Pregenerated sensors for CAPN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024942Ensembl transcript IDs: ENSMUST00000025891.11, ENSMUST00000164843.10, ENSMUST00000235138.2, ENSMUST00000236537.2, ENSMUST00000237519.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTGGCTTaGCAGAGGAAGAATGGAAGAACAAAGGCAACTGGAGCGGAGCGA | + |
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Preference number: 1 (lower is better) Translates to: GVARRGGVAWRGGVA*QRKNGRTKATGAER Trigger: TCGCTCCGCTCCAGTTGCCTTTGTTCTTCCATTCTTCCTCTGCCAAGCCACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CCA 90 bp | AGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTaGCTTGGCAGAGGAAGAATGGAAGAACAAAGGCAACTGGAGCGG | + |
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Preference number: 1 (lower is better) Translates to: SLEWHGGEAWLGGEA*LGRGRMEEQRQLER Trigger: CCGCTCCAGTTGCCTTTGTTCTTCCATTCTTCCTCTGCCAAGCCACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CCA 90 bp | GGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTaGCTTGGCGGGGAGGCGTGGCTTGGCAGAGGAAGAATGGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: GTRSWCSLEWHGGEA*LGGEAWLGRGRMEE Trigger: TTCTTCCATTCTTCCTCTGCCAAGCCACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CCA 90 bp | GCCAGGAAGTTCCTGGTGGGCACACAGGCTAGGAGAGGTGTAGTTTaGTTTGCAGAGGGATCTTGGCTGCTGCACAGAAGGCACAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: ARKFLVGTQARRGVV*FAEGSWLLHRRHRK Trigger: CTTCCTGTGCCTTCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGTGCCCACCAGGAACTTCCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR TCA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACATCAGGGTGCCCAGTCTaGCTACAGGGGCAGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTSGCPV*LQGQGG Trigger: CCCTCCCTGCCCCTGTAGTCAGACTGGGCACCCTGA...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTGGGATGGGGAGGGCCTaGGCACCCTCGGGGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIGMGRA*APSGPG Trigger: TCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCCC...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CAA 90 bp | CCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTaGGCGGGGAGGCGTGGCTTGGCAGAGGAAGAATGGAAGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: PEAGVVWSGTAGRRG*AGRRGLAEEEWKNK Trigger: TTTGTTCTTCCATTCTTCCTCTGCCAAGCCACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTCGGGGAGGCGTGGCTTaGCAGAGGAAGAATGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLRGGVA*QRKNGR Trigger: TCTTCCATTCTTCCTCTGCCAAGCCACGCCTCCCCG...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACAGAGCAGGGAGGGCCCCGTaGCTGCCCAGAGCAGTCGAA | + |
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Preference number: 2 (lower is better) Translates to: QARRGVVWFAEGSWLLHRAGRAP*LPRAVE Trigger: TTCGACTGCTCTGGGCAGTCACGGGGCCCTCCCTGC...TCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTGCCCCGAGGCAGGGATaGGCAGGGAGCTGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIAPRQG*AGSCLP Trigger: AGGAAGACAGCTCCCTGCTCATCCCTGCCTCGGGGC...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR TCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACGAAGGCACAGGAAGGTaGGTCTGGCTGTGGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TQARRGVVWFAEGSWLLHEGTGR*VWLWGS Trigger: GGAGCCCCACAGCCAGACTCACCTTCCTGTGCCTTC...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR CCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACCGGGGAGGCGTGGCTTaGCAGAGGAAGAATGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TQARRGVVWFAEGSWLLHRGGVA*QRKNGR Trigger: TCTTCCATTCTTCCTCTGCCAAGCCACGCCTCCCCG...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTGCCCCGAGGCAGGGATaGGCAGGGAGCTGTCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSAPRQG*AGSCLP Trigger: AGGAAGACAGCTCCCTGCTCATCCCTGCCTCGGGGC...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR GCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACACAGGAGGACAAGGGTaGCTTCCTTCCTGTTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: TQARRGVVWFAEGSWLLHTGGQG*LPSCSE Trigger: CTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTGT...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTTTGGCAGAGGAAGAATaGAAGAACAAAGGCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: SLPHPQFLHNQYTHPSGILAEEE*KNKGNW Trigger: CCAGTTGCCTTTGTTCTTCCATTCTTCCTCTGCCAA...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTCCTTCCTTCCTGTTCTaGGGAAGGCACCAGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSPSFLF*GRHQKL Trigger: CAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGG...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR CCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACTTGGCAGAGGAAGAATaGAAGAACAAAGGCAACTGG | + |
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Preference number: 2 (lower is better) Translates to: TQARRGVVWFAEGSWLLHLAEEE*KNKGNW Trigger: CCAGTTGCCTTTGTTCTTCCATTCTTCCTCTGCCAA...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR CCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTAGGAGAGGTGTAGTTTaGTTTGCAGAGGGATCTTGG | + |
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Preference number: 2 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSRRGVV*FAEGSW Trigger: CCAAGATCCCTCTGCAAACCAAACTACACCTCTCCT...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CCA 72 bp | AGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTaGCTTGGCGGGGAGGCGTGGCTTGGCAGAGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SWCSLEWHGGEA*LGGEAWLGRGR Trigger: TCTTCCTCTGCCAAGCCACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CCA 72 bp | TCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTaGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCG | + |
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Preference number: 3 (lower is better) Translates to: SEEGTRSWCSLE*HGGEAWLGGEA Trigger: CGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CCA 72 bp | CCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTaGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: PVLRKAPEAGVV*SGTAGRRGLAG Trigger: CCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR CAA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGGGGAGGCGTGGCTaGGCAGAGGAAGAATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: CSEEGTRSWCSLEWHGGEAGRRG*AEEEWK Trigger: CTTCCATTCTTCCTCTGCCAAGCCACGCCTCCCCGC...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR TCA 72 bp | GAAGGTGAGTCTGGCTGTGGGGCTCCCACAGTGAGGTaGGGCCTTCAACACCCGGGTGCAGACAGGGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: EGESGCGAPTVR*GLQHPGADREL Trigger: TAGCTCCCTGTCTGCACCCGGGTGTTGAAGGCCTCACCTCACTGTGGGAGCCCCACAGCCAGACTCACCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR-3UTR CAA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTGCGGGGAGGCGTGGCTaGGCAGAGGAAGAATGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIAGRRG*AEEEWK Trigger: CTTCCATTCTTCCTCTGCCAAGCCACGCCTCCCCGC...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CCA 72 bp | TTCCTGGTGGGCACACAGGCTAGGAGAGGTGTAGTTTaGTTTGCAGAGGGATCTTGGCTGCTGCACAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: FLVGTQARRGVV*FAEGSWLLHRR Trigger: CCTTCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGTGCCCACCAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| 3UTR CCA 72 bp | GCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTaGCTGCTGCACAGAAGGCACAGGAAGGTGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: ARRGVVWFAEGS*LLHRRHRKVSL Trigger: CAGACTCACCTTCCTGTGCCTTCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR TCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTCCTGGCCCAGGTACTTaGTGGCGTTTTCATGGCGGC | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRPGPGT*WRFHGG Trigger: GCCGCCATGAAAACGCCATCAAGTACCTGGGCCAGG...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR GCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTCGAAGGCCTCTGAGGTaGAGCCTCCCGAAAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRRRPLR*SLPKEP Trigger: AGGCTCTTTCGGGAGGCTGCACCTCAGAGGCCTTCG...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTGGGAAGGCCTCGTCTTaGAAGAGGACCCCACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRGKASS*KRTPLC Trigger: GCAGAGTGGGGTCCTCTTCCAAGACGAGGCCTTCCC...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR TCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTTTGAAGCCCAGGCTATaGGAAACCGGAGGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRLKPRL*ETGGKA Trigger: GGCCTTCCCTCCGGTTTCTCATAGCCTGGGCTTCAA...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR GCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTCGCTCCAGAATTCGTTaGCCTGGGCAGAGTGCACGA | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRRSRIR*PGQSAR Trigger: TCGTGCACTCTGCCCAGGGCAACGAATTCTGGAGCG...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTGCGCCCGAGAAGCGTTaGCCAGGAAGAAATCACGCT | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRAPEKR*PGRNHA Trigger: AGCGTGATTTCTTCCTGGCCAACGCTTCTCGGGCGC...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR TCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTGATGAACTGGGGGTTTaGCATCAGTTCCGTAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRDELGV*HQFRRP Trigger: CGGCCTACGGAACTGATGTCAAACCCCCAGTTCATC...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR TCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTTGGCTCCATCCACGATaGACTGGGGGTTTGACATCA | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRWLHPR*TGGLTS Trigger: TGATGTCAAACCCCCAGTTCATCGTGGATGGAGCCA...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTACACTGCAAAACCGATaGTCTCCATGTCCCGGCCAA | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRTLQNR*SPCPGQ Trigger: TTGGCCGGGACATGGAGACCATCGGTTTTGCAGTGT...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTAGGTTGGCCTGGATCTaGTCATCTAGTTCCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRRLAWI*SSSSWV Trigger: GACCCAGGAACTAGATGACCAGATCCAGGCCAACCT...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR GCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTCGAAGGCCTCTGAGGTaGAGCCTCCCGAAAGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLRRPLR*SLPKEP Trigger: AGGCTCTTTCGGGAGGCTGCACCTCAGAGGCCTTCG...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR GCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTCTCCATGTCATCCCCTaGCAACTTGCTGAACAAGGT | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRLHVIP*QLAEQG Trigger: ACCTTGTTCAGCAAGTTGGCAGGGGATGACATGGAG...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR GCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTCATAGGCACTCATGCTaGCAGACTTGTCCAGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRHRHSC*QTCPGQ Trigger: TTGACCTGGACAAGTCTGGCAGCATGAGTGCCTATG...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTTCTCATCAGGGAGGTTaGCCTGGATCTGGTCATCTA | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRSHQGG*PGSGHL Trigger: TAGATGACCAGATCCAGGCCAACCTCCCTGATGAGA...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR TCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTTTGAAGCCCAGGCTATaGGAAACCGGAGGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLLKPRL*ETGGKA Trigger: GGCCTTCCCTCCGGTTTCTCATAGCCTGGGCTTCAA...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR TCA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGTCCTCGAAGGCCTCTaGGGTGCAGCCTCCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSEEGTRSWCSLEWHGGEVLEGL*GAASRK Trigger: CTTTCGGGAGGCTGCACCTCAGAGGCCTTCGAGGAC...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTCGCTTCTTCTGTACTTaGGCTGACACCCCGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLRFFCT*ADTPVQ Trigger: CTGCACCGGGGTGTCAGCCCAAGTACAGAAGAAGCG...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CCA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTTGCCCTCGTAAAATGTaGTATTCCAATTCCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRCPRKM*YSNSGG Trigger: CCCTCCGGAATTGGAATACCACATTTTACGAGGGCA...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR TCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTCCAGGGCCTTTAGAATaGTCTGGTAGAGGTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLPGPLE*SGRGRW Trigger: CCAGCGACCTCTACCAGATCATTCTAAAGGCCCTGG...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTCCCAGCCTTCTTCTCTaGGAAGAAGCGCAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLPSLLL*EEAQQE Trigger: TTCCTGCTGCGCTTCTTCTCAGAGAAGAAGGCTGGG...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTCAGAATTCGTTGCCCTaGGCAGAGTGCACGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLQNSLP*AECTNT Trigger: GGTGTTCGTGCACTCTGCCCAGGGCAACGAATTCTG...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTTGGCTCCATCCACGATaGACTGGGGGTTTGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLWLHPR*TGGLTS Trigger: TGATGTCAAACCCCCAGTTCATCGTGGATGGAGCCA...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCGTCCTCGAAGGCCTCTaGGGTGCAGCCTCCCGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGVLEGL*GAASRK Trigger: CTTTCGGGAGGCTGCACCTCAGAGGCCTTCGAGGAC...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGTGCCATCTCGATCCATaGGGTTCACCATGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CSEEGTRSWCSLEWHGGECHLDP*GSPCCG Trigger: GCCGCAGCATGGTGAACCTCATGGATCGAGATGGCA...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGAAGAGGACCCCACTCTaGAGGCATCTTGCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CSEEGTRSWCSLEWHGGEKRTPL*RHLARS Trigger: GCTTCGGGCAAGATGCCTGCAGAGTGGGGTCCTCTT...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACAAACCGGATCTTGAACTaGGGGTTTACCCAGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTNRILN*GFTQKV Trigger: TACCTTCTGGGTAAACCCCCAGTTCAAGATCCGGTT...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTTGTTGGGCTCGAAGGTaGAGGGCACCACTATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLCWARR*RAPLCT Trigger: AGTACATAGTGGTGCCCTCCACCTTCGAGCCCAACA...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGCCCAGCCTTCTTCTCTaGGAAGAAGCGCAGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSEEGTRSWCSLEWHGGEPSLLL*EEAQQE Trigger: TTCCTGCTGCGCTTCTTCTCAGAGAAGAAGGCTGGG...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTCATAGGCACTCATGCTaGCAGACTTGTCCAGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLHRHSC*QTCPGQ Trigger: TTGACCTGGACAAGTCTGGCAGCATGAGTGCCTATG...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | CAGGAGGACAAGGGTGCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGGGAAGGCCTCGTCTTaGAAGAGGACCCCACTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEDKGAFLPVLRKAPEAGGKASS*KRTPLC Trigger: GCAGAGTGGGGTCCTCTTCCAAGACGAGGCCTTCCC...ACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTTCTCATCAGGGAGGTTaGCCTGGATCTGGTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLSHQGG*PGSGHL Trigger: TAGATGACCAGATCCAGGCCAACCTCCCTGATGAGA...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCCTTCTGTACTTGGGCTaGCACCCCGGTGCAGTACAC | + |
|
Preference number: 4 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGLLYLG*HPGAVH Trigger: GTGTACTGCACCGGGGTGTCAGCCCAAGTACAGAAG...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCCCAACAGTCCCCCAGTaGTCCCTGGCAGATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGPTVPQ*SLADVC Trigger: ACAGACATCTGCCAGGGAGCACTGGGGGACTGTTGG...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGACAAGGGTGCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTCCAACAGTCCCCCAGTaGTCCCTGGCAGATGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEDKGAFLPVLRKAPEAGPTVPQ*SLADVC Trigger: ACAGACATCTGCCAGGGAGCACTGGGGGACTGTTGG...ACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGACAAGGGTGCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTCGCTCCAGAATTCGTTaGCCTGGGCAGAGTGCACGA | + |
|
Preference number: 4 (lower is better) Translates to: QEDKGAFLPVLRKAPEAGRSRIR*PGQSAR Trigger: TCGTGCACTCTGCCCAGGGCAACGAATTCTGGAGCG...ACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGTCACAGAGTACGCATaGCCCCTCACCAGGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CSEEGTRSWCSLEWHGGEVTEYA*PLTRFL Trigger: TAAGAACCTGGTGAGGGGCCATGCGTACTCTGTGAC...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGAGGTTGGCCTGGATCTaGTCATCTAGTTCCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CSEEGTRSWCSLEWHGGERLAWI*SSSSWV Trigger: GACCCAGGAACTAGATGACCAGATCCAGGCCAACCT...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGACAAGGGTGCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGGCTTTCTCCAGCAGTaGGCTCCAGAATTCGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QEDKGAFLPVLRKAPEAGGFLQQ*APEFVA Trigger: GGCAACGAATTCTGGAGCGCACTGCTGGAGAAAGCC...ACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACAGCAAACATAGTCAGCTaGAGCCACTTAAATAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTANIVS*SHLNRS Trigger: TGATCTATTTAAGTGGCTCCAGCTGACTATGTTTGC...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTGATGAACTGGGGGTTTaGCATCAGTTCCGTAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIDELGV*HQFRRP Trigger: CGGCCTACGGAACTGATGTCAAACCCCCAGTTCATC...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | CAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACAGAGCAGCAAGTCATCTATaGCCACGTCGACCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QARRGVVWFAEGSWLLHRAASHL*PRRPTP Trigger: GGGAGTGGGTCGACGTGGTCATAGATGACTTGCTGC...TCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACGCAGCAAGTCATCTATaGCCACGTCGACCCACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQARRGVVWFAEGSWLLHAASHL*PRRPTP Trigger: GGGAGTGGGTCGACGTGGTCATAGATGACTTGCTGC...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCAGGGCCTTTAGAATaGTCTGGTAGAGGTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIPGPLE*SGRGRW Trigger: CCAGCGACCTCTACCAGATCATTCTAAAGGCCCTGG...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACTGCCATCTCGATCCATaGGGTTCACCATGCTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQARRGVVWFAEGSWLLHCHLDP*GSPCCG Trigger: GCCGCAGCATGGTGAACCTCATGGATCGAGATGGCA...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCCGAAGGTTGATGAAGTaGTCTGACTGCGCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGRRLMK*SDCARE Trigger: TTCTCGGGCGCAGTCAGAGCACTTCATCAACCTTCG...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACCGCTTCTTCTGTACTTaGGCTGACACCCCGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQARRGVVWFAEGSWLLHRFFCT*ADTPVQ Trigger: CTGCACCGGGGTGTCAGCCCAAGTACAGAAGAAGCG...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTGGTAAGTTACCTGCTTaGCGCCCGTCACAGAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIGKLPA*RPSQST Trigger: CGTACTCTGTGACGGGCGCCAAGCAGGTAACTTACC...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCTCAGGGAGGTTGGCCTaGATCTGGTCATCTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGSGRLA*IWSSSS Trigger: GGAACTAGATGACCAGATCCAGGCCAACCTCCCTGA...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCCTCCATGTCATCCCCTaGCAACTTGCTGAACAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGLHVIP*QLAEQG Trigger: ACCTTGTTCAGCAAGTTGGCAGGGGATGACATGGAG...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCTCTCATAGGCACTCATaGTGCCAGACTTGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGSHRHS*CQTCPG Trigger: ACCTGGACAAGTCTGGCAGCATGAGTGCCTATGAGA...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACAGACCAGCTTCCCGTCCTTaGTGGGCAGCAAGTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: QARRGVVWFAEGSWLLHRPASRP*WAASHL Trigger: TAGATGACTTGCTGCCCACCAAGGACGGGAAGCTGG...TCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTGTCACAGAGTACGCATaGCCCCTCACCAGGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIVTEYA*PLTRFL Trigger: TAAGAACCTGGTGAGGGGCCATGCGTACTCTGTGAC...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACGGTAAGTTACCTGCTTaGCGCCCGTCACAGAGTACG | + |
|
Preference number: 4 (lower is better) Translates to: TQARRGVVWFAEGSWLLHGKLPA*RPSQST Trigger: CGTACTCTGTGACGGGCGCCAAGCAGGTAACTTACC...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCTGGTCATCTAGTTCCTaGGTCCCAGCCTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGWSSSS*VPAFFS Trigger: AGAGAAGAAGGCTGGGACCCAGGAACTAGATGACCA...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR TCA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACGAGGACCCAGTTCCTTaGAGCCCAGGCTATGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQARRGVVWFAEGSWLLHEDPVP*SPGYEK Trigger: TTTCTCATAGCCTGGGCTTCAAGGAACTGGGTCCTC...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTTCTCATAGGCACTCATaGTGCCAGACTTGTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLPHPQFLHNQYTHPSGISHRHS*CQTCPG Trigger: ACCTGGACAAGTCTGGCAGCATGAGTGCCTATGAGA...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACAGAACACTGCAAAACCGATaGTCTCCATGTCCCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QARRGVVWFAEGSWLLHRTLQNR*SPCPGQ Trigger: TTGGCCGGGACATGGAGACCATCGGTTTTGCAGTGT...TCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTTGGTCATCTAGTTCCTaGGTCCCAGCCTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIWSSSS*VPAFFS Trigger: AGAGAAGAAGGCTGGGACCCAGGAACTAGATGACCA...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACAGACCATCCACGATGAACTaGGGGTTTGACATCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QARRGVVWFAEGSWLLHRPSTMN*GFDISS Trigger: GGAACTGATGTCAAACCCCCAGTTCATCGTGGATGG...TCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTGCGCCCGAGAAGCGTTaGCCAGGAAGAAATCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSAPEKR*PGRNHA Trigger: AGCGTGATTTCTTCCTGGCCAACGCTTCTCGGGCGC...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTGGCTTTCTCCAGCAGTaGGCTCCAGAATTCGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSGFLQQ*APEFVA Trigger: GGCAACGAATTCTGGAGCGCACTGCTGGAGAAAGCC...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTCCAGCTTCCCGTCCTTaGTGGGCAGCAAGTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSPASRP*WAASHL Trigger: TAGATGACTTGCTGCCCACCAAGGACGGGAAGCTGG...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTCGAAGGTTGATGAAGTaGTCTGACTGCGCCCGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSRRLMK*SDCARE Trigger: TTCTCGGGCGCAGTCAGAGCACTTCATCAACCTTCG...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR GCA 90 bp | CAGGAGGACAAGGGTGCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTGATTATGAGTTCATaGAGCTTCTTGTTAAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEDKGAFLPVLRKAPEAGVIMSS*SFLLSL Trigger: CAAGCTTAACAAGAAGCTGCATGAACTCATAATCAC...ACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTTGTTGGGCTCGAAGGTaGAGGGCACCACTATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSCWARR*RAPLCT Trigger: AGTACATAGTGGTGCCCTCCACCTTCGAGCCCAACA...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTTCAGGGAGGTTGGCCTaGATCTGGTCATCTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSSGRLA*IWSSSS Trigger: GGAACTAGATGACCAGATCCAGGCCAACCTCCCTGA...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | CAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACAGAGCAAACATAGTCAGCTaGAGCCACTTAAATAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QARRGVVWFAEGSWLLHRANIVS*SHLNRS Trigger: TGATCTATTTAAGTGGCTCCAGCTGACTATGTTTGC...TCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTTGCCCTCGTAAAATGTaGTATTCCAATTCCGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSCPRKM*YSNSGG Trigger: CCCTCCGGAATTGGAATACCACATTTTACGAGGGCA...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CCA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTAACCGGATCTTGAACTaGGGGTTTACCCAGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSNRILN*GFTQKV Trigger: TACCTTCTGGGTAAACCCCCAGTTCAAGATCCGGTT...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTGCGCTCCAGAATTCGTaGCCCTGGGCAGAGTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRALQNS*PWAECT Trigger: CGTGCACTCTGCCCAGGGCAACGAATTCTGGAGCGC...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACAGCGCTCCAGAATTCGTaGCCCTGGGCAGAGTGCACG | + |
|
Preference number: 5 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTALQNS*PWAECT Trigger: CGTGCACTCTGCCCAGGGCAACGAATTCTGGAGCGC...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS CCA 90 bp | GCTGACCCGCCAGCTCCCGAGGGACCTGGTACACTGCAAAACCGATaGTCTCCATGTCCCGGCCAAAGCGACGCTCCCTGCGGCGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ADPPAPEGPGTLQNR*SPCPGQSDAPCGGV Trigger: AACACCGCCGCAGGGAGCGTCGCTTTGGCCGGGACATGGAGACCATCGGTTTTGCAGTGTACCAGGTCCCTCGGGAGCTGGCGGGTCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS GCA 90 bp | GTCTCCATGTCCCGGCCAAAGCGACGCTCCCTGCGGCGGTGTTTCTaGATGAGGGCCAGCAAGAAGCTGCAGCCCGACTCCCGGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSMSRPKRRSLRRCF*MRASKKLQPDSRLS Trigger: TGACAACCGGGAGTCGGGCTGCAGCTTCTTGCTGGCCCTCATGCAGAAACACCGCCGCAGGGAGCGTCGCTTTGGCCGGGACATGGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACACCCAAGCCCAGCTCCTaGTCCCGCTTCTTCTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTPKPSS*SRFFCT Trigger: AGTACAGAAGAAGCGGGACAAGGAGCTGGGCTTGGG...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACAAGACCCAGCTTCCCGTaGCCATCTCGATCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTRPSFP*PSRSMR Trigger: CCTCATGGATCGAGATGGCAACGGGAAGCTGGGTCT...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS TCA 90 bp | CCATGTCCCGGCCAAAGCGACGCTCCCTGCGGCGGTGTTTCTGCATaGGGGCCAGCAAGAAGCTGCAGCCCGACTCCCGGTTGTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: PCPGQSDAPCGGVSA*GPARSCSPTPGCHS Trigger: ACTATGACAACCGGGAGTCGGGCTGCAGCTTCTTGCTGGCCCTCATGCAGAAACACCGCCGCAGGGAGCGTCGCTTTGGCCGGGACATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS GCA 90 bp | CAAGTGCACAGGCTGACCCGCCAGCTCCCGAGGGACCTGGTACACTaGAAAACCGATGGTCTCCATGTCCCGGCCAAAGCGACGCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: QVHRLTRQLPRDLVH*KTDGLHVPAKATLP Trigger: AGGGAGCGTCGCTTTGGCCGGGACATGGAGACCATCGGTTTTGCAGTGTACCAGGTCCCTCGGGAGCTGGCGGGTCAGCCTGTGCACTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTTGCGCCCGAGAAGCGTaGGCCAGGAAGAAATCACGC | + |
|
Preference number: 5 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLCAREA*ARKKSR Trigger: GCGTGATTTCTTCCTGGCCAACGCTTCTCGGGCGCA...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTATGGTCTGTAGCTCCTaGACGCTGATCTCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRMVCSS*TLISMS Trigger: TGACATGGAGATCAGCGTCAAGGAGCTACAGACCAT...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACAGCGTCCGGTGTAAGGTaGCAGATTTCCAGTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTASGVR*QISSLV Trigger: CACCAAACTGGAAATCTGCAACCTTACACCGGACGC...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACACTGACTTCCCGAAGGTaGATGAAGTGCTCTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTLTSRR*MKCSDC Trigger: GCAGTCAGAGCACTTCATCAACCTTCGGGAAGTCAG...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACAAGACAGCACACAAAGTaGTCAAAGTCCACGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTRQHTK*SKSTAR Trigger: CCTGGCCGTGGACTTTGACAACTTTGTGTGCTGTCT...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGGCGGGGAGGCGTAGTTCATGCAGCTTCTaGTTAAGCTTGAAGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: AGVVWSGTAGRRGLAGRRSSCSF*LSLKPA Trigger: TGCAGGCTTCAAGCTTAACAAGAAGCTGCATGAACT...ACGCCTCCCCGCCAAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGTCCCCATCCTCCATCTaGACCCTCAGCTGCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: CSEEGTRSWCSLEWHGGESPSSI*TLSCSR Trigger: ACGAGAGCAGCTGAGGGTCAAGATGGAGGATGGGGA...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTGCGTCCGGTGTAAGGTaGCAGATTTCCAGTTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLASGVR*QISSLV Trigger: CACCAAACTGGAAATCTGCAACCTTACACCGGACGC...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS TCA 90 bp | GCAGGCATCTTGCCCGAAGCGTTTCATAATCCTGGCCCAGGTACTTaGTGGCGTTTTCATGGCGGCCCAAGCCCAGCTCCTTGTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: AGILPEAFHNPGPGT*WRFHGGPSPAPCPA Trigger: AGCGGGACAAGGAGCTGGGCTTGGGCCGCCATGAAAACGCCATCAAGTACCTGGGCCAGGATTATGAAACGCTTCGGGCAAGATGCCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 ENSMUST00000235138.2 ENSMUST00000237519.2 |
||
| CDS TCA 90 bp | CGAGAAGCGTTGGCCAGGAAGAAATCACGCTTCAAGTGCACAGGCTaGCCCGCCAGCTCCCGAGGGACCTGGTACACTGCAAAACCGATG | + |
|
Preference number: 5 (lower is better) Translates to: REALARKKSRFKCTG*PASSRGTWYTAKPM Trigger: CATCGGTTTTGCAGTGTACCAGGTCCCTCGGGAGCTGGCGGGTCAGCCTGTGCACTTGAAGCGTGATTTCTTCCTGGCCAACGCTTCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGCTCATGCTGCCAGACTaGTCCAGGTCAAACTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CSEEGTRSWCSLEWHGGELMLPD*SRSNFR Trigger: CCGGAAGTTTGACCTGGACAAGTCTGGCAGCATGAG...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGGCGTGGCTTAGCTTCTTGTTAAGCTaGAAGCCTGCAGCCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: EGTRSWCSLEWHGGEAWLSFLLS*KPAASM Trigger: CATCGAGGCTGCAGGCTTCAAGCTTAACAAGAAGCT...AAGCCACGCCTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GGATGGGGAGGGCCTGAGCACCCTCGGGGCCAGGAAGTTCCTGGTGGGCACACATCTGTGTCCAGAAGTTaGAAAAACCGGAACATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GWGGPEHPRGQEVPGGHTSVSRS*KNRNMV Trigger: GACCATGTTCCGGTTTTTCAAACTTCTGGACACAGA...TGTGTGCCCACCAGGAACTTCCTGGCCCCGAGGGTGCTCAGGCCCTCCCCATCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGACAAGGGTGCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTCCCAAGCCCAGCTCCTaGTCCCGCTTCTTCTGTACT | + |
|
Preference number: 5 (lower is better) Translates to: QEDKGAFLPVLRKAPEAGPKPSS*SRFFCT Trigger: AGTACAGAAGAAGCGGGACAAGGAGCTGGGCTTGGG...ACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCTCCTGGCCCAGGTACTaGATGGCGTTTTCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGSWPRY*MAFSWR Trigger: CCGCCATGAAAACGCCATCAAGTACCTGGGCCAGGA...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGACAAGGGTGCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTAAGTCGCCTTCTTTGTaGGGCTCGAAGGTGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QEDKGAFLPVLRKAPEAGKSPSL*GSKVEG Trigger: GCCCTCCACCTTCGAGCCCAACAAAGAAGGCGACTT...ACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGAGACAGCACACAAAGTaGTCAAAGTCCACGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CSEEGTRSWCSLEWHGGERQHTK*SKSTAR Trigger: CCTGGCCGTGGACTTTGACAACTTTGTGTGCTGTCT...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACTGCGCCCGAGAAGCGTaGGCCAGGAAGAAATCACGC | + |
|
Preference number: 5 (lower is better) Translates to: TQARRGVVWFAEGSWLLHCAREA*ARKKSR Trigger: GCGTGATTTCTTCCTGGCCAACGCTTCTCGGGCGCA...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTAAGTCGCCTTCTTTGTaGGGCTCGAAGGTGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIKSPSL*GSKVEG Trigger: GCCCTCCACCTTCGAGCCCAACAAAGAAGGCGACTT...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTAGACCCAGCTTCCCGTaGCCATCTCGATCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIRPSFP*PSRSMR Trigger: CCTCATGGATCGAGATGGCAACGGGAAGCTGGGTCT...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS TCA 90 bp | CAGGCGGATACGGTTGCTGACTTCCCGAAGGTTGATGAAGTGCTCTaGCTGCGCCCGAGAAGCGTTGGCCAGGAAGAAATCACGCTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QADTVADFPKVDEVL*LRPRSVGQEEITLQ Trigger: TTGAAGCGTGATTTCTTCCTGGCCAACGCTTCTCGGGCGCAGTCAGAGCACTTCATCAACCTTCGGGAAGTCAGCAACCGTATCCGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS GCA 90 bp | CGGATACGGTTGCTGACTTCCCGAAGGTTGATGAAGTGCTCTGACTaGGCCCGAGAAGCGTTGGCCAGGAAGAAATCACGCTTCAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RIRLLTSRRLMKCSD*AREALARKKSRFKC Trigger: GCACTTGAAGCGTGATTTCTTCCTGGCCAACGCTTCTCGGGCGCAGTCAGAGCACTTCATCAACCTTCGGGAAGTCAGCAACCGTATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACTCCTGGCCCAGGTACTaGATGGCGTTTTCATGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TQARRGVVWFAEGSWLLHSWPRY*MAFSWR Trigger: CCGCCATGAAAACGCCATCAAGTACCTGGGCCAGGA...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACACCAGCTTCCCGTCCTaGGTGGGCAGCAAGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TQARRGVVWFAEGSWLLHTSFPS*VGSKSS Trigger: AGATGACTTGCTGCCCACCAAGGACGGGAAGCTGGT...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACTCCCCATCCTCCATCTaGACCCTCAGCTGCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TQARRGVVWFAEGSWLLHSPSSI*TLSCSR Trigger: ACGAGAGCAGCTGAGGGTCAAGATGGAGGATGGGGA...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTAGGAAGTCGCCTTCTTaGTTGGGCTCGAAGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIRKSPS*LGSKVE Trigger: CTCCACCTTCGAGCCCAACAAAGAAGGCGACTTCCT...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | CAGGAGGACAAGGGTGCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTTTCTCATCAGGGAGGTaGGCCTGGATCTGGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QEDKGAFLPVLRKAPEAGFSSGR*AWIWSS Trigger: AGATGACCAGATCCAGGCCAACCTCCCTGATGAGAA...ACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGCACCCTTGTCCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | TCCCTACCCCACCCCCAGTTCCTCCATAACCAGTACACTCATCCCTCAGGCATTTTCTCATCAGGGAGGTaGGCCTGGATCTGGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLPHPQFLHNQYTHPSGIFSSGR*AWIWSS Trigger: AGATGACCAGATCCAGGCCAACCTCCCTGATGAGAA...AATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAACTGGGGGTGGGGTAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
||
| CDS-3UTR CAA 90 bp | ACACAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACCTCATGCTGCCAGACTaGTCCAGGTCAAACTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TQARRGVVWFAEGSWLLHLMLPD*SRSNFR Trigger: CCGGAAGTTTGACCTGGACAAGTCTGGCAGCATGAG...GTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CAA 90 bp | TGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCACGGCGGGGAGTCTGTGTCCAGAAGTTaGAAAAACCGGAACATGGTC | + |
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Preference number: 5 (lower is better) Translates to: CSEEGTRSWCSLEWHGGESVSRS*KNRNMV Trigger: GACCATGTTCCGGTTTTTCAAACTTCTGGACACAGA...CTCCCCGCCGTGCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS GCA 90 bp | AGCCTGCAGCCTCGATGGCCATCCTCATCTCATAGGCACTCATGCTaGCAGACTTGTCCAGGTCAAACTTCCGGAAGATGGTCAGGTAAT | + |
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Preference number: 5 (lower is better) Translates to: SLQPRWPSSSHRHSC*QTCPGQTSGRWSGN Trigger: ATTACCTGACCATCTTCCGGAAGTTTGACCTGGACAAGTCTGGCAGCATGAGTGCCTATGAGATGAGGATGGCCATCGAGGCTGCAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CCA 90 bp | TCAATCTCCTCTTCAGAGAGAACTTTCTCATCAGGGAGGTTGGCCTaGATCTGGTCATCTAGTTCCTGGGTCCCAGCCTTCTTCTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: SISSSERTFSSGRLA*IWSSSSWVPAFFSE Trigger: CTCAGAGAAGAAGGCTGGGACCCAGGAACTAGATGACCAGATCCAGGCCAACCTCCCTGATGAGAAAGTTCTCTCTGAAGAGGAGATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CAA 90 bp | GCCTTCCTTCCTGTTCTGAGGAAGGCACCAGAAGCTGGTGTAGTCTGGAGTGGCTTGCAGATTTCCAGTTaGGTGAATTCACGGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: AFLPVLRKAPEAGVVWSGLQISS*VNSRMK Trigger: CTTCATCCGTGAATTCACCAAACTGGAAATCTGCAA...GCCACTCCAGACTACACCAGCTTCTGGTGCCTTCCTCAGAACAGGAAGGAAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTAGGAAGTCGCCTTCTTaGTTGGGCTCGAAGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSRKSPS*LGSKVE Trigger: CTCCACCTTCGAGCCCAACAAAGAAGGCGACTTCCT...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CAA 90 bp | CAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACAGAAGTTCATGCAGCTTCTaGTTAAGCTTGAAGCCTGCA | + |
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Preference number: 5 (lower is better) Translates to: QARRGVVWFAEGSWLLHRSSCSF*LSLKPA Trigger: TGCAGGCTTCAAGCTTAACAAGAAGCTGCATGAACT...TCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CAA 90 bp | CAGGCTAGGAGAGGTGTAGTTTGGTTTGCAGAGGGATCTTGGCTGCTGCACAGATTGCAGATTTCCAGTTaGGTGAATTCACGGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: QARRGVVWFAEGSWLLHRLQISS*VNSRMK Trigger: CTTCATCCGTGAATTCACCAAACTGGAAATCTGCAA...TCTGTGCAGCAGCCAAGATCCCTCTGCAAACCAAACTACACCTCTCCTAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTCTGACTTCCCGAAGGTaGATGAAGTGCTCTGACTGC | + |
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Preference number: 5 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSLTSRR*MKCSDC Trigger: GCAGTCAGAGCACTTCATCAACCTTCGGGAAGTCAG...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTATGGTCTGTAGCTCCTaGACGCTGATCTCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSMVCSS*TLISMS Trigger: TGACATGGAGATCAGCGTCAAGGAGCTACAGACCAT...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS-3UTR CAA 90 bp | TTCCTCCATAACCAGTACACTCATCCCTCAGGCATTCCCTTGAAAATGACCAGTAGCTTCTTGTTAAGCTaGAAGCCTGCAGCCTCGATG | + |
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Preference number: 5 (lower is better) Translates to: FLHNQYTHPSGIPLKMTSSFLLS*KPAASM Trigger: CATCGAGGCTGCAGGCTTCAAGCTTAACAAGAAGCT...ACTGGTCATTTTCAAGGGAATGCCTGAGGGATGAGTGTACTGGTTATGGAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS GCA 72 bp | TCCCGGCCAAAGCGACGCTCCCTGCGGCGGTGTTTCTaGATGAGGGCCAGCAAGAAGCTGCAGCCCGACTCC | + |
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Preference number: 6 (lower is better) Translates to: SRPKRRSLRRCF*MRASKKLQPDS Trigger: GGAGTCGGGCTGCAGCTTCTTGCTGGCCCTCATGCAGAAACACCGCCGCAGGGAGCGTCGCTTTGGCCGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS GCA 72 bp | AGGCTGACCCGCCAGCTCCCGAGGGACCTGGTACACTaGAAAACCGATGGTCTCCATGTCCCGGCCAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLTRQLPRDLVH*KTDGLHVPAKA Trigger: CGCTTTGGCCGGGACATGGAGACCATCGGTTTTGCAGTGTACCAGGTCCCTCGGGAGCTGGCGGGTCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CCA 72 bp | CCAGCTCCCGAGGGACCTGGTACACTGCAAAACCGATaGTCTCCATGTCCCGGCCAAAGCGACGCTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PAPEGPGTLQNR*SPCPGQSDAPC Trigger: GCAGGGAGCGTCGCTTTGGCCGGGACATGGAGACCATCGGTTTTGCAGTGTACCAGGTCCCTCGGGAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 90 bp | TACTCCCCGGGCGGCAGGCGGATACGGTTGCTGACTTCCCGAAGGTaGATGAAGTGCTCTGACTGCGCCCGAGAAGCGTTGGCCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YSPGGRRIRLLTSRR*MKCSDCAREALARK Trigger: CTTCCTGGCCAACGCTTCTCGGGCGCAGTCAGAGCACTTCATCAACCTTCGGGAAGTCAGCAACCGTATCCGCCTGCCGCCCGGGGAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS TCA 72 bp | CTCAGTGACCCCACCGGTAAAGTCCTCGAAGGCCTCTaGGGTGCAGCCTCCCGAAAGAGCCTCATAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LSDPTGKVLEGL*GAASRKSLIAA Trigger: GGCAGCTATGAGGCTCTTTCGGGAGGCTGCACCTCAGAGGCCTTCGAGGACTTTACCGGTGGGGTCACTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CCA 72 bp | TTAGGTTCACCCGCTGGCCCTGGTAAGTTACCTGCTTaGCGCCCGTCACAGAGTACGCATGGCCCCTCACCA | + |
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Preference number: 6 (lower is better) Translates to: LGSPAGPGKLPA*RPSQSTHGPSP Trigger: TGGTGAGGGGCCATGCGTACTCTGTGACGGGCGCCAAGCAGGTAACTTACCAGGGCCAGCGGGTGAACCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS TCA 72 bp | AGCCCAGCAAGGAGCCTCGTTCCAGGGCCTTTAGAATaGTCTGGTAGAGGTCGCTGGGGGCCTTCTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SPARSLVPGPLE*SGRGRWGPSAG Trigger: ACCTGCAGAAGGCCCCCAGCGACCTCTACCAGATCATTCTAAAGGCCCTGGAACGAGGCTCCTTGCTGGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS TCA 72 bp | TTGGCCAGGAAGAAATCACGCTTCAAGTGCACAGGCTaGCCCGCCAGCTCCCGAGGGACCTGGTACACTGCA | + |
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Preference number: 6 (lower is better) Translates to: LARKKSRFKCTG*PASSRGTWYTA Trigger: TGCAGTGTACCAGGTCCCTCGGGAGCTGGCGGGTCAGCCTGTGCACTTGAAGCGTGATTTCTTCCTGGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 90 bp | TTCCTTGAAGCCCAGGCTATGAGAAACCGGAGGGAAGGCCTCGTCTaGGAAGAGGACCCCACTCTGCAGGCATCTTGCCCGAAGCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: FLEAQAMRNRREGLV*EEDPTLQASCPKRF Trigger: GAAACGCTTCGGGCAAGATGCCTGCAGAGTGGGGTCCTCTTCCAAGACGAGGCCTTCCCTCCGGTTTCTCATAGCCTGGGCTTCAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 ENSMUST00000235138.2 ENSMUST00000237519.2 |
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| CDS GCA 72 bp | CCCACTCCCCGAACTGCCACAGCTGGAAATGAAAGATaGCAGCGTAGCCATCCTGAAAGCTCTGGCCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: PTPRTATAGNER*QRSHPESSGRR Trigger: CCTACGGCCAGAGCTTTCAGGATGGCTACGCTGGCATCTTTCATTTCCAGCTGTGGCAGTTCGGGGAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 ENSMUST00000236537.2 ENSMUST00000237519.2 |
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| CDS GCA 72 bp | GAAGCTGCAGCCCGACTCCCGGTTGTCATAGTCGTCTaGGTCATCCACCTCCTCCAACCGGATCTTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: EAAARLPVVIVV*VIHLLQPDLEL Trigger: CAGTTCAAGATCCGGTTGGAGGAGGTGGATGACGCAGACGACTATGACAACCGGGAGTCGGGCTGCAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS TCA 72 bp | TTGCCCGAAGCGTTTCATAATCCTGGCCCAGGTACTTaGTGGCGTTTTCATGGCGGCCCAAGCCCAGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LPEAFHNPGPGT*WRFHGGPSPAP Trigger: AGGAGCTGGGCTTGGGCCGCCATGAAAACGCCATCAAGTACCTGGGCCAGGATTATGAAACGCTTCGGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 ENSMUST00000235138.2 ENSMUST00000237519.2 |
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| CDS TCA 72 bp | ACGGTTGCTGACTTCCCGAAGGTTGATGAAGTGCTCTaGCTGCGCCCGAGAAGCGTTGGCCAGGAAGAAATC | + |
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Preference number: 6 (lower is better) Translates to: TVADFPKVDEVL*LRPRSVGQEEI Trigger: GATTTCTTCCTGGCCAACGCTTCTCGGGCGCAGTCAGAGCACTTCATCAACCTTCGGGAAGTCAGCAACCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS GCA 72 bp | CTCGTCTTGGAAGAGGACCCCACTCTGCAGGCATCTTaGCCGAAGCGTTTCATAATCCTGGCCCAGGTACTT | + |
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Preference number: 6 (lower is better) Translates to: LVLEEDPTLQAS*PKRFIILAQVL Trigger: AAGTACCTGGGCCAGGATTATGAAACGCTTCGGGCAAGATGCCTGCAGAGTGGGGTCCTCTTCCAAGACGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 ENSMUST00000235138.2 ENSMUST00000237519.2 |
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| CDS GCA 72 bp | TTGCTGACTTCCCGAAGGTTGATGAAGTGCTCTGACTaGGCCCGAGAAGCGTTGGCCAGGAAGAAATCACGC | + |
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Preference number: 6 (lower is better) Translates to: LLTSRRLMKCSD*AREALARKKSR Trigger: GCGTGATTTCTTCCTGGCCAACGCTTCTCGGGCGCAGTCAGAGCACTTCATCAACCTTCGGGAAGTCAGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS GCA 72 bp | CCTCGATGGCCATCCTCATCTCATAGGCACTCATGCTaGCAGACTTGTCCAGGTCAAACTTCCGGAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: PRWPSSSHRHSC*QTCPGQTSGRW Trigger: CCATCTTCCGGAAGTTTGACCTGGACAAGTCTGGCAGCATGAGTGCCTATGAGATGAGGATGGCCATCGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CCA 72 bp | GAGAGAACTTTCTCATCAGGGAGGTTGGCCTGGATCTaGTCATCTAGTTCCTGGGTCCCAGCCTTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ERTFSSGRLAWI*SSSSWVPAFFS Trigger: AGAGAAGAAGGCTGGGACCCAGGAACTAGATGACCAGATCCAGGCCAACCTCCCTGATGAGAAAGTTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 72 bp | CGGAGGGTCCTGCTCTTAAGGGCGTCCGGTGTAAGGTaGCAGATTTCCAGTTTGGTGAATTCACGGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: RRVLLLRASGVR*QISSLVNSRMK Trigger: CTTCATCCGTGAATTCACCAAACTGGAAATCTGCAACCTTACACCGGACGCCCTTAAGAGCAGGACCCTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 90 bp | CGGCACGACTCCAGGCTGAAGCCATTAGTGCGCAGGTCTTTGTGTTaGCTAATGATCCTGTTCAAGATGGTCTGTAGCTCCTTGACGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RHDSRLKPLVRRSLC*LMILFKMVCSSLTL Trigger: CAGCGTCAAGGAGCTACAGACCATCTTGAACAGGATCATTAGCAAACACAAAGACCTGCGCACTAATGGCTTCAGCCTGGAGTCGTGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 90 bp | GTCCTGCTCTTAAGGGCGTCCGGTGTAAGGTTGCAGATTTCCAGTTaGGTGAATTCACGGATGAAGTCTCGGAACGACATCCAGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: VLLLRASGVRLQISS*VNSRMKSRNDIQNS Trigger: GGAGTTCTGGATGTCGTTCCGAGACTTCATCCGTGAATTCACCAAACTGGAAATCTGCAACCTTACACCGGACGCCCTTAAGAGCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 90 bp | TTCCAATTCCGGAGGGTCCTGCTCTTAAGGGCGTCCGGTGTAAGGTaGCAGATTTCCAGTTTGGTGAATTCACGGATGAAGTCTCGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: FQFRRVLLLRASGVR*QISSLVNSRMKSRN Trigger: GTTCCGAGACTTCATCCGTGAATTCACCAAACTGGAAATCTGCAACCTTACACCGGACGCCCTTAAGAGCAGGACCCTCCGGAATTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 90 bp | ATGCTGCGGCACGACTCCAGGCTGAAGCCATTAGTGCGCAGGTCTTaGTGTTTGCTAATGATCCTGTTCAAGATGGTCTGTAGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: MLRHDSRLKPLVRRS*CLLMILFKMVCSSL Trigger: CAAGGAGCTACAGACCATCTTGAACAGGATCATTAGCAAACACAAAGACCTGCGCACTAATGGCTTCAGCCTGGAGTCGTGCCGCAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS TCA 72 bp | AGGTCACAACACCATCCAGGTCTGTGTCCAGAAGTTTaGAAAACCGGAACATGGTCTCCAGCCGCACAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RSQHHPGLCPEV*KTGTWSPAAQD Trigger: GTCTTGTGCGGCTGGAGACCATGTTCCGGTTTTTCAAACTTCTGGACACAGACCTGGATGGTGTTGTGACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 72 bp | CGGGTGATTATGAGTTCATGCAGCTTCTTGTTAAGCTaGAAGCCTGCAGCCTCGATGGCCATCCTCATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RVIMSSCSFLLS*KPAASMAILIS Trigger: TGAGATGAGGATGGCCATCGAGGCTGCAGGCTTCAAGCTTAACAAGAAGCTGCATGAACTCATAATCACCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 72 bp | TTAAGGGCGTCCGGTGTAAGGTTGCAGATTTCCAGTTaGGTGAATTCACGGATGAAGTCTCGGAACGACATC | + |
|
Preference number: 6 (lower is better) Translates to: LRASGVRLQISS*VNSRMKSRNDI Trigger: GATGTCGTTCCGAGACTTCATCCGTGAATTCACCAAACTGGAAATCTGCAACCTTACACCGGACGCCCTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 72 bp | TCCTTGACGCTGATCTCCATGTCATCCCCTGCCAACTaGCTGAACAAGGTCTTGAAGTTGTCATCAATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SLTLISMSSPAN*LNKVLKLSSIS Trigger: GGAGATTGATGACAACTTCAAGACCTTGTTCAGCAAGTTGGCAGGGGATGACATGGAGATCAGCGTCAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 72 bp | TTGCTAATGATCCTGTTCAAGATGGTCTGTAGCTCCTaGACGCTGATCTCCATGTCATCCCCTGCCAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLMILFKMVCSS*TLISMSSPANL Trigger: CAAGTTGGCAGGGGATGACATGGAGATCAGCGTCAAGGAGCTACAGACCATCTTGAACAGGATCATTAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 72 bp | TCCAGGCTGAAGCCATTAGTGCGCAGGTCTTTGTGTTaGCTAATGATCCTGTTCAAGATGGTCTGTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLKPLVRRSLC*LMILFKMVCSS Trigger: GGAGCTACAGACCATCTTGAACAGGATCATTAGCAAACACAAAGACCTGCGCACTAATGGCTTCAGCCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 72 bp | CACGACTCCAGGCTGAAGCCATTAGTGCGCAGGTCTTaGTGTTTGCTAATGATCCTGTTCAAGATGGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: HDSRLKPLVRRS*CLLMILFKMVC Trigger: ACAGACCATCTTGAACAGGATCATTAGCAAACACAAAGACCTGCGCACTAATGGCTTCAGCCTGGAGTCGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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| CDS CAA 72 bp | TCATCCCCTGCCAACTTGCTGAACAAGGTCTTGAAGTaGTCATCAATCTCCTCTTCAGAGAGAACTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSPANLLNKVLK*SSISSSERTFS Trigger: TGAGAAAGTTCTCTCTGAAGAGGAGATTGATGACAACTTCAAGACCTTGTTCAGCAAGTTGGCAGGGGATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025891.11 ENSMUST00000164843.10 |
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