Pregenerated sensors for CANT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025575Ensembl transcript IDs: ENSMUST00000017620.10, ENSMUST00000092378.10, ENSMUST00000106287.8, ENSMUST00000106288.8, ENSMUST00000106289.9, ENSMUST00000164927.2
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | GGTCTCCAGTCAGGTGCAGCCCCTCCCTCAACCACTGCTGAGGGGTaGAAGCATGGCAGCCCTTGGAAGTTGCAGAGGCCAGGGATGCTG | + |
Preference number: 1 (lower is better) Translates to: GLQSGAAPPSTTAEG*KHGSPWKLQRPGML Trigger: CAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTGCCATGCTTTCACCCCTCAGCAGTGGTTGAGGGAGGGGCTGCACCTGACTGGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR TCA 90 bp | GGTAGTCAGGCCCCAGTGGCAGTGGCTTCCTGTGGAAGGGGTTTGTaGCGGTCATCAGGGCCCTGTGCCTACAGCAGTACCGGTGTCCTG | + |
Preference number: 1 (lower is better) Translates to: GSQAPVAVASCGRGL*RSSGPCAYSSTGVL Trigger: CAGGACACCGGTACTGCTGTAGGCACAGGGCCCTGATGACCGTCACAAACCCCTTCCACAGGAAGCCACTGCCACTGGGGCCTGACTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CCA 90 bp | CAGCAGCAGCCTGCTGTACTGAGGGTAGTCAGGCCCCAGTGGCAGTaGCTTCCTGTGGAAGGGGTTTGTGACGGTCATCAGGGCCCTGTG | + |
Preference number: 1 (lower is better) Translates to: QQQPAVLRVVRPQWQ*LPVEGVCDGHQGPV Trigger: CACAGGGCCCTGATGACCGTCACAAACCCCTTCCACAGGAAGCCACTGCCACTGGGGCCTGACTACCCTCAGTACAGCAGGCTGCTGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR TCA 90 bp | AGCTGCAGCAGTGATCAATCCCTACCACCAAGTGGCAGTGCAGAGTaGGCGCGGGTGGGCGGAGCACCTGGGGTTCCTTGTATAGGACCC | + |
Preference number: 1 (lower is better) Translates to: SCSSDQSLPPSGSAE*ARVGGAPGVPCIGP Trigger: GGGTCCTATACAAGGAACCCCAGGTGCTCCGCCCACCCGCGCTCACTCTGCACTGCCACTTGGTGGTAGGGATTGATCACTGCTGCAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR TCA 90 bp | CCTACAGCAGTACCGGTGTCCTGTTCTAAGGGTGCCGGAGGCAGGTaGGGTGCTGCTGCCTGCAGAATGACCTCTGAGCCTGACTCTGCT | + |
Preference number: 1 (lower is better) Translates to: PTAVPVSCSKGAGGR*GAAACRMTSEPDSA Trigger: AGCAGAGTCAGGCTCAGAGGTCATTCTGCAGGCAGCAGCACCTCACCTGCCTCCGGCACCCTTAGAACAGGACACCGGTACTGCTGTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CCA 90 bp | TGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTCCCAAGGGGTaGCCCTCACCCTGCCATGTAAACATTCACTTTCCAGGGGTCTGC | + |
Preference number: 1 (lower is better) Translates to: CAREAPECGQVPPKG*PSPCHVNIHFPGVC Trigger: GCAGACCCCTGGAAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CCA 90 bp | ACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTAGTCAGGCCCCAGTaGCAGTGGCTTCCTGTGGAAGGGGTTTGTGACGGTCATCAGGGC | + |
Preference number: 1 (lower is better) Translates to: TSQQQPAVLRVVRPQ*QWLPVEGVCDGHQG Trigger: GCCCTGATGACCGTCACAAACCCCTTCCACAGGAAGCCACTGCCACTGGGGCCTGACTACCCTCAGTACAGCAGGCTGCTGCTGACTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR GCA 90 bp | GCTCCAGAGTGTGGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTaGCATGTAAACATTCACTTTCCAGGGGTCTGCAGCATATGGAAT | + |
Preference number: 1 (lower is better) Translates to: APECGQVPPKGWPSP*HVNIHFPGVCSIWN Trigger: ATTCCATATGCTGCAGACCCCTGGAAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCCACACTCTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR GCA 90 bp | CACAACAGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTaGTGTACTGAGGGTAGTCAGGCCCCAGTGGCAGTGGCTTCCTGT | + |
Preference number: 1 (lower is better) Translates to: HNSTRRPQHHKSAAA*CTEGSQAPVAVASC Trigger: ACAGGAAGCCACTGCCACTGGGGCCTGACTACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACTGTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR GCA 90 bp | GGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTCCAGGGGTCTaGAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCC | + |
Preference number: 1 (lower is better) Translates to: GWPSPCHVNIHFPGV*SIWNARVTWEKEGP Trigger: GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR TCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGAGTGGCAGTGCAGAGTaGGCGCGGGTGGGCGGAGCA | + |
Preference number: 2 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMSGSAE*ARVGGA Trigger: TGCTCCGCCCACCCGCGCTCACTCTGCACTGCCACT...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR TCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCAGTGGCAGTGCAGAGTaGGCGCGGGTGGGCGGAGCA | + |
Preference number: 2 (lower is better) Translates to: PGVCSIWNARVTWEKEGPSGSAE*ARVGGA Trigger: TGCTCCGCCCACCCGCGCTCACTCTGCACTGCCACT...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR TCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGAGTGGCAGTGCAGAGTaGGCGCGGGTGGGCGGAGCA | + |
Preference number: 2 (lower is better) Translates to: STARKQSCAREAPECGQVSGSAE*ARVGGA Trigger: TGCTCCGCCCACCCGCGCTCACTCTGCACTGCCACT...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR TCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGGGCATGGCTGGATTCTaGAGGCCAGAGGCTCAGAAG | + |
Preference number: 2 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMGMAGF*RPEAQK Trigger: CTTCTGAGCCTCTGGCCTTCAGAATCCAGCCATGCC...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCTGGCCCTCGCCCCTCTaGGCGTGCGAGCTTACTCAT | + |
Preference number: 2 (lower is better) Translates to: QQLASNPVLERLQSVGRCWPSPL*ACELTH Trigger: ATGAGTAAGCTCGCACGCCCAGAGGGGCGAGGGCCA...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCCCCCCAGTGCCTGGCTaGCAGGCCTACCTCAGACTA | + |
Preference number: 2 (lower is better) Translates to: PGVCSIWNARVTWEKEGPPPVPG*QAYLRL Trigger: TAGTCTGAGGTAGGCCTGCCAGCCAGGCACTGGGGG...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 61% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTCCCCCAGTGCCTGGCTaGCAGGCCTACCTCAGACTA | + |
Preference number: 2 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFPPVPG*QAYLRL Trigger: TAGTCTGAGGTAGGCCTGCCAGCCAGGCACTGGGGG...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTAGCAGTACACCCATATaGGCCGGGGCTCAGCTCCCT | + |
Preference number: 2 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFSSTPI*AGAQLP Trigger: AGGGAGCTGAGCCCCGGCCCATATGGGTGTACTGCT...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCAGCAGTACACCCATATaGGCCGGGGCTCAGCTCCCT | + |
Preference number: 2 (lower is better) Translates to: QQLASNPVLERLQSVGRCSSTPI*AGAQLP Trigger: AGGGAGCTGAGCCCCGGCCCATATGGGTGTACTGCT...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR TCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTGGCATGGCTGGATTCTaGAGGCCAGAGGCTCAGAAG | + |
Preference number: 2 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFGMAGF*RPEAQK Trigger: CTTCTGAGCCTCTGGCCTTCAGAATCCAGCCATGCC...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTATCCCTACCACCAAGTaGCAGTGCAGAGTGAGCGCG | + |
Preference number: 2 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFIPTTK*QCRVSA Trigger: CGCGCTCACTCTGCACTGCCACTTGGTGGTAGGGAT...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR GCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGCACTTTCCAGGGGTCTaGAGCATATGGAATGCCAGA | + |
Preference number: 2 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMHFPGV*SIWNAR Trigger: TCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTG...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGATCCCTACCACCAAGTaGCAGTGCAGAGTGAGCGCG | + |
Preference number: 2 (lower is better) Translates to: STARKQSCAREAPECGQVIPTTK*QCRVSA Trigger: CGCGCTCACTCTGCACTGCCACTTGGTGGTAGGGAT...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCAGGGAAAGGCATGGCTaGATTCTGAAGGCCAGAGGC | + |
Preference number: 2 (lower is better) Translates to: QQLASNPVLERLQSVGRCRERHG*ILKARG Trigger: GCCTCTGGCCTTCAGAATCCAGCCATGCCTTTCCCT...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCGACCAGGGAAAGGCATaGCTGGATTCTGAAGGCCAG | + |
Preference number: 2 (lower is better) Translates to: PGVCSIWNARVTWEKEGPDQGKA*LDSEGQ Trigger: CTGGCCTTCAGAATCCAGCCATGCCTTTCCCTGGTC...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTGACCAGGGAAAGGCATaGCTGGATTCTGAAGGCCAG | + |
Preference number: 2 (lower is better) Translates to: TARKQSCAREAPECGQVPDQGKA*LDSEGQ Trigger: CTGGCCTTCAGAATCCAGCCATGCCTTTCCCTGGTC...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR TCA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTCTGCTGCCTGCAGAATaGCCTCTGAGCCTGACTCTG | + |
Preference number: 2 (lower is better) Translates to: STRRPQHHKSAAACCTEGLLPAE*PLSLTL Trigger: CAGAGTCAGGCTCAGAGGTCATTCTGCAGGCAGCAG...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCATGGCCCTCGCCCCTCTaGGCGTGCGAGCTTACTCAT | + |
Preference number: 2 (lower is better) Translates to: NTGLLQRHILDREVVERPWPSPL*ACELTH Trigger: ATGAGTAAGCTCGCACGCCCAGAGGGGCGAGGGCCA...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCATGGCCCTCGCCCCTCTaGGCGTGCGAGCTTACTCAT | + |
Preference number: 2 (lower is better) Translates to: TQPNTVDTHQGGLAELPAWPSPL*ACELTH Trigger: ATGAGTAAGCTCGCACGCCCAGAGGGGCGAGGGCCA...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CAGCCCTTGGAAGTTGCAGAGGCCAGGGATGCTGAGACTCTTTCTGTAAAAGCTCCCCCAGTGCCTGGCTaGCAGGCCTACCTCAGACTA | + |
Preference number: 2 (lower is better) Translates to: QPLEVAEARDAETLSVKAPPVPG*QAYLRL Trigger: TAGTCTGAGGTAGGCCTGCCAGCCAGGCACTGGGGG...AGCTTTTACAGAAAGAGTCTCAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCGGGGTCTGCAGCATATaGAATGCCAGAGTCACATGG | + |
Preference number: 2 (lower is better) Translates to: QQLASNPVLERLQSVGRCGVCSI*NARVTW Trigger: CCATGTGACTCTGGCATTCCATATGCTGCAGACCCC...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAAGAGGCTCCAGAGTGTaGGCAGGTGCCTCCCAAGGG | + |
Preference number: 2 (lower is better) Translates to: TQPNTVDTHQGGLAELPARGSRV*AGASQG Trigger: CCCTTGGGAGGCACCTGCCCACACTCTGGAGCCTCT...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTAGGGAAAGGCATGGCTaGATTCTGAAGGCCAGAGGC | + |
Preference number: 2 (lower is better) Translates to: STRRPQHHKSAAACCTEGRERHG*ILKARG Trigger: GCCTCTGGCCTTCAGAATCCAGCCATGCCTTTCCCT...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCTACTGGACAGAGAAGTaGTGGAAAGGCCAGAGACCA | + |
Preference number: 2 (lower is better) Translates to: QQLASNPVLERLQSVGRCYWTEK*WKGQRP Trigger: TGGTCTCTGGCCTTTCCACCACTTCTCTGTCCAGTA...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCTACTGGACAGAGAAGTaGTGGAAAGGCCAGAGACCA | + |
Preference number: 2 (lower is better) Translates to: PGVCSIWNARVTWEKEGPYWTEK*WKGQRP Trigger: TGGTCTCTGGCCTTTCCACCACTTCTCTGTCCAGTA...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CAA 90 bp | GCCTGCAGAATGACCTCTGAGCCTGACTCTGCTGCCTTGGCTCTTTaGAACATGGACAGAACAGGACAGCAGAAAACAGTGAGGCCTCCC | + |
Preference number: 2 (lower is better) Translates to: ACRMTSEPDSAALAL*NMDRTGQQKTVRPP Trigger: GGGAGGCCTCACTGTTTTCTGCTGTCCTGTTCTGTCCATGTTCAAAAGAGCCAAGGCAGCAGAGTCAGGCTCAGAGGTCATTCTGCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAAAGCATGGCAGCCCTTaGAAGTTGCAGAGGCCAGGG | + |
Preference number: 2 (lower is better) Translates to: TQPNTVDTHQGGLAELPAKHGSP*KLQRPG Trigger: CCCTGGCCTCTGCAACTTCCAAGGGCTGCCATGCTT...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CAA 90 bp | GGTGCTGCTGCCTGCAGAATGACCTCTGAGCCTGACTCTGCTGCCTaGGCTCTTTTGAACATGGACAGAACAGGACAGCAGAAAACAGTG | + |
Preference number: 2 (lower is better) Translates to: GAAACRMTSEPDSAA*ALLNMDRTGQQKTV Trigger: CACTGTTTTCTGCTGTCCTGTTCTGTCCATGTTCAAAAGAGCCAAGGCAGCAGAGTCAGGCTCAGAGGTCATTCTGCAGGCAGCAGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | TTCACTTTCCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGATCCCTACCACCAAGTaGCAGTGCAGAGTGAGCGCG | + |
Preference number: 2 (lower is better) Translates to: FTFQGSAAYGMPESHGRKIPTTK*QCRVSA Trigger: CGCGCTCACTCTGCACTGCCACTTGGTGGTAGGGAT...CTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCAAGGGAAAGGCATGGCTaGATTCTGAAGGCCAGAGGC | + |
Preference number: 2 (lower is better) Translates to: NTGLLQRHILDREVVERPRERHG*ILKARG Trigger: GCCTCTGGCCTTCAGAATCCAGCCATGCCTTTCCCT...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAGGGGTCTGCAGCATATaGAATGCCAGAGTCACATGG | + |
Preference number: 2 (lower is better) Translates to: TQPNTVDTHQGGLAELPAGVCSI*NARVTW Trigger: CCATGTGACTCTGGCATTCCATATGCTGCAGACCCC...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CAA 90 bp | CTCAGAATCACACAACCGAACACAGTTGACACACATCAAGGAGGTTaGGCTGAGCTCCCAGCACAACAGTACACGAAGACCTCAGCACCA | + |
Preference number: 2 (lower is better) Translates to: LRITQPNTVDTHQGG*AELPAQQYTKTSAP Trigger: TGGTGCTGAGGTCTTCGTGTACTGTTGTGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGTGATTCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTTTCAAAGACACATACTaGACAGAGAAGTGGTGGAAA | + |
Preference number: 2 (lower is better) Translates to: TARKQSCAREAPECGQVPFKDTY*TEKWWK Trigger: TTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAA...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCATTCAAAGACACATACTaGACAGAGAAGTGGTGGAAA | + |
Preference number: 2 (lower is better) Translates to: TQPNTVDTHQGGLAELPAFKDTY*TEKWWK Trigger: TTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAA...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CCA 90 bp | CAGCCCTTGGAAGTTGCAGAGGCCAGGGATGCTGAGACTCTTTCTGTAAAAGCTTTCAAAGACACATACTaGACAGAGAAGTGGTGGAAA | + |
Preference number: 2 (lower is better) Translates to: QPLEVAEARDAETLSVKAFKDTY*TEKWWK Trigger: TTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAA...AGCTTTTACAGAAAGAGTCTCAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CCA 72 bp | TGGCAGTGCAGAGTGAGCGCGGGTGGGCGGAGCACCTaGGGTTCCTTGTATAGGACCCCTTGCTCCCAGTCT | + |
Preference number: 3 (lower is better) Translates to: WQCRVSAGGRST*GSLYRTPCSQS Trigger: AGACTGGGAGCAAGGGGTCCTATACAAGGAACCCCAGGTGCTCCGCCCACCCGCGCTCACTCTGCACTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR TCA 72 bp | GCCCCAGTGGCAGTGGCTTCCTGTGGAAGGGGTTTGTaGCGGTCATCAGGGCCCTGTGCCTACAGCAGTACC | + |
Preference number: 3 (lower is better) Translates to: APVAVASCGRGL*RSSGPCAYSST Trigger: GGTACTGCTGTAGGCACAGGGCCCTGATGACCGTCACAAACCCCTTCCACAGGAAGCCACTGCCACTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CCA 72 bp | CAAACGAGTGGAGGCGCTCCCGGTTTTTATGAGTCCTaGTGTAACACAGCCGCTGGCCCTCGCCCCTCTGGG | + |
Preference number: 3 (lower is better) Translates to: QTSGGAPGFYES*CNTAAGPRPSG Trigger: CCCAGAGGGGCGAGGGCCAGCGGCTGTGTTACACCAGGACTCATAAAAACCGGGAGCGCCTCCACTCGTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR TCA 72 bp | AGTGATCAATCCCTACCACCAAGTGGCAGTGCAGAGTaGGCGCGGGTGGGCGGAGCACCTGGGGTTCCTTGT | + |
Preference number: 3 (lower is better) Translates to: SDQSLPPSGSAE*ARVGGAPGVPC Trigger: ACAAGGAACCCCAGGTGCTCCGCCCACCCGCGCTCACTCTGCACTGCCACTTGGTGGTAGGGATTGATCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR TCA 72 bp | TCAGGTGCAGCCCCTCCCTCAACCACTGCTGAGGGGTaGAAGCATGGCAGCCCTTGGAAGTTGCAGAGGCCA | + |
Preference number: 3 (lower is better) Translates to: SGAAPPSTTAEG*KHGSPWKLQRP Trigger: TGGCCTCTGCAACTTCCAAGGGCTGCCATGCTTTCACCCCTCAGCAGTGGTTGAGGGAGGGGCTGCACCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR GCA 72 bp | TGTGGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTaGCATGTAAACATTCACTTTCCAGGGGTCTGCAGC | + |
Preference number: 3 (lower is better) Translates to: CGQVPPKGWPSP*HVNIHFPGVCS Trigger: GCTGCAGACCCCTGGAAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR GCA 72 bp | ACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTaGTGTACTGAGGGTAGTCAGGCCCCAGTGGCAGTG | + |
Preference number: 3 (lower is better) Translates to: TRRPQHHKSAAA*CTEGSQAPVAV Trigger: CACTGCCACTGGGGCCTGACTACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CCA 72 bp | GAGGCTCCAGAGTGTGGGCAGGTGCCTCCCAAGGGGTaGCCCTCACCCTGCCATGTAAACATTCACTTTCCA | + |
Preference number: 3 (lower is better) Translates to: EAPECGQVPPKG*PSPCHVNIHFP Trigger: TGGAAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCCACACTCTGGAGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CAA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTAGCACCTGGGGTTCCTaGTATAGGACCCCTTGCTCC | + |
Preference number: 3 (lower is better) Translates to: STRRPQHHKSAAACCTEGSTWGS*YRTPCS Trigger: GGAGCAAGGGGTCCTATACAAGGAACCCCAGGTGCT...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CAA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAGGCAGCCCTTGGAAGTaGCAGAGGCCAGGGATGCTG | + |
Preference number: 3 (lower is better) Translates to: TQPNTVDTHQGGLAELPAGSPWK*QRPGML Trigger: CAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTGCC...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CAA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCAAGCACCTGGGGTTCCTaGTATAGGACCCCTTGCTCC | + |
Preference number: 3 (lower is better) Translates to: NTGLLQRHILDREVVERPSTWGS*YRTPCS Trigger: GGAGCAAGGGGTCCTATACAAGGAACCCCAGGTGCT...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR-3UTR CAA 90 bp | TTCACTTTCCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGCACCTGGGGTTCCTaGTATAGGACCCCTTGCTCC | + |
Preference number: 3 (lower is better) Translates to: FTFQGSAAYGMPESHGRKSTWGS*YRTPCS Trigger: GGAGCAAGGGGTCCTATACAAGGAACCCCAGGTGCT...CTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CCA 72 bp | CATGTAAACATTCACTTTCCAGGGGTCTGCAGCATATaGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCC | + |
Preference number: 3 (lower is better) Translates to: HVNIHFPGVCSI*NARVTWEKEGP Trigger: GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAATGTTTACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR GCA 72 bp | TTTATTGTTTATAAAACAATGGAAAGACACAATCATTaGTCAGGGAAAGGAAGGTATGTGGAAGGCTCCTCA | + |
Preference number: 3 (lower is better) Translates to: FIVYKTMERHNH*SGKGRYVEGSS Trigger: TGAGGAGCCTTCCACATACCTTCCTTTCCCTGAGCAATGATTGTGTCTTTCCATTGTTTTATAAACAATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGCACCCACAAAGGACGTaGGGATCACCCGCCAGCGGG | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMHPQRT*GSPASG Trigger: CCCGCTGGCGGGTGATCCTCACGTCCTTTGTGGGTG...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CAA 72 bp | AGAGTGAGCGCGGGTGGGCGGAGCACCTGGGGTTCCTaGTATAGGACCCCTTGCTCCCAGTCTCCGAGCAGT | + |
Preference number: 4 (lower is better) Translates to: RVSAGGRSTWGS*YRTPCSQSPSS Trigger: ACTGCTCGGAGACTGGGAGCAAGGGGTCCTATACAAGGAACCCCAGGTGCTCCGCCCACCCGCGCTCACTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCCACCCACAAAGGACGTaGGGATCACCCGCCAGCGGG | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPHPQRT*GSPASG Trigger: CCCGCTGGCGGGTGATCCTCACGTCCTTTGTGGGTG...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTCCTGGCACTGGGCCCTaGTGGTGGGAGTACAGCAGC | + |
Preference number: 4 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFPGTGP*WWEYSS Trigger: GCTGCTGTACTCCCACCATCAGGGCCCAGTGCCAGG...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTCCTGGCACTGGGCCCTaGTGGTGGGAGTACAGCAGC | + |
Preference number: 4 (lower is better) Translates to: TARKQSCAREAPECGQVPPGTGP*WWEYSS Trigger: GCTGCTGTACTCCCACCATCAGGGCCCAGTGCCAGG...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGTCTCGTGGTCCACACTaGCCCTGTGGCCTACCACCT | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMSRGPH*PCGLPP Trigger: AGGTGGTAGGCCACAGGGGCAGTGTGGACCACGAGA...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGCCTGAAGTCCTGGGCTaGGCTCAGCAGGAGGTTGCT | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMPEVLG*AQQEVA Trigger: AGCAACCTCCTGCTGAGCGCAGCCCAGGACTTCAGG...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGGGAAGCGAGGGTCCGTaGCCTTGGTCATGGATGCCA | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMGSEGP*PWSWMP Trigger: TGGCATCCATGACCAAGGCCACGGACCCTCGCTTCC...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTGGGCCTGCCTGGCACTaGGCCCTGATGGTGGGAGTA | + |
Preference number: 4 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFGPAWH*ALMVGV Trigger: TACTCCCACCATCAGGGCCCAGTGCCAGGCAGGCCC...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCCTCCCCTGTCGTGGTaGTCCACTCCTTGCCCAGGC | + |
Preference number: 4 (lower is better) Translates to: QQLASNPVLERLQSVGRCPPLSW*STPCPG Trigger: GCCTGGGCAAGGAGTGGACCACCACGACAGGGGAGG...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGTCACCTCCCCTGTCGTaGTGGTCCACTCCTTGCCCA | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMSPPLS*WSTPCP Trigger: TGGGCAAGGAGTGGACCACCACGACAGGGGAGGTGA...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCACCCACAAAGGACGTaGGGATCACCCGCCAGCGGG | + |
Preference number: 4 (lower is better) Translates to: STARKQSCAREAPECGQVHPQRT*GSPASG Trigger: CCCGCTGGCGGGTGATCCTCACGTCCTTTGTGGGTG...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGTCACAGAGATGTCCCTaGAGTCCTGGGCTGCGCTCA | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMSQRCP*SPGLRS Trigger: TGAGCGCAGCCCAGGACTTCAGGGACATCTCTGTGA...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGAAGGATGAGAAGCCGTaGGTGGGGATCAGAGTCCCC | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMKDEKP*VGIRVP Trigger: GGGGACTCTGATCCCCACCCACGGCTTCTCATCCTT...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGGATCACCCAGGGCACTaGTTTGGTGCCTTCGATCTG | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMDHPGH*FGAFDL Trigger: CAGATCGAAGGCACCAAAGCAGTGCCCTGGGTGATC...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCCTGAAGTCCTGGGCTaGGCTCAGCAGGAGGTTGCT | + |
Preference number: 4 (lower is better) Translates to: QQLASNPVLERLQSVGRCPEVLG*AQQEVA Trigger: AGCAACCTCCTGCTGAGCGCAGCCCAGGACTTCAGG...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTCCTCCCCTGTCGTGGTaGTCCACTCCTTGCCCAGGC | + |
Preference number: 4 (lower is better) Translates to: STRRPQHHKSAAACCTEGPPLSW*STPCPG Trigger: GCCTGGGCAAGGAGTGGACCACCACGACAGGGGAGG...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTTCACCTCCCCTGTCGTaGTGGTCCACTCCTTGCCCA | + |
Preference number: 4 (lower is better) Translates to: TARKQSCAREAPECGQVPSPPLS*WSTPCP Trigger: TGGGCAAGGAGTGGACCACCACGACAGGGGAGGTGA...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCTCCACACTGCCCCTGTaGCCTACCACCTTCACCCAC | + |
Preference number: 4 (lower is better) Translates to: QQLASNPVLERLQSVGRCSTLPL*PTTFTH Trigger: GTGGGTGAAGGTGGTAGGCCACAGGGGCAGTGTGGA...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGATGAGAAGCCGTGGGTaGGGATCAGAGTCCCCACTT | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMMRSRG*GSESPL Trigger: AAGTGGGGACTCTGATCCCCACCCACGGCTTCTCAT...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGGAAGACAATCAGGTCTaGGAGCTCCATGCCCCGCCC | + |
Preference number: 4 (lower is better) Translates to: STARKQSCAREAPECGQVEDNQV*ELHAPP Trigger: GGGCGGGGCATGGAGCTCTCAGACCTGATTGTCTTC...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCTCACAGAGATGTCCCTaGAGTCCTGGGCTGCGCTCA | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPSQRCP*SPGLRS Trigger: TGAGCGCAGCCCAGGACTTCAGGGACATCTCTGTGA...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGTCTCGTGGTCCACACTaGCCCTGTGGCCTACCACCT | + |
Preference number: 4 (lower is better) Translates to: STARKQSCAREAPECGQVSRGPH*PCGLPP Trigger: AGGTGGTAGGCCACAGGGGCAGTGTGGACCACGAGA...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCAGGAAGAACCAGCGCTaGAGTGTGTCGCTCCAGCAG | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPRKNQR*SVSLQQ Trigger: CTGCTGGAGCGACACACTGCAGCGCTGGTTCTTCCT...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCGGAGGTTGCTGCCCTTaGGTTCATCGTCCTTCTCGC | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPGGCCP*VHRPSR Trigger: GCGAGAAGGACGATGAACGCAAGGGCAGCAACCTCC...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGATCAGAGTCCCCACTTaGCTCACAGAGATGTCCCTG | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMIRVPT*LTEMSL Trigger: CAGGGACATCTCTGTGAGGCAAGTGGGGACTCTGAT...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTAAGGATGAGAAGCCGTaGGTGGGGATCAGAGTCCCC | + |
Preference number: 4 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFKDEKP*VGIRVP Trigger: GGGGACTCTGATCCCCACCCACGGCTTCTCATCCTT...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTTCGATCTGGTAGATaGCCCCTGTGCGGTCATCCA | + |
Preference number: 4 (lower is better) Translates to: QQLASNPVLERLQSVGRCLRSGR*PLCGHP Trigger: TGGATGACCGCACAGGGGTCATCTACCAGATCGAAG...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGTCACAGAGATGTCCCTaGAGTCCTGGGCTGCGCTCA | + |
Preference number: 4 (lower is better) Translates to: STARKQSCAREAPECGQVSQRCP*SPGLRS Trigger: TGAGCGCAGCCCAGGACTTCAGGGACATCTCTGTGA...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGCAAGTCAGCAATGACTaGGATTCGGTACCGAATCCC | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMQVSND*DSVPNP Trigger: GGGATTCGGTACCGAATCGCAGTCATTGCTGACTTG...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTTGGTGGTCCACTCCTTaGCCAGGCCGCCCACATACA | + |
Preference number: 4 (lower is better) Translates to: STRRPQHHKSAAACCTEGWWSTP*PGRPHT Trigger: TGTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCA...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAGGGCCTGCCTGGCACTaGGCCCTGATGGTGGGAGTA | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPAGPAWH*ALMVGV Trigger: TACTCCCACCATCAGGGCCCAGTGCCAGGCAGGCCC...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCCCCAGGGCACTGCTTTaGTGCCTTCGATCTGGTAGA | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPPRALL*CLRSGR Trigger: TCTACCAGATCGAAGGCACCAAAGCAGTGCCCTGGG...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTCCCAGGGCACTGCTTTaGTGCCTTCGATCTGGTAGA | + |
Preference number: 4 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFPRALL*CLRSGR Trigger: TCTACCAGATCGAAGGCACCAAAGCAGTGCCCTGGG...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CAA 72 bp | CCCCCAGTGCCTGGCTGGCAGGCCTACCTCAGACTATaGTGTGCTCCCAGGGTTAAGCTAGGGTTTAACACG | + |
Preference number: 4 (lower is better) Translates to: PPVPGWQAYLRL*CAPRVKLGFNT Trigger: CGTGTTAAACCCTAGCTTAACCCTGGGAGCACACAATAGTCTGAGGTAGGCCTGCCAGCCAGGCACTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTGATCCGGAGGGAGTaGATAGGCTCATTCCATTCC | + |
Preference number: 4 (lower is better) Translates to: QQLASNPVLERLQSVGRCLIRRE*IGSFHS Trigger: GGAATGGAATGAGCCTATGCACTCCCTCCGGATCAG...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTCTGATCCGGAGGGAGTaGATAGGCTCATTCCATTCC | + |
Preference number: 4 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFLIRRE*IGSFHS Trigger: GGAATGGAATGAGCCTATGCACTCCCTCCGGATCAG...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCCTGATCCGGAGGGAGTaGATAGGCTCATTCCATTCC | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPLIRRE*IGSFHS Trigger: GGAATGGAATGAGCCTATGCACTCCCTCCGGATCAG...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGTCTCGTGGTCCACACTaGCCCTGTGGCCTACCACCT | + |
Preference number: 4 (lower is better) Translates to: RPEAQKIAAAVINPYHQVSRGPH*PCGLPP Trigger: AGGTGGTAGGCCACAGGGGCAGTGTGGACCACGAGA...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTAGGAAGAACCAGCGCTaGAGTGTGTCGCTCCAGCAG | + |
Preference number: 4 (lower is better) Translates to: STRRPQHHKSAAACCTEGRKNQR*SVSLQQ Trigger: CTGCTGGAGCGACACACTGCAGCGCTGGTTCTTCCT...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCATCAGAGTCCCCACTTaGCTCACAGAGATGTCCCTG | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPIRVPT*LTEMSL Trigger: CAGGGACATCTCTGTGAGGCAAGTGGGGACTCTGAT...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGCTTCGTACTTCACAGTaGCGATCTTGGTCTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMLRTSQ*RSWSLE Trigger: TTCCAGAGACCAAGATCGGCACTGTGAAGTACGAAG...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGTCATTCCATTCCCGCTaGTCAAAGGGCTGGATGGGC | + |
Preference number: 4 (lower is better) Translates to: STARKQSCAREAPECGQVSFHSR*SKGWMG Trigger: GCCCATCCAGCCCTTTGACCAGCGGGAATGGAATGA...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | TTCACTTTCCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGGGGCCTGCCTGGCACTaGGCCCTGATGGTGGGAGTA | + |
Preference number: 4 (lower is better) Translates to: FTFQGSAAYGMPESHGRKGPAWH*ALMVGV Trigger: TACTCCCACCATCAGGGCCCAGTGCCAGGCAGGCCC...CTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGTCACCTCCCCTGTCGTaGTGGTCCACTCCTTGCCCA | + |
Preference number: 4 (lower is better) Translates to: RPEAQKIAAAVINPYHQVSPPLS*WSTPCP Trigger: TGGGCAAGGAGTGGACCACCACGACAGGGGAGGTGA...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTAGAGCCACGATGATCTaGTCATCCGTGTTGGGGATG | + |
Preference number: 4 (lower is better) Translates to: TARKQSCAREAPECGQVPRATMI*SSVLGM Trigger: CATCCCCAACACGGATGACCAGATCATCGTGGCTCT...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCTCACAGTGCCGATCTTaGTCTCTGGAAGCAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPSQCRS*SLEAGS Trigger: GCTTCCTGCTTCCAGAGACCAAGATCGGCACTGTGA...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAGAAGACAATCAGGTCTaGGAGCTCCATGCCCCGCCC | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPAEDNQV*ELHAPP Trigger: GGGCGGGGCATGGAGCTCTCAGACCTGATTGTCTTC...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | CAGCCCTTGGAAGTTGCAGAGGCCAGGGATGCTGAGACTCTTTCTGTAAAAGCTGAAGACAATCAGGTCTaGGAGCTCCATGCCCCGCCC | + |
Preference number: 4 (lower is better) Translates to: QPLEVAEARDAETLSVKAEDNQV*ELHAPP Trigger: GGGCGGGGCATGGAGCTCTCAGACCTGATTGTCTTC...AGCTTTTACAGAAAGAGTCTCAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTGATGAATTTGAAGGATaGGAAGCCGTGGGTGGGGAT | + |
Preference number: 4 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFDEFEG*EAVGGD Trigger: ATCCCCACCCACGGCTTCTCATCCTTCAAATTCATC...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCATGGTGGTCCACTCCTTaGCCAGGCCGCCCACATACA | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPAWWSTP*PGRPHT Trigger: TGTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCA...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCATGGTGGTCCACTCCTTaGCCAGGCCGCCCACATACA | + |
Preference number: 4 (lower is better) Translates to: NTGLLQRHILDREVVERPWWSTP*PGRPHT Trigger: TGTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCA...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCACCTGAAGTCCTGGGCTaGGCTCAGCAGGAGGTTGCT | + |
Preference number: 4 (lower is better) Translates to: NTGLLQRHILDREVVERPPEVLG*AQQEVA Trigger: AGCAACCTCCTGCTGAGCGCAGCCCAGGACTTCAGG...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAGGAAGCGAGGGTCCGTaGCCTTGGTCATGGATGCCA | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPAGSEGP*PWSWMP Trigger: TGGCATCCATGACCAAGGCCACGGACCCTCGCTTCC...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTTCAGGGCGTTGTAGCTaGACACCCAGTTCTCGTGGT | + |
Preference number: 4 (lower is better) Translates to: STRRPQHHKSAAACCTEGSGRCS*TPSSRG Trigger: ACCACGAGAACTGGGTGTCCAGCTACAACGCCCTGA...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTATGAGAAGCCGTGGGTaGGGATCAGAGTCCCCACTT | + |
Preference number: 4 (lower is better) Translates to: STRRPQHHKSAAACCTEGMRSRG*GSESPL Trigger: AAGTGGGGACTCTGATCCCCACCCACGGCTTCTCAT...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGAAGGATGAGAAGCCGTaGGTGGGGATCAGAGTCCCC | + |
Preference number: 4 (lower is better) Translates to: RPEAQKIAAAVINPYHQVKDEKP*VGIRVP Trigger: GGGGACTCTGATCCCCACCCACGGCTTCTCATCCTT...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCCAAGCCATTCAGCTTTaGAACCCTTCTCCACAGTTC | + |
Preference number: 4 (lower is better) Translates to: PGVCSIWNARVTWEKEGPQAIQL*NPSPQF Trigger: GAACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTG...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGGATGAATTTGAAGGATaGGAAGCCGTGGGTGGGGAT | + |
Preference number: 4 (lower is better) Translates to: STARKQSCAREAPECGQVDEFEG*EAVGGD Trigger: ATCCCCACCCACGGCTTCTCATCCTTCAAATTCATC...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCAAGTCAGCAATGACTaGGATTCGGTACCGAATCCC | + |
Preference number: 4 (lower is better) Translates to: STARKQSCAREAPECGQVQVSND*DSVPNP Trigger: GGGATTCGGTACCGAATCGCAGTCATTGCTGACTTG...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCAAGGAAGAACCAGCGCTaGAGTGTGTCGCTCCAGCAG | + |
Preference number: 4 (lower is better) Translates to: NTGLLQRHILDREVVERPRKNQR*SVSLQQ Trigger: CTGCTGGAGCGACACACTGCAGCGCTGGTTCTTCCT...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCAGGAGGTTGCTGCCCTTaGGTTCATCGTCCTTCTCGC | + |
Preference number: 4 (lower is better) Translates to: NTGLLQRHILDREVVERPGGCCP*VHRPSR Trigger: GCGAGAAGGACGATGAACGCAAGGGCAGCAACCTCC...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTTCGTACTTCACAGTaGCGATCTTGGTCTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: QQLASNPVLERLQSVGRCLRTSQ*RSWSLE Trigger: TTCCAGAGACCAAGATCGGCACTGTGAAGTACGAAG...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCACAAGTGTTTTCTTCCTaGGCCCTGGACCCCGTGTCC | + |
Preference number: 4 (lower is better) Translates to: NTGLLQRHILDREVVERPQVFSS*ALDPVS Trigger: GGACACGGGGTCCAGGGCCCAGGAAGAAAACACTTG...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCACAAGTGTTTTCTTCCTaGGCCCTGGACCCCGTGTCC | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPAQVFSS*ALDPVS Trigger: GGACACGGGGTCCAGGGCCCAGGAAGAAAACACTTG...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGTCAGGGCGTTGTAGCTaGACACCCAGTTCTCGTGGT | + |
Preference number: 4 (lower is better) Translates to: RPEAQKIAAAVINPYHQVSGRCS*TPSSRG Trigger: ACCACGAGAACTGGGTGTCCAGCTACAACGCCCTGA...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCACTTCGATCTGGTAGATaGCCCCTGTGCGGTCATCCA | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPALRSGR*PLCGHP Trigger: TGGATGACCGCACAGGGGTCATCTACCAGATCGAAG...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAGATCACCCAGGGCACTaGTTTGGTGCCTTCGATCTG | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPADHPGH*FGAFDL Trigger: CAGATCGAAGGCACCAAAGCAGTGCCCTGGGTGATC...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCAGATCACCCAGGGCACTaGTTTGGTGCCTTCGATCTG | + |
Preference number: 4 (lower is better) Translates to: NTGLLQRHILDREVVERPDHPGH*FGAFDL Trigger: CAGATCGAAGGCACCAAAGCAGTGCCCTGGGTGATC...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCATCATTCCATTCCCGCTaGTCAAAGGGCTGGATGGGC | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPASFHSR*SKGWMG Trigger: GCCCATCCAGCCCTTTGACCAGCGGGAATGGAATGA...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | TTCACTTTCCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGCAAGTGTTTTCTTCCTaGGCCCTGGACCCCGTGTCC | + |
Preference number: 4 (lower is better) Translates to: FTFQGSAAYGMPESHGRKQVFSS*ALDPVS Trigger: GGACACGGGGTCCAGGGCCCAGGAAGAAAACACTTG...CTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CAGCCCTTGGAAGTTGCAGAGGCCAGGGATGCTGAGACTCTTTCTGTAAAAGCTCCCAGGGCACTGCTTTaGTGCCTTCGATCTGGTAGA | + |
Preference number: 4 (lower is better) Translates to: QPLEVAEARDAETLSVKAPRALL*CLRSGR Trigger: TCTACCAGATCGAAGGCACCAAAGCAGTGCCCTGGG...AGCTTTTACAGAAAGAGTCTCAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | CAGCCCTTGGAAGTTGCAGAGGCCAGGGATGCTGAGACTCTTTCTGTAAAAGCTTCAGGGCGTTGTAGCTaGACACCCAGTTCTCGTGGT | + |
Preference number: 4 (lower is better) Translates to: QPLEVAEARDAETLSVKASGRCS*TPSSRG Trigger: ACCACGAGAACTGGGTGTCCAGCTACAACGCCCTGA...AGCTTTTACAGAAAGAGTCTCAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGTCACAGTGCCGATCTTaGTCTCTGGAAGCAGGAAGC | + |
Preference number: 4 (lower is better) Translates to: RPEAQKIAAAVINPYHQVSQCRS*SLEAGS Trigger: GCTTCCTGCTTCCAGAGACCAAGATCGGCACTGTGA...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTAGTAGAGTTTCCCATTaGAGACAATCAGGTCTGAGA | + |
Preference number: 4 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFSRVSH*RQSGLR Trigger: TCTCAGACCTGATTGTCTTCAATGGGAAACTCTACT...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTAGTAGAGTTTCCCATTaGAGACAATCAGGTCTGAGA | + |
Preference number: 4 (lower is better) Translates to: TARKQSCAREAPECGQVPSRVSH*RQSGLR Trigger: TCTCAGACCTGATTGTCTTCAATGGGAAACTCTACT...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGGATGAATTTGAAGGATaGGAAGCCGTGGGTGGGGAT | + |
Preference number: 4 (lower is better) Translates to: RPEAQKIAAAVINPYHQVDEFEG*EAVGGD Trigger: ATCCCCACCCACGGCTTCTCATCCTTCAAATTCATC...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | TTCACTTTCCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGTCATTCCATTCCCGCTaGTCAAAGGGCTGGATGGGC | + |
Preference number: 4 (lower is better) Translates to: FTFQGSAAYGMPESHGRKSFHSR*SKGWMG Trigger: GCCCATCCAGCCCTTTGACCAGCGGGAATGGAATGA...CTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | TTCACTTTCCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGATGAGAAGCCGTGGGTaGGGATCAGAGTCCCCACTT | + |
Preference number: 4 (lower is better) Translates to: FTFQGSAAYGMPESHGRKMRSRG*GSESPL Trigger: AAGTGGGGACTCTGATCCCCACCCACGGCTTCTCAT...CTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CCA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCAAGAGCCACGATGATCTaGTCATCCGTGTTGGGGATG | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGGLAELPARATMI*SSVLGM Trigger: CATCCCCAACACGGATGACCAGATCATCGTGGCTCT...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR GCA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGCTTCGTACTTCACAGTaGCGATCTTGGTCTCTGGAA | + |
Preference number: 4 (lower is better) Translates to: RPEAQKIAAAVINPYHQVLRTSQ*RSWSLE Trigger: TTCCAGAGACCAAGATCGGCACTGTGAAGTACGAAG...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CAA 72 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTaGGCTGAGCTCCCAGCACAACAGTACACGAAGACC | + |
Preference number: 4 (lower is better) Translates to: TQPNTVDTHQGG*AELPAQQYTKT Trigger: GGTCTTCGTGTACTGTTGTGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | CAGCCCTTGGAAGTTGCAGAGGCCAGGGATGCTGAGACTCTTTCTGTAAAAGCTCAAGCCATTCAGCTTTaGAACCCTTCTCCACAGTTC | + |
Preference number: 4 (lower is better) Translates to: QPLEVAEARDAETLSVKAQAIQL*NPSPQF Trigger: GAACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTG...AGCTTTTACAGAAAGAGTCTCAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CAA 72 bp | ATGACCTCTGAGCCTGACTCTGCTGCCTTGGCTCTTTaGAACATGGACAGAACAGGACAGCAGAAAACAGTG | + |
Preference number: 4 (lower is better) Translates to: MTSEPDSAALAL*NMDRTGQQKTV Trigger: CACTGTTTTCTGCTGTCCTGTTCTGTCCATGTTCAAAAGAGCCAAGGCAGCAGAGTCAGGCTCAGAGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
3UTR CAA 72 bp | TCATCTTTCAGCTCAGAATCACACAACCGAACACAGTaGACACACATCAAGGAGGTTTGGCTGAGCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: SSFSSESHNRTQ*THIKEVWLSSQ Trigger: CTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGTGATTCTGAGCTGAAAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR TCA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCAAGTAGAGTTTCCCATTaGAGACAATCAGGTCTGAGA | + |
Preference number: 4 (lower is better) Translates to: NTGLLQRHILDREVVERPSRVSH*RQSGLR Trigger: TCTCAGACCTGATTGTCTTCAATGGGAAACTCTACT...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS TCA 90 bp | AGAACCAGCGCTGCAGTGTGTCGCTCCAGCAGGCGGACTCGTGAATaGGGTAGCCTGGTGGTCGGATCCCGGCGGCTGCTCTCAGGGCGT | + |
Preference number: 5 (lower is better) Translates to: RTSAAVCRSSRRTRE*GSLVVGSRRLLSGR Trigger: ACGCCCTGAGAGCAGCCGCCGGGATCCGACCACCAGGCTACCTCATTCACGAGTCCGCCTGCTGGAGCGACACACTGCAGCGCTGGTTCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS-3UTR CAA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGGTGGTGGTCCACTCCTaGCCCAGGCCGCCCACATAC | + |
Preference number: 5 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMVVVHS*PRPPTY Trigger: GTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCAC...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTGTGGTGGTCCACTCCTaGCCCAGGCCGCCCACATAC | + |
Preference number: 5 (lower is better) Translates to: TARKQSCAREAPECGQVPVVVHS*PRPPTY Trigger: GTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCAC...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS GCA 90 bp | CAGGGTTCTCGTTCATCACCTCCCCTGTCGTGGTGGTCCACTCCTTaGCCAGGCCGCCCACATACAGGTGTTCGTCCTTCACAGCAAGCC | + |
Preference number: 5 (lower is better) Translates to: QGSRSSPPLSWWSTP*PGRPHTGVRPSQQA Trigger: GGCTTGCTGTGAAGGACGAACACCTGTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCACGACAGGGGAGGTGATGAACGAGAACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS CCA 90 bp | GGGATCAGAGTCCCCACTTGCCTCACAGAGATGTCCCTGAAGTCCTaGGCTGCGCTCAGCAGGAGGTTGCTGCCCTTGCGTTCATCGTCC | + |
Preference number: 5 (lower is better) Translates to: GIRVPTCLTEMSLKS*AALSRRLLPLRSSS Trigger: GGACGATGAACGCAAGGGCAGCAACCTCCTGCTGAGCGCAGCCCAGGACTTCAGGGACATCTCTGTGAGGCAAGTGGGGACTCTGATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS-3UTR CAA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTCGAGGGTCCGTGGCCTaGGTCATGGATGCCAGCACA | + |
Preference number: 5 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFRGSVA*VMDAST Trigger: TGTGCTGGCATCCATGACCAAGGCCACGGACCCTCG...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTGCGCTCAGCAGGAGGTaGCTGCCCTTGCGTTCATCG | + |
Preference number: 5 (lower is better) Translates to: TARKQSCAREAPECGQVPALSRR*LPLRSS Trigger: CGATGAACGCAAGGGCAGCAACCTCCTGCTGAGCGC...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS GCA 90 bp | CAGAGTCCCCACTTGCCTCACAGAGATGTCCCTGAAGTCCTGGGCTaGGCTCAGCAGGAGGTTGCTGCCCTTGCGTTCATCGTCCTTCTC | + |
Preference number: 5 (lower is better) Translates to: QSPHLPHRDVPEVLG*AQQEVAALAFIVLL Trigger: GAGAAGGACGATGAACGCAAGGGCAGCAACCTCCTGCTGAGCGCAGCCCAGGACTTCAGGGACATCTCTGTGAGGCAAGTGGGGACTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS-3UTR CAA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCGAGGGTCCGTGGCCTaGGTCATGGATGCCAGCACA | + |
Preference number: 5 (lower is better) Translates to: STARKQSCAREAPECGQVRGSVA*VMDAST Trigger: TGTGCTGGCATCCATGACCAAGGCCACGGACCCTCG...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | CAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCAGGAGGTTGCTGCCCTaGCGTTCATCGTCCTTCTCG | + |
Preference number: 5 (lower is better) Translates to: QQLASNPVLERLQSVGRCRRLLP*RSSSFS Trigger: CGAGAAGGACGATGAACGCAAGGGCAGCAACCTCCT...GCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS GCA 90 bp | AATTTGAAGGATGAGAAGCCGTGGGTGGGGATCAGAGTCCCCACTTaGCTCACAGAGATGTCCCTGAAGTCCTGGGCTGCGCTCAGCAGG | + |
Preference number: 5 (lower is better) Translates to: NLKDEKPWVGIRVPT*LTEMSLKSWAALSR Trigger: CCTGCTGAGCGCAGCCCAGGACTTCAGGGACATCTCTGTGAGGCAAGTGGGGACTCTGATCCCCACCCACGGCTTCTCATCCTTCAAATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS-3UTR CAA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTGATCAGAGTCCCCACTaGCCTCACAGAGATGTCCCT | + |
Preference number: 5 (lower is better) Translates to: TARKQSCAREAPECGQVPDQSPH*PHRDVP Trigger: AGGGACATCTCTGTGAGGCAAGTGGGGACTCTGATC...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCGATCAGAGTCCCCACTaGCCTCACAGAGATGTCCCT | + |
Preference number: 5 (lower is better) Translates to: PGVCSIWNARVTWEKEGPDQSPH*PHRDVP Trigger: AGGGACATCTCTGTGAGGCAAGTGGGGACTCTGATC...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGGTGTTGGGGATGAATTaGAAGGATGAGAAGCCGTGG | + |
Preference number: 5 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMVLGMN*KDEKPW Trigger: CCACGGCTTCTCATCCTTCAAATTCATCCCCAACAC...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCACGAGGGTCCGTGGCCTaGGTCATGGATGCCAGCACA | + |
Preference number: 5 (lower is better) Translates to: TQPNTVDTHQGGLAELPARGSVA*VMDAST Trigger: TGTGCTGGCATCCATGACCAAGGCCACGGACCCTCG...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGTGGCTGAGCCTCCAATaGTGCGCATTGTGGGTGGGG | + |
Preference number: 5 (lower is better) Translates to: RPEAQKIAAAVINPYHQVWLSLQ*CALWVG Trigger: CCCCACCCACAATGCGCACAATTGGAGGCTCAGCCA...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | CTCACGTCGCCACTGTGGGTGTGGGGACAAGTCCCTCGCTCCTGGAAGTGCATGGCAAGCCATTCAGCTTaGAAACCCTTCTCCACAGTT | + |
Preference number: 5 (lower is better) Translates to: LTSPLWVWGQVPRSWKCMASHSA*KPFSTV Trigger: AACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTGC...CATGCACTTCCAGGAGCGAGGGACTTGTCCCCACACCCACAGTGGCGACGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | TTCACTTTCCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGGTGGTGGTCCACTCCTaGCCCAGGCCGCCCACATAC | + |
Preference number: 5 (lower is better) Translates to: FTFQGSAAYGMPESHGRKVVVHS*PRPPTY Trigger: GTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCAC...CTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | AACACGGGGCTGCTTCAAAGACACATACTGGACAGAGAAGTGGTGGAAAGGCCAGCGCTCAGCAGGAGGTaGCTGCCCTTGCGTTCATCG | + |
Preference number: 5 (lower is better) Translates to: NTGLLQRHILDREVVERPALSRR*LPLRSS Trigger: CGATGAACGCAAGGGCAGCAACCTCCTGCTGAGCGC...TGGCCTTTCCACCACTTCTCTGTCCAGTATGTGTCTTTGAAGCAGCCCCGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | ACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGCCTTTCACAGTGCCGATCTaGGTCTCTGGAAGCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: TARKQSCAREAPECGQVPFTVPI*VSGSRK Trigger: CTTCCTGCTTCCAGAGACCAAGATCGGCACTGTGAA...AGGCACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS GCA 90 bp | CTTCTCCACAGTTCCATCGCCATCAGAAAGGATCACCCAGGGCACTaGTTTGGTGCCTTCGATCTGGTAGATGACCCCTGTGCGGTCATC | + |
Preference number: 5 (lower is better) Translates to: LLHSSIAIRKDHPGH*FGAFDLVDDPCAVI Trigger: GATGACCGCACAGGGGTCATCTACCAGATCGAAGGCACCAAAGCAGTGCCCTGGGTGATCCTTTCTGATGGCGATGGAACTGTGGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS-3UTR CAA 90 bp | ACACAACCGAACACAGTTGACACACATCAAGGAGGTTTGGCTGAGCTCCCAGCATGGCTGAGCCTCCAATaGTGCGCATTGTGGGTGGGG | + |
Preference number: 5 (lower is better) Translates to: TQPNTVDTHQGGLAELPAWLSLQ*CALWVG Trigger: CCCCACCCACAATGCGCACAATTGGAGGCTCAGCCA...TGCTGGGAGCTCAGCCAAACCTCCTTGATGTGTGTCAACTGTGTTCGGTTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGAGGAGGTTGCTGCCCTaGCGTTCATCGTCCTTCTCG | + |
Preference number: 5 (lower is better) Translates to: RPEAQKIAAAVINPYHQVRRLLP*RSSSFS Trigger: CGAGAAGGACGATGAACGCAAGGGCAGCAACCTCCT...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | TCAACAGCTCGCAAGCAATCCTGTGCTAGAGAGGCTCCAGAGTGTGGGCAGGTGGTGTTGGGGATGAATTaGAAGGATGAGAAGCCGTGG | + |
Preference number: 5 (lower is better) Translates to: STARKQSCAREAPECGQVVLGMN*KDEKPW Trigger: CCACGGCTTCTCATCCTTCAAATTCATCCCCAACAC...CACCTGCCCACACTCTGGAGCCTCTCTAGCACAGGATTGCTTGCGAGCTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS CCA 90 bp | GATGAACTCTATTCCTTCGTACTTCACAGTGCCGATCTTGGTCTCTaGAAGCAGGAAGCGGCCGTCCAGCGTGAAGGCCATGACATAGGT | + |
Preference number: 5 (lower is better) Translates to: DELYSFVLHSADLGL*KQEAAVQREGHDIG Trigger: ACCTATGTCATGGCCTTCACGCTGGACGGCCGCTTCCTGCTTCCAGAGACCAAGATCGGCACTGTGAAGTACGAAGGAATAGAGTTCATC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS-3UTR CAA 90 bp | CCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGAGGGCCCCATCTGGTCATCCGTGTaGGGGATGAATTTGAAGGAT | + |
Preference number: 5 (lower is better) Translates to: PGVCSIWNARVTWEKEGPIWSSV*GMNLKD Trigger: ATCCTTCAAATTCATCCCCAACACGGATGACCAGAT...GGGGCCCTCTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | GGGCAGGTGCCTCCCAAGGGGTGGCCCTCACCCTGCCATGTAAACATTCACTTTATCTGGTCATCCGTGTaGGGGATGAATTTGAAGGAT | + |
Preference number: 5 (lower is better) Translates to: GQVPPKGWPSPCHVNIHFIWSSV*GMNLKD Trigger: ATCCTTCAAATTCATCCCCAACACGGATGACCAGAT...AAAGTGAATGTTTACATGGCAGGGTGAGGGCCACCCCTTGGGAGGCACCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS TCA 90 bp | CGCCCACATACAGGTGTTCGTCCTTCACAGCAAGCCATTCAGCTTTaGAACCCTTCTCCACAGTTCCATCGCCATCAGAAAGGATCACCC | + |
Preference number: 5 (lower is better) Translates to: RPHTGVRPSQQAIQL*NPSPQFHRHQKGSP Trigger: GGGTGATCCTTTCTGATGGCGATGGAACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTGCTGTGAAGGACGAACACCTGTATGTGGGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000164927.2 |
||
CDS-3UTR CAA 90 bp | AGTACACGAAGACCTCAGCACCACAAGTCAGCAGCAGCCTGCTGTACTGAGGGTGCAAGCCATTCAGCTTaGAAACCCTTCTCCACAGTT | + |
Preference number: 5 (lower is better) Translates to: STRRPQHHKSAAACCTEGASHSA*KPFSTV Trigger: AACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTGC...ACCCTCAGTACAGCAGGCTGCTGCTGACTTGTGGTGCTGAGGTCTTCGTGTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | AGGCCAGAGGCTCAGAAGATAGCTGCAGCAGTGATCAATCCCTACCACCAAGTGGTGTTGGGGATGAATTaGAAGGATGAGAAGCCGTGG | + |
Preference number: 5 (lower is better) Translates to: RPEAQKIAAAVINPYHQVVLGMN*KDEKPW Trigger: CCACGGCTTCTCATCCTTCAAATTCATCCCCAACAC...CACTTGGTGGTAGGGATTGATCACTGCTGCAGCTATCTTCTGAGCCTCTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | TTCACTTTCCAGGGGTCTGCAGCATATGGAATGCCAGAGTCACATGGGAGAAAGTTCACAGTGCCGATCTaGGTCTCTGGAAGCAGGAAG | + |
Preference number: 5 (lower is better) Translates to: FTFQGSAAYGMPESHGRKFTVPI*VSGSRK Trigger: CTTCCTGCTTCCAGAGACCAAGATCGGCACTGTGAA...CTTTCTCCCATGTGACTCTGGCATTCCATATGCTGCAGACCCCTGGAAAGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS-3UTR CAA 90 bp | CAGCCCTTGGAAGTTGCAGAGGCCAGGGATGCTGAGACTCTTTCTGTAAAAGCTGCAAGCCATTCAGCTTaGAAACCCTTCTCCACAGTT | + |
Preference number: 5 (lower is better) Translates to: QPLEVAEARDAETLSVKAASHSA*KPFSTV Trigger: AACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTGC...AGCTTTTACAGAAAGAGTCTCAGCATCCCTGGCCTCTGCAACTTCCAAGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106288.8 |
||
CDS TCA 90 bp | CGCCCACATACAGGTGTTCGTCCTTCACAGCAAGCCATTCAGCTTTaGAACCTGCTACACATGAAGCTAATATCAGATTCTGTTCCCAGG | + |
Preference number: 5 (lower is better) Translates to: RPHTGVRPSQQAIQL*NLLHMKLISDSVPR Trigger: CCTGGGAACAGAATCTGATATTAGCTTCATGTGTAGCAGGTTTCAAAGCTGAATGGCTTGCTGTGAAGGACGAACACCTGTATGTGGGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106289.9 |
||
CDS TCA 72 bp | GCTGCAGTGTGTCGCTCCAGCAGGCGGACTCGTGAATaGGGTAGCCTGGTGGTCGGATCCCGGCGGCTGCTC | + |
Preference number: 6 (lower is better) Translates to: AAVCRSSRRTRE*GSLVVGSRRLL Trigger: GAGCAGCCGCCGGGATCCGACCACCAGGCTACCTCATTCACGAGTCCGCCTGCTGGAGCGACACACTGCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS TCA 72 bp | ACTCTAGGACCCCGTGGTCTTTATCCCACTCCACGCTaGCCCTGTCCCCGCTGTCCGACAGGGTCAGGTAGC | + |
Preference number: 6 (lower is better) Translates to: TLGPRGLYPTPR*PCPRCPTGSGS Trigger: GCTACCTGACCCTGTCGGACAGCGGGGACAGGGTCAGCGTGGAGTGGGATAAAGACCACGGGGTCCTAGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS CCA 72 bp | GTCCCCACTTGCCTCACAGAGATGTCCCTGAAGTCCTaGGCTGCGCTCAGCAGGAGGTTGCTGCCCTTGCGT | + |
Preference number: 6 (lower is better) Translates to: VPTCLTEMSLKS*AALSRRLLPLR Trigger: ACGCAAGGGCAGCAACCTCCTGCTGAGCGCAGCCCAGGACTTCAGGGACATCTCTGTGAGGCAAGTGGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS GCA 72 bp | CGTTCATCACCTCCCCTGTCGTGGTGGTCCACTCCTTaGCCAGGCCGCCCACATACAGGTGTTCGTCCTTCA | + |
Preference number: 6 (lower is better) Translates to: RSSPPLSWWSTP*PGRPHTGVRPS Trigger: TGAAGGACGAACACCTGTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCACGACAGGGGAGGTGATGAACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS GCA 72 bp | GATGAGAAGCCGTGGGTGGGGATCAGAGTCCCCACTTaGCTCACAGAGATGTCCCTGAAGTCCTGGGCTGCG | + |
Preference number: 6 (lower is better) Translates to: DEKPWVGIRVPT*LTEMSLKSWAA Trigger: CGCAGCCCAGGACTTCAGGGACATCTCTGTGAGGCAAGTGGGGACTCTGATCCCCACCCACGGCTTCTCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS CAA 72 bp | TCGTTCATCACCTCCCCTGTCGTGGTGGTCCACTCCTaGCCCAGGCCGCCCACATACAGGTGTTCGTCCTTC | + |
Preference number: 6 (lower is better) Translates to: SFITSPVVVVHS*PRPPTYRCSSF Trigger: GAAGGACGAACACCTGTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCACGACAGGGGAGGTGATGAACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS CAA 90 bp | TCAGGGTTCTCGTTCATCACCTCCCCTGTCGTGGTGGTCCACTCCTaGCCCAGGCCGCCCACATACAGGTGTTCGTCCTTCACAGCAAGC | + |
Preference number: 6 (lower is better) Translates to: SGFSFITSPVVVVHS*PRPPTYRCSSFTAS Trigger: GCTTGCTGTGAAGGACGAACACCTGTATGTGGGCGGCCTGGGCAAGGAGTGGACCACCACGACAGGGGAGGTGATGAACGAGAACCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS GCA 72 bp | CACTTGCCTCACAGAGATGTCCCTGAAGTCCTGGGCTaGGCTCAGCAGGAGGTTGCTGCCCTTGCGTTCATC | + |
Preference number: 6 (lower is better) Translates to: HLPHRDVPEVLG*AQQEVAALAFI Trigger: GATGAACGCAAGGGCAGCAACCTCCTGCTGAGCGCAGCCCAGGACTTCAGGGACATCTCTGTGAGGCAAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS TCA 72 bp | CCCAGGGCACTGCTTTGGTGCCTTCGATCTGGTAGATaGCCCCTGTGCGGTCATCCACGGAGTAGAGTTTCC | + |
Preference number: 6 (lower is better) Translates to: PRALLWCLRSGR*PLCGHPRSRVS Trigger: GGAAACTCTACTCCGTGGATGACCGCACAGGGGTCATCTACCAGATCGAAGGCACCAAAGCAGTGCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS CCA 72 bp | TATTCCTTCGTACTTCACAGTGCCGATCTTGGTCTCTaGAAGCAGGAAGCGGCCGTCCAGCGTGAAGGCCAT | + |
Preference number: 6 (lower is better) Translates to: YSFVLHSADLGL*KQEAAVQREGH Trigger: ATGGCCTTCACGCTGGACGGCCGCTTCCTGCTTCCAGAGACCAAGATCGGCACTGTGAAGTACGAAGGAATA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS GCA 72 bp | AGTTCCATCGCCATCAGAAAGGATCACCCAGGGCACTaGTTTGGTGCCTTCGATCTGGTAGATGACCCCTGT | + |
Preference number: 6 (lower is better) Translates to: SSIAIRKDHPGH*FGAFDLVDDPC Trigger: ACAGGGGTCATCTACCAGATCGAAGGCACCAAAGCAGTGCCCTGGGTGATCCTTTCTGATGGCGATGGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS CAA 90 bp | CCGCCCACATACAGGTGTTCGTCCTTCACAGCAAGCCATTCAGCTTaGAAACCCTTCTCCACAGTTCCATCGCCATCAGAAAGGATCACC | + |
Preference number: 6 (lower is better) Translates to: PPTYRCSSFTASHSA*KPFSTVPSPSERIT Trigger: GGTGATCCTTTCTGATGGCGATGGAACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTGCTGTGAAGGACGAACACCTGTATGTGGGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000164927.2 |
||
CDS CAA 90 bp | TTGTCCTCTTCCGACTTGAGAGCCACGATGATCTGGTCATCCGTGTaGGGGATGAATTTGAAGGATGAGAAGCCGTGGGTGGGGATCAGA | + |
Preference number: 6 (lower is better) Translates to: LSSSDLRATMIWSSV*GMNLKDEKPWVGIR Trigger: TCTGATCCCCACCCACGGCTTCTCATCCTTCAAATTCATCCCCAACACGGATGACCAGATCATCGTGGCTCTCAAGTCGGAAGAGGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000106289.9 ENSMUST00000164927.2 |
||
CDS TCA 72 bp | ACAGGTGTTCGTCCTTCACAGCAAGCCATTCAGCTTTaGAACCCTTCTCCACAGTTCCATCGCCATCAGAAA | + |
Preference number: 6 (lower is better) Translates to: TGVRPSQQAIQL*NPSPQFHRHQK Trigger: TTTCTGATGGCGATGGAACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTGCTGTGAAGGACGAACACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000164927.2 |
||
CDS GCA 72 bp | AAGCTAATATCAGATTCTGTTCCCAGGAGTCATTGCTaGTCAGCATACAGACCCTTGTACTGGGTGGGCTCA | + |
Preference number: 6 (lower is better) Translates to: KLISDSVPRSHC*SAYRPLYWVGS Trigger: TGAGCCCACCCAGTACAAGGGTCTGTATGCTGAGCAGCAATGACTCCTGGGAACAGAATCTGATATTAGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106289.9 |
||
CDS CAA 72 bp | TACAGGTGTTCGTCCTTCACAGCAAGCCATTCAGCTTaGAAACCCTTCTCCACAGTTCCATCGCCATCAGAA | + |
Preference number: 6 (lower is better) Translates to: YRCSSFTASHSA*KPFSTVPSPSE Trigger: TTCTGATGGCGATGGAACTGTGGAGAAGGGTTTCAAAGCTGAATGGCTTGCTGTGAAGGACGAACACCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000017620.10 ENSMUST00000092378.10 ENSMUST00000106287.8 ENSMUST00000106288.8 ENSMUST00000164927.2 |
||
CDS CAA 90 bp | CCGCCCACATACAGGTGTTCGTCCTTCACAGCAAGCCATTCAGCTTaGAAACCTGCTACACATGAAGCTAATATCAGATTCTGTTCCCAG | + |
Preference number: 6 (lower is better) Translates to: PPTYRCSSFTASHSA*KPATHEANIRFCSQ Trigger: CTGGGAACAGAATCTGATATTAGCTTCATGTGTAGCAGGTTTCAAAGCTGAATGGCTTGCTGTGAAGGACGAACACCTGTATGTGGGCGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106289.9 |
||
CDS TCA 72 bp | ACAGGTGTTCGTCCTTCACAGCAAGCCATTCAGCTTTaGAACCTGCTACACATGAAGCTAATATCAGATTCT | + |
Preference number: 6 (lower is better) Translates to: TGVRPSQQAIQL*NLLHMKLISDS Trigger: AGAATCTGATATTAGCTTCATGTGTAGCAGGTTTCAAAGCTGAATGGCTTGCTGTGAAGGACGAACACCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106289.9 |
||
CDS CAA 72 bp | TACAGGTGTTCGTCCTTCACAGCAAGCCATTCAGCTTaGAAACCTGCTACACATGAAGCTAATATCAGATTC | + |
Preference number: 6 (lower is better) Translates to: YRCSSFTASHSA*KPATHEANIRF Trigger: GAATCTGATATTAGCTTCATGTGTAGCAGGTTTCAAAGCTGAATGGCTTGCTGTGAAGGACGAACACCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106289.9 |