGGGACCTCGACACCAGAGTACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS GCA 72 bp | CCTTTTACATTGTACTCTGGTGTCGAGGTCCCTCTCTaGACAGCTGAGCGAACCTTTTCGCCCTCACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: PFTLYSGVEVPL*TAERTFSPSHL Trigger: CAAGTGTGAGGGCGAAAAGGTTCGCTCAGCTGTGCAGAGAGGGACCTCGACACCAGAGTACAATGTAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CCA 72 bp | AATACGTACTGTGGGTTCTGGAAGAAAGTGTCCTTGTaGTTGATGCAGCCTCCACTGCGGTTCTGCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NTYCGFWKKVSL*LMQPPLRFCCG Trigger: CCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACACTTTCTTCCAGAACCCACAGTACGTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CAA 90 bp | ACTTCAAATACGTACTGTGGGTTCTGGAAGAAAGTGTCCTTGTGGTaGATGCAGCCTCCACTGCGGTTCTGCTGTGGGTCCTCATGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSNTYCGFWKKVSLW*MQPPLRFCCGSSCL Trigger: GAGACATGAGGACCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACACTTTCTTCCAGAACCCACAGTACGTATTTGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CAA 72 bp | CTCTGCACAGCTGAGCGAACCTTTTCGCCCTCACACTaGATGATCACATATGAGTTTGCTCCTGTTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCTAERTFSPSH*MITYEFAPVGE Trigger: CTCCCCAACAGGAGCAAACTCATATGTGATCATCAAGTGTGAGGGCGAAAAGGTTCGCTCAGCTGTGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
||
| CDS CAA 90 bp | TTCTTGACTTCAAATACGTACTGTGGGTTCTGGAAGAAAGTGTCCTaGTGGTTGATGCAGCCTCCACTGCGGTTCTGCTGTGGGTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: FLTSNTYCGFWKKVS*WLMQPPLRFCCGSS Trigger: TGAGGACCCACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACACTTTCTTCCAGAACCCACAGTACGTATTTGAAGTCAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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| CDS CAA 72 bp | TCAAATACGTACTGTGGGTTCTGGAAGAAAGTGTCCTaGTGGTTGATGCAGCCTCCACTGCGGTTCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SNTYCGFWKKVS*WLMQPPLRFCC Trigger: ACAGCAGAACCGCAGTGGAGGCTGCATCAACCACAAGGACACTTTCTTCCAGAACCCACAGTACGTATTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040971.14 ENSMUST00000107112.2 |
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