Pregenerated sensors for CAPN11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058626Ensembl transcript IDs: ENSMUST00000120717.8, ENSMUST00000151350.2
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | TGTGTACGACGCGGCGCGGGGAGGCGATGGAATTCCTaGCAAGAGGGCGGGCTAGGAGGCGGGTGTGAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CVRRGAGRRWNS*QEGGLGGGCEL Trigger: CAACTCACACCCGCCTCCTAGCCCGCCCTCTTGTCAGGAATTCCATCGCCTCCCCGCGCCGCGTCGTACACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | GCATCCACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGGGGGCAGCCGGAGATaGCTGTTCACCTCCCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ASTILAGAGAPPAEGGTRGGSRR*LFTSLE Trigger: CTCGAGGGAGGTGAACAGCCATCTCCGGCTGCCCCC...CCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGTGGATGC 70% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GCATCCACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGCCGGGAGAGAGATCTTaGACTGGGGGTTGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASTILAGAGAPPAEGGTRPGERS*TGGCSR Trigger: TCTGGAGCAACCCCCAGTTCAAGATCTCTCTCCCGG...CCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGTGGATGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR GCA 90 bp | GCATCCACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGAACCCTCCAAAGTGCTaGCTCCAGACAGCGCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ASTILAGAGAPPAEGGTRNPPKC*LQTALR Trigger: ACGGAGCGCTGTCTGGAGGCAGCACTTTGGAGGGTT...CCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGTGGATGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | CCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGCCTCTTCCCACTCTGTaGCTTTGTCACTCCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSWPEQERHRRREERGSQPLPTL*LCHSRL Trigger: GAGCCTGGAGTGACAAAGCCACAGAGTGGGAAGAGG...CTGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR GCA 90 bp | ACGCGGCGCGGGGAGGCGATGGAATTCCTGACAAGAGGGCGGGCTAGGAGGCGGCCAAACCCTCCAAAGTaGTGCCTCCAGACAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRRGEAMEFLTRGRARRRPNPPK*CLQTAL Trigger: GAGCGCTGTCTGGAGGCAGCACTTTGGAGGGTTTGG...CCGCCTCCTAGCCCGCCCTCTTGTCAGGAATTCCATCGCCTCCCCGCGCCGCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GCATCCACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGCACTGTGTTTCTCCGTaGAGACCCGAAGCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASTILAGAGAPPAEGGTRHCVSP*RPEAGS Trigger: ACTTCCTGCTTCGGGTCTTCACGGAGAAACACAGTG...CCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGTGGATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | ACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGCCTCAGGAAACAGTTaGGGAAGCTGTCAAAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TILAGAGAPPAEGGTREPASGNS*GSCQSP Trigger: TGGACTTTGACAGCTTCCTCAACTGTTTCCTGAGGC...TGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | ACGCGGCGCGGGGAGGCGATGGAATTCCTGACAAGAGGGCGGGCTAGGAGGCGGGTTGATGAAGATCTCTaGAAAGCCGTGGTCCCGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TRRGEAMEFLTRGRARRRVDEDL*KAVVPV Trigger: TACCGGGACCACGGCTTTTCAGAGATCTTCATCAAC...CCGCCTCCTAGCCCGCCCTCTTGTCAGGAATTCCATCGCCTCCCCGCGCCGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR GCA 90 bp | CCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGCATGAAGCTCCAGCTTaGCAGAACCATCTTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWPEQERHRRREERGSQHEAPA*QNHLYP Trigger: TGGATAAAGATGGTTCTGGCAAGCTGGAGCTTCATG...CTGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR GCA 90 bp | ACGCGGCGCGGGGAGGCGATGGAATTCCTGACAAGAGGGCGGGCTAGGAGGCGGGCCTGCTTTCTCTATTaGCAGGCGCATCTCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRRGEAMEFLTRGRARRRACFLY*QAHLIG Trigger: TCCTATGAGATGCGCCTGGCAATAGAGAAAGCAGGC...CCGCCTCCTAGCCCGCCCTCTTGTCAGGAATTCCATCGCCTCCCCGCGCCGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR GCA 90 bp | ACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGTTCATCTTGATGCCTaGTTTCTCTATTGCCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TILAGAGAPPAEGGTREPVHLDA*FLYCQA Trigger: CGCCTGGCAATAGAGAAAGCAGGCATCAAGATGAAC...TGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCATCCCCCAGGATCCCTTaGCAGATGTCCGTGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VNTVPGALESESDKEHPPSPRIP*QMSVGE Trigger: CTCTCCCACGGACATCTGCCAAGGGATCCTGGGGGA...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGGCTTCGCATCTCCTCTGTTGTTCATCTTaGTGCCTGCTTTCTCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: EQERHRRREERGSQASHLLCCSS*CLLSLL Trigger: CAATAGAGAAAGCAGGCATCAAGATGAACAACAGAG...GAGATGCGAAGCCTGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | GGATCAGGGGACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGATGCCCTCATAGAAGGTaGAGTGCCAGCGGCTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSGDQSKHCAWGTGERERCPHRR*SASGSC Trigger: ACAAGAGCCGCTGGCACTCCACCTTCTATGAGGGCA...TCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTCCCCTGATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCAACAGTTCCCCCTTCCTaGGACACTCTGCTCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VNTVPGALESESDKEHPPTVPPS*DTLLEG Trigger: ACCTTCGAGCAGAGTGTCTCAGGAAGGGGGAACTGT...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCTCCAGGGCTTTCTTaGGGAGCCTTAGCATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: DQSKHCAWGTGERERQGASPGLS*GALACC Trigger: GCAACATGCTAAGGCTCCTCAAGAAAGCCCTGGAGA...TGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GGATCAGGGGACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGAAGGACCTGGAATTCATaGAGCTCCAGCTTGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSGDQSKHCAWGTGERERRTWNS*SSSLPE Trigger: TTCTGGCAAGCTGGAGCTTCATGAATTCCAGGTCCT...TCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTCCCCTGATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCACCAAACTGCCAAAGCTaGAAGTGGAAGATGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQSKHCAWGTGERERQGAPNCQS*KWKMPA Trigger: TGCTGGCATCTTCCACTTTCAGCTTTGGCAGTTTGG...TGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR GCA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCATGTCTCCAGTTCTTCTaGATCAGTGCCACCAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: VNTVPGALESESDKEHPPCLQFF*ISATRQ Trigger: CTGTCTGGTGGCACTGATGCAGAAGAACTGGAGACA...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCAATGAACTGGGGGTTATaGATGATATCCTTTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DQSKHCAWGTGERERQGAMNWGL*MISFGR Trigger: GCGGCCAAAGGATATCATTCATAACCCCCAGTTCAT...TGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCACAGCATAGTTCTTCTTaGAGCTCTGATTTCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DQSKHCAWGTGERERQGAQHSSS*SSDFWA Trigger: TGCCCAGAAATCAGAGCTTCAAGAAGAACTATGCTG...TGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR GCA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCACCCCACATGGTTATTTaGAGCCACTGGTTAATATCC | + |
|
Preference number: 4 (lower is better) Translates to: VNTVPGALESESDKEHPPPHMVI*SHWLIS Trigger: GGATATTAACCAGTGGCTGCAAATAACCATGTGGGG...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCATTTCCGTCCATTTCTTaGTCTTTTTCCACAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: VNTVPGALESESDKEHPPFPSIS*SFSTGP Trigger: AGGTCCTGTGGAAAAAGATCAAGAAATGGACGGAAA...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCACCTCATCACACTCTTTaGAGATTTCCGTCCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VNTVPGALESESDKEHPPPHHTL*RFPSIS Trigger: AGAAATGGACGGAAATCTTCAAAGAGTGTGATGAGG...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR GCA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCATTCGCCATCCTCGTTTaGCATTATCTTAAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VNTVPGALESESDKEHPPFAILV*HYLKQL Trigger: CAGCTGTTTAAGATAATGGCAAACGAGGATGGCGAA...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | GACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCAGTTCTGAAACTCCTTTaGGACCGAGAAGATGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: DQSKHCAWGTGERERQGAVLKLL*DREDDK Trigger: TTTGTCATCTTCTCGGTCCCAAAGGAGTTTCAGAAC...TGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTCATTTTTAGTCCCACGCCCTTGTCCTTaGGCCTGGAGTGGTTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: EDCLRQRKTGGESTSFLVPRPCP*AWSGLW Trigger: CCATAAACCACTCCAGGCTCAAGGACAAGGGCGTGG...GACTAAAAATGAGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | ACACTTAAGCTGAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTTTCTTCTTGAAGCTCTaGTTTCTGGGCACCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: TLKLKIAFAREKLAENPPFFLKL*FLGTTR Trigger: CCGTGTGGTGCCCAGAAATCAGAGCTTCAAGAAGAA...AGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTCAGCTTAAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCAGCATGTTATGTGTCATaGTTTCTACTTCACTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNTVPGALESESDKEHPPACYVS*FLLHYC Trigger: ACAATAGTGAAGTAGAAACCATGACACATAACATGC...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | ACACTTAAGCTGAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTAGAGAGATCTTGAACTaGGGGTTGCTCCAGAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLKLKIAFAREKLAENPPREILN*GLLQNV Trigger: GACGTTCTGGAGCAACCCCCAGTTCAAGATCTCTCT...AGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTCAGCTTAAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | ACACTTAAGCTGAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTTCCTTGAGCCTGGAGTaGTTTATGGTAGCCACCATT | + |
|
Preference number: 4 (lower is better) Translates to: TLKLKIAFAREKLAENPPSLSLE*FMVATI Trigger: AATGGTGGCTACCATAAACCACTCCAGGCTCAAGGA...AGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTCAGCTTAAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CCA 90 bp | ACACTTAAGCTGAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTGTGACAGTCTCCTCTTaGAGATGTTCAAACCGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TLKLKIAFAREKLAENPPVTVSS*RCSNRL Trigger: CAACCGGTTTGAACATCTCCAAGAGGAGACTGTCAC...AGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTCAGCTTAAGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTCATTTTTAGTCCCAAATCCTTGTCAGTaGCAGTCTCCTCTTGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EDCLRQRKTGGESTSFLVPNPCQ*QSPLGD Trigger: ATCTCCAAGAGGAGACTGTCACTGACAAGGATTTGG...GACTAAAAATGAGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR TCA 90 bp | GAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTCATTTTTAGTCCTTCACTATTGTCTGTaGCTTCAATGGAACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EDCLRQRKTGGESTSFLVLHYCL*LQWNSP Trigger: TGGGCTGTTCCATTGAAGTCACAGACAATAGTGAAG...GACTAAAAATGAGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GCATCCACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGTGTTGGCCCACGCCCTaGTCCTTGAGCCTGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASTILAGAGAPPAEGGTRCWPTP*SLSLEW Trigger: CCACTCCAGGCTCAAGGACAAGGGCGTGGGCCAACA...CCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGTGGATGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | CCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGAGGAGCCTTAGCATGTaGCCAGGGGGCTTCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSWPEQERHRRREERGSQRSLSM*PGGFWS Trigger: GCTCCAGAAGCCCCCTGGCAACATGCTAAGGCTCCT...CTGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | ACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCATGCCTGCTTTCTCTATaGCCAGGCGCATCTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: TILAGAGAPPAEGGTREPCLLSL*PGASHR Trigger: CCTATGAGATGCGCCTGGCAATAGAGAAAGCAGGCA...TGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS GCA 90 bp | CCGGGTGGTTTCTGCAGCCCCCTGCAGTGCTTCCCCTTCGCCAGCTaGCCTCATAGAAGGTGGAGTGCCAGCGGCTCTTGTAATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGFCSPLQCFPFAS*PHRRWSASGSCNPR Trigger: CCTGGGATTACAAGAGCCGCTGGCACTCCACCTTCTATGAGGGCAGCTGGCGAAGGGGAAGCACTGCAGGGGGCTGCAGAAACCACCCGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGGCTTCGCATCTCTGCATGTGTTCAGAGTaGGGGCCCAGGTTCTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: EQERHRRREERGSQASHLCMCSE*GPRFLT Trigger: TGTCAAGAACCTGGGCCCCAACTCTGAACACATGCA...GAGATGCGAAGCCTGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GGATCAGGGGACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGATCCGGGAGAGAGATCTaGAACTGGGGGTTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSGDQSKHCAWGTGERERSGREI*NWGLLQ Trigger: CTGGAGCAACCCCCAGTTCAAGATCTCTCTCCCGGA...TCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTCCCCTGATCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGGCTTCGCATCTCTTCACCTCCCTCGAGTaGATGAAGATCTCTGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQERHRRREERGSQASHLFTSLE*MKISEK Trigger: CTTTTCAGAGATCTTCATCAACTCGAGGGAGGTGAA...GAGATGCGAAGCCTGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 90 bp | GAGTCATCCTCTGGGTCATCCACTTCCGGGAGAGAGATCTTGAACTaGGGGTTGCTCCAGAACGTCTCCGGGTGGTTTCTGCAGCCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ESSSGSSTSGREILN*GLLQNVSGWFLQPP Trigger: AGGGGGCTGCAGAAACCACCCGGAGACGTTCTGGAGCAACCCCCAGTTCAAGATCTCTCTCCCGGAAGTGGATGACCCAGAGGATGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATTGGGGCCCAGGTTCTaGACACCGATAGACCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DQSKHCAWGTGERERQGALGPRF*TPIDLG Trigger: ACCCAGGTCTATCGGTGTCAAGAACCTGGGCCCCAA...TGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCAACACGGTACAGCAGTTaGGGGCAGGTGGTAAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VNTVPGALESESDKEHPPTRYSS*GQVVRE Trigger: CTCCCTTACCACCTGCCCCAAACTGCTGTACCGTGT...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | ACGCGGCGCGGGGAGGCGATGGAATTCCTGACAAGAGGGCGGGCTAGGAGGCGGATTTCCGTCCATTTCTaGATCTTTTTCCACAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TRRGEAMEFLTRGRARRRISVHF*IFFHRT Trigger: GGTCCTGTGGAAAAAGATCAAGAAATGGACGGAAAT...CCGCCTCCTAGCCCGCCCTCTTGTCAGGAATTCCATCGCCTCCCCGCGCCGCGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | ACCATCCTGGCCGGAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGTTTCTACTTCACTATaGTCTGTGACTTCAATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TILAGAGAPPAEGGTREPVSTSL*SVTSME Trigger: TTCCATTGAAGTCACAGACAATAGTGAAGTAGAAAC...TGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTCCGGCCAGGATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | ACGCGGCGCGGGGAGGCGATGGAATTCCTGACAAGAGGGCGGGCTAGGAGGCGGCTAAAGCCCTTCGTCTaGAAGTTCCTTAATTTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TRRGEAMEFLTRGRARRRLKPFV*KFLNLA Trigger: AGCTAAATTAAGGAACTTCAAGACGAAGGGCTTTAG...CCGCCTCCTAGCCCGCCCTCTTGTCAGGAATTCCATCGCCTCCCCGCGCCGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GAGCAGGAGCGCCACCGGCGGAGGGAGGAACGAGGGAGCCAGGCTTCGCATCTCATAGAACCAGTTTTCTaGGTGTCCATGGATAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EQERHRRREERGSQASHLIEPVF*VSMDKK Trigger: CTTCTTATCCATGGACACCAAGAAAACTGGTTCTAT...GAGATGCGAAGCCTGGCTCCCTCGTTCCTCCCTCCGCCGGTGGCGCTCCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 90 bp | TCTCAGAGTCATCCTCTGGGTCATCCACTTCCGGGAGAGAGATCTTaGACTGGGGGTTGCTCCAGAACGTCTCCGGGTGGTTTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQSHPLGHPLPGERS*TGGCSRTSPGGFCS Trigger: GCTGCAGAAACCACCCGGAGACGTTCTGGAGCAACCCCCAGTTCAAGATCTCTCTCCCGGAAGTGGATGACCCAGAGGATGACTCTGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 90 bp | TCCAGGGCTTTCTTGAGGAGCCTTAGCATGTTGCCAGGGGGCTTCTaGAGCGGAATGCACTGTGCTACGCCGCCTGTGAAATCTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: SRAFLRSLSMLPGGF*SGMHCATPPVKSSK Trigger: TTTGGAAGATTTCACAGGCGGCGTAGCACAGTGCATTCCGCTCCAGAAGCCCCCTGGCAACATGCTAAGGCTCCTCAAGAAAGCCCTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 90 bp | ACCGGTTGGCGTCATCCAGCAACCAGGTCTCACTGTGTTTCTCCGTaGAGACCCGAAGCAGGAAGTCAGCATCTTTATGGGGCTCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGWRHPATRSHCVSP*RPEAGSQHLYGAHR Trigger: CCTATGAGCCCCATAAAGATGCTGACTTCCTGCTTCGGGTCTTCACGGAGAAACACAGTGAGACCTGGTTGCTGGATGACGCCAACCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 90 bp | AACTCCTTTGGGACCGAGAAGATGACAAAGCCTATGGTGAGGAGCTaGGGTCCCTCTCGAGCATGTCTCCAGTTCTTCTGCATCAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: NSFGTEKMTKPMVRS*GPSRACLQFFCISA Trigger: GGCACTGATGCAGAAGAACTGGAGACATGCTCGAGAGGGACCCCAGCTCCTCACCATAGGCTTTGTCATCTTCTCGGTCCCAAAGGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GGATCAGGGGACCAGAGTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGATCCTCATCACACTCTTaGAAGATTTCCGTCCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSGDQSKHCAWGTGERERSSSHS*KISVHF Trigger: GAAATGGACGGAAATCTTCAAAGAGTGTGATGAGGA...TCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTACTCTGGTCCCCTGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS GCA 90 bp | ATGGTGAGGAGCTGGGGTCCCTCTCGAGCATGTCTCCAGTTCTTCTaGATCAGTGCCACCAGACAGGTGCAAACCATTTCGTTTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MVRSWGPSRACLQFF*ISATRQVQTISFFS Trigger: TGAGAAAAACGAAATGGTTTGCACCTGTCTGGTGGCACTGATGCAGAAGAACTGGAGACATGCTCGAGAGGGACCCCAGCTCCTCACCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 90 bp | CCGAGTACCTGGCAACGACTACCTCGGTCACTCTGTTGTTCATCTTaGTGCCTGCTTTCTCTATTGCCAGGCGCATCTCATAGGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSTWQRLPRSLCCSS*CLLSLLPGASHRSS Trigger: TGAACTCCTATGAGATGCGCCTGGCAATAGAGAAAGCAGGCATCAAGATGAACAACAGAGTGACCGAGGTAGTCGTTGCCAGGTACTCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS GCA 90 bp | CCTGGCAACGACTACCTCGGTCACTCTGTTGTTCATCTTGATGCCTaGTTTCTCTATTGCCAGGCGCATCTCATAGGAGTTCAAGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGNDYLGHSVVHLDA*FLYCQAHLIGVQVP Trigger: GGGAACTTGAACTCCTATGAGATGCGCCTGGCAATAGAGAAAGCAGGCATCAAGATGAACAACAGAGTGACCGAGGTAGTCGTTGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 90 bp | CACCAGACAGGTGCAAACCATTTCGTTTTTCTCAGAGTCATCCTCTaGGTCATCCACTTCCGGGAGAGAGATCTTGAACTGGGGGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HQTGANHFVFLRVIL*VIHFRERDLELGVA Trigger: AGCAACCCCCAGTTCAAGATCTCTCTCCCGGAAGTGGATGACCCAGAGGATGACTCTGAGAAAAACGAAATGGTTTGCACCTGTCTGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 90 bp | GATGCCAGCATAGTTCTTCTTGAAGCTCTGATTTCCAGGATCCCTTaGCAGATGTCCGTGGGAGAGAAGTCATTCGTGATGAACTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: DASIVLLEALISRIP*QMSVGEKSFVMNWG Trigger: CCCCCAGTTCATCACGAATGACTTCTCTCCCACGGACATCTGCCAAGGGATCCTGGAAATCAGAGCTTCAAGAAGAACTATGCTGGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151350.2 |
||
| CDS-3UTR CAA 90 bp | ACACTTAAGCTGAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTACGAATACCAGCTTGTaGTTCCTAGTGGGCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TLKLKIAFAREKLAENPPTNTSL*FLVGSR Trigger: CCGGCTGCCCACTAGGAACAACAAGCTGGTATTCGT...AGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTCAGCTTAAGTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | GTAAACACTGTGCCTGGGGCACTGGAGAGCGAGAGCGACAAGGAGCATCCACCAATCCTGTTGAGAAGTTaGTGTAGTGCATACATATCC | + |
|
Preference number: 5 (lower is better) Translates to: VNTVPGALESESDKEHPPILLRS*CSAYIS Trigger: GGATATGTATGCACTACACAAACTTCTCAACAGGAT...TGGTGGATGCTCCTTGTCGCTCTCGCTCTCCAGTGCCCCAGGCACAGTGTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 90 bp | CAAACTGCCAAAGCTGAAAGTGGAAGATGCCAGCATAGTTCTTCTTaGAGCTCTGATTTCTGGGCACCACACGGTACAGCAGTTTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTAKAESGRCQHSSS*SSDFWAPHGTAVWG Trigger: GCCCCAAACTGCTGTACCGTGTGGTGCCCAGAAATCAGAGCTTCAAGAAGAACTATGCTGGCATCTTCCACTTTCAGCTTTGGCAGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 90 bp | CAGCCGGAGATGGCTGTTCACCTCCCTCGAGTTGATGAAGATCTCTaGAAAGCCGTGGTCCCGGTATTTCAAGAAGAAGTCTTTCTTAAG | + |
|
Preference number: 5 (lower is better) Translates to: QPEMAVHLPRVDEDL*KAVVPVFQEEVFLK Trigger: CTTAAGAAAGACTTCTTCTTGAAATACCGGGACCACGGCTTTTCAGAGATCTTCATCAACTCGAGGGAGGTGAACAGCCATCTCCGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | ACACTTAAGCTGAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTACCTCGGTCACTCTGTaGTTCATCTTGATGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLKLKIAFAREKLAENPPTSVTL*FILMPA Trigger: AGCAGGCATCAAGATGAACAACAGAGTGACCGAGGT...AGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTCAGCTTAAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 90 bp | CCACCATTCCTTTTTCAGCCCAAGAGATGTCCATCCATGCTCCTGTaGGGAACTCTTCACATGCAGATAAGGCCAATAAACCCATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPFLFQPKRCPSMLL*GTLHMQIRPINPSA Trigger: AGCTGATGGGTTTATTGGCCTTATCTGCATGTGAAGAGTTCCTCACAGGAGCATGGATGGACATCTCTTGGGCTGAAAAAGGAATGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151350.2 |
||
| CDS CCA 90 bp | AGAGAAGTCATTCGTGATGAACTGGGGGTTATGAATGATATCCTTTaGCCGCTGCCAGTAGATATTCTGCATGTGTTCAGAGTTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: REVIRDELGVMNDIL*PLPVDILHVFRVGA Trigger: GGCCCCAACTCTGAACACATGCAGAATATCTACTGGCAGCGGCCAAAGGATATCATTCATAACCCCCAGTTCATCACGAATGACTTCTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000120717.8 ENSMUST00000151350.2 |
||
| CDS CCA 90 bp | TGGCTGTTCACCTCCCTCGAGTTGATGAAGATCTCTGAAAAGCCGTaGTCCCGGTATTTCAAGAAGAAGTCTTTCTTAAGGTGGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: WLFTSLELMKISEKP*SRYFKKKSFLRWMS Trigger: GGACATCCACCTTAAGAAAGACTTCTTCTTGAAATACCGGGACCACGGCTTTTCAGAGATCTTCATCAACTCGAGGGAGGTGAACAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS-3UTR CAA 90 bp | ACACTTAAGCTGAAGATTGCCTTCGCCAGAGAAAAACTGGCGGAGAATCCACCTACTCTGTTGTTCATCTaGATGCCTGCTTTCTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: TLKLKIAFAREKLAENPPTLLFI*MPAFSI Trigger: AATAGAGAAAGCAGGCATCAAGATGAACAACAGAGT...AGGTGGATTCTCCGCCAGTTTTTCTCTGGCGAAGGCAATCTTCAGCTTAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS GCA 72 bp | AGCAGGGCGCTCCAGAAATCCTGGCGATGGGAGGCGTaGACGAATACCAGCTTGTTGTTCCTAGTGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SRALQKSWRWEA*TNTSLLFLVGS Trigger: GCTGCCCACTAGGAACAACAAGCTGGTATTCGTGCACGCCTCCCATCGCCAGGATTTCTGGAGCGCCCTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | AAATCCTGGCGATGGGAGGCGTGCACGAATACCAGCTaGTTGTTCCTAGTGGGCAGCCGGTCGTCCACGACC | + |
|
Preference number: 6 (lower is better) Translates to: KSWRWEACTNTS*LFLVGSRSSTT Trigger: GGTCGTGGACGACCGGCTGCCCACTAGGAACAACAAGCTGGTATTCGTGCACGCCTCCCATCGCCAGGATTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 72 bp | CATCCTCTGGGTCATCCACTTCCGGGAGAGAGATCTTaGACTGGGGGTTGCTCCAGAACGTCTCCGGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HPLGHPLPGERS*TGGCSRTSPGG Trigger: ACCACCCGGAGACGTTCTGGAGCAACCCCCAGTTCAAGATCTCTCTCCCGGAAGTGGATGACCCAGAGGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | GGGGGCAGCCGGAGATGGCTGTTCACCTCCCTCGAGTaGATGAAGATCTCTGAAAAGCCGTGGTCCCGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GGSRRWLFTSLE*MKISEKPWSRY Trigger: ATACCGGGACCACGGCTTTTCAGAGATCTTCATCAACTCGAGGGAGGTGAACAGCCATCTCCGGCTGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 72 bp | GCTTCTGGAGCGGAATGCACTGTGCTACGCCGCCTGTaGAATCTTCCAAACCCTCCAAAGTGCTGCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: ASGAECTVLRRL*NLPNPPKCCLQ Trigger: CTGGAGGCAGCACTTTGGAGGGTTTGGAAGATTTCACAGGCGGCGTAGCACAGTGCATTCCGCTCCAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 72 bp | GGGACCGAGAAGATGACAAAGCCTATGGTGAGGAGCTaGGGTCCCTCTCGAGCATGTCTCCAGTTCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GTEKMTKPMVRS*GPSRACLQFFC Trigger: GCAGAAGAACTGGAGACATGCTCGAGAGGGACCCCAGCTCCTCACCATAGGCTTTGTCATCTTCTCGGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 72 bp | GGGATAATGACGTATTCCCCCGGGGGCAGCCGGAGATaGCTGTTCACCTCCCTCGAGTTGATGAAGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GIMTYSPGGSRR*LFTSLELMKIS Trigger: AGAGATCTTCATCAACTCGAGGGAGGTGAACAGCCATCTCCGGCTGCCCCCGGGGGAATACGTCATTATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | GACTTCTCCAGGGCTTTCTTGAGGAGCCTTAGCATGTaGCCAGGGGGCTTCTGGAGCGGAATGCACTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DFSRAFLRSLSM*PGGFWSGMHCA Trigger: AGCACAGTGCATTCCGCTCCAGAAGCCCCCTGGCAACATGCTAAGGCTCCTCAAGAAAGCCCTGGAGAAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | CGAACATCTGGGCTCACCTCTTCCCACTCTGTGGCTTaGTCACTCCAGGCTCCATTCCATTCAACCCGACCC | + |
|
Preference number: 6 (lower is better) Translates to: RTSGLTSSHSVA*SLQAPFHSTRP Trigger: GGGTCGGGTTGAATGGAATGGAGCCTGGAGTGACAAAGCCACAGAGTGGGAAGAGGTGAGCCCAGATGTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 90 bp | TTCTCAGAGTCATCCTCTGGGTCATCCACTTCCGGGAGAGAGATCTaGAACTGGGGGTTGCTCCAGAACGTCTCCGGGTGGTTTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSESSSGSSTSGREI*NWGLLQNVSGWFLQ Trigger: CTGCAGAAACCACCCGGAGACGTTCTGGAGCAACCCCCAGTTCAAGATCTCTCTCCCGGAAGTGGATGACCCAGAGGATGACTCTGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS GCA 72 bp | AGCTGGGGTCCCTCTCGAGCATGTCTCCAGTTCTTCTaGATCAGTGCCACCAGACAGGTGCAAACCATTTCG | + |
|
Preference number: 6 (lower is better) Translates to: SWGPSRACLQFF*ISATRQVQTIS Trigger: CGAAATGGTTTGCACCTGTCTGGTGGCACTGATGCAGAAGAACTGGAGACATGCTCGAGAGGGACCCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 90 bp | AGCTGTACCCGAACATCTGGGCTCACCTCTTCCCACTCTGTGGCTTaGTCACTCCAGGCTCCATTCCATTCAACCCGACCCCAAGGATTT | + |
|
Preference number: 6 (lower is better) Translates to: SCTRTSGLTSSHSVA*SLQAPFHSTRPQGF Trigger: AAATCCTTGGGGTCGGGTTGAATGGAATGGAGCCTGGAGTGACAAAGCCACAGAGTGGGAAGAGGTGAGCCCAGATGTTCGGGTACAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 72 bp | TGGTGTTGGCCCACGCCCTTGTCCTTGAGCCTGGAGTaGTTTATGGTAGCCACCATTCCTTTTTCAGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: WCWPTPLSLSLE*FMVATIPFSAQ Trigger: TTGGGCTGAAAAAGGAATGGTGGCTACCATAAACCACTCCAGGCTCAAGGACAAGGGCGTGGGCCAACACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120717.8 ENSMUST00000151350.2 |
||
| CDS TCA 72 bp | CGTCATCCAGCAACCAGGTCTCACTGTGTTTCTCCGTaGAGACCCGAAGCAGGAAGTCAGCATCTTTATGGG | + |
|
Preference number: 6 (lower is better) Translates to: RHPATRSHCVSP*RPEAGSQHLYG Trigger: CCCATAAAGATGCTGACTTCCTGCTTCGGGTCTTCACGGAGAAACACAGTGAGACCTGGTTGCTGGATGACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | AGCTCCAGCTTGCCAGAACCATCTTTATCCAGGAGGTaGATCATCCGGCGACAGACTTCCAAGCTAAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLPEPSLSRR*IIRRQTSKLKP Trigger: GGGCTTTAGCTTGGAAGTCTGTCGCCGGATGATCAACCTCCTGGATAAAGATGGTTCTGGCAAGCTGGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | TCAGTGACAGTCTCCTCTTGGAGATGTTCAAACCGGTaGGCGTCATCCAGCAACCAGGTCTCACTGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVTVSSWRCSNR*ASSSNQVSLCF Trigger: GAAACACAGTGAGACCTGGTTGCTGGATGACGCCAACCGGTTTGAACATCTCCAAGAGGAGACTGTCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | CTGGCAACGACTACCTCGGTCACTCTGTTGTTCATCTaGATGCCTGCTTTCTCTATTGCCAGGCGCATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LATTTSVTLLFI*MPAFSIARRIS Trigger: TGAGATGCGCCTGGCAATAGAGAAAGCAGGCATCAAGATGAACAACAGAGTGACCGAGGTAGTCGTTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | TCCGAGTACCTGGCAACGACTACCTCGGTCACTCTGTaGTTCATCTTGATGCCTGCTTTCTCTATTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SEYLATTTSVTL*FILMPAFSIAR Trigger: CCTGGCAATAGAGAAAGCAGGCATCAAGATGAACAACAGAGTGACCGAGGTAGTCGTTGCCAGGTACTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 72 bp | TGGCAACGACTACCTCGGTCACTCTGTTGTTCATCTTaGTGCCTGCTTTCTCTATTGCCAGGCGCATCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: WQRLPRSLCCSS*CLLSLLPGASH Trigger: ATGAGATGCGCCTGGCAATAGAGAAAGCAGGCATCAAGATGAACAACAGAGTGACCGAGGTAGTCGTTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 72 bp | TCCTTGTCCAAATCCTTGTCAGTGACAGTCTCCTCTTaGAGATGTTCAAACCGGTTGGCGTCATCCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: SLSKSLSVTVSS*RCSNRLASSSN Trigger: GTTGCTGGATGACGCCAACCGGTTTGAACATCTCCAAGAGGAGACTGTCACTGACAAGGATTTGGACAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 90 bp | ATCATGTTATCCGAGTACCTGGCAACGACTACCTCGGTCACTCTGTaGTTCATCTTGATGCCTGCTTTCTCTATTGCCAGGCGCATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: IMLSEYLATTTSVTL*FILMPAFSIARRIS Trigger: TGAGATGCGCCTGGCAATAGAGAAAGCAGGCATCAAGATGAACAACAGAGTGACCGAGGTAGTCGTTGCCAGGTACTCGGATAACATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 72 bp | ATGGCTGTTCACCTCCCTCGAGTTGATGAAGATCTCTaGAAAGCCGTGGTCCCGGTATTTCAAGAAGAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: MAVHLPRVDEDL*KAVVPVFQEEV Trigger: GACTTCTTCTTGAAATACCGGGACCACGGCTTTTCAGAGATCTTCATCAACTCGAGGGAGGTGAACAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 72 bp | TATTGCCAGGCGCATCTCATAGGAGTTCAAGTTCCCTaGGCGGTCCTCATCACACTCTTTGAAGATTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: YCQAHLIGVQVP*AVLITLFEDFR Trigger: ACGGAAATCTTCAAAGAGTGTGATGAGGACCGCTCAGGGAACTTGAACTCCTATGAGATGCGCCTGGCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS GCA 72 bp | GACTACCTCGGTCACTCTGTTGTTCATCTTGATGCCTaGTTTCTCTATTGCCAGGCGCATCTCATAGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: DYLGHSVVHLDA*FLYCQAHLIGV Trigger: AACTCCTATGAGATGCGCCTGGCAATAGAGAAAGCAGGCATCAAGATGAACAACAGAGTGACCGAGGTAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | GTCCTCATAGTTCTGATTCTTATAGTTGTAGGCATTTaGGTGTTGGCCCACGCCCTTGTCCTTGAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLIVLILIVVGI*VLAHALVLEPG Trigger: TCCAGGCTCAAGGACAAGGGCGTGGGCCAACACCAAAATGCCTACAACTATAAGAATCAGAACTATGAGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120717.8 ENSMUST00000151350.2 |
||
| CDS CAA 72 bp | ATCCTTGTCCAAATCCTTGTCAGTGACAGTCTCCTCTaGGAGATGTTCAAACCGGTTGGCGTCATCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ILVQILVSDSLL*EMFKPVGVIQQ Trigger: TTGCTGGATGACGCCAACCGGTTTGAACATCTCCAAGAGGAGACTGTCACTGACAAGGATTTGGACAAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 90 bp | AAGGTCCTCATAGTTCTGATTCTTATAGTTGTAGGCATTTTGGTGTaGGCCCACGCCCTTGTCCTTGAGCCTGGAGTGGTTTATGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: KVLIVLILIVVGILV*AHALVLEPGVVYGS Trigger: GCTACCATAAACCACTCCAGGCTCAAGGACAAGGGCGTGGGCCAACACCAAAATGCCTACAACTATAAGAATCAGAACTATGAGGACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120717.8 ENSMUST00000151350.2 |
||
| CDS CAA 90 bp | TGCTCGAAGGTCCTCATAGTTCTGATTCTTATAGTTGTAGGCATTTaGGTGTTGGCCCACGCCCTTGTCCTTGAGCCTGGAGTGGTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: CSKVLIVLILIVVGI*VLAHALVLEPGVVY Trigger: ATAAACCACTCCAGGCTCAAGGACAAGGGCGTGGGCCAACACCAAAATGCCTACAACTATAAGAATCAGAACTATGAGGACCTTCGAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120717.8 ENSMUST00000151350.2 |
||
| CDS CAA 90 bp | TGTCCTCGCACCAGCATGTTATGTGTCATGGTTTCTACTTCACTATaGTCTGTGACTTCAATGGAACAGCCCATGAGGGAAGACTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CPRTSMLCVMVSTSL*SVTSMEQPMREDFS Trigger: GGAGAAGTCTTCCCTCATGGGCTGTTCCATTGAAGTCACAGACAATAGTGAAGTAGAAACCATGACACATAACATGCTGGTGCGAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | ATAGTTCTGATTCTTATAGTTGTAGGCATTTTGGTGTaGGCCCACGCCCTTGTCCTTGAGCCTGGAGTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: IVLILIVVGILV*AHALVLEPGVV Trigger: AACCACTCCAGGCTCAAGGACAAGGGCGTGGGCCAACACCAAAATGCCTACAACTATAAGAATCAGAACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120717.8 ENSMUST00000151350.2 |
||
| CDS TCA 72 bp | CTTTTTCAGCCCAAGAGATGTCCATCCATGCTCCTGTaGGGAACTCTTCACATGCAGATAAGGCCAATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LFQPKRCPSMLL*GTLHMQIRPIN Trigger: GTTTATTGGCCTTATCTGCATGTGAAGAGTTCCTCACAGGAGCATGGATGGACATCTCTTGGGCTGAAAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151350.2 |
||
| CDS TCA 72 bp | AAAGCTGAAAGTGGAAGATGCCAGCATAGTTCTTCTTaGAGCTCTGATTTCCAGGATCCCTTGGCAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: KAESGRCQHSSS*SSDFQDPLADV Trigger: GACATCTGCCAAGGGATCCTGGAAATCAGAGCTTCAAGAAGAACTATGCTGGCATCTTCCACTTTCAGCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151350.2 |
||
| CDS CCA 72 bp | ACCTCCCTCGAGTTGATGAAGATCTCTGAAAAGCCGTaGTCCCGGTATTTCAAGAAGAAGTCTTTCTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSLELMKISEKP*SRYFKKKSFLR Trigger: CCTTAAGAAAGACTTCTTCTTGAAATACCGGGACCACGGCTTTTCAGAGATCTTCATCAACTCGAGGGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CCA 72 bp | ATTCGTGATGAACTGGGGGTTATGAATGATATCCTTTaGCCGCTGCCAGTAGATATTCTGCATGTGTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: IRDELGVMNDIL*PLPVDILHVFR Trigger: TCTGAACACATGCAGAATATCTACTGGCAGCGGCCAAAGGATATCATTCATAACCCCCAGTTCATCACGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000120717.8 ENSMUST00000151350.2 |
||
| CDS CAA 90 bp | CTAAAGCCCTTCGTCTTGAAGTTCCTTAATTTAGCTGTCATCCTGTaGAGAAGTTTGTGTAGTGCATACATATCCACTTCGCCATCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LKPFVLKFLNLAVIL*RSLCSAYISTSPSS Trigger: CGAGGATGGCGAAGTGGATATGTATGCACTACACAAACTTCTCAACAGGATGACAGCTAAATTAAGGAACTTCAAGACGAAGGGCTTTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS TCA 72 bp | ACTTCGCCATCCTCGTTTGCCATTATCTTAAACAGCTaGAGAGAATCCTTGTCCAAATCCTTGTCAGTGACA | + |
|
Preference number: 6 (lower is better) Translates to: TSPSSFAIILNS*RESLSKSLSVT Trigger: TGTCACTGACAAGGATTTGGACAAGGATTCTCTTCAGCTGTTTAAGATAATGGCAAACGAGGATGGCGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | ACCAGCATGTTATGTGTCATGGTTTCTACTTCACTATaGTCTGTGACTTCAATGGAACAGCCCATGAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TSMLCVMVSTSL*SVTSMEQPMRE Trigger: TTCCCTCATGGGCTGTTCCATTGAAGTCACAGACAATAGTGAAGTAGAAACCATGACACATAACATGCTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | CACTGGTTAATATCCAAGCAAATAGAACCAGTTTTCTaGGTGTCCATGGATAAGAAGAACGCAAACATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HWLISKQIEPVF*VSMDKKNANMA Trigger: GGCCATGTTTGCGTTCTTCTTATCCATGGACACCAAGAAAACTGGTTCTATTTGCTTGGATATTAACCAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||
| CDS CAA 72 bp | TTCGTCTTGAAGTTCCTTAATTTAGCTGTCATCCTGTaGAGAAGTTTGTGTAGTGCATACATATCCACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: FVLKFLNLAVIL*RSLCSAYISTS Trigger: CGAAGTGGATATGTATGCACTACACAAACTTCTCAACAGGATGACAGCTAAATTAAGGAACTTCAAGACGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120717.8 |
||