Pregenerated sensors for CAPG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056737Ensembl transcript IDs: ENSMUST00000071044.13, ENSMUST00000114071.8, ENSMUST00000114072.8, ENSMUST00000126101.3, ENSMUST00000126124.8, ENSMUST00000134809.8, ENSMUST00000155188.8, ENSMUST00000155705.8
Found 26 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACCTCACGGTGCTGCACTGGCCGCTCCCCCAGCAGGGTGTTGAGATaGACAGCCAGCACTGCACAGGCCCCCTGCTCATCCCGGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: TSRCCTGRSPSRVLR*TASTAQAPCSSRED Trigger: GTCCTCCCGGGATGAGCAGGGGGCCTGTGCAGTGCTGGCTGTGCATCTCAACACCCTGCTGGGGGAGCGGCCAGTGCAGCACCGTGAGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 ENSMUST00000155705.8 |
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| CDS TCA 90 bp | CTTGAACCTCACGGTGCTGCACTGGCCGCTCCCCCAGCAGGGTGTTaGGATGCACAGCCAGCACTGCACAGGCCCCCTGCTCATCCCGGG | + |
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Preference number: 5 (lower is better) Translates to: LEPHGAALAAPPAGC*DAQPALHRPPAHPG Trigger: CCCGGGATGAGCAGGGGGCCTGTGCAGTGCTGGCTGTGCATCTCAACACCCTGCTGGGGGAGCGGCCAGTGCAGCACCGTGAGGTTCAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 ENSMUST00000155705.8 |
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| CDS GCA 90 bp | CCCAGCAGGGTGTTGAGATGCACAGCCAGCACTGCACAGGCCCCCTaGTCATCCCGGGAGGACTGCTGGCCTATCCACAGGTGCAGATGG | + |
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Preference number: 5 (lower is better) Translates to: PSRVLRCTASTAQAP*SSREDCWPIHRCRW Trigger: CCATCTGCACCTGTGGATAGGCCAGCAGTCCTCCCGGGATGAGCAGGGGGCCTGTGCAGTGCTGGCTGTGCATCTCAACACCCTGCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000134809.8 ENSMUST00000155188.8 ENSMUST00000155705.8 |
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| CDS GCA 90 bp | CTTCCTGATGGCTGCTGGGGTGGCGCCCGAGGTTGTCTTGTGAAATaGCGACTCTACACCACCTTCCCGGTACTTGAGGCCTCGTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: LPDGCWGGARGCLVK*RLYTTFPVLEASWE Trigger: TTCCCACGAGGCCTCAAGTACCGGGAAGGTGGTGTAGAGTCGGCATTTCACAAGACAACCTCGGGCGCCACCCCAGCAGCCATCAGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 |
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| CDS CCA 90 bp | CATGAAGAGGTCAGACTCATTGCCTTGAACCTCACGGTGCTGCACTaGCCGCTCCCCCAGCAGGGTGTTGAGATGCACAGCCAGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: HEEVRLIALNLTVLH*PLPQQGVEMHSQHC Trigger: GCAGTGCTGGCTGTGCATCTCAACACCCTGCTGGGGGAGCGGCCAGTGCAGCACCGTGAGGTTCAAGGCAATGAGTCTGACCTCTTCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 |
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| CDS CCA 90 bp | GTGGCATCAGAGACCTTATACAGGGCTGCAGCCTGGGCGTTGGTCTaGTCAGCTGTAATGTCTTCCTCGGGGTTACCCTCCTTCAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: VASETLYRAAAWALV*SAVMSSSGLPSFRA Trigger: TGCTCTGAAGGAGGGTAACCCCGAGGAAGACATTACAGCTGACCAGACCAACGCCCAGGCTGCAGCCCTGTATAAGGTCTCTGATGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS GCA 90 bp | CTGGGCCATTGTGAAGCACTAGGTAGGAGTCCCCAGAGAAAAAGATaGCATGGCTCTCTCGTGCTATGGGCACCGGCTTCAGCTTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: LGHCEALGRSPQRKR*HGSLVLWAPASASP Trigger: TGGAGAAGCTGAAGCCGGTGCCCATAGCACGAGAGAGCCATGGCATCTTTTTCTCTGGGGACTCCTACCTAGTGCTTCACAATGGCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000134809.8 ENSMUST00000155188.8 ENSMUST00000155705.8 |
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| CDS TCA 90 bp | GCAGTATCTCCACCTGAGTGTTTGGGGAATACCTCATTCGAGAGATaGAGCCATCAGCCACTTGGAGGGCTGCCTGCCGCTCTTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: AVSPPECLGNTSFER*SHQPLGGLPAALSH Trigger: ATGAGAAAGAGCGGCAGGCAGCCCTCCAAGTGGCTGATGGCTTCATCTCTCGAATGAGGTATTCCCCAAACACTCAGGTGGAGATACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS CCA 90 bp | CTGGAATTAGCAGTTCAGAGGCAAAAGGGCTGGAGTCAGCCACCTTaGTCAGATTCATCTGTCCAGTGGCATCAGAGACCTTATACAGGG | + |
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Preference number: 5 (lower is better) Translates to: LELAVQRQKGWSQPP*SDSSVQWHQRPYTG Trigger: CCCTGTATAAGGTCTCTGATGCCACTGGACAGATGAATCTGACCAAGGTGGCTGACTCCAGCCCTTTTGCCTCTGAACTGCTAATTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS CCA 90 bp | GAACAAAGCAGTCATCTGGAATTAGCAGTTCAGAGGCAAAAGGGCTaGAGTCAGCCACCTTGGTCAGATTCATCTGTCCAGTGGCATCAG | + |
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Preference number: 5 (lower is better) Translates to: EQSSHLELAVQRQKG*SQPPWSDSSVQWHQ Trigger: CTGATGCCACTGGACAGATGAATCTGACCAAGGTGGCTGACTCCAGCCCTTTTGCCTCTGAACTGCTAATTCCAGATGACTGCTTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS TCA 72 bp | CACGGTGCTGCACTGGCCGCTCCCCCAGCAGGGTGTTaGGATGCACAGCCAGCACTGCACAGGCCCCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: HGAALAAPPAGC*DAQPALHRPPA Trigger: AGCAGGGGGCCTGTGCAGTGCTGGCTGTGCATCTCAACACCCTGCTGGGGGAGCGGCCAGTGCAGCACCGTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 7 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 ENSMUST00000155705.8 |
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| CDS TCA 72 bp | TTTCCACCTGGGCCTTGCCCTGCCGCTCGCTGTCCCTaGTGGCCAGGGCCAGGTCCCTCGCCTTGTTGCGCT | + |
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Preference number: 6 (lower is better) Translates to: FPPGPCPAARCP*WPGPGPSPCCA Trigger: AGCGCAACAAGGCGAGGGACCTGGCCCTGGCCATCAGGGACAGCGAGCGGCAGGGCAAGGCCCAGGTGGAAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 |
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| CDS GCA 72 bp | GTGTTGAGATGCACAGCCAGCACTGCACAGGCCCCCTaGTCATCCCGGGAGGACTGCTGGCCTATCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: VLRCTASTAQAP*SSREDCWPIHR Trigger: CCTGTGGATAGGCCAGCAGTCCTCCCGGGATGAGCAGGGGGCCTGTGCAGTGCTGGCTGTGCATCTCAACAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000134809.8 ENSMUST00000155188.8 ENSMUST00000155705.8 |
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| CDS GCA 72 bp | GGCTGCTGGGGTGGCGCCCGAGGTTGTCTTGTGAAATaGCGACTCTACACCACCTTCCCGGTACTTGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GCWGGARGCLVK*RLYTTFPVLEA Trigger: GGCCTCAAGTACCGGGAAGGTGGTGTAGAGTCGGCATTTCACAAGACAACCTCGGGCGCCACCCCAGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 |
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| CDS TCA 72 bp | CTGATGGCTGCTGGGGTGGCGCCCGAGGTTGTCTTGTaGAATGCCGACTCTACACCACCTTCCCGGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: LMAAGVAPEVVL*NADSTPPSRYL Trigger: CAAGTACCGGGAAGGTGGTGTAGAGTCGGCATTTCACAAGACAACCTCGGGCGCCACCCCAGCAGCCATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 |
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| CDS CCA 72 bp | CTTCCCCTTAACCTGGTAGAGCTTCCTGATGGCTGCTaGGGTGGCGCCCGAGGTTGTCTTGTGAAATGCCGA | + |
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Preference number: 6 (lower is better) Translates to: LPLNLVELPDGC*GGARGCLVKCR Trigger: TCGGCATTTCACAAGACAACCTCGGGCGCCACCCCAGCAGCCATCAGGAAGCTCTACCAGGTTAAGGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 |
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| CDS CCA 72 bp | AGCAGGCTTGGGGCCCAGAACCTGAATCATCTCGGCTaGCTCCTCTCCATCAGTGATGATTTCCACCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SRLGAQNLNHLG*LLSISDDFHLG Trigger: GCCCAGGTGGAAATCATCACTGATGGAGAGGAGCCAGCCGAGATGATTCAGGTTCTGGGCCCCAAGCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 |
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| CDS CAA 90 bp | TGTCCAGTGGCATCAGAGACCTTATACAGGGCTGCAGCCTGGGCGTaGGTCTGGTCAGCTGTAATGTCTTCCTCGGGGTTACCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: CPVASETLYRAAAWA*VWSAVMSSSGLPSF Trigger: GAAGGAGGGTAACCCCGAGGAAGACATTACAGCTGACCAGACCAACGCCCAGGCTGCAGCCCTGTATAAGGTCTCTGATGCCACTGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS TCA 72 bp | CCACCTGAGTGTTTGGGGAATACCTCATTCGAGAGATaGAGCCATCAGCCACTTGGAGGGCTGCCTGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: PPECLGNTSFER*SHQPLGGLPAA Trigger: AGCGGCAGGCAGCCCTCCAAGTGGCTGATGGCTTCATCTCTCGAATGAGGTATTCCCCAAACACTCAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS GCA 72 bp | CTTCTTCCCCTTAACCTGGTAGAGCTTCCTGATGGCTaGTGGGGTGGCGCCCGAGGTTGTCTTGTGAAATGC | + |
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Preference number: 6 (lower is better) Translates to: LLPLNLVELPDG*WGGARGCLVKC Trigger: GCATTTCACAAGACAACCTCGGGCGCCACCCCAGCAGCCATCAGGAAGCTCTACCAGGTTAAGGGGAAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 |
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| CDS CCA 72 bp | CCCCAGAGAAAAAGATGCCATGGCTCTCTCGTGCTATaGGCACCGGCTTCAGCTTCTCCACACGCCATATGT | + |
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Preference number: 6 (lower is better) Translates to: PQRKRCHGSLVL*APASASPHAIC Trigger: ACATATGGCGTGTGGAGAAGCTGAAGCCGGTGCCCATAGCACGAGAGAGCCATGGCATCTTTTTCTCTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000134809.8 ENSMUST00000155188.8 ENSMUST00000155705.8 |
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| CDS CCA 72 bp | CGACTCTACACCACCTTCCCGGTACTTGAGGCCTCGTaGGAAGTAGCTCATGAAGAGGTCAGACTCATTGCC | + |
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Preference number: 6 (lower is better) Translates to: RLYTTFPVLEAS*EVAHEEVRLIA Trigger: GGCAATGAGTCTGACCTCTTCATGAGCTACTTCCCACGAGGCCTCAAGTACCGGGAAGGTGGTGTAGAGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 ENSMUST00000126101.3 ENSMUST00000126124.8 ENSMUST00000155188.8 |
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| CDS CCA 72 bp | TGGAGTCAGCCACCTTGGTCAGATTCATCTGTCCAGTaGCATCAGAGACCTTATACAGGGCTGCAGCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: WSQPPWSDSSVQ*HQRPYTGLQPG Trigger: CCCAGGCTGCAGCCCTGTATAAGGTCTCTGATGCCACTGGACAGATGAATCTGACCAAGGTGGCTGACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS TCA 72 bp | ATGGGACTCTCTCGGCCCTGGGGCAGTATCTCCACCTaGGTGTTTGGGGAATACCTCATTCGAGAGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: MGLSRPWGSIST*VFGEYLIREMK Trigger: CTTCATCTCTCGAATGAGGTATTCCCCAAACACTCAGGTGGAGATACTGCCCCAGGGCCGAGAGAGTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS CCA 72 bp | GCAGTTCAGAGGCAAAAGGGCTGGAGTCAGCCACCTTaGTCAGATTCATCTGTCCAGTGGCATCAGAGACCT | + |
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Preference number: 6 (lower is better) Translates to: AVQRQKGWSQPP*SDSSVQWHQRP Trigger: AGGTCTCTGATGCCACTGGACAGATGAATCTGACCAAGGTGGCTGACTCCAGCCCTTTTGCCTCTGAACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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| CDS CCA 72 bp | AGTCATCTGGAATTAGCAGTTCAGAGGCAAAAGGGCTaGAGTCAGCCACCTTGGTCAGATTCATCTGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SHLELAVQRQKG*SQPPWSDSSVQ Trigger: CTGGACAGATGAATCTGACCAAGGTGGCTGACTCCAGCCCTTTTGCCTCTGAACTGCTAATTCCAGATGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071044.13 ENSMUST00000114071.8 ENSMUST00000114072.8 |
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