Pregenerated sensors for CAPN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026509Ensembl transcript IDs: ENSMUST00000068505.10
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTTACTATTTGCCCAGTTATTTAAAGCTCTCTGCATTCCTTCCTaGTTTAATATTGCTATGGCCAGGACAATGTGTAGAAGTAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: GLLFAQLFKALCIPS*FNIAMARTMCRSKK Trigger: CTTTTTACTTCTACACATTGTCCTGGCCATAGCAATATTAAATCAGGAAGGAATGCAGAGAGCTTTAAATAACTGGGCAAATAGTAAACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR CAA 90 bp | ATTTATTTTCTGAGATCGGGTCTTGCTAGGCAGCCCAGGTTGGCCTaGTGTCAGACACTCCTGGCTCCTGGATTCTTTAGATGCCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: IYFLRSGLARQPRLA*CQTLLAPGFFRCLH Trigger: ATGGAGGCATCTAAAGAATCCAGGAGCCAGGAGTGTCTGACACAAGGCCAACCTGGGCTGCCTAGCAAGACCCGATCTCAGAAAATAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR-3UTR CCA 90 bp | CTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGACGGTCTAAGTGTAGTCATTaGCTGTTTTCTTCCACTAGA | + |
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Preference number: 2 (lower is better) Translates to: LPSCRHSPWGLSRSSCRRSKCSH*LFSSTR Trigger: TCTAGTGGAAGAAAACAGCCAATGACTACACTTAGA...CCGTCTGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR-3UTR GCA 90 bp | TGGGGTTTATCACGATCTTCTTGCAGACGGCACACCTGGCTCAGTTGGTCAGAGCCTTACCAAGGGTTATaGAATTCATTTGCATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: WGLSRSSCRRHTWLSWSEPYQGL*NSFAFG Trigger: ACCAAATGCAAATGAATTGCATAACCCTTGGTAAGG...CTCTGACCAACTGAGCCAGGTGTGCCGTCTGCAAGAAGATCGTGATAAACCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR-3UTR TCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGTTGGCATTTATTTTCTaGGATCGGGTCTTGCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: GNMSVWLLAFSQDEEASLLAFIF*DRVLLG Trigger: GCCTAGCAAGACCCGATCTCAGAAAATAAATGCCAA...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR CAA 90 bp | CTACTTGTCAGACCTAAGTGTCTAAGGCCAAATATGGTCAAGGACTaGAGTTTAAGAATGCTAAAGGTATATAAAAACCATCTTCTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LLVRPKCLRPNMVKD*SLRMLKVYKNHLLL Trigger: TAACAGAAGATGGTTTTTATATACCTTTAGCATTCTTAAACTCAAGTCCTTGACCATATTTGGCCTTAGACACTTAGGTCTGACAAGTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCAAATATTCCCATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTGATTTAATATTGCTATaGCCAGGACAATGTGTAGAA | + |
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Preference number: 2 (lower is better) Translates to: FFKYSHQGLVASEIGLLFDLILL*PGQCVE Trigger: TTCTACACATTGTCCTGGCCATAGCAATATTAAATC...AAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATGGGAATATTTGAAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR CCA 72 bp | CTGAGCCCTGTCCTCCCCAGCTGTAGGCACAGTCCCTaGGGTTTATCACGATCTTCTTGCAGACGGCACACC | + |
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Preference number: 3 (lower is better) Translates to: LSPVLPSCRHSP*GLSRSSCRRHT Trigger: GGTGTGCCGTCTGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAGGACAGGGCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR CCA 72 bp | GTATTTCTCAGTTCGCTCAGGGCAAGCGGCAGTCTCTaGGCTGCTGTGGCAGGTGCCACCACTGCATTTAAA | + |
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Preference number: 3 (lower is better) Translates to: VFLSSLRASGSL*AAVAGATTAFK Trigger: TTTAAATGCAGTGGTGGCACCTGCCACAGCAGCCCAGAGACTGCCGCTTGCCCTGAGCGAACTGAGAAATAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR CCA 72 bp | GTTCGCTCAGGGCAAGCGGCAGTCTCTGGGCTGCTGTaGCAGGTGCCACCACTGCATTTAAAAGTTAAAATT | + |
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Preference number: 3 (lower is better) Translates to: VRSGQAAVSGLL*QVPPLHLKVKI Trigger: AATTTTAACTTTTAAATGCAGTGGTGGCACCTGCCACAGCAGCCCAGAGACTGCCGCTTGCCCTGAGCGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR GCA 72 bp | TTGTGTCAGACACTCCTGGCTCCTGGATTCTTTAGATaGCTCCATCAGACTGGGTTCTTTAGATGCCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: LCQTLLAPGFFR*LHQTGFFRCLH Trigger: ATGGAGGCATCTAAAGAACCCAGTCTGATGGAGGCATCTAAAGAATCCAGGAGCCAGGAGTGTCTGACACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR TCA 72 bp | TCTTGCAGACGGCACACCTGGCTCAGTTGGTCAGAGTaGTCTCATTACTTACTACTTGTCAGACCTAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: SCRRHTWLSWSE*SHYLLLVRPKC Trigger: ACACTTAGGTCTGACAAGTAGTAAGTAATGAGATCACTCTGACCAACTGAGCCAGGTGTGCCGTCTGCAAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR CCA 72 bp | TCAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTaGCTGTTTTCTTCCACTAGACCTCTCCAGGCATGT | + |
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Preference number: 3 (lower is better) Translates to: SRSRYKVSKCSH*LFSSTRPLQAC Trigger: ACATGCCTGGAGAGGTCTAGTGGAAGAAAACAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR GCA 72 bp | TTCTTTAGATGCCTCCATCAGACTGGGTTCTTTAGATaGCTCCATCAGACTACTTCGTCATTGTATTTCTCA | + |
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Preference number: 3 (lower is better) Translates to: FFRCLHQTGFFR*LHQTTSSLYFS Trigger: TGAGAAATACAATGACGAAGTAGTCTGATGGAGGCATCTAAAGAACCCAGTCTGATGGAGGCATCTAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR TCA 72 bp | CAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATaGAGAAGCCAGCTTGGTTGTTTTAAGAAGATCTTC | + |
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Preference number: 3 (lower is better) Translates to: QYVCMVASIFPG*RSQLGCFKKIF Trigger: GAAGATCTTCTTAAAACAACCAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | GTTCGCTCAGGGCAAGCGGCAGTCTCTGGGCTGCTGTGGCAGGTGCCACCACTGATTCCTGCAGCCCCCTaGGGTGGAGCCTCGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VRSGQAAVSGLLWQVPPLIPAAP*GGASPP Trigger: TGGAGGCGAGGCTCCACCGCAGGGGGCTGCAGGAAT...CAGTGGTGGCACCTGCCACAGCAGCCCAGAGACTGCCGCTTGCCCTGAGCGAAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | GTTCGCTCAGGGCAAGCGGCAGTCTCTGGGCTGCTGTGGCAGGTGCCACCACTGGTCCCCAGGGATTCCTaGTGCGGATCAATTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VRSGQAAVSGLLWQVPPLVPRDS*CGSISA Trigger: TGCAGAAATTGATCCGCATCAGGAATCCCTGGGGAC...CAGTGGTGGCACCTGCCACAGCAGCCCAGAGACTGCCGCTTGCCCTGAGCGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | CTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGACGGTTGATGGCTCTCTCATaGGACCCCAGCCCCTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: LPSCRHSPWGLSRSSCRRLMALS*DPSPSA Trigger: GGCCGAGGGGCTGGGGTCGCATGAGAGAGCCATCAA...CCGTCTGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | CTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGACGGTCGCCCATCTTCCTCTaGCGTCGCCGGTGCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPSCRHSPWGLSRSSCRRSPIFL*RRRCFW Trigger: CCAGAAGCACCGGCGACGGCAGAGGAAGATGGGCGA...CCGTCTGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | CAAGCGGCAGTCTCTGGGCTGCTGTGGCAGGTGCCACCACTGCATTTAAAAGTTCCTCCTCGGCTCCGGTaGCAGAGTACGCATGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: QAAVSGLLWQVPPLHLKVPPRLR*QSTHVL Trigger: AAGGACATGCGTACTCTGTCACCGGAGCCGAGGAGG...AACTTTTAAATGCAGTGGTGGCACCTGCCACAGCAGCCCAGAGACTGCCGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | CAAGCGGCAGTCTCTGGGCTGCTGTGGCAGGTGCCACCACTGCATTTAAAAGTTCTTCAAAGCCTTCCGTaGTGGCACCCCCTGAGAGTG | + |
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Preference number: 4 (lower is better) Translates to: QAAVSGLLWQVPPLHLKVLQSLP*WHPLRV Trigger: CACTCTCAGGGGGTGCCACCACGGAAGGCTTTGAAG...AACTTTTAAATGCAGTGGTGGCACCTGCCACAGCAGCCCAGAGACTGCCGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGCCGCTTCCATTCGATaGCCCGAGTTTTGCTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LSSPAVGTVPGVYHDLLAAASIR*PEFCWS Trigger: ACTCCAGCAAAACTCGGGGCATCGAATGGAAGCGGC...TGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAGGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | CAAGCGGCAGTCTCTGGGCTGCTGTGGCAGGTGCCACCACTGCATTTAAAAGTTCTCCCTTCAGCTGAATaGACAAAGAGCAGCTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: QAAVSGLLWQVPPLHLKVLPSAE*TKSSSP Trigger: CGGGGAGCTGCTCTTTGTGCATTCAGCTGAAGGGAG...AACTTTTAAATGCAGTGGTGGCACCTGCCACAGCAGCCCAGAGACTGCCGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGTGCAGCCCCCTGCGGTaGAGCCTCGCCTCCAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLCSPLR*SLASSS Trigger: GGAACTGGAGGCGAGGCTCCACCGCAGGGGGCTGCA...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR CAA 72 bp | CTGAGATCGGGTCTTGCTAGGCAGCCCAGGTTGGCCTaGTGTCAGACACTCCTGGCTCCTGGATTCTTTAGA | + |
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Preference number: 4 (lower is better) Translates to: LRSGLARQPRLA*CQTLLAPGFFR Trigger: TCTAAAGAATCCAGGAGCCAGGAGTGTCTGACACAAGGCCAACCTGGGCTGCCTAGCAAGACCCGATCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | CTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGACGGACCCACTCGCCATATTaGCAGAACTGGAAGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LPSCRHSPWGLSRSSCRRTHSPY*QNWKWK Trigger: CTTCCACTTCCAGTTCTGGCAATATGGCGAGTGGGT...CCGTCTGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | CTGTCCTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCACCTTCAGGCCAAGCTTaGCACTCCCATCTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: LSSPAVGTVPGVYHDLLAPSGQA*HSHLHP Trigger: TGGATGAAGATGGGAGTGGCAAGCTTGGCCTGAAGG...TGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | TGGGGTTTATCACGATCTTCTTGCAGACGGCACACCTGGCTCAGTTGGTCAGAGAGGTGGATGTTGGTCTaGCCTGTTAGCTCCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: WGLSRSSCRRHTWLSWSERWMLV*PVSSSG Trigger: TCCAGAGGAGCTAACAGGGCAGACCAACATCCACCT...CTCTGACCAACTGAGCCAGGTGTGCCGTCTGCAAGAAGATCGTGATAAACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGTATAGGAGTCACAGGTaGGGGTGTCCGGGGTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLYRSHR*GCPGSG Trigger: ACCTGACCCCGGACACCCTCACCTGTGACTCCTATA...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | GTTCCCGTAAGTTCAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGGCCGGTGCTTCTGGATaGGACCCACCAGGAAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: VPVSSRSRYKVSKCSHWLAGASG*DPPGRY Trigger: GTACCTTCCTGGTGGGTCTCATCCAGAAGCACCGGC...CAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTGAACTTACGGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGCTGGAAGCTCTGATCTaGAGGCACAACCCGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLLEALI*RHNPSQ Trigger: CTGGCTCGGGTTGTGCCTCCAGATCAGAGCTTCCAG...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | AAGGATATACTATTTACAGGTGTAACGCTTCCTCTGACCTTACCAAGGGTTATGCGTGGTGGCACCCCCTaGGAGTGCTTCATAGCACCC | + |
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Preference number: 4 (lower is better) Translates to: KDILFTGVTLPLTLPRVMRGGTP*ECFIAP Trigger: GGGTGCTATGAAGCACTCTCAGGGGGTGCCACCACG...CATAACCCTTGGTAAGGTCAGAGGAAGCGTTACACCTGTAAATAGTATATCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | AAGGATATACTATTTACAGGTGTAACGCTTCCTCTGACCTTACCAAGGGTTATGCTTATAGCCCAAGGATaGCGGCAGGGCGGGGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: KDILFTGVTLPLTLPRVMLIAQG*RQGGEG Trigger: TCCTTCCCCGCCCTGCCGTCATCCTTGGGCTATAAG...CATAACCCTTGGTAAGGTCAGAGGAAGCGTTACACCTGTAAATAGTATATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGTTTCTGCAGGCTTCCTaGACTTTCAACCTCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLFLQAS*TFNLLG Trigger: GCCGAGGAGGTTGAAAGTTCAGGAAGCCTGCAGAAA...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGCCTCCAATAATGAACTaGGGGTCAGCGCAGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLPPIMN*GSAQIS Trigger: GGAGATCTGCGCTGACCCCCAGTTCATTATTGGAGG...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | CAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGTTTTCTTCCACTACGTCGCCGGTGCTTCTaGATGAGACCCACCAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: QGPDTKCLSVVIGCFLPLRRRCF*MRPTRK Trigger: CTTCCTGGTGGGTCTCATCCAGAAGCACCGGCGACG...TAGTGGAAGAAAACAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | GTTCCCGTAAGTTCAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGCTCACTCCCTTCAGCTaGATGCACAAAGAGCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VPVSSRSRYKVSKCSHWLLTPFS*MHKEQL Trigger: GAGCTGCTCTTTGTGCATTCAGCTGAAGGGAGTGAG...CAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTGAACTTACGGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGGATGCTGAAGCCGTCTaGCTTGATGTCTTGGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLDAEAV*LDVLAF Trigger: AAACGCCAAGACATCAAGTCAGACGGCTTCAGCATC...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | AAGGATATACTATTTACAGGTGTAACGCTTCCTCTGACCTTACCAAGGGTTATGTGTCCGGGGTCAGGTTaGAGATCTCCAGGCGAGAGT | + |
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Preference number: 4 (lower is better) Translates to: KDILFTGVTLPLTLPRVMCPGSG*RSPGES Trigger: ACTCTCGCCTGGAGATCTGCAACCTGACCCCGGACA...CATAACCCTTGGTAAGGTCAGAGGAAGCGTTACACCTGTAAATAGTATATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGCAACCGTGTTCCAGCTaGGGCAATTGTCATTCCACT | + |
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Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLQPCSS*GNCHST Trigger: AGTGGAATGACAATTGCCCCAGCTGGAACACGGTTG...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| 3UTR CAA 72 bp | ATCACGATCTTCTTGCAGACGGCACACCTGGCTCAGTaGGTCAGAGTGATCTCATTACTTACTACTTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: ITIFLQTAHLAQ*VRVISLLTTCQ Trigger: CTGACAAGTAGTAAGTAATGAGATCACTCTGACCAACTGAGCCAGGTGTGCCGTCTGCAAGAAGATCGTGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | CATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTGCCCAGTTATTTAAATTTCCTCATTCAAGGTaGGGGAGGCGATGGCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HQGLVASEIGLLFAQLFKFPHSR*GRRWQP Trigger: TGGCTGCCATCGCCTCCCTCACCTTGAATGAGGAAA...TTTAAATAACTGGGCAAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | GTTCCCGTAAGTTCAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGGTCTCAGGAAGTCACTaGAGGACATCCAGAATTCTC | + |
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Preference number: 4 (lower is better) Translates to: VPVSSRSRYKVSKCSHWLVSGSH*RTSRIL Trigger: GAGAATTCTGGATGTCCTTCAGTGACTTCCTGAGAC...CAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTGAACTTACGGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | AAGGATATACTATTTACAGGTGTAACGCTTCCTCTGACCTTACCAAGGGTTATGGTTGACAGGGCAGCTTaGAACCTGCTTCTTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KDILFTGVTLPLTLPRVMVDRAA*NLLLPV Trigger: CACTGGAAGAAGCAGGTTTCAAGCTGCCCTGTCAAC...CATAACCCTTGGTAAGGTCAGAGGAAGCGTTACACCTGTAAATAGTATATCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | AAGGATATACTATTTACAGGTGTAACGCTTCCTCTGACCTTACCAAGGGTTATGAAAGGCAGAGATCTCTaGATCCTCTCCAGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: KDILFTGVTLPLTLPRVMKGRDL*ILSSQL Trigger: CAGCTGGCTGGAGAGGATGCAGAGATCTCTGCCTTT...CATAACCCTTGGTAAGGTCAGAGGAAGCGTTACACCTGTAAATAGTATATCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGCTTCTTAAGATGGTCTaGAGCTCAAAGGCAGAGATC | + |
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Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLLLKMV*SSKAEI Trigger: GATCTCTGCCTTTGAGCTGCAGACCATCTTAAGAAG...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | CATCTATCCCAGACGGTTATATTCTTCAGTTATAATCATCCGATGAAGTCAATGCAAAGCCTTCCGTGGTaGCACCCCCTGAGAGTGCTT | + |
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Preference number: 4 (lower is better) Translates to: HLSQTVIFFSYNHPMKSMQSLPW*HPLRVL Trigger: AAGCACTCTCAGGGGGTGCCACCACGGAAGGCTTTG...CATTGACTTCATCGGATGATTATAACTGAAGAATATAACCGTCTGGGATAGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGGAACTCTTCTTAAGATaGTCTGCAGCTCAAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLELFLR*SAAQRQ Trigger: CTGCCTTTGAGCTGCAGACCATCTTAAGAAGAGTTC...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | GTTCCCGTAAGTTCAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGCTTCATAGCACCCATTaGTCTTGGCATAGGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPVSSRSRYKVSKCSHWLLHSTH*SWHRLS Trigger: AGAAAGCCTATGCCAAGATCAATGGGTGCTATGAAG...CAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTGAACTTACGGGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | CATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTGCCCAGTTATTTAAACAGCAATGCCTCCTGTaGAGTCTTCAAAGCCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HQGLVASEIGLLFAQLFKQQCLL*SLQSLP Trigger: CGGAAGGCTTTGAAGACTTCACAGGAGGCATTGCTG...TTTAAATAACTGGGCAAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | CATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTGCCCAGTTATTTAAATCCTCTCCAGCCAGCTaGACAAAGAGCCTTCGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: HQGLVASEIGLLFAQLFKSSPAS*TKSLRN Trigger: ATTCCGAAGGCTCTTTGTTCAGCTGGCTGGAGAGGA...TTTAAATAACTGGGCAAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR GCA 90 bp | GGCAATATGTCTGTATGGTTGCTAGCATTTTCCCAGGATGAAGAAGCCAGCTTGATGCGGATCAATTTCTaGAGGCTTCCTGAACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNMSVWLLAFSQDEEASLMRINF*RLPELS Trigger: TGAAAGTTCAGGAAGCCTGCAGAAATTGATCCGCAT...CAAGCTGGCTTCTTCATCCTGGGAAAATGCTAGCAACCATACAGACATATTGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | CAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGTTTTCTTCCACTACATCCAGAAGGTATTTaGGTAATTCCTGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QGPDTKCLSVVIGCFLPLHPEGI*VIPAAP Trigger: GGGGGCTGCAGGAATTACCCAAATACCTTCTGGATG...TAGTGGAAGAAAACAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | TTCTTCAAATATTCCCATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTAGATGCCGAAGCCAATaGTGTGCATGTCCTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FFKYSHQGLVASEIGLLFRCRSQ*CACPRP Trigger: TGGGCGAGGACATGCACACCATTGGCTTCGGCATCT...AAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATGGGAATATTTGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | CATCTATCCCAGACGGTTATATTCTTCAGTTATAATCATCCGATGAAGTCAATGTGCCGAGGTGGATGTTaGTCTGCCCTGTTAGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSQTVIFFSYNHPMKSMCRGGC*SALLAP Trigger: AGGAGCTAACAGGGCAGACCAACATCCACCTCGGCA...CATTGACTTCATCGGATGATTATAACTGAAGAATATAACCGTCTGGGATAGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | TTCTTCAAATATTCCCATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTCCCTGGCTCGGGTTGTaGGGAAAAAGTTTTTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: FFKYSHQGLVASEIGLLFPWLGL*GKSFCR Trigger: TCGGCAAAAACTTTTTCCTCACAACCCGAGCCAGGG...AAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATGGGAATATTTGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | CAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGTTTTCTTCCACTACCATATTGCCAGAACTaGAAGTGGAAGATGCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGPDTKCLSVVIGCFLPLPYCQN*KWKMPA Trigger: TGCAGGCATCTTCCACTTCCAGTTCTGGCAATATGG...TAGTGGAAGAAAACAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CCA 90 bp | AAGGATATACTATTTACAGGTGTAACGCTTCCTCTGACCTTACCAAGGGTTATGAAGTTTTTGCCGAGGTaGATGTTGGTCTGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KDILFTGVTLPLTLPRVMKFLPR*MLVCPV Trigger: AACAGGGCAGACCAACATCCACCTCGGCAAAAACTT...CATAACCCTTGGTAAGGTCAGAGGAAGCGTTACACCTGTAAATAGTATATCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR TCA 90 bp | CATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTGCCCAGTTATTTAAAAGCTTAATTAGGTACTaGGGGTTCATCCAGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: HQGLVASEIGLLFAQLFKSLIRY*GFIQKV Trigger: TACCTTCTGGATGAACCCTCAGTACCTAATTAAGCT...TTTAAATAACTGGGCAAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CCA 90 bp | GTGTGCATGTCCTCGCCCATCTTCCTCTGCCGTCGCCGGTGCTTCTaGATGAGACCCACCAGGAAGGTACAGCCTCTCTCCCCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCMSSPIFLCRRRCF*MRPTRKVQPLSPSS Trigger: GGAGGATGGGGAGAGAGGCTGTACCTTCCTGGTGGGTCTCATCCAGAAGCACCGGCGACGGCAGAGGAAGATGGGCGAGGACATGCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 90 bp | GCATGTCCTCGCCCATCTTCCTCTGCCGTCGCCGGTGCTTCTGGATaGGACCCACCAGGAAGGTACAGCCTCTCTCCCCATCCTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ACPRPSSSAVAGASG*DPPGRYSLSPHPPH Trigger: ATGAGGAGGATGGGGAGAGAGGCTGTACCTTCCTGGTGGGTCTCATCCAGAAGCACCGGCGACGGCAGAGGAAGATGGGCGAGGACATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS GCA 90 bp | CCAATGGTGTGCATGTCCTCGCCCATCTTCCTCTGCCGTCGCCGGTaGTTCTGGATGAGACCCACCAGGAAGGTACAGCCTCTCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PMVCMSSPIFLCRRR*FWMRPTRKVQPLSP Trigger: TGGGGAGAGAGGCTGTACCTTCCTGGTGGGTCTCATCCAGAAGCACCGGCGACGGCAGAGGAAGATGGGCGAGGACATGCACACCATTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGACGGGGCAGCTTGAAGCGGTaGAGGACCTCGCGGAGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LPSCRHSPWGLSRSSCRRGSLKR*RTSRRL Trigger: TAACCTCCGCGAGGTCCTCAACCGCTTCAAGCTGCC...CCGTCTGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 90 bp | TGGGAGGAGGCTTCCTCAGCTCATACCACTCAGCAATGCCTCCTGTaGAGTCTTCAAAGCCTTCCGTGGTGGCACCCCCTGAGAGTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: WEEASSAHTTQQCLL*SLQSLPWWHPLRVL Trigger: AAGCACTCTCAGGGGGTGCCACCACGGAAGGCTTTGAAGACTTCACAGGAGGCATTGCTGAGTGGTATGAGCTGAGGAAGCCTCCTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCACCCGGTCCACTCTACTaGTCCCCAGGGATTCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LSSPAVGTVPGVYHDLLAPGPLY*SPGIPD Trigger: ATCAGGAATCCCTGGGGACAAGTAGAGTGGACCGGG...TGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | GTTCGCTCAGGGCAAGCGGCAGTCTCTGGGCTGCTGTGGCAGGTGCCACCACTGTCAGGGTCTAGCTGCTaGAATATCTTGAATAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRSGQAAVSGLLWQVPPLSGSSC*NILNSV Trigger: AACGCTATTCAAGATATTCAAGCAGCTAGACCCTGA...CAGTGGTGGCACCTGCCACAGCAGCCCAGAGACTGCCGCTTGCCCTGAGCGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS GCA 90 bp | CTGAGGGTTCATCCAGAAGGTATTTGGGTAATTCCTGCAGCCCCCTaGGGTGGAGCCTCGCCTCCAGTTCCCATCCATCTTGGTGAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRVHPEGIWVIPAAP*GGASPPVPIHLGEF Trigger: AAACTCACCAAGATGGATGGGAACTGGAGGCGAGGCTCCACCGCAGGGGGCTGCAGGAATTACCCAAATACCTTCTGGATGAACCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGACGGTCCTGGTTGAGGTACTaGATGGCTCTCTCATGCGAC | + |
|
Preference number: 5 (lower is better) Translates to: LPSCRHSPWGLSRSSCRRSWLRY*MALSCD Trigger: GTCGCATGAGAGAGCCATCAAGTACCTCAACCAGGA...CCGTCTGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 90 bp | CAGCTTGAAGCGGTTGAGGACCTCGCGGAGGTTAATGAAGGTATCTaGCCGCTCCCTGGCTCGGGTTGTGAGGAAAAAGTTTTTGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: QLEAVEDLAEVNEGI*PLPGSGCEEKVFAE Trigger: CTCGGCAAAAACTTTTTCCTCACAACCCGAGCCAGGGAGCGGTCAGATACCTTCATTAACCTCCGCGAGGTCCTCAACCGCTTCAAGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CTGTCCTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGCCTTCTGGATGATCTaGAACAAGTTGGGAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSSPAVGTVPGVYHDLLAAFWMI*NKLGGG Trigger: GCCTCCTCCCAACTTGTTCAAGATCATCCAGAAGGC...TGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CCA 90 bp | GTTCGGTTAGATTTGCCCTTACTTCTGGGTCAACCGTGTTCCAGCTaGGGCAATTGTCATTCCACTTCCCGGTCCACTCTACTTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VRLDLPLLLGQPCSS*GNCHSTSRSTLLVP Trigger: GGGGACAAGTAGAGTGGACCGGGAAGTGGAATGACAATTGCCCCAGCTGGAACACGGTTGACCCAGAAGTAAGGGCAAATCTAACCGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 90 bp | TGTCATTCCACTTCCCGGTCCACTCTACTTGTCCCCAGGGATTCCTaGTGCGGATCAATTTCTGCAGGCTTCCTGAACTTTCAACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CHSTSRSTLLVPRDS*CGSISAGFLNFQPP Trigger: AGGAGGTTGAAAGTTCAGGAAGCCTGCAGAAATTGATCCGCATCAGGAATCCCTGGGGACAAGTAGAGTGGACCGGGAAGTGGAATGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CTCCCCAGCTGTAGGCACAGTCCCTGGGGTTTATCACGATCTTCTTGCAGACGGTTGATGTCTTGGCGTTaGGCTAGAACTCTTCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPSCRHSPWGLSRSSCRRLMSWR*ARTLLK Trigger: CTTAAGAAGAGTTCTAGCCAAACGCCAAGACATCAA...CCGTCTGCAAGAAGATCGTGATAAACCCCAGGGACTGTGCCTACAGCTGGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | TGGGGTTTATCACGATCTTCTTGCAGACGGCACACCTGGCTCAGTTGGTCAGAGGATGACTTGATGAAGTaGACAGGGCAGCTTGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: WGLSRSSCRRHTWLSWSEDDLMK*TGQLET Trigger: GGTTTCAAGCTGCCCTGTCAACTTCATCAAGTCATC...CTCTGACCAACTGAGCCAGGTGTGCCGTCTGCAAGAAGATCGTGATAAACCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS GCA 90 bp | GAAGCAAGGTTGAGCTGTATCGTTCCAGTGTTCTCAGGGTCTAGCTaGTTGAATATCTTGAATAGCGTTTCCAGACGGACCAAACACCGC | + |
|
Preference number: 5 (lower is better) Translates to: EARLSCIVPVFSGSS*LNILNSVSRRTKHR Trigger: GCGGTGTTTGGTCCGTCTGGAAACGCTATTCAAGATATTCAAGCAGCTAGACCCTGAGAACACTGGAACGATACAGCTCAACCTTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CCA 90 bp | GCTGAACAAAGAGCCTTCGGAATCCATCGTCAATGTCCTCCTCATTaGCGTCAATCTCTTCAATGTTGGCCTCGATCTCGTCATCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: AEQRAFGIHRQCPPH*RQSLQCWPRSRHQQ Trigger: CTGTTGATGACGAGATCGAGGCCAACATTGAAGAGATTGACGCCAATGAGGAGGACATTGACGATGGATTCCGAAGGCTCTTTGTTCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CCA 90 bp | ATCCATCGTCAATGTCCTCCTCATTGGCGTCAATCTCTTCAATGTTaGCCTCGATCTCGTCATCAACAGCTTGGTAGTCAGCCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IHRQCPPHWRQSLQC*PRSRHQQLGSQPSS Trigger: AGAAGAAGGCTGACTACCAAGCTGTTGATGACGAGATCGAGGCCAACATTGAAGAGATTGACGCCAATGAGGAGGACATTGACGATGGAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGTTTTCTTCCACTATTGCCGAGGTGGATGTaGGTCTGCCCTGTTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGPDTKCLSVVIGCFLPLLPRWM*VCPVSS Trigger: GGAGCTAACAGGGCAGACCAACATCCACCTCGGCAA...TAGTGGAAGAAAACAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGTTTTCTTCCACTATCCTTCAGGCCAAGCTaGCCACTCCCATCTTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: QGPDTKCLSVVIGCFLPLSFRPS*PLPSSS Trigger: GGATGAAGATGGGAGTGGCAAGCTTGGCCTGAAGGA...TAGTGGAAGAAAACAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGTTTTCTTCCACTACCGGGCAACGATGACTaGATGAAGTTGACAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QGPDTKCLSVVIGCFLPLPGNDD*MKLTGQ Trigger: CTGCCCTGTCAACTTCATCAAGTCATCGTTGCCCGG...TAGTGGAAGAAAACAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | TTCTTCAAATATTCCCATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTATGATCTTGAACAAGTaGGGAGGAGGCTTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FFKYSHQGLVASEIGLLFMILNK*GGGFLS Trigger: GCTGAGGAAGCCTCCTCCCAACTTGTTCAAGATCAT...AAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATGGGAATATTTGAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | AAGGATATACTATTTACAGGTGTAACGCTTCCTCTGACCTTACCAAGGGTTATGCAGTTCCCATCCATCTaGGTGAGTTTCCACTTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: KDILFTGVTLPLTLPRVMQFPSI*VSFHFL Trigger: TAAGAAGTGGAAACTCACCAAGATGGATGGGAACTG...CATAACCCTTGGTAAGGTCAGAGGAAGCGTTACACCTGTAAATAGTATATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | TTCTTCAAATATTCCCATCAAGGCCTTGTAGCCTCTGAGATTGGTTTACTATTTTCATCCAGAAGGTATTaGGGTAATTCCTGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: FFKYSHQGLVASEIGLLFSSRRY*GNSCSP Trigger: GGGGCTGCAGGAATTACCCAAATACCTTCTGGATGA...AAATAGTAAACCAATCTCAGAGGCTACAAGGCCTTGATGGGAATATTTGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | AAGGATATACTATTTACAGGTGTAACGCTTCCTCTGACCTTACCAAGGGTTATGAGCTGCTTGAATATCTaGAATAGCGTTTCCAGACGG | + |
|
Preference number: 5 (lower is better) Translates to: KDILFTGVTLPLTLPRVMSCLNI*NSVSRR Trigger: CCGTCTGGAAACGCTATTCAAGATATTCAAGCAGCT...CATAACCCTTGGTAAGGTCAGAGGAAGCGTTACACCTGTAAATAGTATATCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | CATCTATCCCAGACGGTTATATTCTTCAGTTATAATCATCCGATGAAGTCAATGGTGAGGAAAAAGTTTTaGCCGAGGTGGATGTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HLSQTVIFFSYNHPMKSMVRKKF*PRWMLV Trigger: GACCAACATCCACCTCGGCAAAAACTTTTTCCTCAC...CATTGACTTCATCGGATGATTATAACTGAAGAATATAACCGTCTGGGATAGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS-3UTR CAA 90 bp | GTTCCCGTAAGTTCAAGGTCCAGATACAAAGTGTCTAAGTGTAGTCATTGGCTGTTCCCGGTAGATTTTTaGGTATTTCTGAATCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VPVSSRSRYKVSKCSHWLFPVDF*VFLNLR Trigger: ACGAAGATTCAGAAATACCAAAAAATCTACCGGGAA...CAGCCAATGACTACACTTAGACACTTTGTATCTGGACCTTGAACTTACGGGAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 72 bp | CGCCCATCTTCCTCTGCCGTCGCCGGTGCTTCTGGATaGGACCCACCAGGAAGGTACAGCCTCTCTCCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: RPSSSAVAGASG*DPPGRYSLSPH Trigger: ATGGGGAGAGAGGCTGTACCTTCCTGGTGGGTCTCATCCAGAAGCACCGGCGACGGCAGAGGAAGATGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS GCA 72 bp | GGTCAGCGCAGATCTCCGTGGGCCGCTTCCATTCGATaGCCCGAGTTTTGCTGGAGTAGGGCCCCAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GQRRSPWAASIR*PEFCWSRAPTP Trigger: AGGAGTTGGGGCCCTACTCCAGCAAAACTCGGGGCATCGAATGGAAGCGGCCCACGGAGATCTGCGCTGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CCA 72 bp | TCCTCGCCCATCTTCCTCTGCCGTCGCCGGTGCTTCTaGATGAGACCCACCAGGAAGGTACAGCCTCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSPIFLCRRRCF*MRPTRKVQPLS Trigger: GGAGAGAGGCTGTACCTTCCTGGTGGGTCTCATCCAGAAGCACCGGCGACGGCAGAGGAAGATGGGCGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS GCA 72 bp | TGCATGTCCTCGCCCATCTTCCTCTGCCGTCGCCGGTaGTTCTGGATGAGACCCACCAGGAAGGTACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: CMSSPIFLCRRR*FWMRPTRKVQP Trigger: AGGCTGTACCTTCCTGGTGGGTCTCATCCAGAAGCACCGGCGACGGCAGAGGAAGATGGGCGAGGACATGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS GCA 72 bp | AAGCCAATGGTGTGCATGTCCTCGCCCATCTTCCTCTaGCGTCGCCGGTGCTTCTGGATGAGACCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KPMVCMSSPIFL*RRRCFWMRPTR Trigger: CCTGGTGGGTCTCATCCAGAAGCACCGGCGACGGCAGAGGAAGATGGGCGAGGACATGCACACCATTGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CCA 72 bp | GGATGCAGAAATCGCCATCCTTGTGGGGTTCGAAGGTaGAGGGAACGAGGACATACTCTCCCGGGGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GCRNRHPCGVRR*RERGHTLPGAA Trigger: AGCTGCCCCCGGGAGAGTATGTCCTCGTTCCCTCCACCTTCGAACCCCACAAGGATGGCGATTTCTGCATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS GCA 72 bp | ACTGAGGGTTCATCCAGAAGGTATTTGGGTAATTCCTaGAGCCCCCTGCGGTGGAGCCTCGCCTCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: TEGSSRRYLGNS*SPLRWSLASSS Trigger: GGAACTGGAGGCGAGGCTCCACCGCAGGGGGCTGCAGGAATTACCCAAATACCTTCTGGATGAACCCTCAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 72 bp | GACCGCTCCCTGGCTCGGGTTGTGAGGAAAAAGTTTTaGCCGAGGTGGATGTTGGTCTGCCCTGTTAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DRSLARVVRKKF*PRWMLVCPVSS Trigger: GGAGCTAACAGGGCAGACCAACATCCACCTCGGCAAAAACTTTTTCCTCACAACCCGAGCCAGGGAGCGGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 72 bp | GCGGTTGAGGACCTCGCGGAGGTTAATGAAGGTATCTaGCCGCTCCCTGGCTCGGGTTGTGAGGAAAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: AVEDLAEVNEGI*PLPGSGCEEKV Trigger: AACTTTTTCCTCACAACCCGAGCCAGGGAGCGGTCAGATACCTTCATTAACCTCCGCGAGGTCCTCAACCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 90 bp | AAGGTATCTGACCGCTCCCTGGCTCGGGTTGTGAGGAAAAAGTTTTaGCCGAGGTGGATGTTGGTCTGCCCTGTTAGCTCCTCTGGAACC | + |
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Preference number: 6 (lower is better) Translates to: KVSDRSLARVVRKKF*PRWMLVCPVSSSGT Trigger: GGTTCCAGAGGAGCTAACAGGGCAGACCAACATCCACCTCGGCAAAAACTTTTTCCTCACAACCCGAGCCAGGGAGCGGTCAGATACCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CCA 72 bp | CTGGCTCGGGTTGTGAGGAAAAAGTTTTTGCCGAGGTaGATGTTGGTCTGCCCTGTTAGCTCCTCTGGAACC | + |
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Preference number: 6 (lower is better) Translates to: LARVVRKKFLPR*MLVCPVSSSGT Trigger: GGTTCCAGAGGAGCTAACAGGGCAGACCAACATCCACCTCGGCAAAAACTTTTTCCTCACAACCCGAGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 72 bp | CTTACTTCTGGGTCAACCGTGTTCCAGCTGGGGCAATaGTCATTCCACTTCCCGGTCCACTCTACTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LTSGSTVFQLGQ*SFHFPVHSTCP Trigger: GGGACAAGTAGAGTGGACCGGGAAGTGGAATGACAATTGCCCCAGCTGGAACACGGTTGACCCAGAAGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 90 bp | AGATTTGCCCTTACTTCTGGGTCAACCGTGTTCCAGCTGGGGCAATaGTCATTCCACTTCCCGGTCCACTCTACTTGTCCCCAGGGATTC | + |
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Preference number: 6 (lower is better) Translates to: RFALTSGSTVFQLGQ*SFHFPVHSTCPQGF Trigger: GAATCCCTGGGGACAAGTAGAGTGGACCGGGAAGTGGAATGACAATTGCCCCAGCTGGAACACGGTTGACCCAGAAGTAAGGGCAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 72 bp | AGATCTCCAGGCGAGAGTAGTGTCTCAGGAAGTCACTaGAGGACATCCAGAATTCTCCGTCCTCCTGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: RSPGESSVSGSH*RTSRILRPPAV Trigger: AACGGCAGGAGGACGGAGAATTCTGGATGTCCTTCAGTGACTTCCTGAGACACTACTCTCGCCTGGAGATCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 72 bp | TGTGAAGTCTTCAAAGCCTTCCGTGGTGGCACCCCCTaGGAGTGCTTCATAGCACCCATTGATCTTGGCATA | + |
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Preference number: 6 (lower is better) Translates to: CEVFKAFRGGTP*ECFIAPIDLGI Trigger: TATGCCAAGATCAATGGGTGCTATGAAGCACTCTCAGGGGGTGCCACCACGGAAGGCTTTGAAGACTTCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS TCA 72 bp | ACTTCCCGGTCCACTCTACTTGTCCCCAGGGATTCCTaGTGCGGATCAATTTCTGCAGGCTTCCTGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: TSRSTLLVPRDS*CGSISAGFLNF Trigger: AAAGTTCAGGAAGCCTGCAGAAATTGATCCGCATCAGGAATCCCTGGGGACAAGTAGAGTGGACCGGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CCA 72 bp | AGAGCCTTCGGAATCCATCGTCAATGTCCTCCTCATTaGCGTCAATCTCTTCAATGTTGGCCTCGATCTCGT | + |
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Preference number: 6 (lower is better) Translates to: RAFGIHRQCPPH*RQSLQCWPRSR Trigger: ACGAGATCGAGGCCAACATTGAAGAGATTGACGCCAATGAGGAGGACATTGACGATGGATTCCGAAGGCTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 72 bp | CTCTTCAATGTTGGCCTCGATCTCGTCATCAACAGCTaGGTAGTCAGCCTTCTTCTCCGAGAAGACTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: LFNVGLDLVINS*VVSLLLREDSD Trigger: ATCCGAGTCTTCTCGGAGAAGAAGGCTGACTACCAAGCTGTTGATGACGAGATCGAGGCCAACATTGAAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 72 bp | AAGAGCCTTCGGAATCCATCGTCAATGTCCTCCTCATaGGCGTCAATCTCTTCAATGTTGGCCTCGATCTCG | + |
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Preference number: 6 (lower is better) Translates to: KSLRNPSSMSSS*ASISSMLASIS Trigger: CGAGATCGAGGCCAACATTGAAGAGATTGACGCCAATGAGGAGGACATTGACGATGGATTCCGAAGGCTCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 90 bp | GCAAGGTTGAGCTGTATCGTTCCAGTGTTCTCAGGGTCTAGCTGCTaGAATATCTTGAATAGCGTTTCCAGACGGACCAAACACCGCACA | + |
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Preference number: 6 (lower is better) Translates to: ARLSCIVPVFSGSSC*NILNSVSRRTKHRT Trigger: TGTGCGGTGTTTGGTCCGTCTGGAAACGCTATTCAAGATATTCAAGCAGCTAGACCCTGAGAACACTGGAACGATACAGCTCAACCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 72 bp | AGCAGAGAACCTTTCTCCAAAGCCTTCTGGATGATCTaGAACAAGTTGGGAGGAGGCTTCCTCAGCTCATAC | + |
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Preference number: 6 (lower is better) Translates to: SREPFSKAFWMI*NKLGGGFLSSY Trigger: GTATGAGCTGAGGAAGCCTCCTCCCAACTTGTTCAAGATCATCCAGAAGGCTTTGGAGAAAGGTTCTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 72 bp | GTTCCAGTGTTCTCAGGGTCTAGCTGCTTGAATATCTaGAATAGCGTTTCCAGACGGACCAAACACCGCACA | + |
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Preference number: 6 (lower is better) Translates to: VPVFSGSSCLNI*NSVSRRTKHRT Trigger: TGTGCGGTGTTTGGTCCGTCTGGAAACGCTATTCAAGATATTCAAGCAGCTAGACCCTGAGAACACTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 90 bp | AATATCTTGAATAGCGTTTCCAGACGGACCAAACACCGCACAAAATaGTCAAAGTCGATGATTAGCTCGTCGTCTGCAAACCGGGCAACG | + |
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Preference number: 6 (lower is better) Translates to: NILNSVSRRTKHRTK*SKSMISSSSANRAT Trigger: CGTTGCCCGGTTTGCAGACGACGAGCTAATCATCGACTTTGACAATTTTGTGCGGTGTTTGGTCCGTCTGGAAACGCTATTCAAGATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS GCA 72 bp | GATGACTTGATGAAGTTGACAGGGCAGCTTGAAACCTaGTTCTTCCAGTGCTTTCCGCATCTCGTAGGAATT | + |
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Preference number: 6 (lower is better) Translates to: DDLMKLTGQLET*FFQCFPHLVGI Trigger: AATTCCTACGAGATGCGGAAAGCACTGGAAGAAGCAGGTTTCAAGCTGCCCTGTCAACTTCATCAAGTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 90 bp | AGCTGTATCGTTCCAGTGTTCTCAGGGTCTAGCTGCTTGAATATCTaGAATAGCGTTTCCAGACGGACCAAACACCGCACAAAATTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SCIVPVFSGSSCLNI*NSVSRRTKHRTKLS Trigger: TGACAATTTTGTGCGGTGTTTGGTCCGTCTGGAAACGCTATTCAAGATATTCAAGCAGCTAGACCCTGAGAACACTGGAACGATACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 72 bp | AATAGCGTTTCCAGACGGACCAAACACCGCACAAAATaGTCAAAGTCGATGATTAGCTCGTCGTCTGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: NSVSRRTKHRTK*SKSMISSSSAN Trigger: GTTTGCAGACGACGAGCTAATCATCGACTTTGACAATTTTGTGCGGTGTTTGGTCCGTCTGGAAACGCTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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| CDS CAA 72 bp | AGCTGTATCGTTCCAGTGTTCTCAGGGTCTAGCTGCTaGAATATCTTGAATAGCGTTTCCAGACGGACCAAA | + |
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Preference number: 6 (lower is better) Translates to: SCIVPVFSGSSC*NILNSVSRRTK Trigger: TTTGGTCCGTCTGGAAACGCTATTCAAGATATTCAAGCAGCTAGACCCTGAGAACACTGGAACGATACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068505.10 |
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