Pregenerated sensors for CAPN12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054083Ensembl transcript IDs: ENSMUST00000066880.6
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGTCCCTCCTGATTTTCCCCTCGTGGCGGTGGGCAGAGGTCTCTaGGGACCTTCTGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: PVPPDFPLVAVGRGL*GPSEVEAGCWPACL Trigger: CAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAGAAGGTCCCCAGAGACCTCTGCCCACCGCCACGAGGGGAAAATCAGGAGGGACTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR CCA 90 bp | TCTGGGGACCTTCTGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTaGTCGTTAATGGGTTTCTCTCCACTCGCCCCCTTGAGTTTATTC | + |
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Preference number: 1 (lower is better) Translates to: SGDLLRWRQAAGLPA*SLMGFSPLAPLSLF Trigger: GAATAAACTCAAGGGGGCGAGTGGAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAGAAGGTCCCCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR GCA 90 bp | AAACATGTAATATTTTTAAGAAGGACTCTGGTGTCATCTTCTCCCTaGATCTCTGTTCATGCCCCAAGGAGCTGGCAGTGCCCACCAGCC | + |
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Preference number: 1 (lower is better) Translates to: KHVIFLRRTLVSSSP*ISVHAPRSWQCPPA Trigger: GGCTGGTGGGCACTGCCAGCTCCTTGGGGCATGAACAGAGATGCAGGGAGAAGATGACACCAGAGTCCTTCTTAAAAATATTACATGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR-3UTR TCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTAGTCGGGCAGCAGGGTaGCCTCCCTCAGCTTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: CLGWLQLVIPALVRPARVSRAAG*PPSASN Trigger: GTTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACT...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR-3UTR GCA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCCCTGTGTGGGGGTTGTaGCCCTCTCTAAGCAGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LCHLSHSHNEDIADSMPSPVWGL*PSLSRD Trigger: GTCCCTGCTTAGAGAGGGGCACAACCCCCACACAGG...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCACCAAGGAGCTGGCAGTaGCCACCAGCCCAGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: AAYLCHLSHSHNEDIADSPRSWQ*PPAQCL Trigger: CAGGCACTGGGCTGGTGGGCACTGCCAGCTCCTTGG...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR-3UTR CCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAGGGGACCTTCTGAGGTaGAGGCAGGCTGCTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: AAYLCHLSHSHNEDIADSGDLLR*RQAAGL Trigger: CAGGCCAGCAGCCTGCCTCCACCTCAGAAGGTCCCC...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR-3UTR GCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCACTGCATCTCTGTTCATaGCCCAAGGAGCTGGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: AAYLCHLSHSHNEDIADSLHLCS*PKELAV Trigger: CACTGCCAGCTCCTTGGGGCATGAACAGAGATGCAG...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCCTTCAAAAGGAAGGGTaGCAGTTCTGTTTGGGATGG | + |
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Preference number: 2 (lower is better) Translates to: LCHLSHSHNEDIADSMPSLQKEG*QFCLGW Trigger: CCATCCCAAACAGAACTGCCACCCTTCCTTTTGAAG...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCTATTTTCTTGGTTTCTaGATAAACCACCCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: LCHLSHSHNEDIADSMPSYFLGF*INHPLG Trigger: CCCCAGAGGGTGGTTTATCCAGAAACCAAGAAAATA...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR CCA 72 bp | CCTGATTTTCCCCTCGTGGCGGTGGGCAGAGGTCTCTaGGGACCTTCTGAGGTGGAGGCAGGCTGCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: PDFPLVAVGRGL*GPSEVEAGCWP Trigger: AGGCCAGCAGCCTGCCTCCACCTCAGAAGGTCCCCAGAGACCTCTGCCCACCGCCACGAGGGGAAAATCAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR CCA 72 bp | CTTCTGAGGTGGAGGCAGGCTGCTGGCCTGCCTGCCTaGTCGTTAATGGGTTTCTCTCCACTCGCCCCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LLRWRQAAGLPA*SLMGFSPLAPL Trigger: CAAGGGGGCGAGTGGAGAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR GCA 72 bp | AGAGGTCTCTGGGGACCTTCTGAGGTGGAGGCAGGCTaGTGGCCTGCCTGCCTGGTCGTTAATGGGTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: RGLWGPSEVEAG*WPACLVVNGFL Trigger: GAGAAACCCATTAACGACCAGGCAGGCAGGCCAGCAGCCTGCCTCCACCTCAGAAGGTCCCCAGAGACCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR-3UTR CAA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAGTGCCTGTGTGGGGGTaGTGCCCCTCTCTAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: AAYLCHLSHSHNEDIADSVPVWG*CPSLSR Trigger: CCTGCTTAGAGAGGGGCACAACCCCCACACAGGCAC...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR GCA 72 bp | ATATTTTTAAGAAGGACTCTGGTGTCATCTTCTCCCTaGATCTCTGTTCATGCCCCAAGGAGCTGGCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: IFLRRTLVSSSP*ISVHAPRSWQC Trigger: GCACTGCCAGCTCCTTGGGGCATGAACAGAGATGCAGGGAGAAGATGACACCAGAGTCCTTCTTAAAAATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTGACTCCCACCGGAGTTaGAGCCTCGCACCCAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVDSHRS*SLAPSG Trigger: GCCGCTGGGTGCGAGGCTTCAACTCCGGTGGGAGTC...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAAGCAAGAGCGCGCGGCTaGGCGGGGAGTCCCAGAGGT | + |
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Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKARARG*AGSPRG Trigger: ACCTCTGGGACTCCCCGCGCAGCCGCGCGCTCTTGC...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAAGCCTGGGGTAGAGTGTaGGGGAGGCAGCAGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKAWGRV*GRQQLQ Trigger: TTGCAGCTGCTGCCTCCCTCACACTCTACCCCAGGC...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAAGGCGGTTGCGCTGGATaGGTGACAACAGGACCGTGC | + |
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Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKGGCAG*VTTGPC Trigger: GCACGGTCCTGTTGTCACTCATCCAGCGCAACCGCC...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGAGCATGTCCCAGCGTaGGCAGCTGTCACTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPEHVPA*AAVTPG Trigger: CCCTGGAGTGACAGCTGCCCACGCTGGGACATGCTC...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTTCCGACCACTGTTTGTaGGTCAGGCAGACGACCCCC | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVSDHCL*VRQTTP Trigger: GGGGGTCGTCTGCCTGACCCACAAACAGTGGTCGGA...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGTGGCCTGCCATGACATaGGATGGCCCCAGAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPWPAMT*DGPRAP Trigger: AGGAGCTCTGGGGCCATCTCATGTCATGGCAGGCCA...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTGAGGGAGGCAGCAGCTaGAAGAAGCCAGCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVEGGSS*KKPAVS Trigger: GGAAACTGCTGGCTTCTTGCAGCTGCTGCCTCCCTC...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTGCCTGCAGCAGTCAGTaGCAGCCTCAGTTCACAGGA | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVACSSQ*QPQFTG Trigger: TCCTGTGAACTGAGGCTGGCACTGACTGCTGCAGGC...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCTTTAAAGAGCTGTaGGCCCCCAGCTCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPAFKEL*APSSSP Trigger: GGGACTGGAGCTGGGGGCCCACAGCTCTTTAAAGGC...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGCCACAAGGGACTCCTTaGCCAATGCGTGGCGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPPQGTP*PMRGEG Trigger: CCCTTCGCCACGCATTGGCCAAGGAGTCCCTTGTGG...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGCGCACCCAGCGGCCCTaGAAGATGTGGATATGCCAG | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPRTQRP*KMWICQ Trigger: CTGGCATATCCACATCTTCCAGGGCCGCTGGGTGCG...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTGCCGGAACTGGGGGTTaGTCCAGAAGTTTTCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVAGTGG*SRSFQR Trigger: GCGCTGAAAACTTCTGGACCAACCCCCAGTTCCGGC...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAATCTCTCCAGGGGTCCTaGTGTTGGCCCTCGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKSLQGS*CWPSQV Trigger: AACCTGCGAGGGCCAACACCAGGACCCCTGGAGAGA...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTCGGCTAGTGAGGGACTaGGTCAGCTGGTTGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVRLVRD*VSWLLR Trigger: CCTCAACAACCAGCTGACCCAGTCCCTCACTAGCCG...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTAGGTGTTGGCAGCAGTaGCGGAAGATGCAGGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVRCWQQ*RKMQVS Trigger: GCTCACCTGCATCTTCCGCCACTGCTGCCAACACCT...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTCCAAACTGCCATAGCTaGAAATGGAAGACCCCCGCG | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVPNCHS*KWKTPA Trigger: CGCGGGGGTCTTCCATTTTCAGCTATGGCAGTTTGG...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAAGCAGCCGCACCTTGGTaGAGCCCAGAGACATCTTGT | + |
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Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKAAAPW*SPETSC Trigger: ACAAGATGTCTCTGGGCTTCACCAAGGTGCGGCTGC...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGCGTCCAGGTCTGCGCTaGTCACGTCATCGATCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPRPGLR*SRHRSP Trigger: TGGAGATCGATGACGTGATCAGCGCAGACCTGGACG...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAACCAGCCCTTCATCTGTaGGGATCTCACCCCGATCAC | + |
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Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKPALHL*GSHPDH Trigger: GTGATCGGGGTGAGATCCGCACAGATGAAGGGCTGG...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGAGGGCGTCCAGGTCTaGGCTGATCACGTCATCGAT | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPEGVQV*ADHVID Trigger: ATCGATGACGTGATCAGCGCAGACCTGGACGCCCTC...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAAGTTGAGGTGGAAGCCTaGAGCAGTCAGTGCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKVEVEA*SSQCQP Trigger: AGGCTGGCACTGACTGCTGCAGGCTTCCACCTCAAC...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTTGCCATGACATGAGATaGCCCCAGAGCTCCTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVCHDMR*PQSSWK Trigger: CTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCA...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAAGTTGCGCTGGATGAGTaGCAACAGGACCGTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKVALDE*QQDRAL Trigger: AAGTGCACGGTCCTGTTGTCACTCATCCAGCGCAAC...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGCCACGCCCAAAACACTaGACAAGCTGTTCGCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPPRPKH*TSCSQV Trigger: GACCTGCGAACAGCTTGTGCAGTGTTTTGGGCGTGG...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTCAGAGCTCCTGGAAGTaGTGTAGGGACAGTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVQSSWK*CRDSLC Trigger: GCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTG...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGTGTAGGGACAGTCTTTaGCCACGCCCAAAACACTGC | + |
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Preference number: 4 (lower is better) Translates to: WQFCLGWLQLVIPALVRPCRDSL*PRPKHC Trigger: GCAGTGTTTTGGGCGTGGGCAAAGACTGTCCCTACA...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTCACCTCAGGACTCAGTaGACAAATCTGCACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: CLGWLQLVIPALVRPARVHLRTQ*TNLHCV Trigger: AACACAGTGCAGATTTGTTCACTGAGTCCTGAGGTG...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCCGGCCCTGGAAGATGTaGATATGCCAGCCGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LCHLSHSHNEDIADSMPSRPWKM*ICQPPP Trigger: TGGCGGCGGCTGGCATATCCACATCTTCCAGGGCCG...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCCCACCAGCTGGATGGTaGCCTTCCTGTTGCCACTCG | + |
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Preference number: 4 (lower is better) Translates to: LCHLSHSHNEDIADSMPSPPAGW*PSCCHS Trigger: CGAGTGGCAACAGGAAGGTCACCATCCAGCTGGTGG...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAGGCGGAAGATGCAGGTaGGCCGGGCTGCACAGCACA | + |
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Preference number: 4 (lower is better) Translates to: AAYLCHLSHSHNEDIADSGGRCR*AGLHST Trigger: TGTGCTGTGCAGCCCGGCTCACCTGCATCTTCCGCC...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAACAGGTTCCAGAGCAATaGTTATTAAGGTCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKQVPEQ*LLRSAA Trigger: AGCTGCAGACCTTAATAAGCATTGCTCTGGAACCTG...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | CACCACCTTTGTGACAGTGAGTCGGGCAGCAGGGTGACCTCCCTCAGCTTCAAATCTTCACAGATGAACTaGGGCTCAGCACAAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: HHLCDSESGSRVTSLSFKSSQMN*GSAQNS Trigger: TGAGTTTTGTGCTGAGCCCCAGTTCATCTGTGAAGA...TTTGAAGCTGAGGGAGGTCACCCTGCTGCCCGACTCACTGTCACAAAGGTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR GCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCATGGAAGATGTGGATATaGCAGCCGCCGCCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAYLCHLSHSHNEDIADSWKMWI*QPPPAG Trigger: CCCTGCTGGCGGCGGCTGGCATATCCACATCTTCCA...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| 3UTR CAA 72 bp | ATGAAGAGGCTTCAAAAGGAAGGGTGGCAGTTCTGTTaGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MKRLQKEGWQFC*GWLQLVIPALV Trigger: CACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCACCCTTCCTTTTGAAGCCTCTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCTCCATTCCACCCCTTTaGCCTTCTCTGAGTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LCHLSHSHNEDIADSMPSSIPPL*PSLSQV Trigger: GACCTGACTCAGAGAAGGCCAAAGGGGTGGAATGGA...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCTGCGTGAGAAAGTCTTaGAGCTCCATCCAGAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LCHLSHSHNEDIADSMPSCVRKS*SSIQNS Trigger: CGAGTTCTGGATGGAGCTTCAAGACTTTCTCACGCA...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR TCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAAAATGTGGCCTGCCATaGCATGAGATGGCCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AAYLCHLSHSHNEDIADSKCGLP*HEMAPE Trigger: CTCTGGGGCCATCTCATGTCATGGCAGGCCACATTT...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAGGCAAGCTCTTCGGATaGCTTCGTAGTTCTGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAYLCHLSHSHNEDIADSGKLFG*LRSSGL Trigger: AAGGCCAGAACTACGAAGCCATCCGAAGAGCTTGCC...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS-3UTR CCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAAGCTGGTTGTTGAGGTaGAAGCCTGCAGCAGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAYLCHLSHSHNEDIADSSWLLR*KPAAVS Trigger: ACTGACTGCTGCAGGCTTCCACCTCAACAACCAGCT...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCACTCGTTCCTTTGTTCTaGGCGCACGAACATCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AAYLCHLSHSHNEDIADSLVPLF*AHEHQL Trigger: AAGCTGATGTTCGTGCGCTCAGAACAAAGGAACGAG...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCATCTTGTGCGTGCCTGTaGCAGAATAAGCATGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAYLCHLSHSHNEDIADSSCACL*QNKHVP Trigger: AGGGACATGCTTATTCTGTCACAGGCACGCACAAGA...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 90 bp | AAACCGAGCGGTCGGCGCGCAGCAGTCCCGGCAAGAGCGCGCGGCTaGGCGGGGAGTCCCAGAGGTCCAGCAGCTCCTCCGGAATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KPSGRRAAVPARARG*AGSPRGPAAPPESG Trigger: TCCAGATTCCGGAGGAGCTGCTGGACCTCTGGGACTCCCCGCGCAGCCGCGCGCTCTTGCCGGGACTGCTGCGCGCCGACCGCTCGGTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 90 bp | CCGGAGTTGAAGCCTCGCACCCAGCGGCCCTGGAAGATGTGGATATaGCAGCCGCCGCCAGCAGGGCTGGGGCCCAACACCTCAGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: PELKPRTQRPWKMWI*QPPPAGLGPNTSGL Trigger: GAGTCCTGAGGTGTTGGGCCCCAGCCCTGCTGGCGGCGGCTGGCATATCCACATCTTCCAGGGCCGCTGGGTGCGAGGCTTCAACTCCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 90 bp | CTCCCACCGGAGTTGAAGCCTCGCACCCAGCGGCCCTGGAAGATGTaGATATGCCAGCCGCCGCCAGCAGGGCTGGGGCCCAACACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPPELKPRTQRPWKM*ICQPPPAGLGPNTS Trigger: TGAGGTGTTGGGCCCCAGCCCTGCTGGCGGCGGCTGGCATATCCACATCTTCCAGGGCCGCTGGGTGCGAGGCTTCAACTCCGGTGGGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS TCA 90 bp | GCTCCAGGGGCTTGTAGGGGGCCTGGAGGGCGTCCAGGTCTGCGCTaGTCACGTCATCGATCTCCACTGCGGTGTGGCTGCGCTCCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: APGACRGPGGRPGLR*SRHRSPLRCGCAPR Trigger: TCTCGGAGCGCAGCCACACCGCAGTGGAGATCGATGACGTGATCAGCGCAGACCTGGACGCCCTCCAGGCCCCCTACAAGCCCCTGGAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 90 bp | TGTTTGTGGGTCAGGCAGACGACCCCCTCGCCGCCATCCAGGTGTTaGCAGCAGTGGCGGAAGATGCAGGTGAGCCGGGCTGCACAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CLWVRQTTPSPPSRC*QQWRKMQVSRAAQH Trigger: GTGCTGTGCAGCCCGGCTCACCTGCATCTTCCGCCACTGCTGCCAACACCTGGATGGCGGCGAGGGGGTCGTCTGCCTGACCCACAAACA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS GCA 90 bp | ATCCAGGTGTTGGCAGCAGTGGCGGAAGATGCAGGTGAGCCGGGCTaGACAGCACACGAAGCGCTCGAAGTCCACACGGAGCCGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IQVLAAVAEDAGEPG*TAHEALEVHTEPAV Trigger: GACAGCCGGCTCCGTGTGGACTTCGAGCGCTTCGTGTGCTGTGCAGCCCGGCTCACCTGCATCTTCCGCCACTGCTGCCAACACCTGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS CCA 90 bp | GCAAGCTCTTCGGATGGCTTCGTAGTTCTGGCCTTTAAAGAGCTGTaGGCCCCCAGCTCCAGTCCCGGCCCCGTCGTCCACCAGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASSSDGFVVLAFKEL*APSSSPGPVVHQLD Trigger: ATCCAGCTGGTGGACGACGGGGCCGGGACTGGAGCTGGGGGCCCACAGCTCTTTAAAGGCCAGAACTACGAAGCCATCCGAAGAGCTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS TCA 90 bp | GGTTGGTCCAGAAGTTTTCAGCGCTGGGCTGACTCCCACCGGAGTTaGAGCCTCGCACCCAGCGGCCCTGGAAGATGTGGATATGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GWSRSFQRWADSHRS*SLAPSGPGRCGYAS Trigger: GCTGGCATATCCACATCTTCCAGGGCCGCTGGGTGCGAGGCTTCAACTCCGGTGGGAGTCAGCCCAGCGCTGAAAACTTCTGGACCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 90 bp | AGCGGCCCTGGAAGATGTGGATATGCCAGCCGCCGCCAGCAGGGCTaGGGCCCAACACCTCAGGACTCAGTGAACAAATCTGCACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SGPGRCGYASRRQQG*GPTPQDSVNKSALC Trigger: ACACAGTGCAGATTTGTTCACTGAGTCCTGAGGTGTTGGGCCCCAGCCCTGCTGGCGGCGGCTGGCATATCCACATCTTCCAGGGCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CAA 90 bp | TGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGGCCAGGGTTCCCACAAGGGACTCCTaGGCCAATGCGTGGCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CLGWLQLVIPALVRPARVPTRDS*ANAWRR Trigger: CCTTCGCCACGCATTGGCCAAGGAGTCCCTTGTGGG...AACCCTGGCCGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 90 bp | CCGATCACTCAGGGCAGTAGCACCCACAAGGGACTCCTTGGCCAATaGGTGGCGAAGGGCAGCAAAGACACCTGGAGTGTTTTGTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PITQGSSTHKGLLGQ*VAKGSKDTWSVLSQ Trigger: TTGAGACAAAACACTCCAGGTGTCTTTGCTGCCCTTCGCCACGCATTGGCCAAGGAGTCCCTTGTGGGTGCTACTGCCCTGAGTGATCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 90 bp | TCCTGGAAGTGGTGTAGGGACAGTCTTTGCCCACGCCCAAAACACTaGACAAGCTGTTCGCAGGTCCTAAGCCCAATCTCTCCAGGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SWKWCRDSLCPRPKH*TSCSQVLSPISPGV Trigger: GACCCCTGGAGAGATTGGGCTTAGGACCTGCGAACAGCTTGTGCAGTGTTTTGGGCGTGGGCAAAGACTGTCCCTACACCACTTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 90 bp | ATGAGATGGCCCCAGAGCTCCTGGAAGTGGTGTAGGGACAGTCTTTaGCCACGCCCAAAACACTGCACAAGCTGTTCGCAGGTCCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MRWPQSSWKWCRDSL*PRPKHCTSCSQVLS Trigger: GCTTAGGACCTGCGAACAGCTTGTGCAGTGTTTTGGGCGTGGGCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGGCCATCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 90 bp | AAGGGACTCCTTGGCCAATGCGTGGCGAAGGGCAGCAAAGACACCTaGAGTGTTTTGTCTCAAGTAGAGGACCTCACCCACGCCTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KGLLGQCVAKGSKDT*SVLSQVEDLTHASC Trigger: ACAGGAGGCGTGGGTGAGGTCCTCTACTTGAGACAAAACACTCCAGGTGTCTTTGCTGCCCTTCGCCACGCATTGGCCAAGGAGTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 90 bp | AATGTGGCCTGCCATGACATGAGATGGCCCCAGAGCTCCTGGAAGTaGTGTAGGGACAGTCTTTGCCCACGCCCAAAACACTGCACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NVACHDMRWPQSSWK*CRDSLCPRPKHCTS Trigger: GCTTGTGCAGTGTTTTGGGCGTGGGCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCAGGCCACATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CAA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGTCACGCACAGGCAGTTaGTCGTCTACCACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: WQFCLGWLQLVIPALVRPSRTGS*SSTTTS Trigger: GGATGTGGTGGTAGACGACAAACTGCCTGTGCGTGA...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 90 bp | TTGTCAAATGTGGCCTGCCATGACATGAGATGGCCCCAGAGCTCCTaGAAGTGGTGTAGGGACAGTCTTTGCCCACGCCCAAAACACTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSNVACHDMRWPQSS*KWCRDSLCPRPKHC Trigger: GCAGTGTTTTGGGCGTGGGCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCAGGCCACATTTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CAA 90 bp | TGGCAGTTCTGTTTGGGATGGCTCCAGCTCGTAATCCCAGCACTTGTGAGGCCGTTCCATTCCACCCCTTaGGCCTTCTCTGAGTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: WQFCLGWLQLVIPALVRPFHSTP*AFSESG Trigger: ACCTGACTCAGAGAAGGCCAAAGGGGTGGAATGGAA...CGGCCTCACAAGTGCTGGGATTACGAGCTGGAGCCATCCCAAACAGAACTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS TCA 90 bp | TTGGCCCTCGCAGGTTCCAGAGCAATGCTTATTAAGGTCTGCAGCTaGAGCGCGTTGAGTTCCTCCTCCTCTCCAGCCAGCTCCAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LALAGSRAMLIKVCS*SALSSSSSPASSKN Trigger: ATTTTTGGAGCTGGCTGGAGAGGAGGAGGAACTCAACGCGCTTCAGCTGCAGACCTTAATAAGCATTGCTCTGGAACCTGCGAGGGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 90 bp | GCATCTTCATCAAACTTGTCAAATGTGGCCTGCCATGACATGAGATaGCCCCAGAGCTCCTGGAAGTGGTGTAGGGACAGTCTTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: ASSSNLSNVACHDMR*PQSSWKWCRDSLCP Trigger: TGGGCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCAGGCCACATTTGACAAGTTTGATGAAGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CAA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCACGCAGCAGCCGCACCTaGGTGAAGCCCAGAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: AAYLCHLSHSHNEDIADSRSSRT*VKPRDI Trigger: GATGTCTCTGGGCTTCACCAAGGTGCGGCTGCTGCG...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS TCA 90 bp | CAGAGGCATCTTCATCAAACTTGTCAAATGTGGCCTGCCATGACATaGGATGGCCCCAGAGCTCCTGGAAGTGGTGTAGGGACAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QRHLHQTCQMWPAMT*DGPRAPGSGVGTVF Trigger: AAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCAGGCCACATTTGACAAGTTTGATGAAGATGCCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 90 bp | TTCATTGTCCCAGAGGCATCTTCATCAAACTTGTCAAATGTGGCCTaGCATGACATGAGATGGCCCCAGAGCTCCTGGAAGTGGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FIVPEASSSNLSNVA*HDMRWPQSSWKWCR Trigger: CCTACACCACTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCAGGCCACATTTGACAAGTTTGATGAAGATGCCTCTGGGACAATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CAA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCGTTCACAGGAGTTCATaGTCCCAGAGGCATCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCHLSHSHNEDIADSMPSVHRSS*SQRHLH Trigger: ATGAAGATGCCTCTGGGACAATGAACTCCTGTGAAC...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CAA 90 bp | GCTGCATATCTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAGTGCGTGAGAAAGTCTaGAAGCTCCATCCAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: AAYLCHLSHSHNEDIADSVREKV*KLHPEL Trigger: GAGTTCTGGATGGAGCTTCAAGACTTTCTCACGCAC...TGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAGATATGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS-3UTR CAA 90 bp | CTCTGCCACCTCTCTCACTCTCATAATGAAGACATAGCTGATTCAATGCCCTCCGCATCTTCATCAAACTaGTCAAATGTGGCCTGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCHLSHSHNEDIADSMPSASSSN*SNVACH Trigger: ATGGCAGGCCACATTTGACAAGTTTGATGAAGATGC...GGAGGGCATTGAATCAGCTATGTCTTCATTATGAGAGTGAGAGAGGTGGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 72 bp | GGTCGGCGCGCAGCAGTCCCGGCAAGAGCGCGCGGCTaGGCGGGGAGTCCCAGAGGTCCAGCAGCTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GRRAAVPARARG*AGSPRGPAAPP Trigger: CGGAGGAGCTGCTGGACCTCTGGGACTCCCCGCGCAGCCGCGCGCTCTTGCCGGGACTGCTGCGCGCCGACC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CAA 72 bp | CGGTTGCGCTGGATGAGTGACAACAGGACCGTGCACTaGGGGACTCGGCCTCCTCTCGCCGGGCCCCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLRWMSDNRTVH*GTRPPLAGPRA Trigger: GGCCCGGGGCCCGGCGAGAGGAGGCCGAGTCCCCAAGTGCACGGTCCTGTTGTCACTCATCCAGCGCAACCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 72 bp | ACGACCCCCTCGCCGCCATCCAGGTGTTGGCAGCAGTaGCGGAAGATGCAGGTGAGCCGGGCTGCACAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TTPSPPSRCWQQ*RKMQVSRAAQH Trigger: GTGCTGTGCAGCCCGGCTCACCTGCATCTTCCGCCACTGCTGCCAACACCTGGATGGCGGCGAGGGGGTCGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CAA 90 bp | CTGTTTGTGGGTCAGGCAGACGACCCCCTCGCCGCCATCCAGGTGTaGGCAGCAGTGGCGGAAGATGCAGGTGAGCCGGGCTGCACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LFVGQADDPLAAIQV*AAVAEDAGEPGCTA Trigger: TGCTGTGCAGCCCGGCTCACCTGCATCTTCCGCCACTGCTGCCAACACCTGGATGGCGGCGAGGGGGTCGTCTGCCTGACCCACAAACAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS TCA 72 bp | GCTTGTAGGGGGCCTGGAGGGCGTCCAGGTCTGCGCTaGTCACGTCATCGATCTCCACTGCGGTGTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACRGPGGRPGLR*SRHRSPLRCGC Trigger: GCAGCCACACCGCAGTGGAGATCGATGACGTGATCAGCGCAGACCTGGACGCCCTCCAGGCCCCCTACAAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS GCA 72 bp | TTGGCAGCAGTGGCGGAAGATGCAGGTGAGCCGGGCTaGACAGCACACGAAGCGCTCGAAGTCCACACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LAAVAEDAGEPG*TAHEALEVHTE Trigger: CTCCGTGTGGACTTCGAGCGCTTCGTGTGCTGTGCAGCCCGGCTCACCTGCATCTTCCGCCACTGCTGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 72 bp | TCGGATGGCTTCGTAGTTCTGGCCTTTAAAGAGCTGTaGGCCCCCAGCTCCAGTCCCGGCCCCGTCGTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SDGFVVLAFKEL*APSSSPGPVVH Trigger: GTGGACGACGGGGCCGGGACTGGAGCTGGGGGCCCACAGCTCTTTAAAGGCCAGAACTACGAAGCCATCCGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS TCA 72 bp | CATCCAGGTGTTGGCAGCAGTGGCGGAAGATGCAGGTaGGCCGGGCTGCACAGCACACGAAGCGCTCGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: HPGVGSSGGRCR*AGLHSTRSARS Trigger: ACTTCGAGCGCTTCGTGTGCTGTGCAGCCCGGCTCACCTGCATCTTCCGCCACTGCTGCCAACACCTGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
||
| CDS GCA 72 bp | GTCCAGGTCTGCGCTGATCACGTCATCGATCTCCACTaGGGTGTGGCTGCGCTCCGAGAAGATGCGCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: VQVCADHVIDLH*GVAALREDAQS Trigger: ACTCTGCGCATCTTCTCGGAGCGCAGCCACACCGCAGTGGAGATCGATGACGTGATCAGCGCAGACCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 72 bp | CATCAGGCTCCAGCAGTGTCAGCCGGAACTGGGGGTTaGTCCAGAAGTTTTCAGCGCTGGGCTGACTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: HQAPAVSAGTGG*SRSFQRWADSH Trigger: GTGGGAGTCAGCCCAGCGCTGAAAACTTCTGGACCAACCCCCAGTTCCGGCTGACACTGCTGGAGCCTGATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 72 bp | GTGGCCTGCCATGACATGAGATGGCCCCAGAGCTCCTaGAAGTGGTGTAGGGACAGTCTTTGCCCACGCCCA | + |
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Preference number: 6 (lower is better) Translates to: VACHDMRWPQSS*KWCRDSLCPRP Trigger: TGGGCGTGGGCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCAGGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 72 bp | CAGGGCAGTAGCACCCACAAGGGACTCCTTGGCCAATaGGTGGCGAAGGGCAGCAAAGACACCTGGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: QGSSTHKGLLGQ*VAKGSKDTWSV Trigger: AACACTCCAGGTGTCTTTGCTGCCCTTCGCCACGCATTGGCCAAGGAGTCCCTTGTGGGTGCTACTGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CAA 72 bp | CGCACGAACATCAGCTTCCCCTCACGCACAGGCAGTTaGTCGTCTACCACCACATCCACCCAGCGGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: RTNISFPSRTGS*SSTTTSTQRPN Trigger: GTTTGGCCGCTGGGTGGATGTGGTGGTAGACGACAAACTGCCTGTGCGTGAGGGGAAGCTGATGTTCGTGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS TCA 72 bp | TTCCAGCAGAGGGGCCCAGAACTCGTTCCTTTGTTCTaGGCGCACGAACATCAGCTTCCCCTCACGCACAGG | + |
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Preference number: 6 (lower is better) Translates to: FQQRGPELVPLF*AHEHQLPLTHR Trigger: CCTGTGCGTGAGGGGAAGCTGATGTTCGTGCGCTCAGAACAAAGGAACGAGTTCTGGGCCCCTCTGCTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 72 bp | GCAGTAGCACCCACAAGGGACTCCTTGGCCAATGCGTaGCGAAGGGCAGCAAAGACACCTGGAGTGTTTTGT | + |
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Preference number: 6 (lower is better) Translates to: AVAPTRDSLANA*RRAAKTPGVFC Trigger: ACAAAACACTCCAGGTGTCTTTGCTGCCCTTCGCCACGCATTGGCCAAGGAGTCCCTTGTGGGTGCTACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 72 bp | TGCCATGACATGAGATGGCCCCAGAGCTCCTGGAAGTaGTGTAGGGACAGTCTTTGCCCACGCCCAAAACAC | + |
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Preference number: 6 (lower is better) Translates to: CHDMRWPQSSWK*CRDSLCPRPKH Trigger: GTGTTTTGGGCGTGGGCAAAGACTGTCCCTACACCACTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS TCA 72 bp | GCCAGCAGGGCTGGGGCCCAACACCTCAGGACTCAGTaGACAAATCTGCACTGTGTTGAAGTGCGTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: ASRAGAQHLRTQ*TNLHCVEVREK Trigger: TTTCTCACGCACTTCAACACAGTGCAGATTTGTTCACTGAGTCCTGAGGTGTTGGGCCCCAGCCCTGCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS TCA 72 bp | GCAGGTTCCAGAGCAATGCTTATTAAGGTCTGCAGCTaGAGCGCGTTGAGTTCCTCCTCCTCTCCAGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AGSRAMLIKVCS*SALSSSSSPAS Trigger: GCTGGCTGGAGAGGAGGAGGAACTCAACGCGCTTCAGCTGCAGACCTTAATAAGCATTGCTCTGGAACCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 72 bp | CTTGGCCAATGCGTGGCGAAGGGCAGCAAAGACACCTaGAGTGTTTTGTCTCAAGTAGAGGACCTCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: LGQCVAKGSKDT*SVLSQVEDLTH Trigger: GTGGGTGAGGTCCTCTACTTGAGACAAAACACTCCAGGTGTCTTTGCTGCCCTTCGCCACGCATTGGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CAA 90 bp | GGAAGCCTGCAGCAGTCAGTGCCAGCCTCAGTTCACAGGAGTTCATaGTCCCAGAGGCATCTTCATCAAACTTGTCAAATGTGGCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GSLQQSVPASVHRSS*SQRHLHQTCQMWPA Trigger: GGCAGGCCACATTTGACAAGTTTGATGAAGATGCCTCTGGGACAATGAACTCCTGTGAACTGAGGCTGGCACTGACTGCTGCAGGCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS GCA 72 bp | CCAGAGGCATCTTCATCAAACTTGTCAAATGTGGCCTaGCATGACATGAGATGGCCCCAGAGCTCCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PEASSSNLSNVA*HDMRWPQSSWK Trigger: CTTCCAGGAGCTCTGGGGCCATCTCATGTCATGGCAGGCCACATTTGACAAGTTTGATGAAGATGCCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS TCA 72 bp | GAGCAATGCTTATTAAGGTCTGCAGCTGAAGCGCGTTaGGTTCCTCCTCCTCTCCAGCCAGCTCCAAAAATA | + |
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Preference number: 6 (lower is better) Translates to: EQCLLRSAAEAR*VPPPLQPAPKI Trigger: TATTTTTGGAGCTGGCTGGAGAGGAGGAGGAACTCAACGCGCTTCAGCTGCAGACCTTAATAAGCATTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CCA 72 bp | CACACATCTGTTCTGCTCATGTCTTCACAGATGAACTaGGGCTCAGCACAAAACTCATGGGGCCTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: HTSVLLMSSQMN*GSAQNSWGLFH Trigger: ATGGAAGAGGCCCCATGAGTTTTGTGCTGAGCCCCAGTTCATCTGTGAAGACATGAGCAGAACAGATGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CAA 72 bp | CAGGAGTTCATTGTCCCAGAGGCATCTTCATCAAACTaGTCAAATGTGGCCTGCCATGACATGAGATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: QEFIVPEASSSN*SNVACHDMRWP Trigger: GGGCCATCTCATGTCATGGCAGGCCACATTTGACAAGTTTGATGAAGATGCCTCTGGGACAATGAACTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CAA 72 bp | CAGCAGTCAGTGCCAGCCTCAGTTCACAGGAGTTCATaGTCCCAGAGGCATCTTCATCAAACTTGTCAAATG | + |
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Preference number: 6 (lower is better) Translates to: QQSVPASVHRSS*SQRHLHQTCQM Trigger: CATTTGACAAGTTTGATGAAGATGCCTCTGGGACAATGAACTCCTGTGAACTGAGGCTGGCACTGACTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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| CDS CAA 72 bp | ACAAATCTGCACTGTGTTGAAGTGCGTGAGAAAGTCTaGAAGCTCCATCCAGAACTCGCCATCCTCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: TNLHCVEVREKV*KLHPELAILLF Trigger: AAAAAGGAGGATGGCGAGTTCTGGATGGAGCTTCAAGACTTTCTCACGCACTTCAACACAGTGCAGATTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066880.6 |
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