Pregenerated sensors for CAPN10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026270Ensembl transcript IDs: ENSMUST00000027488.11, ENSMUST00000117814.8, ENSMUST00000152983.8, ENSMUST00000187342.2
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCACAGTCTCCCACTCGCCTGCAGGCAGGGCTGTTCCAGGCGATaGACCCTTGGTGGCCAGCCTGACGGCACTGAGGGAGATTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: LHSLPLACRQGCSRR*TLGGQPDGTEGDFP Trigger: GGGAAAATCTCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCCCTGCCTGCAGGCGAGTGGGAGACTGTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| 3UTR CCA 90 bp | GGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTaGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: GPQPTSRADEKLACS*LEMHLDAGHRGSSH Trigger: GTGGCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR GCA 90 bp | CAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGCTGGAGATaGACCTGGATGCTGGGCACAGGGGCAGCAGCCACTCTGGCCATG | + |
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Preference number: 1 (lower is better) Translates to: QPPELTRSWLVAGWR*TWMLGTGAAATLAM Trigger: CATGGCCAGAGTGGCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR CCA 90 bp | CACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGCTaGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCCACTCTG | + |
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Preference number: 1 (lower is better) Translates to: HSQPPELTRSWLVAG*RCTWMLGTGAAATL Trigger: CAGAGTGGCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR CCA 90 bp | GCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCCACTCTaGCCATGGCTGGCACACAGGGTCTCGTGTCAGGCTTTCATCACT | + |
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Preference number: 1 (lower is better) Translates to: AGDAPGCWAQGQQPL*PWLAHRVSCQAFIT Trigger: AGTGATGAAAGCCTGACACGAGACCCTGTGTGCCAGCCATGGCCAGAGTGGCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR CCA 90 bp | TTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTaGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGG | + |
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Preference number: 1 (lower is better) Translates to: FSPKVHSQPPELTRS*LVAGWRCTWMLGTG Trigger: CCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR CCA 90 bp | GAGGGAGATTTTCCCAGTGGAGAAGACTCTGAGCAGGAACTGCCCTaGCACATCCTTCAAAAAGGTGCTAGGGACGGCCAGGTAGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: EGDFPSGEDSEQELP*HILQKGARDGQVVA Trigger: GGCTACTACCTGGCCGTCCCTAGCACCTTTTTGAAGGATGTGCCAGGGCAGTTCCTGCTCAGAGTCTTCTCCACTGGGAAAATCTCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| 3UTR TCA 90 bp | GGCTGTGGATGGACTGCCTATCGATTCTGGTTGCTATGGTTACCGTaGAGGTACCCTCTGTATCTGGCAGGTAGGTGGAGGGAACAATCC | + |
|
Preference number: 1 (lower is better) Translates to: GCGWTAYRFWLLWLP*RYPLYLAGRWREQS Trigger: GGATTGTTCCCTCCACCTACCTGCCAGATACAGAGGGTACCTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTCCATCCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR CCA 90 bp | ATCGATTCTGGTTGCTATGGTTACCGTGAAGGTACCCTCTGTATCTaGCAGGTAGGTGGAGGGAACAATCCTGTAGTTCCCCACAGAAAG | + |
|
Preference number: 1 (lower is better) Translates to: IDSGCYGYREGTLCI*QVGGGNNPVVPHRK Trigger: CTTTCTGTGGGGAACTACAGGATTGTTCCCTCCACCTACCTGCCAGATACAGAGGGTACCTTCACGGTAACCATAGCAACCAGAATCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR CCA 90 bp | TATCAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTaGGGCACGGGTGATGATGTGGCTAGCTTGGATGCTGTTCTTGCT | + |
|
Preference number: 1 (lower is better) Translates to: YQEDKNGFGLCLVSN*GTGDDVASLDAVLA Trigger: AGCAAGAACAGCATCCAAGCTAGCCACATCATCACCCGTGCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
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| 3UTR CAA 90 bp | GTCTCCCACTCGCCTGCAGGCAGGGCTGTTCCAGGCGATGCACCCTaGGTGGCCAGCCTGACGGCACTGAGGGAGATTTTCCCAGTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSHSPAGRAVPGDAP*VASLTALREIFPVE Trigger: CTCCACTGGGAAAATCTCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCCCTGCCTGCAGGCGAGTGGGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| 3UTR-3UTR CCA 90 bp | GCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCGGCTGGAGATGCACCTaGATGCTGGGCACAGGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: APYFSPKVHSQPPELTRSGWRCT*MLGTGA Trigger: TGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCC...GCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCATGGCTTGTAGCTGGCTaGAGATGCACCTGGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAWLVAG*RCTWML Trigger: CAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCA...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR-3UTR TCA 90 bp | CGATGCACCCTTGGTGGCCAGCCTGACGGCACTGAGGGAGATTTTCCCAGTGGACAGGTAGTAGCCTGGTaGGAGCTCACAACGCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: RCTLGGQPDGTEGDFPSGQVVAW*ELTTQV Trigger: CACTTGCGTTGTGAGCTCTCACCAGGCTACTACCTG...TCCACTGGGAAAATCTCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACTGCACAGTCTCCCACTCGCCTGCAGGCAGGGCTGTTCCAGGCGATGCACACTCTGAGCAGGAACTaGCCTGGCACATCCTTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: ATAQSPTRLQAGLFQAMHTLSRN*PGTSFK Trigger: TTTGAAGGATGTGCCAGGGCAGTTCCTGCTCAGAGT...GTGCATCGCCTGGAACAGCCCTGCCTGCAGGCGAGTGGGAGACTGTGCAGTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAAGCTGGCTTGTAGCTaGCTGGAGATGCACCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: KLACSWLEMHLDAGHRGSKLACS*LEMHLD Trigger: ATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR-3UTR CCA 90 bp | TACCGTGAAGGTACCCTCTGTATCTGGCAGGTAGGTGGAGGGAACAATCCTGTAGGGCAGCAGCCACTCTaGCCATGGCTGGCACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: YREGTLCIWQVGGGNNPVGQQPL*PWLAHR Trigger: CCTGTGTGCCAGCCATGGCCAGAGTGGCTGCTGCCC...TACAGGATTGTTCCCTCCACCTACCTGCCAGATACAGAGGGTACCTTCACGGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCCCCAGGAATCTCCTaGCCTTCACTAAGGAATGAA | + |
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Preference number: 2 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAAPGIS*PSLRNE Trigger: TTCATTCCTTAGTGAAGGCCAGGAGATTCCTGGGGC...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCATCTCCTGGCTGTaGATGGACTGCCTATCGATT | + |
|
Preference number: 2 (lower is better) Translates to: KLACSWLEMHLDAGHRGSSISWL*MDCLSI Trigger: AATCGATAGGCAGTCCATCCACAGCCAGGAGATGCT...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGGCCCCAGGAATCTCCTaGCCTTCACTAAGGAATGAA | + |
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Preference number: 2 (lower is better) Translates to: PQGPQPTSRADEKLACSWAPGIS*PSLRNE Trigger: TTCATTCCTTAGTGAAGGCCAGGAGATTCCTGGGGC...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCATGGCTGGCACACAGGGTCTCGTGTCAGGCTTTCATCACTGCCATAAATGGCCCAGCATCTCCTaGCTGTGGATGGACTGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LAMAGTQGLVSGFHHCHKWPSIS*LWMDCL Trigger: TAGGCAGTCCATCCACAGCCAGGAGATGCTGGGCCA...TTTATGGCAGTGATGAAAGCCTGACACGAGACCCTGTGTGCCAGCCATGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR-3UTR CCA 90 bp | CCATGGCTGGCACACAGGGTCTCGTGTCAGGCTTTCATCACTGCCATAAAGGAGTGGCTTGTAGCTGGCTaGAGATGCACCTGGATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PWLAHRVSCQAFITAIKEWLVAG*RCTWML Trigger: CAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCA...CTCCTTTATGGCAGTGATGAAAGCCTGACACGAGACCCTGTGTGCCAGCCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCTGTGGATGGACTGCCTATCGATTCTGGTTGCTATGGTTACCGTGAAGGAGCTGACGAGAAGCTaGCTTGTAGCTGGCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SWLWMDCLSILVAMVTVKELTRS*LVAGWR Trigger: TCTCCAGCCAGCTACAAGCCAGCTTCTCGTCAGCTC...CTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTCCATCCACAGCCAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR-3UTR TCA 90 bp | AATCAGAAAAGGCTGCACACATTCAGGGAAAAACTCAAGAAGTACACTAGAAGGGAGCAGCAGGGGACATaGCGTAGGTCCCGCCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: NQKRLHTFREKLKKYTRREQQGT*RRSRLA Trigger: GGCAAGGCGGGACCTACGTCATGTCCCCTGCTGCTC...CCTTCTAGTGTACTTCTTGAGTTTTTCCCTGAATGTGTGCAGCCTTTTCTGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
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| 3UTR GCA 72 bp | CTCCCACTCGCCTGCAGGCAGGGCTGTTCCAGGCGATaGACCCTTGGTGGCCAGCCTGACGGCACTGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: LPLACRQGCSRR*TLGGQPDGTEG Trigger: TCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCCCTGCCTGCAGGCGAGTGGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| 3UTR CCA 72 bp | GCTGGGCACAGGGGCAGCAGCCACTCTGGCCATGGCTaGCACACAGGGTCTCGTGTCAGGCTTTCATCACTG | + |
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Preference number: 3 (lower is better) Translates to: AGHRGSSHSGHG*HTGSRVRLSSL Trigger: CAGTGATGAAAGCCTGACACGAGACCCTGTGTGCCAGCCATGGCCAGAGTGGCTGCTGCCCCTGTGCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR CCA 72 bp | CCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGCTaGAGATGCACCTGGATGCTGGGCACAGGGGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PPELTRSWLVAG*RCTWMLGTGAA Trigger: TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR CCA 72 bp | CCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTaGCTGGAGATGCACCTGGATGCTGGGCACAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: PTSRADEKLACS*LEMHLDAGHRG Trigger: GCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR CCA 72 bp | AAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTaGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: KVHSQPPELTRS*LVAGWRCTWML Trigger: CAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR TCA 72 bp | TTGCTACTGCTTCTAAGCTGTGAGCAGCAGGGGACATaGCGTAGGTCCCGCCTTGCCCTACGTGAAAGGACT | + |
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Preference number: 3 (lower is better) Translates to: LLLLLSCEQQGT*RRSRLALRERT Trigger: AGTCCTTTCACGTAGGGCAAGGCGGGACCTACGTCATGTCCCCTGCTGCTCACAGCTTAGAAGCAGTAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
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| 3UTR CCA 72 bp | TTTCCCAGTGGAGAAGACTCTGAGCAGGAACTGCCCTaGCACATCCTTCAAAAAGGTGCTAGGGACGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: FPSGEDSEQELP*HILQKGARDGQ Trigger: CTGGCCGTCCCTAGCACCTTTTTGAAGGATGTGCCAGGGCAGTTCCTGCTCAGAGTCTTCTCCACTGGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| 3UTR TCA 72 bp | TGGACTGCCTATCGATTCTGGTTGCTATGGTTACCGTaGAGGTACCCTCTGTATCTGGCAGGTAGGTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: WTAYRFWLLWLP*RYPLYLAGRWR Trigger: CCTCCACCTACCTGCCAGATACAGAGGGTACCTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR GCA 72 bp | CTCCTGGCTGTGGATGGACTGCCTATCGATTCTGGTTaGTATGGTTACCGTGAAGGTACCCTCTGTATCTGG | + |
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Preference number: 3 (lower is better) Translates to: LLAVDGLPIDSG*YGYREGTLCIW Trigger: CCAGATACAGAGGGTACCTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTCCATCCACAGCCAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| 3UTR GCA 72 bp | GTAAGGCTTCCGAAGTCAAGAAGGTTATGTGGATTCTaGAAAGCTTTCCACAACAAACCCGGGCCCCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: VRLPKSRRLCGF*KAFHNKPGPQE Trigger: TTCCTGGGGCCCGGGTTTGTTGTGGAAAGCTTTGCAGAATCCACATAACCTTCTTGACTTCGGAAGCCTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| 3UTR CCA 72 bp | GATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTaGGGCACGGGTGATGATGTGGCTAGCTTGGATGCT | + |
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Preference number: 3 (lower is better) Translates to: DKNGFGLCLVSN*GTGDDVASLDA Trigger: AGCATCCAAGCTAGCCACATCATCACCCGTGCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
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| 3UTR-3UTR CAA 90 bp | CAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCACGGGTGCTTGGATGCTGTTCTaGCTACTGCTTCTAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: QEDKNGFGLCLVSNWGTGAWMLF*LLLLSC Trigger: ACAGCTTAGAAGCAGTAGCAAGAACAGCATCCAAGC...ACCCGTGCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
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| CDS-3UTR GCA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCTGGGAGGTTCACCGGTaGAGGACTGGCACCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LACSWLEMHLDAGHRGSSWEVHR*RTGTRQ Trigger: CTGGCGGGTGCCAGTCCTGCACCGGTGAACCTCCCA...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS-3UTR GCA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCGCCAGCCACAGGGGGTaGAGACAGGACTCTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LACSWLEMHLDAGHRGSSASHRG*RQDSGQ Trigger: CTGCCCAGAGTCCTGTCTGCACCCCCTGTGGCTGGC...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS-3UTR GCA 90 bp | GCAGCCCTGCAACTGCACAGTCTCCCACTCGCCTGCAGGCAGGGCTGTTCCAGGACGCATGGCATGCAGTaGCAGCCACAGGGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: AALQLHSLPLACRQGCSRTHGMQ*QPQGVQ Trigger: CTGCACCCCCTGTGGCTGGCACTGCATGCCATGCGT...CCTGGAACAGCCCTGCCTGCAGGCGAGTGGGAGACTGTGCAGTTGCAGGGCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| CDS-3UTR TCA 90 bp | CTCGCCTGCAGGCAGGGCTGTTCCAGGCGATGCACCCTTGGTGGCCAGCCTGACGGCCAGTCTGACTCCTaGGCTCCTGCAGATCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LACRQGCSRRCTLGGQPDGQSDS*APADLR Trigger: TCTCAGATCTGCAGGAGCTCAGGAGTCAGACTGGCC...GTCAGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCCCTGCCTGCAGGCGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| CDS-3UTR GCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCATGGGAGGTTCACCGGTaGAGGACTGGCACCCGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAWEVHR*RTGTRQ Trigger: CTGGCGGGTGCCAGTCCTGCACCGGTGAACCTCCCA...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS-3UTR GCA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCGGCTGTTCCAGGCGATaGACCCTTGGTGGCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LACSWLEMHLDAGHRGSSGCSRR*TLGGQP Trigger: AGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCC...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
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| CDS-3UTR CCA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCCCAATGGGGTGCAGCTaGCTGTCACTGAGCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LACSWLEMHLDAGHRGSSPMGCS*LSLSRQ Trigger: CTGCCGGCTCAGTGACAGCCAGCTGCACCCCATTGG...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
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| 3UTR CAA 72 bp | TCGCCTGCAGGCAGGGCTGTTCCAGGCGATGCACCCTaGGTGGCCAGCCTGACGGCACTGAGGGAGATTTTC | + |
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Preference number: 4 (lower is better) Translates to: SPAGRAVPGDAP*VASLTALREIF Trigger: GAAAATCTCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCCCTGCCTGCAGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGGGCTGTTCCAGGCGATGCACCCTTGGTGGCCAGCCTGACGGCACTGAGATACCCTGGCCAGTCTaGCTCCTGAGCTCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RQGCSRRCTLGGQPDGTEIPWPV*LLSSCR Trigger: TCTGCAGGAGCTCAGGAGTCAGACTGGCCAGGGTAT...CTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCCCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
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| CDS-3UTR GCA 90 bp | GATGCACCCTTGGTGGCCAGCCTGACGGCACTGAGGGAGATTTTCCCAGTGGAGTCTCTCCAGAGGCCCTaGCAACAACGCCGGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: DAPLVASLTALREIFPVESLQRP*QQRRPQ Trigger: CTGGGGCCGGCGTTGTTGGCAGGGCCTCTGGAGAGA...CTCCACTGGGAAAATCTCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGATGCACCCTTGGTGGCCAGCCTGACGGCACTGAGGGAGATTTTCCCAGTTGGGAGGTTCACCGGTaGAGGACTGGCACCCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRCTLGGQPDGTEGDFPSWEVHR*RTGTRQ Trigger: CTGGCGGGTGCCAGTCCTGCACCGGTGAACCTCCCA...ACTGGGAAAATCTCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGATGCACCCTTGGTGGCCAGCCTGACGGCACTGAGGGAGATTTTCCCAGTGCCAGCCACAGGGGGTaGAGACAGGACTCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRCTLGGQPDGTEGDFPSASHRG*RQDSGQ Trigger: CTGCCCAGAGTCCTGTCTGCACCCCCTGTGGCTGGC...ACTGGGAAAATCTCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGTCTCCCACTCGCCTaGAGGCAGGGCTGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KLACSWLEMHLDAGHRGSSLPLA*RQGCSR Trigger: CCTGGAACAGCCCTGCCTGCAGGCGAGTGGGAGACT...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR GCA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCAGGCAAAGTTCCTGCTaGCCCCAGCTGTCTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LACSWLEMHLDAGHRGSSRQSSC*PQLSGQ Trigger: CTGGCCAGACAGCTGGGGGCAGCAGGAACTTTGCCT...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCCTGGTCAGACCAGCCTaGCTGTCCTGGAGGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LACSWLEMHLDAGHRGSSLVRPA*LSWRED Trigger: GTCTTCCCTCCAGGACAGCCAGGCTGGTCTGACCAG...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CCACTCGCCTGCAGGCAGGGCTGTTCCAGGCGATGCACCCTTGGTGGCCAGCCTCTCAGACTCCTTAGCTaGCTCTACCTGGTTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PLACRQGCSRRCTLGGQPLRLLS*LYLVPP Trigger: GGGTGGAACCAGGTAGAGCCAGCTAAGGAGTCTGAG...AGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCCCTGCCTGCAGGCGAGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCGGCCAGTCTGACTCCTaGGCTCCTGCAGATCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LACSWLEMHLDAGHRGSSGQSDS*APADLR Trigger: TCTCAGATCTGCAGGAGCTCAGGAGTCAGACTGGCC...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | GCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCGTCCGAGGCGGGGAATaGCGCGTCCCGGAAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: APYFSPKVHSQPPELTRSVRGGE*RVPEEL Trigger: GAGCTCTTCCGGGACGCGGCATTCCCCGCCTCGGAC...GCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCCTGCCCCCAGCTGTCTaGCCAGCTCTCCAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: APYFSPKVHSQPPELTRSLPPAV*PALQQP Trigger: GGGCTGCTGGAGAGCTGGCCAGACAGCTGGGGGCAG...GCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR TCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGGCCAGTCTGACTCCTaGGCTCCTGCAGATCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAGQSDS*APADLR Trigger: TCTCAGATCTGCAGGAGCTCAGGAGTCAGACTGGCC...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGGCTGTTCCAGGCGATGCACCCTTGGTGGCCAGCCTGACGGCACTGAGCCTCATCAAACTCCCTaGGGAACTCCTCTTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RQGCSRRCTLGGQPDGTEPHQTP*GTPLPR Trigger: TCGAGGAAGAGGAGTTCCTCAGGGAGTTTGATGAGG...CTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCGCCTGGAACAGCCCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
||
| CDS-3UTR GCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCGTCCGAGGCGGGGAATaGCGCGTCCCGGAAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSVRGGE*RVPEEL Trigger: GAGCTCTTCCGGGACGCGGCATTCCCCGCCTCGGAC...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAAGGCATCTGCCACTTaGCCTGCCCACAGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KLACSWLEMHLDAGHRGSKASAT*PAHRCS Trigger: TGAGCACCTGTGGGCAGGGCAAGTGGCAGATGCCTT...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGCCACTGGGTCTGTCCTaGTGGCCGCTGGCTTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWPLGLS*WPLAFV Trigger: AACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGG...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | GCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTCTCTCCAGAGGCCCTaGCAACAACGCCGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: APYFSPKVHSQPPELTRSSLQRP*QQRRPQ Trigger: CTGGGGCCGGCGTTGTTGGCAGGGCCTCTGGAGAGA...GCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGCAGCAGCCCTGCAACTaGACAGTCTCCCACTCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWQQPCN*TVSHSP Trigger: AGGCGAGTGGGAGACTGTGCAGTTGCAGGGCTGCTG...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCATGGCCCAGCATCTCCTaGCTGTGGATGGACTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAWPSIS*LWMDCL Trigger: TAGGCAGTCCATCCACAGCCAGGAGATGCTGGGCCA...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR TCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGATACCCTGGCCAGTCTaGCTCCTGAGCTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWIPWPV*LLSSCR Trigger: TCTGCAGGAGCTCAGGAGTCAGACTGGCCAGGGTAT...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCCAGGTAGTAGCCTGGTaGGAGCTCACAACGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLACSWLEMHLDAGHRGSQVVAW*ELTTQV Trigger: CACTTGCGTTGTGAGCTCTCACCAGGCTACTACCTG...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGAAGGCATCTGCCACTTaGCCTGCCCACAGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWKASAT*PAHRCS Trigger: TGAGCACCTGTGGGCAGGGCAAGTGGCAGATGCCTT...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGTCTCTCCAGAGGCCCTaGCAACAACGCCGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DKAPYFSPKVHSQPPELTSLQRP*QQRRPQ Trigger: CTGGGGCCGGCGTTGTTGGCAGGGCCTCTGGAGAGA...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCACACCGGTCCTTCAGGTaGAGTAGCTGCCGACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAHRSFR*SSCRQV Trigger: AACTTGTCGGCAGCTACTCCACCTGAAGGACCGGTG...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCCAAGCTCCACCTTTCTaGCAGGCTTCCAGTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: KLACSWLEMHLDAGHRGSQAPPF*QASSEI Trigger: GATCTCACTGGAAGCCTGGCAGAAAGGTGGAGCTTG...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGGCCAGCCACAGGGGGTaGAGACAGGACTCTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPEASHRG*RQDSGQ Trigger: CTGCCCAGAGTCCTGTCTGCACCCCCTGTGGCTGGC...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCACGCATGGCATGCAGTaGCAGCCACAGGGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSTHGMQ*QPQGVQ Trigger: CTGCACCCCCTGTGGCTGGCACTGCATGCCATGCGT...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAAGGGAGGCAGGGATTaGAGGGGTAAGAGGCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KLACSWLEMHLDAGHRGSKGGRD*RGKRQS Trigger: ACTTTGCCTCTTACCCCTGCAATCCCTGCCTCCCTT...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCACTGGGCCAGAGGCGTaGACAAGTTGTAAAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLACSWLEMHLDAGHRGSTGPEA*TSCKRA Trigger: CGCTCTTTTACAACTTGTCCACGCCTCTGGCCCAGT...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCGAGATGATGAAGGCATaGAACTCTCCGAGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LACSWLEMHLDAGHRGSSEMMKA*NSPSSL Trigger: CAGGGAACTCGGAGAGTTCCATGCCTTCATCATCTC...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGCTCAGACTCCTTAGCTaGCTCTACCTGGTTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWLRLLS*LYLVPP Trigger: GGGTGGAACCAGGTAGAGCCAGCTAAGGAGTCTGAG...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGATAAAGGAGACCTCCTaGAGCAGCTGGCCCAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWIKETS*SSWPSI Trigger: GATGCTGGGCCAGCTGCTCCAGGAGGTCTCCTTTAT...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR TCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGAGCTCCTGCAGATCTaGGATGATGAAGGCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAELLQI*DDEGME Trigger: TTCCATGCCTTCATCATCTCAGATCTGCAGGAGCTC...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCGAGCTCCTGCAGATCTaGGATGATGAAGGCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLACSWLEMHLDAGHRGSELLQI*DDEGME Trigger: TTCCATGCCTTCATCATCTCAGATCTGCAGGAGCTC...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCGCCTCCGGGGTCTCTaGAGAACAGCCACACACACC | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPERLRGL*RTATHT Trigger: GGTGTGTGTGGCTGTTCTTCAGAGACCCCGGAGGCG...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | GCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCCAGTGGAGAAGACTCTaGGCAGGAACTGCCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: APYFSPKVHSQPPELTRSQWRRL*AGTALA Trigger: TGCCAGGGCAGTTCCTGCTCAGAGTCTTCTCCACTG...GCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | GCAACTGGGGCACGGGTGATGATGTGGCTAGCTTGGATGCTGTTCTTGCTACTGCCACTGGGTCTGTCCTaGTGGCCGCTGGCTTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATGARVMMWLAWMLFLLLPLGLS*WPLAFV Trigger: AACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGG...CAGTAGCAAGAACAGCATCCAAGCTAGCCACATCATCACCCGTGCCCCAGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCCCACTGGGTCTGTCCTaGTGGCCGCTGGCTTTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSPLGLS*WPLAFV Trigger: AACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGG...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAACTCTGAGCAGGAACTaGCCTGGCACATCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SWLVAGWRCTWMLGTGAATLSRN*PGTSFK Trigger: TTTGAAGGATGTGCCAGGGCAGTTCCTGCTCAGAGT...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | GCAACTGGGGCACGGGTGATGATGTGGCTAGCTTGGATGCTGTTCTTGCTACTGCTGGTCAGACCAGCCTaGCTGTCCTGGAGGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ATGARVMMWLAWMLFLLLLVRPA*LSWRED Trigger: GTCTTCCCTCCAGGACAGCCAGGCTGGTCTGACCAG...CAGTAGCAAGAACAGCATCCAAGCTAGCCACATCATCACCCGTGCCCCAGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCAGACGATCATCTATaGTCACTTCCTCCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAADDHL*SLPPSV Trigger: GACACTGGGAGGAAGTGACCATAGATGATCGTCTGC...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGTCACGATCATACGCATaGCATGCAGTGCCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWSRSYA*HAVPAT Trigger: TGTGGCTGGCACTGCATGCCATGCGTATGATCGTGA...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCCTTAGCAGTGGCTCCTaGAGCAGCAGGGAACACGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSLSSGS*SSREHA Trigger: CGCGTGTTCCCTGCTGCTCCAGGAGCCACTGCTAAG...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR TCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCCAGTGGAGAAGACTCTaGGCAGGAACTGCCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSQWRRL*AGTALA Trigger: TGCCAGGGCAGTTCCTGCTCAGAGTCTTCTCCACTG...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCCCGTCTGCTGGAACCTaGGGGAGATTTTCCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSPSAGT*GRFSQW Trigger: CCACTGGGAAAATCTCCCTCAGGTTCCAGCAGACGG...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCACGGGTGTCCGAGGCGGGGAATaGCGCGTCCCGGAAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEDKNGFGLCLVSNWGTGVRGGE*RVPEEL Trigger: GAGCTCTTCCGGGACGCGGCATTCCCCGCCTCGGAC...ACCCGTGCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAAGAGGCAAAGTTCCTaGTGCCCCCAGCTGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DKAPYFSPKVHSQPPELTKRQSS*CPQLSG Trigger: GCCAGACAGCTGGGGGCAGCAGGAACTTTGCCTCTT...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGAAGCCTTGGTATTTCTaGTCAGACCAGCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWKPWYF*SDQPGC Trigger: ACAGCCAGGCTGGTCTGACCAGAAATACCAAGGCTT...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGCTGGGTCTGTCCTGCTaGCCGCTGGCTTTCGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: DKAPYFSPKVHSQPPELTLGLSC*PLAFVT Trigger: TGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAG...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CGATGCACCCTTGGTGGCCAGCCTGACGGCACTGAGGGAGATTTTCCCAGTGGAGAGATGATGAAGGCATaGAACTCTCCGAGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCTLGGQPDGTEGDFPSGEMMKA*NSPSSL Trigger: CAGGGAACTCGGAGAGTTCCATGCCTTCATCATCTC...TCCACTGGGAAAATCTCCCTCAGTGCCGTCAGGCTGGCCACCAAGGGTGCATCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
||
| CDS-3UTR GCA 90 bp | ACTGGGGCACGGGTGATGATGTGGCTAGCTTGGATGCTGTTCTTGCTACTGCTTAAGGCATCTGCCACTTaGCCTGCCCACAGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGARVMMWLAWMLFLLLLKASAT*PAHRCS Trigger: TGAGCACCTGTGGGCAGGGCAAGTGGCAGATGCCTT...AAGCAGTAGCAAGAACAGCATCCAAGCTAGCCACATCATCACCCGTGCCCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | TACCGTGAAGGTACCCTCTGTATCTGGCAGGTAGGTGGAGGGAACAATCCTGTACTGGTCAGACCAGCCTaGCTGTCCTGGAGGGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YREGTLCIWQVGGGNNPVLVRPA*LSWRED Trigger: GTCTTCCCTCCAGGACAGCCAGGCTGGTCTGACCAG...TACAGGATTGTTCCCTCCACCTACCTGCCAGATACAGAGGGTACCTTCACGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGGGTCTGTCCTGCTaGCCGCTGGCTTTCGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPELGLSC*PLAFVT Trigger: TGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAG...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCCTCAGACTCCTTAGCTaGCTCTACCTGGTTCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSLRLLS*LYLVPP Trigger: GGGTGGAACCAGGTAGAGCCAGCTAAGGAGTCTGAG...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGCCACTCTGGCCATGGCTGGCACACAGGGTCTCGTGTCAGGCTTTCATCAGAGCAGGAACTGCCCTaGCACATCCTTCAAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSHSGHGWHTGSRVRLSSEQELP*HILQKG Trigger: ACCTTTTTGAAGGATGTGCCAGGGCAGTTCCTGCTC...TGATGAAAGCCTGACACGAGACCCTGTGTGCCAGCCATGGCCAGAGTGGCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTGGCTTGTAGCTGGGTTCTCACCGTCTGCTaGAACCTGAAAGACATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQGPQPTSRADEKLACSWVLTVC*NLKDME Trigger: TTCCATGTCTTTCAGGTTCCAGCAGACGGTGAGAAC...CCAGCTACAAGCCAGCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGGGTACCCTCTGTATCTaGCAGGTAGGTGGAGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DKAPYFSPKVHSQPPELTGTLCI*QVGGGN Trigger: GTTCCCTCCACCTACCTGCCAGATACAGAGGGTACC...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR TCA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGCCTCATCAAACTCCCTaGGGAACTCCTCTTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DKAPYFSPKVHSQPPELTPHQTP*GTPLPR Trigger: TCGAGGAAGAGGAGTTCCTCAGGGAGTTTGATGAGG...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCAGGTAGTAGCCTGGTaGGAGCTCACAACGCAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPEQVVAW*ELTTQV Trigger: CACTTGCGTTGTGAGCTCTCACCAGGCTACTACCTG...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | GCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCTCCCAGTGTCCAAACTaGCAAATCCGACAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: APYFSPKVHSQPPELTRSSQCPN*QIRQVK Trigger: CTTCACCTGTCGGATTTGGCAGTTTGGACACTGGGA...GCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGATCTGCCACTTGCCCTaGCCACAGGTGCTCATACGA | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPEICHLP*PQVLIR Trigger: TCGTATGAGCACCTGTGGGCAGGGCAAGTGGCAGAT...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | CCATGGCTGGCACACAGGGTCTCGTGTCAGGCTTTCATCACTGCCATAAAGGAGCAAGCTCCACCTTTCTaGCAGGCTTCCAGTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PWLAHRVSCQAFITAIKEQAPPF*QASSEI Trigger: GATCTCACTGGAAGCCTGGCAGAAAGGTGGAGCTTG...CTCCTTTATGGCAGTGATGAAAGCCTGACACGAGACCCTGTGTGCCAGCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGGAAACAGCTGAGGTGTaGCACAGATTTCCTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: DKAPYFSPKVHSQPPELTETAEV*HRFPGV Trigger: GACCCCAGGAAATCTGTGCCACACCTCAGCTGTTTC...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | GCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAGAAGCGAGCAGGAACTGCCCTaGCACATCCTTCAAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: APYFSPKVHSQPPELTRSEQELP*HILQKG Trigger: ACCTTTTTGAAGGATGTGCCAGGGCAGTTCCTGCTC...GCTTCTCGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCCTCATCAAACTCCCTaGGGAACTCCTCTTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPEPHQTP*GTPLPR Trigger: TCGAGGAAGAGGAGTTCCTCAGGGAGTTTGATGAGG...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | TACCGTGAAGGTACCCTCTGTATCTGGCAGGTAGGTGGAGGGAACAATCCTGTAATCTGCCACTTGCCCTaGCCACAGGTGCTCATACGA | + |
|
Preference number: 4 (lower is better) Translates to: YREGTLCIWQVGGGNNPVICHLP*PQVLIR Trigger: TCGTATGAGCACCTGTGGGCAGGGCAAGTGGCAGAT...TACAGGATTGTTCCCTCCACCTACCTGCCAGATACAGAGGGTACCTTCACGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGAAGCCTTGGTATTTCTaGTCAGACCAGCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKAPYFSPKVHSQPPELTKPWYF*SDQPGC Trigger: ACAGCCAGGCTGGTCTGACCAGAAATACCAAGGCTT...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CCATGGCTGGCACACAGGGTCTCGTGTCAGGCTTTCATCACTGCCATAAAGGAGAACACATCCTCTCTCTaGCACCGGGAAAAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PWLAHRVSCQAFITAIKENTSSL*HREKQS Trigger: ACTCTGCTTTTCCCGGTGCCAGAGAGAGGATGTGTT...CTCCTTTATGGCAGTGATGAAAGCCTGACACGAGACCCTGTGTGCCAGCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCGTTCTCACCGTCTGCTaGAACCTGAGGGAGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSVLTVC*NLREIF Trigger: GAAAATCTCCCTCAGGTTCCAGCAGACGGTGAGAAC...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTTATCTGGAAACAGCTaGGGTGTGGCACAGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SRTKHPILAPRSTANLQSLSGNS*GVAQIS Trigger: GGAAATCTGTGCCACACCTCAGCTGTTTCCAGATAA...GCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCCATGGCTGGCACACAGGGTCTCGTGTCAGGCTTTCATCACTGCCATAAATTATCTGGAAACAGCTaGGGTGTGGCACAGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAMAGTQGLVSGFHHCHKLSGNS*GVAQIS Trigger: GGAAATCTGTGCCACACCTCAGCTGTTTCCAGATAA...TTTATGGCAGTGATGAAAGCCTGACACGAGACCCTGTGTGCCAGCCATGGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR TCA 90 bp | GACTGCCTATCGATTCTGGTTGCTATGGTTACCGTGAAGGTACCCTCTGTATCTATACCCTGGCCAGTCTaGCTCCTGAGCTCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DCLSILVAMVTVKVPSVSIPWPV*LLSSCR Trigger: TCTGCAGGAGCTCAGGAGTCAGACTGGCCAGGGTAT...AGATACAGAGGGTACCTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGACCAGAACTTGGGGTTaGAGGGAAAGCAACTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKAPYFSPKVHSQPPELTTRTWG*RESNCC Trigger: ACAACAGTTGCTTTCCCTGCAACCCCAAGTTCTGGT...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGACTCTGAGCAGGAACTaGCCTGGCACATCCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPETLSRN*PGTSFK Trigger: TTTGAAGGATGTGCCAGGGCAGTTCCTGCTCAGAGT...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGCTGTGGATGGACTGCCTATCGATTCTGGTTGCTATGGTTACCGTGAAGACTGGGCCAGAGGCGTaGACAAGTTGTAAAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SWLWMDCLSILVAMVTVKTGPEA*TSCKRA Trigger: CGCTCTTTTACAACTTGTCCACGCCTCTGGCCCAGT...CTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTCCATCCACAGCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | CTAGCTTGGATGCTGTTCTTGCTACTGCTTCTAAGCTGTGAGCAGCAGGGGACAGAAACAGCTGAGGTGTaGCACAGATTTCCTGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAWMLFLLLLLSCEQQGTETAEV*HRFPGV Trigger: GACCCCAGGAAATCTGTGCCACACCTCAGCTGTTTC...TGTCCCCTGCTGCTCACAGCTTAGAAGCAGTAGCAAGAACAGCATCCAAGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGAACACATCCTCTCTCTaGCACCGGGAAAAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPENTSSL*HREKQS Trigger: ACTCTGCTTTTCCCGGTGCCAGAGAGAGGATGTGTT...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGGGCACGGGTGATGATGTGGCTAGCTTGGATGCTGTTCTTGCTACTGCTTAACACATCCTCTCTCTaGCACCGGGAAAAGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGARVMMWLAWMLFLLLLNTSSL*HREKQS Trigger: ACTCTGCTTTTCCCGGTGCCAGAGAGAGGATGTGTT...AAGCAGTAGCAAGAACAGCATCCAAGCTAGCCACATCATCACCCGTGCCCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGGAGATGATGAAGGCATaGAACTCTCCGAGTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPEEMMKA*NSPSSL Trigger: CAGGGAACTCGGAGAGTTCCATGCCTTCATCATCTC...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCTTGGATGCTGTTCTTGCTACTGCTTCTAAGCTGTGAGCAGCAGGGGACATCCCAGTGTCCAAACTaGCAAATCCGACAGGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAWMLFLLLLLSCEQQGTSQCPN*QIRQVK Trigger: CTTCACCTGTCGGATTTGGCAGTTTGGACACTGGGA...TGTCCCCTGCTGCTCACAGCTTAGAAGCAGTAGCAAGAACAGCATCCAAGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | TACCGTGAAGGTACCCTCTGTATCTGGCAGGTAGGTGGAGGGAACAATCCTGTAGCAGACGATCATCTATaGTCACTTCCTCCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YREGTLCIWQVGGGNNPVADDHL*SLPPSV Trigger: GACACTGGGAGGAAGTGACCATAGATGATCGTCTGC...TACAGGATTGTTCCCTCCACCTACCTGCCAGATACAGAGGGTACCTTCACGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTATCGATTCTGGTTGCTATGGTTACCGTGAAGGTACCCTCTGTATCTCACCGGTCCTTCAGGTaGAGTAGCTGCCGACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DCLSILVAMVTVKVPSVSHRSFR*SSCRQV Trigger: AACTTGTCGGCAGCTACTCCACCTGAAGGACCGGTG...AGATACAGAGGGTACCTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGTATCTGGCAGGTAGGTaGAGGGAACAATCCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IQDKAPYFSPKVHSQPPEYLAGR*REQSCS Trigger: ACTACAGGATTGTTCCCTCCACCTACCTGCCAGATA...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027488.11 |
||
| CDS-3UTR TCA 90 bp | CTAGCTTGGATGCTGTTCTTGCTACTGCTTCTAAGCTGTGAGCAGCAGGGGACATTATCTGGAAACAGCTaGGGTGTGGCACAGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAWMLFLLLLLSCEQQGTLSGNS*GVAQIS Trigger: GGAAATCTGTGCCACACCTCAGCTGTTTCCAGATAA...TGTCCCCTGCTGCTCACAGCTTAGAAGCAGTAGCAAGAACAGCATCCAAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTATCGATTCTGGTTGCTATGGTTACCGTGAAGGTACCCTCTGTATCTTCACGATCATACGCATaGCATGCAGTGCCAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DCLSILVAMVTVKVPSVSSRSYA*HAVPAT Trigger: TGTGGCTGGCACTGCATGCCATGCGTATGATCGTGA...AGATACAGAGGGTACCTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTATCGATTCTGGTTGCTATGGTTACCGTGAAGGTACCCTCTGTATCTACCAGAACTTGGGGTTaGAGGGAAAGCAACTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: DCLSILVAMVTVKVPSVSTRTWG*RESNCC Trigger: ACAACAGTTGCTTTCCCTGCAACCCCAAGTTCTGGT...AGATACAGAGGGTACCTTCACGGTAACCATAGCAACCAGAATCGATAGGCAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CCA 90 bp | ATATATCAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCCTGGGTCTGTCCTGCTaGCCGCTGGCTTTCGTTACA | + |
|
Preference number: 4 (lower is better) Translates to: IYQEDKNGFGLCLVSNWGLGLSC*PLAFVT Trigger: TGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAG...GCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR GCA 90 bp | ATATATCAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCATCTGCCACTTGCCCTaGCCACAGGTGCTCATACGA | + |
|
Preference number: 4 (lower is better) Translates to: IYQEDKNGFGLCLVSNWGICHLP*PQVLIR Trigger: TCGTATGAGCACCTGTGGGCAGGGCAAGTGGCAGAT...GCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | ATATATCAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCCACCGGTCCTTCAGGTaGAGTAGCTGCCGACAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IYQEDKNGFGLCLVSNWGHRSFR*SSCRQV Trigger: AACTTGTCGGCAGCTACTCCACCTGAAGGACCGGTG...GCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR GCA 90 bp | AATCAGAAAAGGCTGCACACATTCAGGGAAAAACTCAAGAAGTACACTAGAAGGCAAGCTCCACCTTTCTaGCAGGCTTCCAGTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: NQKRLHTFREKLKKYTRRQAPPF*QASSEI Trigger: GATCTCACTGGAAGCCTGGCAGAAAGGTGGAGCTTG...CCTTCTAGTGTACTTCTTGAGTTTTTCCCTGAATGTGTGCAGCCTTTTCTGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | ATATATCAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCACTGGGCCAGAGGCGTaGACAAGTTGTAAAAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: IYQEDKNGFGLCLVSNWGTGPEA*TSCKRA Trigger: CGCTCTTTTACAACTTGTCCACGCCTCTGGCCCAGT...GCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | ATATATCAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCAAGCCTTGGTATTTCTaGTCAGACCAGCCTGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IYQEDKNGFGLCLVSNWGKPWYF*SDQPGC Trigger: ACAGCCAGGCTGGTCTGACCAGAAATACCAAGGCTT...GCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS-3UTR CCA 90 bp | ATATATCAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCGCAGACGATCATCTATaGTCACTTCCTCCCAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYQEDKNGFGLCLVSNWGADDHL*SLPPSV Trigger: GACACTGGGAGGAAGTGACCATAGATGATCGTCTGC...GCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| 3UTR CAA 72 bp | ATATATCAGGAAGATAAAAATGGCTTTGGACTTTGCTaGGTAAGCAACTGGGGCACGGGTGATGATGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IYQEDKNGFGLC*VSNWGTGDDVA Trigger: AGCCACATCATCACCCGTGCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS GCA 90 bp | AGGCGTGGACAAGTTGTAAAAGAGCGAGGAGTCCGAGGCGGGGAATaGCGCGTCCCGGAAGAGCTCCCGCGCCGGCGTCTCGGCCCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRGQVVKERGVRGGE*RVPEELPRRRLGPD Trigger: GTCCGGGCCGAGACGCCGGCGCGGGAGCTCTTCCGGGACGCGGCATTCCCCGCCTCGGACTCCTCGCTCTTTTACAACTTGTCCACGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | CCACAGCCTGGTAGTCTTTGCCTGGGAGGTTCACCGGTGCAGGACTaGCACCCGCCAGTGCCCGAGTCTGGCCCACTAAGCGCCTCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: PQPGSLCLGGSPVQD*HPPVPESGPLSASG Trigger: CCCGGAGGCGCTTAGTGGGCCAGACTCGGGCACTGGCGGGTGCCAGTCCTGCACCGGTGAACCTCCCAGGCAAAGACTACCAGGCTGTGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 ENSMUST00000187342.2 |
||
| CDS CCA 90 bp | CTCTACCTTCCAGATGTGCAGGCCCACAGCCTGGTAGTCTTTGCCTaGGAGGTTCACCGGTGCAGGACTGGCACCCGCCAGTGCCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LYLPDVQAHSLVVFA*EVHRCRTGTRQCPS Trigger: ACTCGGGCACTGGCGGGTGCCAGTCCTGCACCGGTGAACCTCCCAGGCAAAGACTACCAGGCTGTGGGCCTGCACATCTGGAAGGTAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 ENSMUST00000187342.2 |
||
| CDS GCA 90 bp | GTTTCTCTACCTTCCAGATGTGCAGGCCCACAGCCTGGTAGTCTTTaGCTGGGAGGTTCACCGGTGCAGGACTGGCACCCGCCAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSLPSRCAGPQPGSL*LGGSPVQDWHPPVP Trigger: GGGCACTGGCGGGTGCCAGTCCTGCACCGGTGAACCTCCCAGGCAAAGACTACCAGGCTGTGGGCCTGCACATCTGGAAGGTAGAGAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 ENSMUST00000187342.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCCTGGTCCAGGAGGTGTaGACTCTTCTGAAGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KLACSWLEMHLDAGHRGSLVQEV*TLLKGG Trigger: GCCGCCCTTCAGAAGAGTCAACACCTCCTGGACCAG...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCACAGGGAAAGCAACTGTaGTTCCGGCAGCCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SWLVAGWRCTWMLGTGAAQGKQL*FRQPPA Trigger: AGCAGGAGGCTGCCGGAACAACAGTTGCTTTCCCTG...TGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | CCTGGTGAGAGCTCACAACGCAAGTGGATCTCACGATCATACGCATaGCATGCAGTGCCAGCCACAGGGGGTGCAGACAGGACTCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PGESSQRKWISRSYA*HAVPATGGADRTLG Trigger: GCCCAGAGTCCTGTCTGCACCCCCTGTGGCTGGCACTGCATGCCATGCGTATGATCGTGAGATCCACTTGCGTTGTGAGCTCTCACCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS GCA 90 bp | ATTAGACACCGGTCCTTCAGGTGGAGTAGCTGCCGACAAGTTCTGTaGTCCCCACCACTGGGTCTGTCCTGCTGGCCGCTGGCTTTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: IRHRSFRWSSCRQVL*SPPLGLSCWPLAFV Trigger: AACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCTACTCCACCTGAAGGACCGGTGTCTAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS GCA 90 bp | AGCACAGAGCAGCTGATTAGACACCGGTCCTTCAGGTGGAGTAGCTaGCGACAAGTTCTGTGCTCCCCACCACTGGGTCTGTCCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: STEQLIRHRSFRWSS*RQVLCSPPLGLSCW Trigger: CCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCTACTCCACCTGAAGGACCGGTGTCTAATCAGCTGCTCTGTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS GCA 90 bp | TGGCTCCTGGAGCAGCAGGGAACACGCGTCCTGGTTCTCACCGTCTaGTGGAACCTGAGGGAGATTTTCCCAGTGGAGAAGACTCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: WLLEQQGTRVLVLTV*WNLREIFPVEKTLS Trigger: GCTCAGAGTCTTCTCCACTGGGAAAATCTCCCTCAGGTTCCAGCAGACGGTGAGAACCAGGACGCGTGTTCCCTGCTGCTCCAGGAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | AGCTGCCGACAAGTTCTGTGCTCCCCACCACTGGGTCTGTCCTGCTaGCCGCTGGCTTTCGTTACATCCTTCAAGCTCCACCTTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCRQVLCSPPLGLSC*PLAFVTSFKLHLSA Trigger: GGCAGAAAGGTGGAGCTTGAAGGATGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | CCTTCAGGTGGAGTAGCTGCCGACAAGTTCTGTGCTCCCCACCACTaGGTCTGTCCTGCTGGCCGCTGGCTTTCGTTACATCCTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSGGVAADKFCAPHH*VCPAGRWLSLHPSS Trigger: GCTTGAAGGATGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCTACTCCACCTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | CTGGGGCTAAGCACAGAGCAGCTGATTAGACACCGGTCCTTCAGGTaGAGTAGCTGCCGACAAGTTCTGTGCTCCCCACCACTGGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGLSTEQLIRHRSFR*SSCRQVLCSPPLGL Trigger: CAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCTACTCCACCTGAAGGACCGGTGTCTAATCAGCTGCTCTGTGCTTAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | CTAAGCGCCTCCGGGGTCTCTGAAGAACAGCCACACACACCTCGCTaGGTTCCAAGAGCCGTAACCAGAACTTGGGGTTGCAGGGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSASGVSEEQPHTPR*VPRAVTRTWGCRES Trigger: GCTTTCCCTGCAACCCCAAGTTCTGGTTACGGCTCTTGGAACCCAGCGAGGTGTGTGTGGCTGTTCTTCAGAGACCCCGGAGGCGCTTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | CTCCTGGAGCAGCAGGGAACACGCGTCCTGGTTCTCACCGTCTGCTaGAACCTGAGGGAGATTTTCCCAGTGGAGAAGACTCTGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLEQQGTRVLVLTVC*NLREIFPVEKTLSR Trigger: CCTGCTCAGAGTCTTCTCCACTGGGAAAATCTCCCTCAGGTTCCAGCAGACGGTGAGAACCAGGACGCGTGTTCCCTGCTGCTCCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCAGCAACCAGAACTTGGGGTaGCAGGGAAAGCAACTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LACSWLEMHLDAGHRGSSNQNLG*QGKQLL Trigger: CAACAGTTGCTTTCCCTGCAACCCCAAGTTCTGGTT...GCTGCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CAA 90 bp | GACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCTGACGCTGGTCCAGGAGGTGTaGACTCTTCTGAAGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: DKAPYFSPKVHSQPPELTLVQEV*TLLKGG Trigger: GCCGCCCTTCAGAAGAGTCAACACCTCCTGGACCAG...CGTCAGCTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS GCA 90 bp | AGTAGCTGCCGACAAGTTCTGTGCTCCCCACCACTGGGTCTGTCCTaGTGGCCGCTGGCTTTCGTTACATCCTTCAAGCTCCACCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSCRQVLCSPPLGLS*WPLAFVTSFKLHLS Trigger: AGAAAGGTGGAGCTTGAAGGATGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | ATCTCCCAGCAGCCCTTGCTTCACCTGTCCCTCCCATGGGTTATCTaGAAACAGCTGAGGTGTGGCACAGATTTCCTGGGGTCGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISQQPLLHLSLPWVI*KQLRCGTDFLGSSP Trigger: TGGAGACGACCCCAGGAAATCTGTGCCACACCTCAGCTGTTTCCAGATAACCCATGGGAGGGACAGGTGAAGCAAGGGCTGCTGGGAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | GAACCAGCAATCTCCCAGCAGCCCTTGCTTCACCTGTCCCTCCCATaGGTTATCTGGAAACAGCTGAGGTGTGGCACAGATTTCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EPAISQQPLLHLSLP*VIWKQLRCGTDFLG Trigger: CCCCAGGAAATCTGTGCCACACCTCAGCTGTTTCCAGATAACCCATGGGAGGGACAGGTGAAGCAAGGGCTGCTGGGAGATTGCTGGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS-3UTR CAA 90 bp | AAGCTGGCTTGTAGCTGGCTGGAGATGCACCTGGATGCTGGGCACAGGGGCAGCACAGGTGAAGAAGCCTaGGTATTTCTGGTCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: KLACSWLEMHLDAGHRGSTGEEA*VFLVRP Trigger: TGGTCTGACCAGAAATACCAAGGCTTCTTCACCTGT...GCTGCCCCTGTGCCCAGCATCCAGGTGCATCTCCAGCCAGCTACAAGCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS TCA 90 bp | AGCCCTTGCTTCACCTGTCCCTCCCATGGGTTATCTGGAAACAGCTaGGGTGTGGCACAGATTTCCTGGGGTCGTCTCCAAGTGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPCFTCPSHGLSGNS*GVAQISWGRLQVMS Trigger: GGACATCACTTGGAGACGACCCCAGGAAATCTGTGCCACACCTCAGCTGTTTCCAGATAACCCATGGGAGGGACAGGTGAAGCAAGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CCA 90 bp | TCCTCCCAGTGTCCAAACTGCCAAATCCGACAGGTGAAGAAGCCTTaGTATTTCTGGTCAGACCAGCCTGGCTGTCCTGGAGGGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: SSQCPNCQIRQVKKP*YFWSDQPGCPGGKT Trigger: GGTCTTCCCTCCAGGACAGCCAGGCTGGTCTGACCAGAAATACCAAGGCTTCTTCACCTGTCGGATTTGGCAGTTTGGACACTGGGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAGGACAAAGCACCCTATTTTAGCCCCAAGGTCCACAGCCAACCTCCAGAGCAGGGAAAGCAACTGTaGTTCCGGCAGCCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IQDKAPYFSPKVHSQPPEQGKQL*FRQPPA Trigger: AGCAGGAGGCTGCCGGAACAACAGTTGCTTTCCCTG...CTCTGGAGGTTGGCTGTGGACCTTGGGGCTAAAATAGGGTGCTTTGTCCTGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS TCA 90 bp | CACATCCTTCAAAAAGGTGCTAGGGACGGCCAGGTAGTAGCCTGGTaGGAGCTCACAACGCAAGTGGATCTCACGATCATACGCATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HILQKGARDGQVVAW*ELTTQVDLTIIRMA Trigger: TGCCATGCGTATGATCGTGAGATCCACTTGCGTTGTGAGCTCTCACCAGGCTACTACCTGGCCGTCCCTAGCACCTTTTTGAAGGATGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGGGCACGGGTGATGATGTGGCTAGCTTGGATGCTGTTCTTGCTACTGCTTACAGGTGAAGAAGCCTaGGTATTTCTGGTCAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: TGARVMMWLAWMLFLLLLTGEEA*VFLVRP Trigger: TGGTCTGACCAGAAATACCAAGGCTTCTTCACCTGT...AAGCAGTAGCAAGAACAGCATCCAAGCTAGCCACATCATCACCCGTGCCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS GCA 90 bp | CAAGGCAGACGATCATCTATGGTCACTTCCTCCCAGTGTCCAAACTaGCAAATCCGACAGGTGAAGAAGCCTTGGTATTTCTGGTCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QGRRSSMVTSSQCPN*QIRQVKKPWYFWSD Trigger: GTCTGACCAGAAATACCAAGGCTTCTTCACCTGTCGGATTTGGCAGTTTGGACACTGGGAGGAAGTGACCATAGATGATCGTCTGCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS-3UTR CAA 90 bp | ATATATCAGGAAGATAAAAATGGCTTTGGACTTTGCTTGGTAAGCAACTGGGGCCTGGTCCAGGAGGTGTaGACTCTTCTGAAGGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IYQEDKNGFGLCLVSNWGLVQEV*TLLKGG Trigger: GCCGCCCTTCAGAAGAGTCAACACCTCCTGGACCAG...GCCCCAGTTGCTTACCAAGCAAAGTCCAAAGCCATTTTTATCTTCCTGATATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117814.8 |
||
| CDS GCA 72 bp | CACAGCCTGGTAGTCTTTGCCTGGGAGGTTCACCGGTaGAGGACTGGCACCCGCCAGTGCCCGAGTCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: HSLVVFAWEVHR*RTGTRQCPSLA Trigger: GGCCAGACTCGGGCACTGGCGGGTGCCAGTCCTGCACCGGTGAACCTCCCAGGCAAAGACTACCAGGCTGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 ENSMUST00000187342.2 |
||
| CDS CCA 72 bp | CCAGATGTGCAGGCCCACAGCCTGGTAGTCTTTGCCTaGGAGGTTCACCGGTGCAGGACTGGCACCCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PDVQAHSLVVFA*EVHRCRTGTRQ Trigger: CTGGCGGGTGCCAGTCCTGCACCGGTGAACCTCCCAGGCAAAGACTACCAGGCTGTGGGCCTGCACATCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 ENSMUST00000187342.2 |
||
| CDS CCA 72 bp | GAGTCTGGCCCACTAAGCGCCTCCGGGGTCTCTGTGTaGAGACTCTGTAGGTGGCCGGCCTCTGTGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ESGPLSASGVSV*RLCRWPASVTG Trigger: CCCAGTCACAGAGGCCGGCCACCTACAGAGTCTCCACACAGAGACCCCGGAGGCGCTTAGTGGGCCAGACTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187342.2 |
||
| CDS TCA 72 bp | GCCCGAGTCTGGCCCACTAAGCGCCTCCGGGGTCTCTaGAGAACAGCCACACACACCTCGCTGGGTTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ARVWPTKRLRGL*RTATHTSLGSK Trigger: CTTGGAACCCAGCGAGGTGTGTGTGGCTGTTCTTCAGAGACCCCGGAGGCGCTTAGTGGGCCAGACTCGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS GCA 72 bp | CGGTCCTTCAGGTGGAGTAGCTGCCGACAAGTTCTGTaGTCCCCACCACTGGGTCTGTCCTGCTGGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RSFRWSSCRQVL*SPPLGLSCWPL Trigger: CAGCGGCCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCTACTCCACCTGAAGGACCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS GCA 72 bp | CCTTCCAGATGTGCAGGCCCACAGCCTGGTAGTCTTTaGCTGGGAGGTTCACCGGTGCAGGACTGGCACCCG | + |
|
Preference number: 6 (lower is better) Translates to: PSRCAGPQPGSL*LGGSPVQDWHP Trigger: CGGGTGCCAGTCCTGCACCGGTGAACCTCCCAGGCAAAGACTACCAGGCTGTGGGCCTGCACATCTGGAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 ENSMUST00000187342.2 |
||
| CDS CCA 72 bp | TGCCCTGTCACCCAGGCACCAGGCAGTGTCCGCGTATaGCACAGCACCCTCTCTGTGTGGAGACTCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CPVTQAPGSVRV*HSTLSVWRLCR Trigger: CCTACAGAGTCTCCACACAGAGAGGGTGCTGTGCCATACGCGGACACTGCCTGGTGCCTGGGTGACAGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS TCA 72 bp | GAGGTGTGGCACAGATTTCCTGGGGTCGTCTCCAAGTaGTGTCCTCCCGAAACTGGGCCAGAGGCGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: EVWHRFPGVVSK*CPPETGPEAWT Trigger: TGTCCACGCCTCTGGCCCAGTTTCGGGAGGACATCACTTGGAGACGACCCCAGGAAATCTGTGCCACACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS GCA 72 bp | GCAAGTGGATCTCACGATCATACGCATGGCATGCAGTaGCAGCCACAGGGGGTGCAGACAGGACTCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASGSHDHTHGMQ*QPQGVQTGLWA Trigger: TGCCCAGAGTCCTGTCTGCACCCCCTGTGGCTGGCACTGCATGCCATGCGTATGATCGTGAGATCCACTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS CCA 72 bp | GGAGTAGCTGCCGACAAGTTCTGTGCTCCCCACCACTaGGTCTGTCCTGCTGGCCGCTGGCTTTCGTTACAT | + |
|
Preference number: 6 (lower is better) Translates to: GVAADKFCAPHH*VCPAGRWLSLH Trigger: ATGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCTACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CAA 90 bp | AAGGGCGGCACAGGCACACAGGAACCAGCAATCTCCCAGCAGCCCTaGCTTCACCTGTCCCTCCCATGGGTTATCTGGAAACAGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: KGGTGTQEPAISQQP*LHLSLPWVIWKQLR Trigger: CCTCAGCTGTTTCCAGATAACCCATGGGAGGGACAGGTGAAGCAAGGGCTGCTGGGAGATTGCTGGTTCCTGTGTGCCTGTGCCGCCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
||
| CDS CAA 90 bp | TCCAAGAGCCGTAACCAGAACTTGGGGTTGCAGGGAAAGCAACTGTaGTTCCGGCAGCCTCCTGCTGACTGCCCTGTCACCCAGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SKSRNQNLGLQGKQL*FRQPPADCPVTQAP Trigger: TGGTGCCTGGGTGACAGGGCAGTCAGCAGGAGGCTGCCGGAACAACAGTTGCTTTCCCTGCAACCCCAAGTTCTGGTTACGGCTCTTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
||
| CDS GCA 72 bp | CGACAAGTTCTGTGCTCCCCACCACTGGGTCTGTCCTaGTGGCCGCTGGCTTTCGTTACATCCTTCAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RQVLCSPPLGLS*WPLAFVTSFKL Trigger: GAGCTTGAAGGATGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS GCA 72 bp | CAGCTGATTAGACACCGGTCCTTCAGGTGGAGTAGCTaGCGACAAGTTCTGTGCTCCCCACCACTGGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: QLIRHRSFRWSS*RQVLCSPPLGL Trigger: CAGACCCAGTGGTGGGGAGCACAGAACTTGTCGGCAGCTACTCCACCTGAAGGACCGGTGTCTAATCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS CCA 72 bp | CAAGTTCTGTGCTCCCCACCACTGGGTCTGTCCTGCTaGCCGCTGGCTTTCGTTACATCCTTCAAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: QVLCSPPLGLSC*PLAFVTSFKLH Trigger: GTGGAGCTTGAAGGATGTAACGAAAGCCAGCGGCCAGCAGGACAGACCCAGTGGTGGGGAGCACAGAACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS CCA 72 bp | CTCCTGAGCTCCTGCAGATCTGAGATGATGAAGGCATaGAACTCTCCGAGTTCCCTGGCACCTGCTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LLSSCRSEMMKA*NSPSSLAPALG Trigger: CCCCAGAGCAGGTGCCAGGGAACTCGGAGAGTTCCATGCCTTCATCATCTCAGATCTGCAGGAGCTCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 ENSMUST00000187342.2 |
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| CDS CCA 72 bp | TCCGGGGTCTCTGAAGAACAGCCACACACACCTCGCTaGGTTCCAAGAGCCGTAACCAGAACTTGGGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: SGVSEEQPHTPR*VPRAVTRTWGC Trigger: GCAACCCCAAGTTCTGGTTACGGCTCTTGGAACCCAGCGAGGTGTGTGTGGCTGTTCTTCAGAGACCCCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS GCA 72 bp | ACAACGCAAGTGGATCTCACGATCATACGCATGGCATaGAGTGCCAGCCACAGGGGGTGCAGACAGGACTCT | + |
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Preference number: 6 (lower is better) Translates to: TTQVDLTIIRMA*SASHRGCRQDS Trigger: AGAGTCCTGTCTGCACCCCCTGTGGCTGGCACTGCATGCCATGCGTATGATCGTGAGATCCACTTGCGTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS CCA 72 bp | CAGCCCTTGCTTCACCTGTCCCTCCCATGGGTTATCTaGAAACAGCTGAGGTGTGGCACAGATTTCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QPLLHLSLPWVI*KQLRCGTDFLG Trigger: CCCCAGGAAATCTGTGCCACACCTCAGCTGTTTCCAGATAACCCATGGGAGGGACAGGTGAAGCAAGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS CCA 72 bp | AGCACAGAGCAGCTGATTAGACACCGGTCCTTCAGGTaGAGTAGCTGCCGACAAGTTCTGTGCTCCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: STEQLIRHRSFR*SSCRQVLCSPP Trigger: TGGTGGGGAGCACAGAACTTGTCGGCAGCTACTCCACCTGAAGGACCGGTGTCTAATCAGCTGCTCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS CCA 72 bp | ACACCTCGCTGGGTTCCAAGAGCCGTAACCAGAACTTaGGGTTGCAGGGAAAGCAACTGTTGTTCCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TPRWVPRAVTRT*GCRESNCCSGS Trigger: GCTGCCGGAACAACAGTTGCTTTCCCTGCAACCCCAAGTTCTGGTTACGGCTCTTGGAACCCAGCGAGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS CCA 72 bp | CAGCAGGGAACACGCGTCCTGGTTCTCACCGTCTGCTaGAACCTGAGGGAGATTTTCCCAGTGGAGAAGACT | + |
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Preference number: 6 (lower is better) Translates to: QQGTRVLVLTVC*NLREIFPVEKT Trigger: AGTCTTCTCCACTGGGAAAATCTCCCTCAGGTTCCAGCAGACGGTGAGAACCAGGACGCGTGTTCCCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152983.8 |
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| CDS CAA 72 bp | TCGCTGGGTTCCAAGAGCCGTAACCAGAACTTGGGGTaGCAGGGAAAGCAACTGTTGTTCCGGCAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLGSKSRNQNLG*QGKQLLFRQPP Trigger: AGGAGGCTGCCGGAACAACAGTTGCTTTCCCTGCAACCCCAAGTTCTGGTTACGGCTCTTGGAACCCAGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS CAA 72 bp | CACACCTCGCTGGGTTCCAAGAGCCGTAACCAGAACTaGGGGTTGCAGGGAAAGCAACTGTTGTTCCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: HTSLGSKSRNQN*GLQGKQLLFRQ Trigger: CTGCCGGAACAACAGTTGCTTTCCCTGCAACCCCAAGTTCTGGTTACGGCTCTTGGAACCCAGCGAGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS CAA 90 bp | TTCCTCCCAGTGTCCAAACTGCCAAATCCGACAGGTGAAGAAGCCTaGGTATTTCTGGTCAGACCAGCCTGGCTGTCCTGGAGGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: FLPVSKLPNPTGEEA*VFLVRPAWLSWRED Trigger: GTCTTCCCTCCAGGACAGCCAGGCTGGTCTGACCAGAAATACCAAGGCTTCTTCACCTGTCGGATTTGGCAGTTTGGACACTGGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS TCA 72 bp | TTCACCTGTCCCTCCCATGGGTTATCTGGAAACAGCTaGGGTGTGGCACAGATTTCCTGGGGTCGTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: FTCPSHGLSGNS*GVAQISWGRLQ Trigger: TTGGAGACGACCCCAGGAAATCTGTGCCACACCTCAGCTGTTTCCAGATAACCCATGGGAGGGACAGGTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS CAA 72 bp | GTGTCCAAACTGCCAAATCCGACAGGTGAAGAAGCCTaGGTATTTCTGGTCAGACCAGCCTGGCTGTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSKLPNPTGEEA*VFLVRPAWLSW Trigger: CCAGGACAGCCAGGCTGGTCTGACCAGAAATACCAAGGCTTCTTCACCTGTCGGATTTGGCAGTTTGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS TCA 72 bp | CTTCCTCCCAGTGTCCAAACTGCCAAATCCGACAGGTaGAGAAGCCTTGGTATTTCTGGTCAGACCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: LPPSVQTAKSDR*RSLGISGQTSL Trigger: CAGGCTGGTCTGACCAGAAATACCAAGGCTTCTTCACCTGTCGGATTTGGCAGTTTGGACACTGGGAGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS TCA 72 bp | CAAAAAGGTGCTAGGGACGGCCAGGTAGTAGCCTGGTaGGAGCTCACAACGCAAGTGGATCTCACGATCATA | + |
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Preference number: 6 (lower is better) Translates to: QKGARDGQVVAW*ELTTQVDLTII Trigger: TATGATCGTGAGATCCACTTGCGTTGTGAGCTCTCACCAGGCTACTACCTGGCCGTCCCTAGCACCTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027488.11 ENSMUST00000152983.8 |
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| CDS CCA 72 bp | TGTCCAAACTGCCAAATCCGACAGGTGAAGAAGCCTTaGTATTTCTGGTCAGACCAGCCTGGCTGTCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: CPNCQIRQVKKP*YFWSDQPGCPG Trigger: TCCAGGACAGCCAGGCTGGTCTGACCAGAAATACCAAGGCTTCTTCACCTGTCGGATTTGGCAGTTTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS CCA 72 bp | TTTTCCAGTAAGGGAAGCCAGAACACATCCTCTCTCTaGCACCGGGAAAAGCAGAGTCTCCCGGCAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: FSSKGSQNTSSL*HREKQSLPARQ Trigger: TTGTCTTGCCGGGAGACTCTGCTTTTCCCGGTGCCAGAGAGAGGATGTGTTCTGGCTTCCCTTACTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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| CDS GCA 72 bp | CGATCATCTATGGTCACTTCCTCCCAGTGTCCAAACTaGCAAATCCGACAGGTGAAGAAGCCTTGGTATTTC | + |
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Preference number: 6 (lower is better) Translates to: RSSMVTSSQCPN*QIRQVKKPWYF Trigger: GAAATACCAAGGCTTCTTCACCTGTCGGATTTGGCAGTTTGGACACTGGGAGGAAGTGACCATAGATGATCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027488.11 ENSMUST00000117814.8 ENSMUST00000152983.8 |
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