Pregenerated sensors for CAP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021373Ensembl transcript IDs: ENSMUST00000021802.16, ENSMUST00000119341.2, ENSMUST00000126687.2, ENSMUST00000225824.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTCAGAGGACGTCTTGTGTAGGTCACTTCTCTCCTTCCACCACGTaGTTCCTGGAGATCACACTCAAGTTGTCAGGCTCGGCATTAAGT | + |
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Preference number: 1 (lower is better) Translates to: GQRTSCVGHFSPSTT*FLEITLKLSGSALS Trigger: ACTTAATGCCGAGCCTGACAACTTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAGAAGTGACCTACACAAGACGTCCTCTGACC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR TCA 90 bp | ACTGATTCCAGAAGCAATAGTCAGGCTCTTGGGCATTTTTGTCTTTaGGGCTGGTTAGCACTGGTTAGCCTGGCCAGTGGAAAAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: TDSRSNSQALGHFCL*GWLALVSLASGKGT Trigger: AGTCCCTTTTCCACTGGCCAGGCTAACCAGTGCTAACCAGCCTCAAAGACAAAAATGCCCAAGAGCCTGACTATTGCTTCTGGAATCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR GCA 90 bp | ATTAAAGTACAACTGAATGTGTATGTGCGTGATCGAGTGCGCAGGTaGACCACATGCATGCAGGTACCCAGGAGGATGTTAGATTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: IKVQLNVYVRDRVRR*TTCMQVPRRMLDSL Trigger: CAAGGAATCTAACATCCTCCTGGGTACCTGCATGCATGTGGTGCACCTGCGCACTCGATCACGCACATACACATTCAGTTGTACTTTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR TCA 90 bp | TCAAAACTGCAACGCAAAGGCCGAGCTATCCTTCAAACCAGACCATaGGGTATTACAAAGCAAAAACTGAGGACTGAGTCCCTACCACAC | + |
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Preference number: 1 (lower is better) Translates to: SKLQRKGRAILQTRP*GITKQKLRTESLPH Trigger: GTGTGGTAGGGACTCAGTCCTCAGTTTTTGCTTTGTAATACCTCATGGTCTGGTTTGAAGGATAGCTCGGCCTTTGCGTTGCAGTTTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR CCA 90 bp | AAGGAAGAAATAGGCAGGGCTTTTCCTTATCAGTTACGGAGTTGGTaGTGTGATGGGAACAGAATTCTTTTCCCTTTAACTGCCGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: KEEIGRAFPYQLRSW*CDGNRILFPLTAVF Trigger: AAACACGGCAGTTAAAGGGAAAAGAATTCTGTTCCCATCACACCACCAACTCCGTAACTGATAAGGAAAAGCCCTGCCTATTTCTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR-3UTR TCA 90 bp | GGTCCCCATCTCAGCCCCAGGCAGGTAAGTGATTTCTGCTTCAGTTGTGCCCTGGGCACTCTCTTGGTTTaGGCACTCAGAAATTCACTA | + |
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Preference number: 2 (lower is better) Translates to: GPHLSPRQVSDFCFSCALGTLLV*ALRNSL Trigger: TAGTGAATTTCTGAGTGCTCAAACCAAGAGAGTGCC...CAGGGCACAACTGAAGCAGAAATCACTTACCTGCCTGGGGCTGAGATGGGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126687.2 |
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| 3UTR CAA 90 bp | CACTTCTCTCCTTCCACCACGTGGTTCCTGGAGATCACACTCAAGTaGTCAGGCTCGGCATTAAGTACCTCCAATAGTGTCTCACTTTGT | + |
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Preference number: 2 (lower is better) Translates to: HFSPSTTWFLEITLK*SGSALSTSNSVSLC Trigger: ACAAAGTGAGACACTATTGGAGGTACTTAATGCCGAGCCTGACAACTTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAGAAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR CAA 90 bp | TGCATTCATGATGTGATGATGTGTATGTACAGGTCAGAGGACGTCTaGTGTAGGTCACTTCTCTCCTTCCACCACGTGGTTCCTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: CIHDVMMCMYRSEDV*CRSLLSFHHVVPGD Trigger: ATCTCCAGGAACCACGTGGTGGAAGGAGAGAAGTGACCTACACAAGACGTCCTCTGACCTGTACATACACATCATCACATCATGAATGCA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR-3UTR TCA 90 bp | GGAAGTCTGTGTACTATCAAGACTAGAAAACCCAACCAGAGCCAAACAACTGATGCAAAAACTGAGGACTaGGTCCCTACCACACCCCAC | + |
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Preference number: 2 (lower is better) Translates to: GSLCTIKTRKPNQSQTTDAKTED*VPTTPH Trigger: GTGGGGTGTGGTAGGGACTCAGTCCTCAGTTTTTGC...ATCAGTTGTTTGGCTCTGGTTGGGTTTTCTAGTCTTGATAGTACACAGACTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTGTGTAGGTCACTTCTCTCCTTCCACCACGTGGTTCCTGGAGATCACACTCTTAGAACTTTTAAAGTaGCTCACGAGAAAGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: SCVGHFSPSTTWFLEITLLELLK*LTRKME Trigger: CTCCATCTTTCTCGTGAGTCACTTTAAAAGTTCTAA...GAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAGAAGTGACCTACACAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTAGGTCACTTCTCTCCTTCCACCACGTGGTTCCTGGAGATCACACTCAAGGTTGTCTGATACTATaGGTGACTTCAAAACTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: LCRSLLSFHHVVPGDHTQGCLIL*VTSKLQ Trigger: TTGCAGTTTTGAAGTCACCCATAGTATCAGACAACC...TTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAGAAGTGACCTACACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR-3UTR TCA 90 bp | GGCCGAGCTCCTAACTGCTGCCATGTCTCCAGCTCCATTTTGACTTTTATTTTTAAGCTATTAGAAAACTaGAAAAATGATAGCCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: GRAPNCCHVSSSILTFIFKLLEN*KNDSQR Trigger: CCGCTGGCTATCATTTTTTCAGTTTTCTAATAGCTT...AAAAATAAAAGTCAAAATGGAGCTGGAGACATGGCAGCAGTTAGGAGCTCGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR-3UTR GCA 90 bp | GGAAGTCTGTGTACTATCAAGACTAGAAAACCCAACCAGAGCCAAACAACTGATACGCCCATAAAAGCCTaGCAGAAAAGATACTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: GSLCTIKTRKPNQSQTTDTPIKA*QKRYCF Trigger: AAAACAGTATCTTTTCTGGCAGGCTTTTATGGGCGT...ATCAGTTGTTTGGCTCTGGTTGGGTTTTCTAGTCTTGATAGTACACAGACTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR-3UTR CCA 90 bp | ATTAAACTGAAAGGAAGAAATAGGCAGGGCTTTTCCTTATCAGTTACGGAGTTGAGATACTGTTTTCCATaGCACAGAACTGCAGGATTC | + |
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Preference number: 2 (lower is better) Translates to: IKLKGRNRQGFSLSVTELRYCFP*HRTAGF Trigger: GAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCT...CAACTCCGTAACTGATAAGGAAAAGCCCTGCCTATTTCTTCCTTTCAGTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR GCA 72 bp | CACAGGACCCAAAAAGCTGCAGAGTTCTCGGCCACGTaGAGAGAAGAGACACGAAGAGTGTTGTTGCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: HRTQKAAEFSAT*REETRRVLLLA Trigger: GGCAAGCAACAACACTCTTCGTGTCTCTTCTCTGCACGTGGCCGAGAACTCTGCAGCTTTTTGGGTCCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR CCA 72 bp | ATGAGCTGTCAGGTGGGTGATGGACTTGAACATGGGTaGGTTCTCTACAAGAACGGCCGAGCTCCTAACTGC | + |
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Preference number: 3 (lower is better) Translates to: MSCQVGDGLEHG*VLYKNGRAPNC Trigger: GCAGTTAGGAGCTCGGCCGTTCTTGTAGAGAACCCACCCATGTTCAAGTCCATCACCCACCTGACAGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR GCA 72 bp | CAACTGAATGTGTATGTGCGTGATCGAGTGCGCAGGTaGACCACATGCATGCAGGTACCCAGGAGGATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: QLNVYVRDRVRR*TTCMQVPRRML Trigger: TAACATCCTCCTGGGTACCTGCATGCATGTGGTGCACCTGCGCACTCGATCACGCACATACACATTCAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR CCA 72 bp | ACGTCTTGTGTAGGTCACTTCTCTCCTTCCACCACGTaGTTCCTGGAGATCACACTCAAGTTGTCAGGCTCG | + |
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Preference number: 3 (lower is better) Translates to: TSCVGHFSPSTT*FLEITLKLSGS Trigger: CGAGCCTGACAACTTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAGAAGTGACCTACACAAGACGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR-3UTR CAA 90 bp | GCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACGCTCCTATTAGCTGCTaGCTTCTGTTCGCTAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: ARKDTVFHGTELQDSDTDAPISC*LLFARG Trigger: TCCTCTAGCGAACAGAAGCAAGCAGCTAATAGGAGC...GTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| 3UTR GCA 72 bp | CGGCCACGTGCAGAGAAGAGACACGAAGAGTGTTGTTaGTTGCCTGGAAGTCTGTGTACTATCAAGACTAGA | + |
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Preference number: 3 (lower is better) Translates to: RPRAEKRHEECC*LPGSLCTIKTR Trigger: TCTAGTCTTGATAGTACACAGACTTCCAGGCAAGCAACAACACTCTTCGTGTCTCTTCTCTGCACGTGGCCG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR GCA 72 bp | GGGTGGGTTCTCTACAAGAACGGCCGAGCTCCTAACTaGTGCCATGTCTCCAGCTCCATTTTGACTTTTATT | + |
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Preference number: 3 (lower is better) Translates to: GWVLYKNGRAPN*CHVSSSILTFI Trigger: AATAAAAGTCAAAATGGAGCTGGAGACATGGCAGCAGTTAGGAGCTCGGCCGTTCTTGTAGAGAACCCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR-3UTR CAA 90 bp | TTGTGTAGGTCACTTCTCTCCTTCCACCACGTGGTTCCTGGAGATCACACTCAAGAAGAGTGTTGTTGCTaGCCTGGAAGTCTGTGTACT | + |
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Preference number: 3 (lower is better) Translates to: LCRSLLSFHHVVPGDHTQEECCC*PGSLCT Trigger: AGTACACAGACTTCCAGGCAAGCAACAACACTCTTC...TTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAGAAGTGACCTACACAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR GCA 72 bp | CCACCCCTCCCTGCCACCACCCTTTGTCTTAGGATATaGAGGCAAATTAGAACTTTTAAAGTGACTCACGAG | + |
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Preference number: 3 (lower is better) Translates to: PPLPATTLCLRI*RQIRTFKVTHE Trigger: CTCGTGAGTCACTTTAAAAGTTCTAATTTGCCTGCATATCCTAAGACAAAGGGTGGTGGCAGGGAGGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR TCA 72 bp | CAACGCAAAGGCCGAGCTATCCTTCAAACCAGACCATaGGGTATTACAAAGCAAAAACTGAGGACTGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: QRKGRAILQTRP*GITKQKLRTES Trigger: GGACTCAGTCCTCAGTTTTTGCTTTGTAATACCTCATGGTCTGGTTTGAAGGATAGCTCGGCCTTTGCGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGTCTGTGTACTATCAAGACTAGAAAACCCAACCAGAGCCAAACAACTGATGGCTCTTGGGCATTTTaGTCTTTGAGGCTGGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: GSLCTIKTRKPNQSQTTDGSWAF*SLRLVS Trigger: GCTAACCAGCCTCAAAGACAAAAATGCCCAAGAGCC...ATCAGTTGTTTGGCTCTGGTTGGGTTTTCTAGTCTTGATAGTACACAGACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR GCA 72 bp | TGGGTTCTCTACAAGAACGGCCGAGCTCCTAACTGCTaGCATGTCTCCAGCTCCATTTTGACTTTTATTTTT | + |
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Preference number: 3 (lower is better) Translates to: WVLYKNGRAPNC*HVSSSILTFIF Trigger: AAAAATAAAAGTCAAAATGGAGCTGGAGACATGGCAGCAGTTAGGAGCTCGGCCGTTCTTGTAGAGAACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| 3UTR CCA 72 bp | ATAGGCAGGGCTTTTCCTTATCAGTTACGGAGTTGGTaGTGTGATGGGAACAGAATTCTTTTCCCTTTAACT | + |
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Preference number: 3 (lower is better) Translates to: IGRAFPYQLRSW*CDGNRILFPLT Trigger: AGTTAAAGGGAAAAGAATTCTGTTCCCATCACACCACCAACTCCGTAACTGATAAGGAAAAGCCCTGCCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR CCA 72 bp | GAAATAGGCAGGGCTTTTCCTTATCAGTTACGGAGTTaGTGGTGTGATGGGAACAGAATTCTTTTCCCTTTA | + |
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Preference number: 3 (lower is better) Translates to: EIGRAFPYQLRS*WCDGNRILFPL Trigger: TAAAGGGAAAAGAATTCTGTTCCCATCACACCACCAACTCCGTAACTGATAAGGAAAAGCCCTGCCTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| 3UTR TCA 72 bp | GTCTTAGGATATGCAGGCAAATTAGAACTTTTAAAGTaGCTCACGAGAAAGATGGAGTTAGGATTTCTTTTG | + |
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Preference number: 3 (lower is better) Translates to: VLGYAGKLELLK*LTRKMELGFLL Trigger: CAAAAGAAATCCTAACTCCATCTTTCTCGTGAGTCACTTTAAAAGTTCTAATTTGCCTGCATATCCTAAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR TCA 90 bp | CCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTTGGTGTGGTGTTCCCTaGTGTAGGCTTGCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: PWHRTAGFGHGHGRRGYGWCGVP*CRLAAR Trigger: GCGAGCTGCAAGCCTACATCAGGGAACACCACACCA...ACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | ACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTAGGTGGTGGTGGAGGTaGTGGCGGGAGACCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: TELQDSDTDTGVGAMVKSRWWWR*WRETRP Trigger: GGGCCTGGTCTCCCGCCACCACCTCCACCACCACCT...AGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR TCA 90 bp | CATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAGTGCCACACCTCCATTaGCACCATTCACTTCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: HGTELQDSDTDTGVGAMVVPHLH*HHSLPR Trigger: GCGGGGAAGTGAATGGTGTCAATGGAGGTGTGGCAC...TACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR TCA 90 bp | CATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTATGGTGTGGTGTTCCCTaGTGTAGGCTTGCAGCTCGC | + |
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Preference number: 4 (lower is better) Translates to: HGTELQDSDTDTGVGAMVWCGVP*CRLAAR Trigger: GCGAGCTGCAAGCCTACATCAGGGAACACCACACCA...TACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR TCA 90 bp | CTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTAGCTCCTCTCTGCAGGTTCGGTaGCCAGCTTGGAGCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: LQDSDTDTGVGAMVKSSSSLQVR*PAWSHP Trigger: GGGATGGCTCCAAGCTGGTCACCGAACCTGCAGAGA...GGAGCTAGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | TCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGAGGAGAATTCGATTTTaGAGATGTGGGGCTCGGCGT | + |
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Preference number: 4 (lower is better) Translates to: SMAQNCRIRTRTRASGLWRRIRF*RCGARR Trigger: ACGCCGAGCCCCACATCTCCAAAATCGAATTCTCCT...CCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR TCA 90 bp | CATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTACGTCGTTCATCTCCTTaGCATAAGGACCAGGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: HGTELQDSDTDTGVGAMVRRSSP*HKDQVW Trigger: CCAAACCTGGTCCTTATGTCAAGGAGATGAACGACG...TACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR GCA 90 bp | CCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTGATGCTTTCACTGACTaGCGAGAGGTGGTTGAACAT | + |
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Preference number: 4 (lower is better) Translates to: PWHRTAGFGHGHGRRGYGDAFTD*REVVEH Trigger: ATGTTCAACCACCTCTCGGCAGTCAGTGAAAGCATC...ACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | CCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTGCAACTTCATTCTCTTaGGGTTGTTGGTACTGCGAG | + |
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Preference number: 4 (lower is better) Translates to: PWHRTAGFGHGHGRRGYGATSFS*GCWYCE Trigger: CTCGCAGTACCAACAACCCCAAGAGAATGAAGTTGC...ACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR GCA 90 bp | CATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAGATGCTTTCACTGACTaGCGAGAGGTGGTTGAACAT | + |
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Preference number: 4 (lower is better) Translates to: HGTELQDSDTDTGVGAMVDAFTD*REVVEH Trigger: ATGTTCAACCACCTCTCGGCAGTCAGTGAAAGCATC...TACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR GCA 90 bp | CTCTCCTTCCACCACGTGGTTCCTGGAGATCACACTCAAGTTGTCAGGCTCGGCTCAGGCCATGATCTCTaGAGGTTCGGTGACCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: LSFHHVVPGDHTQVVRLGSGHDL*RFGDQL Trigger: AAGCTGGTCACCGAACCTGCAGAGATCATGGCCTGA...GCCGAGCCTGACAACTTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| CDS-3UTR CCA 90 bp | GGCCGAGCTCCTAACTGCTGCCATGTCTCCAGCTCCATTTTGACTTTTATTTTTAGGTGGTGGTGGAGGTaGTGGCGGGAGACCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GRAPNCCHVSSSILTFIFRWWWR*WRETRP Trigger: GGGCCTGGTCTCCCGCCACCACCTCCACCACCACCT...AAAAATAAAAGTCAAAATGGAGCTGGAGACATGGCAGCAGTTAGGAGCTCGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
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| CDS-3UTR CCA 90 bp | TCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTTCCAGCTCCAACACTaGAGTATGTTTCTGAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SMAQNCRIRTRTRASGLWFQLQH*SMFLRR Trigger: TCTCCTCAGAAACATACTCCAGTGTTGGAGCTGGAA...CCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR TCA 90 bp | CCCCATCTCAGCCCCAGGCAGGTAAGTGATTTCTGCTTCAGTTGTGCCCTGGCCGAATGTCCTTGGAGTTaGTCACTTCCACAATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PHLSPRQVSDFCFSCALAECPWS*SLPQCP Trigger: TGGGCATTGTGGAAGTGATCAACTCCAAGGACATTC...GGCCAGGGCACAACTGAAGCAGAAATCACTTACCTGCCTGGGGCTGAGATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126687.2 |
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| CDS-3UTR TCA 90 bp | CTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTAGCTCCCCCATTACCTGGATCTaGATGTCCTTGGAGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: LQDSDTDTGVGAMVKSSSPITWI*MSLELI Trigger: GATCAACTCCAAGGACATTCAGATCCAGGTAATGGG...GGAGCTAGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR TCA 90 bp | CCTGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGTCTCTGCAGGTTCGGTaGCCAGCTTGGAGCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PARKDTVFHGTELQDSDTSLQVR*PAWSHP Trigger: GGGATGGCTCCAAGCTGGTCACCGAACCTGCAGAGA...CGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CCA 90 bp | CACATGCATGCAGGTACCCAGGAGGATGTTAGATTCCTTGGAACTGGAGTTACACTTCCCCGCAGCCTCTaGGAGGTCCGTCTAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HMHAGTQEDVRFLGTGVTLPRSL*EVRLTL Trigger: CAGGGTTAGACGGACCTCCCAGAGGCTGCGGGGAAG...TGTAACTCCAGTTCCAAGGAATCTAACATCCTCCTGGGTACCTGCATGCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACCTTCCCCGCAGCCTCTaGGAGGTCCGTCTAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHLPRSL*EVRLTL Trigger: CAGGGTTAGACGGACCTCCCAGAGGCTGCGGGGAAG...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR CCA 90 bp | CATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTATTCCAGCTCCAACACTaGAGTATGTTTCTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGTELQDSDTDTGVGAMVFQLQH*SMFLRR Trigger: TCTCCTCAGAAACATACTCCAGTGTTGGAGCTGGAA...TACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | TCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTCACTGAGGTACAGGTaGCATCCTTCTGTCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: SMAQNCRIRTRTRASGLWSLRYR*HPSVLL Trigger: TAATAAGACAGAAGGATGCCACCTGTACCTCAGTGA...CCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTCTAGTGCATCTTCACTaGGGTACAGGTGGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TELQDSDTDTGVGAMVKSLVHLH*GTGGIL Trigger: AAGGATGCCACCTGTACCTCAGTGAAGATGCACTAG...AGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACTCTCTGCAGGTTCGGTaGCCAGCTTGGAGCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHSLQVR*PAWSHP Trigger: GGGATGGCTCCAAGCTGGTCACCGAACCTGCAGAGA...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CCA 90 bp | CTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTAGCTCCTCATTCCTGTCCTCTTaGTATTCCACTCTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQDSDTDTGVGAMVKSSSSFLSS*YSTLHF Trigger: GAAGTGGAGAGTGGAATACCAAGAGGACAGGAATGA...GGAGCTAGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGTGCCACACCTCCATTaGCACCATTCACTTCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTVPHLH*HHSLPR Trigger: GCGGGGAAGTGAATGGTGTCAATGGAGGTGTGGCAC...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGAGCGAATCTGTCCTTaGGCCCTCAGGCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTERICP*ALRLGF Trigger: GAATCCCAGCCTGAGGGCTCAAGGACAGATTCGCTC...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTGAATGTCCTTGGAGTTaGTCACTTCCACAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TELQDSDTDTGVGAMVKSECPWS*SLPQCP Trigger: TGGGCATTGTGGAAGTGATCAACTCCAAGGACATTC...AGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCCCATCTCAGCCCCAGGCAGGTAAGTGATTTCTGCTTCAGTTGTGCCCTGTTCACATCCTGGATCTaGATGTCCTTGGAGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GPHLSPRQVSDFCFSCALFTSWI*MSLELI Trigger: GATCAACTCCAAGGACATTCAGATCCAGGATGTGAA...CAGGGCACAACTGAAGCAGAAATCACTTACCTGCCTGGGGCTGAGATGGGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126687.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGAGCTTCCACGGACGGTaGCACACCTCCATTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTSFHGR*HTSIDT Trigger: GGTGTCAATGGAGGTGTGGCACCGTCCGTGGAAGCT...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCCTTCCACCACGTGGTTCCTGGAGATCACACTCAAGTTGTCAGGCTCGGCTGGGGTTGTTGGTACTaGGAGACCATGAGAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSFHHVVPGDHTQVVRLGWGCWY*ETMRRK Trigger: TTTTCTTCTCATGGTCTCGCAGTACCAACAACCCCA...GCCGAGCCTGACAACTTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR CCA 90 bp | CCTGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGCATAAGGACCAGGTTTaGGGGACACGGCTATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PARKDTVFHGTELQDSDTHKDQV*GTRLSS Trigger: GCTGGATAGCCGTGTCCCCCAAACCTGGTCCTTATG...CGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACCTCATTCTCAAAGGGTaGAGGTGGCCCAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHLILKG*RWPRRR Trigger: CCTCCTCCTGGGCCACCTCCACCCTTTGAGAATGAG...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGCTCATTCTCAAAGGGTaGAGGTGGCCCAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTLILKG*RWPRRR Trigger: CCTCCTCCTGGGCCACCTCCACCCTTTGAGAATGAG...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGCTCGCTCCAGATGTTaGGGTAGGACCTCACCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTARSRC*GRTSPN Trigger: ATTGGGTGAGGTCCTACCTCAACATCTGGAGCGAGC...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | CACATGCATGCAGGTACCCAGGAGGATGTTAGATTCCTTGGAACTGGAGTTACACATAAGGACCAGGTTTaGGGGACACGGCTATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HMHAGTQEDVRFLGTGVTHKDQV*GTRLSS Trigger: GCTGGATAGCCGTGTCCCCCAAACCTGGTCCTTATG...TGTAACTCCAGTTCCAAGGAATCTAACATCCTCCTGGGTACCTGCATGCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR CCA 90 bp | ATTAAACTGAAAGGAAGAAATAGGCAGGGCTTTTCCTTATCAGTTACGGAGTTGAGGTGGTGGTGGAGGTaGTGGCGGGAGACCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKLKGRNRQGFSLSVTELRWWWR*WRETRP Trigger: GGGCCTGGTCTCCCGCCACCACCTCCACCACCACCT...CAACTCCGTAACTGATAAGGAAAAGCCCTGCCTATTTCTTCCTTTCAGTTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR GCA 90 bp | AGACTAGAAAACCCAACCAGAGCCAAACAACTGATTCCAGAAGCAATAGTCAGGAACCCTGCAGACAGCTaGTCCAGCCGGATGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLENPTRAKQLIPEAIVRNPADS*SSRMTA Trigger: TGCAGTCATCCGGCTGGAGCAGCTGTCTGCAGGGTT...CCTGACTATTGCTTCTGGAATCAGTTGTTTGGCTCTGGTTGGGTTTTCTAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR GCA 90 bp | AGAGCCAAACAACTGATTCCAGAAGCAATAGTCAGGCTCTTGGGCATTTTTGTCAGCTTCCACGGACGGTaGCACACCTCCATTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RAKQLIPEAIVRLLGIFVSFHGR*HTSIDT Trigger: GGTGTCAATGGAGGTGTGGCACCGTCCGTGGAAGCT...GACAAAAATGCCCAAGAGCCTGACTATTGCTTCTGGAATCAGTTGTTTGGCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR GCA 90 bp | ACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTCATATTGTCTTGAACTaGTCGGGAATGGGGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TELQDSDTDTGVGAMVKSHIVLN*SGMGNS Trigger: AGAATTCCCCATTCCCGAGCAGTTCAAGACAATATG...AGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR GCA 90 bp | TGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGATCAGGCCATGATCTCTaGAGGTTCGGTGACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CQKRYCFPWHRTAGFGHGSGHDL*RFGDQL Trigger: AAGCTGGTCACCGAACCTGCAGAGATCATGGCCTGA...TCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACCTGACTGCCGAGAGGTaGTTGAACATGTTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHLTAER*LNMLLP Trigger: GGGAAGCAACATGTTCAACCACCTCTCGGCAGTCAG...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | GAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGAGGAGAATTCGATTTTaGAGATGTGGGGCTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EKILFSMAQNCRIRTRTRRRIRF*RCGARR Trigger: ACGCCGAGCCCCACATCTCCAAAATCGAATTCTCCT...CCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | CCTGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGAGGAGAATTCGATTTTaGAGATGTGGGGCTCGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PARKDTVFHGTELQDSDTRRIRF*RCGARR Trigger: ACGCCGAGCCCCACATCTCCAAAATCGAATTCTCCT...CGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| 3UTR CAA 72 bp | TTCTCGGCCACGTGCAGAGAAGAGACACGAAGAGTGTaGTTGCTTGCCTGGAAGTCTGTGTACTATCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FSATCREETRRV*LLAWKSVYYQD Trigger: GTCTTGATAGTACACAGACTTCCAGGCAAGCAACAACACTCTTCGTGTCTCTTCTCTGCACGTGGCCGAGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR TCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACCGTCGTTCATCTCCTTaGCATAAGGACCAGGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHRRSSP*HKDQVW Trigger: CCAAACCTGGTCCTTATGTCAAGGAGATGAACGACG...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR TCA 90 bp | TTCCACCACGTGGTTCCTGGAGATCACACTCAAGTTGTCAGGCTCGGCATTAAGGTGATGGCTTCTCCTTaGTTGAGCTGGGCAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: FHHVVPGDHTQVVRLGIKVMASP*LSWANK Trigger: TTTATTTGCCCAGCTCAATCAAGGAGAAGCCATCAC...CTTAATGCCGAGCCTGACAACTTGAGTGTGATCTCCAGGAACCACGTGGTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR TCA 90 bp | GAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGCCCATTACCTGGATCTaGATGTCCTTGGAGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: EKILFSMAQNCRIRTRTRPITWI*MSLELI Trigger: GATCAACTCCAAGGACATTCAGATCCAGGTAATGGG...CCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | CACATGCATGCAGGTACCCAGGAGGATGTTAGATTCCTTGGAACTGGAGTTACACTAGTGCATCTTCACTaGGGTACAGGTGGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HMHAGTQEDVRFLGTGVTLVHLH*GTGGIL Trigger: AAGGATGCCACCTGTACCTCAGTGAAGATGCACTAG...TGTAACTCCAGTTCCAAGGAATCTAACATCCTCCTGGGTACCTGCATGCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCTGTGTACTATCAAGACTAGAAAACCCAACCAGAGCCAAACAACTGATAACCCTGCAGACAGCTaGTCCAGCCGGATGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLCTIKTRKPNQSQTTDNPADS*SSRMTA Trigger: TGCAGTCATCCGGCTGGAGCAGCTGTCTGCAGGGTT...ATCAGTTGTTTGGCTCTGGTTGGGTTTTCTAGTCTTGATAGTACACAGACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| 3UTR CAA 72 bp | ACATGCATGCAGGTACCCAGGAGGATGTTAGATTCCTaGGAACTGGAGTTACAGGAGGTTATGAGCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCMQVPRRMLDS*ELELQEVMSCQ Trigger: CTGACAGCTCATAACCTCCTGTAACTCCAGTTCCAAGGAATCTAACATCCTCCTGGGTACCTGCATGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR TCA 90 bp | GAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGTGATGGCTTCTCCTTaGTTGAGCTGGGCAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: EKILFSMAQNCRIRTRTRVMASP*LSWANK Trigger: TTTATTTGCCCAGCTCAATCAAGGAGAAGCCATCAC...CCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | GCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACGTGATGGCTTCTCCTTaGTTGAGCTGGGCAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: ARKDTVFHGTELQDSDTDVMASP*LSWANK Trigger: TTTATTTGCCCAGCTCAATCAAGGAGAAGCCATCAC...GTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | ACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTACTTTTCCCTTTATCTaGAGAGTGGATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TELQDSDTDTGVGAMVKSTFPFI*RVDLSH Trigger: ATGTGACAAATCCACTCTTCAGATAAAGGGAAAAGT...AGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | TTGTGTAGGTCACTTCTCTCCTTCCACCACGTGGTTCCTGGAGATCACACTCAATGCAGTTATCGACAGTaGTGGAGTTCACTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCRSLLSFHHVVPGDHTQCSYRQ*WSSLFP Trigger: AGGGAAAAGTGAACTCCATCACTGTCGATAACTGCA...TTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAGAAGTGACCTACACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR TCA 90 bp | GCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACTGCAGTTATCGACAGTaGTGGAGTTCACTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ARKDTVFHGTELQDSDTDCSYRQ*WSSLFP Trigger: AGGGAAAAGTGAACTCCATCACTGTCGATAACTGCA...GTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | CACATGCATGCAGGTACCCAGGAGGATGTTAGATTCCTTGGAACTGGAGTTACAGAATGTCCTTGGAGTTaGTCACTTCCACAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HMHAGTQEDVRFLGTGVTECPWS*SLPQCP Trigger: TGGGCATTGTGGAAGTGATCAACTCCAAGGACATTC...TGTAACTCCAGTTCCAAGGAATCTAACATCCTCCTGGGTACCTGCATGCATGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR TCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGAATGTCCTTGGAGTTaGTCACTTCCACAATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHECPWS*SLPQCP Trigger: TGGGCATTGTGGAAGTGATCAACTCCAAGGACATTC...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGCCCATTACCTGGATCTaGATGTCCTTGGAGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTPITWI*MSLELI Trigger: GATCAACTCCAAGGACATTCAGATCCAGGTAATGGG...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGTTGTCATCTGTGACATaGCGGAGCCCTTTAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTLSSVT*RSPLVM Trigger: CATCACTAAAGGGCTCCGGCATGTCACAGATGACAA...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGCAACTTCATTCTCTTaGGGTTGTTGGTACTGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHATSFS*GCWYCE Trigger: CTCGCAGTACCAACAACCCCAAGAGAATGAAGTTGC...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACTTGAGCCCTCAGGCTaGGATTCTTGTATGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQKRYCFPWHRTAGFGHGLEPSG*DSCMSS Trigger: AGAAGACATACAAGAATCCCAGCCTGAGGGCTCAAG...TCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CCA 90 bp | GAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGTCATTCCTGTCCTCTTaGTATTCCACTCTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: EKILFSMAQNCRIRTRTRSFLSS*YSTLHF Trigger: GAAGTGGAGAGTGGAATACCAAGAGGACAGGAATGA...CCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGTCTGTGTACTATCAAGACTAGAAAACCCAACCAGAGCCAAACAACTGATTCAGGCCATGATCTCTaGAGGTTCGGTGACCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLCTIKTRKPNQSQTTDSGHDL*RFGDQL Trigger: AAGCTGGTCACCGAACCTGCAGAGATCATGGCCTGA...ATCAGTTGTTTGGCTCTGGTTGGGTTTTCTAGTCTTGATAGTACACAGACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGTTCCAGCTCCAACACTaGAGTATGTTTCTGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTFQLQH*SMFLRR Trigger: TCTCCTCAGAAACATACTCCAGTGTTGGAGCTGGAA...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACTCATTCCTGTCCTCTTaGTATTCCACTCTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHSFLSS*YSTLHF Trigger: GAAGTGGAGAGTGGAATACCAAGAGGACAGGAATGA...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGTCACTGAGGTACAGGTaGCATCCTTCTGTCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: PARKDTVFHGTELQDSDTSLRYR*HPSVLL Trigger: TAATAAGACAGAAGGATGCCACCTGTACCTCAGTGA...CGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | GGAAGTCTGTGTACTATCAAGACTAGAAAACCCAACCAGAGCCAAACAACTGATCTAGTGCATCTTCACTaGGGTACAGGTGGCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLCTIKTRKPNQSQTTDLVHLH*GTGGIL Trigger: AAGGATGCCACCTGTACCTCAGTGAAGATGCACTAG...ATCAGTTGTTTGGCTCTGGTTGGGTTTTCTAGTCTTGATAGTACACAGACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR GCA 90 bp | GCATTAGAGACCTGTATGGGGTTGTCTGATACTATGGGTGACTTCAAAACTGCATTGTCATCTGTGACATaGCGGAGCCCTTTAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALETCMGLSDTMGDFKTALSSVT*RSPLVM Trigger: CATCACTAAAGGGCTCCGGCATGTCACAGATGACAA...TGCAGTTTTGAAGTCACCCATAGTATCAGACAACCCCATACAGGTCTCTAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR GCA 90 bp | CAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACCATATTGTCTTGAACTaGTCGGGAATGGGGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKRYCFPWHRTAGFGHGHHIVLN*SGMGNS Trigger: AGAATTCCCCATTCCCGAGCAGTTCAAGACAATATG...GTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGCATATTGTCTTGAACTaGTCGGGAATGGGGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTHIVLN*SGMGNS Trigger: AGAATTCCCCATTCCCGAGCAGTTCAAGACAATATG...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | CCTTTAACTGCCGTGTTTACTAGTTATCACGTGGAAGTAAAATCACACACAAATCTCATTCTCAAAGGGTaGAGGTGGCCCAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLTAVFTSYHVEVKSHTNLILKG*RWPRRR Trigger: CCTCCTCCTGGGCCACCTCCACCCTTTGAGAATGAG...ATTTGTGTGTGATTTTACTTCCACGTGATAACTAGTAAACACGGCAGTTAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR TCA 90 bp | CTTTGTCTTAGGATATGCAGGCAAATTAGAACTTTTAAAGTGACTCACGAGAAAGAGCGAATCTGTCCTTaGGCCCTCAGGCTGGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: LCLRICRQIRTFKVTHEKERICP*ALRLGF Trigger: GAATCCCAGCCTGAGGGCTCAAGGACAGATTCGCTC...TTTCTCGTGAGTCACTTTAAAAGTTCTAATTTGCCTGCATATCCTAAGACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGACTTTTCCCTTTATCTaGAGAGTGGATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: PARKDTVFHGTELQDSDTTFPFI*RVDLSH Trigger: ATGTGACAAATCCACTCTTCAGATAAAGGGAAAAGT...CGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR TCA 90 bp | AGAGCCAAACAACTGATTCCAGAAGCAATAGTCAGGCTCTTGGGCATTTTTGTCTGCAGTTATCGACAGTaGTGGAGTTCACTTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RAKQLIPEAIVRLLGIFVCSYRQ*WSSLFP Trigger: AGGGAAAAGTGAACTCCATCACTGTCGATAACTGCA...GACAAAAATGCCCAAGAGCCTGACTATTGCTTCTGGAATCAGTTGTTTGGCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR CCA 90 bp | GGCCGAGCTCCTAACTGCTGCCATGTCTCCAGCTCCATTTTGACTTTTATTTTTTCACTGAGGTACAGGTaGCATCCTTCTGTCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: GRAPNCCHVSSSILTFIFSLRYR*HPSVLL Trigger: TAATAAGACAGAAGGATGCCACCTGTACCTCAGTGA...AAAAATAAAAGTCAAAATGGAGCTGGAGACATGGCAGCAGTTAGGAGCTCGGCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGACTTTTCCCTTTATCTaGAGAGTGGATTTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RKDTVFHGTELQDSDTDTTFPFI*RVDLSH Trigger: ATGTGACAAATCCACTCTTCAGATAAAGGGAAAAGT...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR CCA 90 bp | ATTAAACTGAAAGGAAGAAATAGGCAGGGCTTTTCCTTATCAGTTACGGAGTTGCTTGAGCCCTCAGGCTaGGATTCTTGTATGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKLKGRNRQGFSLSVTELLEPSG*DSCMSS Trigger: AGAAGACATACAAGAATCCCAGCCTGAGGGCTCAAG...CAACTCCGTAACTGATAAGGAAAAGCCCTGCCTATTTCTTCCTTTCAGTTTAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR CCA 90 bp | CTTTGTCTTAGGATATGCAGGCAAATTAGAACTTTTAAAGTGACTCACGAGAAACTTGAGCCCTCAGGCTaGGATTCTTGTATGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLRICRQIRTFKVTHEKLEPSG*DSCMSS Trigger: AGAAGACATACAAGAATCCCAGCCTGAGGGCTCAAG...TTTCTCGTGAGTCACTTTAAAAGTTCTAATTTGCCTGCATATCCTAAGACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS CCA 90 bp | ATCCTCATTCTCAAAGGGTGGAGGTGGCCCAGGAGGAGGTGGTGGTaGAGGTGGTGGCGGGAGACCAGGCCCAGAGGAGAGGATGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILILKGWRWPRRRWW*RWWRETRPRGEDGK Trigger: TTTTCCATCCTCTCCTCTGGGCCTGGTCTCCCGCCACCACCTCCACCACCACCTCCTCCTGGGCCACCTCCACCCTTTGAGAATGAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | CCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTGGTGCCACACCTCCATaGACACCATTCACTTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PWHRTAGFGHGHGRRGYGGATPP*TPFTSP Trigger: CGGGGAAGTGAATGGTGTCAATGGAGGTGTGGCACC...ACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR CAA 90 bp | CCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTGCCACAGGACCTGTTTaGCTCCAAGTGAGGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PWHRTAGFGHGHGRRGYGATGPV*LQVRPV Trigger: CACAGGCCTCACTTGGAGCAAAACAGGTCCTGTGGC...ACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR CAA 90 bp | CATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAGGTGCCACACCTCCATaGACACCATTCACTTCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: HGTELQDSDTDTGVGAMVGATPP*TPFTSP Trigger: CGGGGAAGTGAATGGTGTCAATGGAGGTGTGGCACC...TACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR CAA 90 bp | CATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAGCCACAGGACCTGTTTaGCTCCAAGTGAGGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HGTELQDSDTDTGVGAMVATGPV*LQVRPV Trigger: CACAGGCCTCACTTGGAGCAAAACAGGTCCTGTGGC...TACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS GCA 90 bp | GCTGACGCTGTGGATGCCACAGGACCCTCTTGGGGTTGTTGGTACTaGGAGACCATGAGAAGAAAAGCACGCTGGGCTTGGAAAGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: ADAVDATGPSWGCWY*ETMRRKARWAWKAP Trigger: CGGTGCTTTCCAAGCCCAGCGTGCTTTTCTTCTCATGGTCTCGCAGTACCAACAACCCCAAGAGGGTCCTGTGGCATCCACAGCGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119341.2 |
||
| CDS-3UTR CAA 90 bp | CCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTGTCATTCCTGTCCTCTaGGTATTCCACTCTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PWHRTAGFGHGHGRRGYGVIPVL*VFHSPL Trigger: AAGTGGAGAGTGGAATACCAAGAGGACAGGAATGAC...ACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS-3UTR CAA 90 bp | TCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGGTCATTCCTGTCCTCTaGGTATTCCACTCTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SMAQNCRIRTRTRASGLWVIPVL*VFHSPL Trigger: AAGTGGAGAGTGGAATACCAAGAGGACAGGAATGAC...CCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS TCA 90 bp | TGGATGCCACAGGACCCTCTTGGGGTTGTTGGTACTGCGAGACCATaGGAAGAAAAGCACGCTGGGCTTGGAAAGCACCGTGCACCATTT | + |
|
Preference number: 5 (lower is better) Translates to: WMPQDPLGVVGTARP*EEKHAGLGKHRAPF Trigger: AAATGGTGCACGGTGCTTTCCAAGCCCAGCGTGCTTTTCTTCTCATGGTCTCGCAGTACCAACAACCCCAAGAGGGTCCTGTGGCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119341.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTTCCACCACGTGGTTCCTGGAGATCACACTCAAGTTGTCAGGCTCGGCAGGTGGTTGAACATGTaGCTTCCCCGGTTTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSFHHVVPGDHTQVVRLGRWLNM*LPRFLS Trigger: AGAGAGAAACCGGGGAAGCAACATGTTCAACCACCT...GCCGAGCCTGACAACTTGAGTGTGATCTCCAGGAACCACGTGGTGGAAGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021802.16 |
||
| CDS-3UTR CAA 90 bp | CATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTATTCTTGTATGTCTTCTaGTCATCTGTGACATGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HGTELQDSDTDTGVGAMVFLYVF*SSVTCR Trigger: CCGGCATGTCACAGATGACAAGAAGACATACAAGAA...TACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | TCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGGAAAGTCTGTATTTCTaGAATCTTCTCCGATATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SMAQNCRIRTRTRASGLWESLYF*NLLRYG Trigger: CCCATATCGGAGAAGATTCAAGAAATACAGACTTTC...CCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGACTGCCGAGAGGTGGTaGAACATGTTGCTTCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PARKDTVFHGTELQDSDTTAERW*NMLLPR Trigger: CCGGGGAAGCAACATGTTCAACCACCTCTCGGCAGT...CGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGAACTGCCGAGAGGTGGTaGAACATGTTGCTTCCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CQKRYCFPWHRTAGFGHGTAERW*NMLLPR Trigger: CCGGGGAAGCAACATGTTCAACCACCTCTCGGCAGT...TCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGAGAGCGAATCTGTCCTaGAGCCCTCAGGCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: PARKDTVFHGTELQDSDTRANLS*SPQAGI Trigger: AATCCCAGCCTGAGGGCTCAAGGACAGATTCGCTCT...CGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | CCTGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGAGGAGAATTCGATTTaGGAGATGTGGGGCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PARKDTVFHGTELQDSDTEENSI*EMWGSA Trigger: CGCCGAGCCCCACATCTCCAAAATCGAATTCTCCTC...CGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGGAGGAGAATTCGATTTaGGAGATGTGGGGCTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EKILFSMAQNCRIRTRTREENSI*EMWGSA Trigger: CGCCGAGCCCCACATCTCCAAAATCGAATTCTCCTC...CCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAACTGCAGGATTCGGACACGGACACGGGCGTCGGGGCTATGGTAAAATCTACCAGGCCAAACTTCTaGCAGTTATCGACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TELQDSDTDTGVGAMVKSTRPNF*QLSTVM Trigger: CATCACTGTCGATAACTGCAAGAAGTTTGGCCTGGT...AGATTTTACCATAGCCCCGACGCCCGTGTCCGTGTCCGAATCCTGCAGTTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | GCATTAGAGACCTGTATGGGGTTGTCTGATACTATGGGTGACTTCAAAACTGCAAGAGCGAATCTGTCCTaGAGCCCTCAGGCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: ALETCMGLSDTMGDFKTARANLS*SPQAGI Trigger: AATCCCAGCCTGAGGGCTCAAGGACAGATTCGCTCT...TGCAGTTTTGAAGTCACCCATAGTATCAGACAACCCCATACAGGTCTCTAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR CAA 90 bp | GAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGACCAGGCCAAACTTCTaGCAGTTATCGACAGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: EKILFSMAQNCRIRTRTRTRPNF*QLSTVM Trigger: CATCACTGTCGATAACTGCAAGAAGTTTGGCCTGGT...CCGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGACACGGTCATTCCTGTCCTCTaGGTATTCCACTCTCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: RKDTVFHGTELQDSDTDTVIPVL*VFHSPL Trigger: AAGTGGAGAGTGGAATACCAAGAGGACAGGAATGAC...CGTGTCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAACTGAAAGGAAGAAATAGGCAGGGCTTTTCCTTATCAGTTACGGAGTTGAGAGCGAATCTGTCCTaGAGCCCTCAGGCTGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: IKLKGRNRQGFSLSVTELRANLS*SPQAGI Trigger: AATCCCAGCCTGAGGGCTCAAGGACAGATTCGCTCT...CAACTCCGTAACTGATAAGGAAAAGCCCTGCCTATTTCTTCCTTTCAGTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAACTGAAAGGAAGAAATAGGCAGGGCTTTTCCTTATCAGTTACGGAGTTGGAGGAGAATTCGATTTaGGAGATGTGGGGCTCGGCG | + |
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Preference number: 5 (lower is better) Translates to: IKLKGRNRQGFSLSVTELEENSI*EMWGSA Trigger: CGCCGAGCCCCACATCTCCAAAATCGAATTCTCCTC...CAACTCCGTAACTGATAAGGAAAAGCCCTGCCTATTTCTTCCTTTCAGTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR CAA 90 bp | GCATTAGAGACCTGTATGGGGTTGTCTGATACTATGGGTGACTTCAAAACTGCAACCAGGCCAAACTTCTaGCAGTTATCGACAGTGATG | + |
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Preference number: 5 (lower is better) Translates to: ALETCMGLSDTMGDFKTATRPNF*QLSTVM Trigger: CATCACTGTCGATAACTGCAAGAAGTTTGGCCTGGT...TGCAGTTTTGAAGTCACCCATAGTATCAGACAACCCCATACAGGTCTCTAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR CAA 90 bp | TGCCAGAAAAGATACTGTTTTCCATGGCACAGAACTGCAGGATTCGGACACGGAGAAAGTCTGTATTTCTaGAATCTTCTCCGATATGGG | + |
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Preference number: 5 (lower is better) Translates to: CQKRYCFPWHRTAGFGHGESLYF*NLLRYG Trigger: CCCATATCGGAGAAGATTCAAGAAATACAGACTTTC...TCCGTGTCCGAATCCTGCAGTTCTGTGCCATGGAAAACAGTATCTTTTCTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS-3UTR CAA 90 bp | GCATTAGAGACCTGTATGGGGTTGTCTGATACTATGGGTGACTTCAAAACTGCATTCTTGTATGTCTTCTaGTCATCTGTGACATGCCGG | + |
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Preference number: 5 (lower is better) Translates to: ALETCMGLSDTMGDFKTAFLYVF*SSVTCR Trigger: CCGGCATGTCACAGATGACAAGAAGACATACAAGAA...TGCAGTTTTGAAGTCACCCATAGTATCAGACAACCCCATACAGGTCTCTAATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS-3UTR CAA 90 bp | AGACTAGAAAACCCAACCAGAGCCAAACAACTGATTCCAGAAGCAATAGTCAGGTTCTTGTATGTCTTCTaGTCATCTGTGACATGCCGG | + |
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Preference number: 5 (lower is better) Translates to: RLENPTRAKQLIPEAIVRFLYVF*SSVTCR Trigger: CCGGCATGTCACAGATGACAAGAAGACATACAAGAA...CCTGACTATTGCTTCTGGAATCAGTTGTTTGGCTCTGGTTGGGTTTTCTAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 |
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| CDS TCA 90 bp | CCACATGATCAAACACCAGGCCAAACTTCTTGCAGTTATCGACAGTaGTGGAGTTCACTTTTCCCTTTATCTGAAGAGTGGATTTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: PHDQTPGQTSCSYRQ*WSSLFPLSEEWICH Trigger: GTGACAAATCCACTCTTCAGATAAAGGGAAAAGTGAACTCCATCACTGTCGATAACTGCAAGAAGTTTGGCCTGGTGTTTGATCATGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS CCA 72 bp | CAGGCCCAGAGGAGAGGATGGAAAACGCTGACGCTGTaGATGCCACAGGACCCTCTTGGGGTTGTTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: QAQRRGWKTLTL*MPQDPLGVVGT Trigger: AGTACCAACAACCCCAAGAGGGTCCTGTGGCATCCACAGCGTCAGCGTTTTCCATCCTCTCCTCTGGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119341.2 |
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| CDS GCA 72 bp | GTGGATGCCACAGGACCCTCTTGGGGTTGTTGGTACTaGGAGACCATGAGAAGAAAAGCACGCTGGGCTTGG | + |
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Preference number: 6 (lower is better) Translates to: VDATGPSWGCWY*ETMRRKARWAW Trigger: CCAAGCCCAGCGTGCTTTTCTTCTCATGGTCTCGCAGTACCAACAACCCCAAGAGGGTCCTGTGGCATCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119341.2 |
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| CDS TCA 72 bp | CAGGACCCTCTTGGGGTTGTTGGTACTGCGAGACCATaGGAAGAAAAGCACGCTGGGCTTGGAAAGCACCGT | + |
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Preference number: 6 (lower is better) Translates to: QDPLGVVGTARP*EEKHAGLGKHR Trigger: ACGGTGCTTTCCAAGCCCAGCGTGCTTTTCTTCTCATGGTCTCGCAGTACCAACAACCCCAAGAGGGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119341.2 |
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| CDS CAA 90 bp | GGGTTGTTGGTACTGCGAGACCATGAGAAGAAAAGCACGCTGGGCTaGGAAAGCACCGTGCACCATTTCTGCGTGAGTCTCTACGTCACC | + |
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Preference number: 6 (lower is better) Translates to: GLLVLRDHEKKSTLG*ESTVHHFCVSLYVT Trigger: GGTGACGTAGAGACTCACGCAGAAATGGTGCACGGTGCTTTCCAAGCCCAGCGTGCTTTTCTTCTCATGGTCTCGCAGTACCAACAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS CAA 90 bp | CTCCGATATGGGCTTCAGAAGGACAGCAACTTCATTCTCTTGGGGTaGTTGGTACTGCGAGACCATGAGAAGAAAAGCACGCTGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRYGLQKDSNFILLG*LVLRDHEKKSTLGL Trigger: CAAGCCCAGCGTGCTTTTCTTCTCATGGTCTCGCAGTACCAACAACCCCAAGAGAATGAAGTTGCTGTCCTTCTGAAGCCCATATCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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| CDS CAA 72 bp | CGGCGTGTGAGTTTTGGTTGGAGAGCGAATCTGTCCTaGAGCCCTCAGGCTGGGATTCTTGTATGTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: RRVSFGWRANLS*SPQAGILVCLL Trigger: AAGAAGACATACAAGAATCCCAGCCTGAGGGCTCAAGGACAGATTCGCTCTCCAACCAAAACTCACACGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS TCA 72 bp | CAAACACCAGGCCAAACTTCTTGCAGTTATCGACAGTaGTGGAGTTCACTTTTCCCTTTATCTGAAGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: QTPGQTSCSYRQ*WSSLFPLSEEW Trigger: CCACTCTTCAGATAAAGGGAAAAGTGAACTCCATCACTGTCGATAACTGCAAGAAGTTTGGCCTGGTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021802.16 ENSMUST00000119341.2 ENSMUST00000225824.2 |
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| CDS CCA 72 bp | CTCGGAAAGTCTGTATTTCTTGAATCTTCTCCGATATaGGCTTCAGAAGGACAGCAACTTCATTCTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LGKSVFLESSPI*ASEGQQLHSLG Trigger: CCCAAGAGAATGAAGTTGCTGTCCTTCTGAAGCCCATATCGGAGAAGATTCAAGAAATACAGACTTTCCGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021802.16 ENSMUST00000225824.2 |
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