Pregenerated sensors for CAND1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020114Ensembl transcript IDs: ENSMUST00000020315.13, ENSMUST00000126373.2
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGCACATTCCTAAGAATCGCCACCAGCTTGCTCCCTCGCACTACTaGCTTCTAGGAACCGCCTGGGAGAACTGGCAGGCAGGCAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: QHIPKNRHQLAPSHY*LLGTAWENWQAGRS Trigger: GCTTCTGCCTGCCTGCCAGTTCTCCCAGGCGGTTCCTAGAAGTCAGTAGTGCGAGGGAGCAAGCTGGTGGCGATTCTTAGGAATGTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR GCA 90 bp | CTCTGGACACTTCTCTCCCGTGGCTGTGGTCAACCTGTCGTTCAGTaGATTGTGCGGTCACATGGAATGGTCCTCACGGGGCGCACACAT | + |
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Preference number: 1 (lower is better) Translates to: LWTLLSRGCGQPVVQ*IVRSHGMVLTGRTH Trigger: ATGTGTGCGCCCCGTGAGGACCATTCCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGAGAGAAGTGTCCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | GCTGCTTCCAGTCCAGATGTGGACCACATCACCACAGCATCAGTGTaGCTCAGCACTGGAGCCCCTGAGCCTTCTTCTGATGGCCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: AASSPDVDHITTASV*LSTGAPEPSSDGLC Trigger: ACACAGGCCATCAGAAGAAGGCTCAGGGGCTCCAGTGCTGAGCCACACTGATGCTGTGGTGATGTGGTCCACATCTGGACTGGAAGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | TTCCTAGCATGTGTGGTGGTGGGTCTGCTGCTTCCAGTCCAGATGTaGACCACATCACCACAGCATCAGTGTGGCTCAGCACTGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: FLACVVVGLLLPVQM*TTSPQHQCGSALEP Trigger: GGGCTCCAGTGCTGAGCCACACTGATGCTGTGGTGATGTGGTCCACATCTGGACTGGAAGCAGCAGACCCACCACCACACATGCTAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | AAAGTGGAACATCGTGAAGCTCTGGACACTTCTCTCCCGTGGCTGTaGTCAACCTGTCGTTCAGTGCATTGTGCGGTCACATGGAATGGT | + |
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Preference number: 1 (lower is better) Translates to: KVEHREALDTSLPWL*STCRSVHCAVTWNG Trigger: ACCATTCCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGAGAGAAGTGTCCAGAGCTTCACGATGTTCCACTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | GAAAGTAAAGTGGAACATCGTGAAGCTCTGGACACTTCTCTCCCGTaGCTGTGGTCAACCTGTCGTTCAGTGCATTGTGCGGTCACATGG | + |
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Preference number: 1 (lower is better) Translates to: ESKVEHREALDTSLP*LWSTCRSVHCAVTW Trigger: CCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGAGAGAAGTGTCCAGAGCTTCACGATGTTCCACTTTACTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | ACAAACTTCCCGGGAAGGAAAGTAAAGTGGAACATCGTGAAGCTCTaGACACTTCTCTCCCGTGGCTGTGGTCAACCTGTCGTTCAGTGC | + |
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Preference number: 1 (lower is better) Translates to: TNFPGRKVKWNIVKL*TLLSRGCGQPVVQC Trigger: GCACTGAACGACAGGTTGACCACAGCCACGGGAGAGAAGTGTCCAGAGCTTCACGATGTTCCACTTTACTTTCCTTCCCGGGAAGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR TCA 90 bp | GGTTGGCATCACTGTACAATCAAAGCCAACAGCCACAGTCTGCTCTaGCCGGAACAAGCAATTGTGCATTCGACCTTACGGCAGTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: GWHHCTIKANSHSLL*PEQAIVHSTLRQSN Trigger: GTTGGACTGCCGTAAGGTCGAATGCACAATTGCTTGTTCCGGTCAGAGCAGACTGTGGCTGTTGGCTTTGATTGTACAGTGATGCCAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | AGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTaGTTGGCATCACTGTACAATCAAAGCCAACAGCCACAGTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: SQCIIQSLTSTSQCP*LASLYNQSQQPQSA Trigger: AGCAGACTGTGGCTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR TCA 90 bp | TCGACCTTACGGCAGTCCAACGGTGCAGCTTTCAAGCTGAGTTCTTaGAACCGACCACTCAATTTAACAACTGCCTCCCTCCAATACATG | + |
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Preference number: 1 (lower is better) Translates to: STLRQSNGAAFKLSS*NRPLNLTTASLQYM Trigger: CATGTATTGGAGGGAGGCAGTTGTTAAATTGAGTGGTCGGTTTCAAGAACTCAGCTTGAAAGCTGCACCGTTGGACTGCCGTAAGGTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | ACAATGGAAGAAAGCCAAACAAACTTCCCGGGAAGGAAAGTAAAGTaGAACATCGTGAAGCTCTGGACACTTCTCTCCCGTGGCTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: TMEESQTNFPGRKVK*NIVKLWTLLSRGCG Trigger: ACCACAGCCACGGGAGAGAAGTGTCCAGAGCTTCACGATGTTCCACTTTACTTTCCTTCCCGGGAAGTTTGTTTGGCTTTCTTCCATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR TCA 90 bp | TCGTATGATACAGAGTACAGCTCTATAGCTTTTCGTTCACATGTGTaGGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: SYDTEYSSIAFRSHV*AFPSPSWSTHCYQV Trigger: CACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGTGAACGAAAAGCTATAGAGCTGTACTCTGTATCATACGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR GCA 90 bp | GGAATAGCTAGCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATaGAAGGAGCTCACAGAATGTTGGATACAATTTCAACTACAAGGG | + |
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Preference number: 1 (lower is better) Translates to: GIASSSRNTSKMEAV*KELTECWIQFQLQG Trigger: CCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGCTAGCTATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR GCA 90 bp | TACAGACAAGACATAGTTGTAAACCTGTTCATGCAAAAGTCAGTGTaGACAGGGATATTGTTAGGCCGTATACTTAGGTGGTGCTTCAGC | + |
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Preference number: 1 (lower is better) Translates to: YRQDIVVNLFMQKSV*TGILLGRILRWCFS Trigger: GCTGAAGCACCACCTAAGTATACGGCCTAACAATATCCCTGTGCACACTGACTTTTGCATGAACAGGTTTACAACTATGTCTTGTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR GCA 90 bp | AGCTTTCAAGCTGAGTTCTTGAAACCGACCACTCAATTTAACAACTaGCTCCCTCCAATACATGTAAACTACGTTGTGTGCACAGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: SFQAEFLKPTTQFNN*LPPIHVNYVVCTER Trigger: TCTTTCTGTGCACACAACGTAGTTTACATGTATTGGAGGGAGGCAGTTGTTAAATTGAGTGGTCGGTTTCAAGAACTCAGCTTGAAAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR TCA 90 bp | GAACTCATCTCCTGCCTCAGCTTCCTGAAGAGCAGCAGTCAAATTTaGTGTGGGCAGAAAATATTACTCCAATTACAAAGCATTCCTATA | + |
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Preference number: 1 (lower is better) Translates to: ELISCLSFLKSSSQI*CGQKILLQLQSIPI Trigger: TATAGGAATGCTTTGTAATTGGAGTAATATTTTCTGCCCACATCAAATTTGACTGCTGCTCTTCAGGAAGCTGAGGCAGGAGATGAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR GCA 90 bp | CCAAATATCAAAAACGTAACTCTGGACAACTTAGACTCACACACATaGACACAAACACGCCATTTTGAGAAAGGGTCTTGCTATGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: PNIKNVTLDNLDSHT*TQTRHFEKGSCYAV Trigger: AACTGCATAGCAAGACCCTTTCTCAAAATGGCGTGTTTGTGTGCATGTGTGTGAGTCTAAGTTGTCCAGAGTTACGTTTTTGATATTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | AACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATGTTaGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: NTSKMEAVCKELTEC*IQFQLQGKQLQKLC Trigger: GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR GCA 90 bp | AGCTCACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTaGAAAAGCTTTGCTGGCCCAGCAAATACTCAACACTTACCAAAG | + |
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Preference number: 1 (lower is better) Translates to: SSQNVGYNFNYKGNN*KSFAGPANTQHLPK Trigger: CTTTGGTAAGTGTTGAGTATTTGCTGGGCCAGCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CCA 90 bp | TTGTGCAAACTATGGTATAAAATTATCACCTGCCTTATTTTGCCATaGCACCGATTTCATAGAATAAGCCAGTGCATAATCCAAAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: LCKLWYKIITCLILP*HRFHRISQCIIQSL Trigger: GAGGCTTTGGATTATGCACTGGCTTATTCTATGAAATCGGTGCCATGGCAAAATAAGGCAGGTGATAATTTTATACCATAGTTTGCACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR TCA 90 bp | TTAAATGAATACTCTATCTGCCAGGTAAAAATCATTTTATGTCGCTaGAAGAAGAGGTTGTACAAGGAAAGAAACATGGTCTTCGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LNEYSICQVKIILCR*KKRLYKERNMVFVL Trigger: CAACACGAAGACCATGTTTCTTTCCTTGTACAACCTCTTCTTTCAGCGACATAAAATGATTTTTACCTGGCAGATAGAGTATTCATTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CAA 90 bp | CAATCAAAGCCAACAGCCACAGTCTGCTCTGACCGGAACAAGCAATaGTGCATTCGACCTTACGGCAGTCCAACGGTGCAGCTTTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: QSKPTATVCSDRNKQ*CIRPYGSPTVQLSS Trigger: GCTTGAAAGCTGCACCGTTGGACTGCCGTAAGGTCGAATGCACAATTGCTTGTTCCGGTCAGAGCAGACTGTGGCTGTTGGCTTTGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CAA 90 bp | CAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTaGGCATCACTGTACAATCAAAGCCAACAGCCACAGTCTGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QCIIQSLTSTSQCPW*ASLYNQSQQPQSAL Trigger: CAGAGCAGACTGTGGCTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CAA 90 bp | AAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTaGGTTGGCATCACTGTACAATCAAAGCCAACAGCCACAGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: KPVHNPKPHQHQSMP*VGITVQSKPTATVC Trigger: GCAGACTGTGGCTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCCAGTCCAGATGTGGACCACATCACCACAGCATCAGTGTGGCTCAGCACCCATGGGGTAACCAATaGAAGTTTAGGGGCTTAACT | + |
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Preference number: 2 (lower is better) Translates to: CFQSRCGPHHHSISVAQHPWGNQ*KFRGLT Trigger: AGTTAAGCCCCTAAACTTTCATTGGTTACCCCATGG...GTGCTGAGCCACACTGATGCTGTGGTGATGTGGTCCACATCTGGACTGGAAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR GCA 90 bp | ACCAGCACCAGTCAATGCCCTTGGTTGGCATCACTGTACAATCAAAGCCAACAGACGGCAGTCCAACGGTaGAGCTTTCAAGCTGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: TSTSQCPWLASLYNQSQQTAVQR*SFQAEF Trigger: GAACTCAGCTTGAAAGCTGCACCGTTGGACTGCCGT...CTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCCAGTCCAGATGTGGACCACATCACCACAGCATCAGTGTGGCTCAGCACAGTTGCGAATTGCTGTaGCTTGATTTGCTGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: CFQSRCGPHHHSISVAQHSCELL*LDLLET Trigger: TGTTTCCAGCAAATCAAGTCACAGCAATTCGCAACT...GTGCTGAGCCACACTGATGCTGTGGTGATGTGGTCCACATCTGGACTGGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGGTGCAGCTTTCAAGCTaGGTTCTTGAAACCGACCAC | + |
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Preference number: 2 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLVQLSS*VLETDH Trigger: GTGGTCGGTTTCAAGAACTCAGCTTGAAAGCTGCAC...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR GCA 90 bp | ACATGTGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCTCACCTGCCTTATTTTaGCATGGCACCGATTTCATA | + |
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Preference number: 2 (lower is better) Translates to: TCVSIPKSLMEHPLLPSASPALF*HGTDFI Trigger: TATGAAATCGGTGCCATGGCAAAATAAGGCAGGTGA...GGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CAA 90 bp | TTCGACCTTACGGCAGTCCAACGGTGCAGCTTTCAAGCTGAGTTCTaGAAACCGACCACTCAATTTAACAACTGCCTCCCTCCAATACAT | + |
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Preference number: 2 (lower is better) Translates to: FDLTAVQRCSFQAEF*KPTTQFNNCLPPIH Trigger: ATGTATTGGAGGGAGGCAGTTGTTAAATTGAGTGGTCGGTTTCAAGAACTCAGCTTGAAAGCTGCACCGTTGGACTGCCGTAAGGTCGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCTAGATTTTGAGAAAGGGTCTTaGTATGCAGTTCAAGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: CEHSQVPHGAPTVTKCLDFEKGS*YAVQAD Trigger: GTCAGCTTGAACTGCATAGCAAGACCCTTTCTCAAA...ATCTAGGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR CCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAGGAACACCTCAAAGATaGAGGCAGTATGCAAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: KCPKKTKSFGGSQATFLTGTPQR*RQYARS Trigger: GCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCC...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR TCA 90 bp | ACATGTGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCAGCAGCAGTCAAATTTaGTGTGGGCAGAAAATATTA | + |
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Preference number: 2 (lower is better) Translates to: TCVSIPKSLMEHPLLPSASSSQI*CGQKIL Trigger: TAATATTTTCTGCCCACATCAAATTTGACTGCTGCT...GGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR CCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTGGAAGGAAAGTAAAGTaGAACATCGTGAAGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ALDSCWHWSTVVHFITKCGRKVK*NIVKLW Trigger: CCAGAGCTTCACGATGTTCCACTTTACTTTCCTTCC...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR CCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAGGTGCTTCAGCATCTTaGCTAAGATGCCAATCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KCPKKTKSFGGSQATFLTGASAS*LRCQSL Trigger: GAGAGATTGGCATCTTAGCCAAGATGCTGAAGCACC...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCTAGATCAACAGCACCTTCACTaGTTATTAAAATGCCCTAAG | + |
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Preference number: 2 (lower is better) Translates to: CEHSQVPHGAPTVTKCLDQQHLH*LLKCPK Trigger: CTTAGGGCATTTTAATAACCAGTGAAGGTGCTGTTG...ATCTAGGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR TCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACACGAATTGCTGTGACTTaGTTTGCTGGAAACATCCGT | + |
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Preference number: 2 (lower is better) Translates to: KCPKKTKSFGGSQATFLTRIAVT*FAGNIR Trigger: ACGGATGTTTCCAGCAAATCAAGTCACAGCAATTCG...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR CCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAACCAGTCAATGCCCTTaGTTGGCATCACTGTACAAT | + |
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Preference number: 2 (lower is better) Translates to: KCPKKTKSFGGSQATFLTTSQCP*LASLYN Trigger: ATTGTACAGTGATGCCAACCAAGGGCATTGACTGGT...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR TCA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGGTGTGCAAAAGTATCTaGAAAATTGCACTACTGCTT | + |
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Preference number: 2 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLVCKSI*KIALLL Trigger: AAGCAGTAGTGCAATTTTTCAGATACTTTTGCACAC...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR GCA 90 bp | ACCAGCACCAGTCAATGCCCTTGGTTGGCATCACTGTACAATCAAAGCCAACAGGCACAGAAAGAAGAGTaGTCTTATTTTTGGAATAGC | + |
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Preference number: 2 (lower is better) Translates to: TSTSQCPWLASLYNQSQQAQKEE*SYFWNS Trigger: GCTATTCCAAAAATAAGAGCACTCTTCTTTCTGTGC...CTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR GCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAGTAAACTACGTTGTGTaGACAGAAAGAAGAGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: KCPKKTKSFGGSQATFLTVNYVV*TERRVL Trigger: GAGCACTCTTCTTTCTGTGCACACAACGTAGTTTAC...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR TCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTAATAACCTCAGCAGTTaGGGGTTTTCTATACTTCAA | + |
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Preference number: 2 (lower is better) Translates to: ALDSCWHWSTVVHFITKCNNLSS*GFSILQ Trigger: TTGAAGTATAGAAAACCCTCAACTGCTGAGGTTATT...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTTATAAAATTATCACCTaGCTTATTTTGCCATGGCAC | + |
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Preference number: 2 (lower is better) Translates to: ALDSCWHWSTVVHFITKCYKIIT*LILPWH Trigger: GTGCCATGGCAAAATAAGGCAGGTGATAATTTTATA...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CAA 90 bp | GAGCTCACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATaGCAAAAGCTTTGCTGGCCCAGCAAATACTCAACACTTACCAAA | + |
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Preference number: 2 (lower is better) Translates to: ELTECWIQFQLQGKQ*QKLCWPSKYSTLTK Trigger: TTTGGTAAGTGTTGAGTATTTGCTGGGCCAGCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR-3UTR CCA 90 bp | ATGCAAGGAGCTCACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTACAACCTCTGGCTTATaGAAATACAGACTTCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: MQGAHRMLDTISTTRETITTSGL*KYRLLK Trigger: CTTCAGAAGTCTGTATTTCCATAAGCCAGAGGTTGT...AATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| 3UTR CAA 90 bp | TTAGTTTTGTGCAAACTATGGTATAAAATTATCACCTGCCTTATTTaGCCATGGCACCGATTTCATAGAATAAGCCAGTGCATAATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LVLCKLWYKIITCLI*PWHRFHRISQCIIQ Trigger: TTGGATTATGCACTGGCTTATTCTATGAAATCGGTGCCATGGCAAAATAAGGCAGGTGATAATTTTATACCATAGTTTGCACAAAACTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | CCCGTGGCTGTGGTCAACCTGTCGTTCAGTGCATTGTaGGGTCACATGGAATGGTCCTCACGGGGCGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: PVAVVNLSFSAL*GHMEWSSRGAH Trigger: GTGTGCGCCCCGTGAGGACCATTCCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | TGTGTGGTGGTGGGTCTGCTGCTTCCAGTCCAGATGTaGACCACATCACCACAGCATCAGTGTGGCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: CVVVGLLLPVQM*TTSPQHQCGSA Trigger: TGCTGAGCCACACTGATGCTGTGGTGATGTGGTCCACATCTGGACTGGAAGCAGCAGACCCACCACCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | CATCGTGAAGCTCTGGACACTTCTCTCCCGTGGCTGTaGTCAACCTGTCGTTCAGTGCATTGTGCGGTCACA | + |
|
Preference number: 3 (lower is better) Translates to: HREALDTSLPWL*STCRSVHCAVT Trigger: TGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGAGAGAAGTGTCCAGAGCTTCACGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | ACAGCCACAGTCTGCTCTGACCGGAACAAGCAATTGTaGATTCGACCTTACGGCAGTCCAACGGTGCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TATVCSDRNKQL*IRPYGSPTVQL Trigger: AAGCTGCACCGTTGGACTGCCGTAAGGTCGAATGCACAATTGCTTGTTCCGGTCAGAGCAGACTGTGGCTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | TCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTaGCTAGATAGGCTAATTCCAGCACTTCCGGTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SQVPHGAPTVTK*LDRLIPALPVP Trigger: AGGCACCGGAAGTGCTGGAATTAGCCTATCTAGGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR-3UTR CAA 90 bp | ACATGTGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCGTTCAGTCCCAGAGCTaGTGCTGTAACCACTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: TCVSIPKSLMEHPLLPSAVQSQS*CCNHCE Trigger: CTCACAGTGGTTACAGCACAAGCTCTGGGACTGAAC...GGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR TCA 72 bp | CGGCAGTCCAACGGTGCAGCTTTCAAGCTGAGTTCTTaGAACCGACCACTCAATTTAACAACTGCCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RQSNGAAFKLSS*NRPLNLTTASL Trigger: GAGGGAGGCAGTTGTTAAATTGAGTGGTCGGTTTCAAGAACTCAGCTTGAAAGCTGCACCGTTGGACTGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | TCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTaGCATCACTGTACAATCAAAGCCAACAGCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKASPAPVNALG*HHCTIKANSHS Trigger: ACTGTGGCTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR TCA 72 bp | CACTGTACAATCAAAGCCAACAGCCACAGTCTGCTCTaGCCGGAACAAGCAATTGTGCATTCGACCTTACGG | + |
|
Preference number: 3 (lower is better) Translates to: HCTIKANSHSLL*PEQAIVHSTLR Trigger: CCGTAAGGTCGAATGCACAATTGCTTGTTCCGGTCAGAGCAGACTGTGGCTGTTGGCTTTGATTGTACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | GGCATCACTGTACAATCAAAGCCAACAGCCACAGTCTaGTCTGACCGGAACAAGCAATTGTGCATTCGACCT | + |
|
Preference number: 3 (lower is better) Translates to: GITVQSKPTATV*SDRNKQLCIRP Trigger: AGGTCGAATGCACAATTGCTTGTTCCGGTCAGAGCAGACTGTGGCTGTTGGCTTTGATTGTACAGTGATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGCTACAAGGGAAACAATaGCAAAAGCTTTGCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLLQGKQ*QKLCWP Trigger: GGGCCAGCAAAGCTTTTGCAATTGTTTCCCTTGTAG...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR TCA 72 bp | ACAGAGTACAGCTCTATAGCTTTTCGTTCACATGTGTaGGCATTCCCAAGTCCCTCATGGAGCACCCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: TEYSSIAFRSHV*AFPSPSWSTHC Trigger: ACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGTGAACGAAAAGCTATAGAGCTGTACTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | CAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATaGCCTTGGTTGGCATCACTGTACAATCAAAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: QCIIQSLTSTSQ*PWLASLYNQSQ Trigger: TTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | GAAAGCCAAACAAACTTCCCGGGAAGGAAAGTAAAGTaGAACATCGTGAAGCTCTGGACACTTCTCTCCCGT | + |
|
Preference number: 3 (lower is better) Translates to: ESQTNFPGRKVK*NIVKLWTLLSR Trigger: ACGGGAGAGAAGTGTCCAGAGCTTCACGATGTTCCACTTTACTTTCCTTCCCGGGAAGTTTGTTTGGCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | ATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTaGTTGGCATCACTGTACAATCAAAGCCAACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: IIQSLTSTSQCP*LASLYNQSQQP Trigger: TGGCTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR TCA 72 bp | AAGTTAGCTCGCCAATGGGCTGGGGGAGGTGAGCTGTaGCTCAATTCTAAGAAAGCTTTAGCTAACAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: KLARQWAGGGEL*LNSKKALANKT Trigger: GGTTTTGTTAGCTAAAGCTTTCTTAGAATTGAGTCACAGCTCACCTCCCCCAGCCCATTGGCGAGCTAACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | TGCACAGGGATATTGTTAGGCCGTATACTTAGGTGGTaGTTCAGCATCTTGGCTAAGATGCCAATCTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CTGILLGRILRW*FSILAKMPISL Trigger: CAGAGAGATTGGCATCTTAGCCAAGATGCTGAAGCACCACCTAAGTATACGGCCTAACAATATCCCTGTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGGGAGCTCACAGAATGTaGGATACAATTTCAACTACA | + |
|
Preference number: 3 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLGAHRM*DTISTT Trigger: TGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCC...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | ACATGCACACAAACACGCCATTTTGAGAAAGGGTCTTaGTATGCAGTTCAAGCTGACCTTGAACTCATCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TCTQTRHFEKGS*YAVQADLELIS Trigger: GGAGATGAGTTCAAGGTCAGCTTGAACTGCATAGCAAGACCCTTTCTCAAAATGGCGTGTTTGTGTGCATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | AGCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATaGAAGGAGCTCACAGAATGTTGGATACAATTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSRNTSKMEAV*KELTECWIQFQ Trigger: TTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | GCTGAGTTCTTGAAACCGACCACTCAATTTAACAACTaGCTCCCTCCAATACATGTAAACTACGTTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: AEFLKPTTQFNN*LPPIHVNYVVC Trigger: GCACACAACGTAGTTTACATGTATTGGAGGGAGGCAGTTGTTAAATTGAGTGGTCGGTTTCAAGAACTCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR TCA 72 bp | TCCTGCCTCAGCTTCCTGAAGAGCAGCAGTCAAATTTaGTGTGGGCAGAAAATATTACTCCAATTACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SCLSFLKSSSQI*CGQKILLQLQS Trigger: GCTTTGTAATTGGAGTAATATTTTCTGCCCACATCAAATTTGACTGCTGCTCTTCAGGAAGCTGAGGCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | GACATAGTTGTAAACCTGTTCATGCAAAAGTCAGTGTaGACAGGGATATTGTTAGGCCGTATACTTAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DIVVNLFMQKSV*TGILLGRILRW Trigger: CCACCTAAGTATACGGCCTAACAATATCCCTGTGCACACTGACTTTTGCATGAACAGGTTTACAACTATGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | CCTCAGCTTCCTGAAGAGCAGCAGTCAAATTTGATGTaGGCAGAAAATATTACTCCAATTACAAAGCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: PQLPEEQQSNLM*AENITPITKHS Trigger: GGAATGCTTTGTAATTGGAGTAATATTTTCTGCCCACATCAAATTTGACTGCTGCTCTTCAGGAAGCTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR-3UTR CAA 90 bp | ATGCAAGGAGCTCACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCGAATTGCTGTGACTaGATTTGCTGGAAACATCCG | + |
|
Preference number: 3 (lower is better) Translates to: MQGAHRMLDTISTTRETIANCCD*ICWKHP Trigger: CGGATGTTTCCAGCAAATCAAGTCACAGCAATTCGC...AATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAACTACGTTGTGTGCACAGAAAGAAGAGTGCTCTTATTTTTGGAATAGCTACAATTGCAAAAGCTTaGCTGGCCCAGCAAATACTC | + |
|
Preference number: 3 (lower is better) Translates to: CKLRCVHRKKSALIFGIATIAKA*LAQQIL Trigger: GAGTATTTGCTGGGCCAGCAAAGCTTTTGCAATTGT...AGCTATTCCAAAAATAAGAGCACTCTTCTTTCTGTGCACACAACGTAGTTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | CAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTaGTGGCCCAGCAAATACTCAACACTTACCAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QFQLQGKQLQKL*WPSKYSTLTKD Trigger: GTCTTTGGTAAGTGTTGAGTATTTGCTGGGCCAGCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | CGTCTTAACACTAGTACAGGTACATACACATTTAGCTaGCCTCATCTAAGCAAGCAGTTGCAGTTTTGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RLNTSTGTYTFS*PHLSKQLQFCL Trigger: TAAACAAAACTGCAACTGCTTGCTTAGATGAGGGCAGCTAAATGTGTATGTACCTGTACTAGTGTTAAGACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | AAGATGGAGGCAGTATGCAAGGAGCTCACAGAATGTTaGATACAATTTCAACTACAAGGGAAACAATTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: KMEAVCKELTEC*IQFQLQGKQLQ Trigger: TTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCATACTGCCTCCATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR GCA 72 bp | AATGTTGGATACAATTTCAACTACAAGGGAAACAATTaGAAAAGCTTTGCTGGCCCAGCAAATACTCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: NVGYNFNYKGNN*KSFAGPANTQH Trigger: GTGTTGAGTATTTGCTGGGCCAGCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR TCA 72 bp | TACTCTATCTGCCAGGTAAAAATCATTTTATGTCGCTaGAAGAAGAGGTTGTACAAGGAAAGAAACATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: YSICQVKIILCR*KKRLYKERNMV Trigger: GACCATGTTTCTTTCCTTGTACAACCTCTTCTTTCAGCGACATAAAATGATTTTTACCTGGCAGATAGAGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | CTATGGTATAAAATTATCACCTGCCTTATTTTGCCATaGCACCGATTTCATAGAATAAGCCAGTGCATAATC | + |
|
Preference number: 3 (lower is better) Translates to: LWYKIITCLILP*HRFHRISQCII Trigger: GATTATGCACTGGCTTATTCTATGAAATCGGTGCCATGGCAAAATAAGGCAGGTGATAATTTTATACCATAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | CATTTTAATCCTACACATTACAGGGCAAACAGATACTaGACCCTATTTCCACATTTCATAAATCCAAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HFNPTHYRANRY*TLFPHFINPSF Trigger: AAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCTGTTTGCCCTGTAATGTGTAGGATTAAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CCA 72 bp | GATTCAACATTAACTCCTCTTTCACCAGATAATATTTaGTGTGCAAAAGTATCTGAAAAATTGCACTACTGC | + |
|
Preference number: 3 (lower is better) Translates to: DSTLTPLSPDNI*CAKVSEKLHYC Trigger: GCAGTAGTGCAATTTTTCAGATACTTTTGCACACCAAATATTATCTGGTGAAAGAGGAGTTAATGTTGAATC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CAA 72 bp | CCAACAGCCACAGTCTGCTCTGACCGGAACAAGCAATaGTGCATTCGACCTTACGGCAGTCCAACGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PTATVCSDRNKQ*CIRPYGSPTVQ Trigger: CTGCACCGTTGGACTGCCGTAAGGTCGAATGCACAATTGCTTGTTCCGGTCAGAGCAGACTGTGGCTGTTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCTAGATTCCGGGAGCATCTCATaGCGTGTGCTAACTACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CEHSQVPHGAPTVTKCLDSGSIS*RVLTTA Trigger: CGCTGTAGTTAGCACACGGCATGAGATGCTCCCGGA...ATCTAGGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | TCCCGTGGCTGTGGTCAACCTGTCGTTCAGTGCATTGTGCGGTCACATGGAATGAAGGGCCAAGGCATTTaGCAGCTAAGTTCTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRGCGQPVVQCIVRSHGMKGQGI*QLSSAL Trigger: AAGTGCAGAACTTAGCTGTCAAATGCCTTGGCCCTT...CATTCCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGGCTCCGGGTTGGAGCTaGTCTGTGACTGGAATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLAPGWS*SVTGIH Trigger: GTGAATTCCAGTCACAGATCAGCTCCAACCCGGAGC...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTGTCTCCCTGCTCCATTaGGTCAGGGTCACACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALDSCWHWSTVVHFITKCVSLLH*VRVTQP Trigger: TGGCTGTGTGACCCTGACGCAATGGAGCAGGGAGAC...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGGAGCTCATCCAGAACTaGGTCAATCATGGCGGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLELIQN*VNHGGR Trigger: ACGGCCGCCATGATTGACGCAGTTCTGGATGAGCTC...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGTCCGCACACTCACAGTaGTTTAGCAGCAAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLSAHSQ*FSSKAQ Trigger: CTGGGCCTTGCTGCTAAAGCACTGTGAGTGTGCGGA...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTCCACGACATTCCTGGTaGCTTCCTCCGCACACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDSCWHWSTVVHFITKCPRHSW*LPPHTH Trigger: GTGAGTGTGCGGAGGAAGGCACCAGGAATGTCGTGG...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCTTTTCAGGCCGATGCTaGAAATGTCTCGCAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCVSIPKSLMEHPLLPSAFSGRC*KCLAAA Trigger: AGCAGCTGCGAGACATTTCCAGCATCGGCCTGAAAA...GGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | TCCCGTGGCTGTGGTCAACCTGTCGTTCAGTGCATTGTGCGGTCACATGGAATGAAGACTGCTTATGAGTaGGAGCAGTGCTCTGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRGCGQPVVQCIVRSHGMKTAYE*EQCSEN Trigger: ATTCTCAGAGCACTGCTCTCACTCATAAGCAGTCTT...CATTCCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCATACCCTTTAAGCCGTaGGAGGAGAGTTTCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TCVSIPKSLMEHPLLPSAIPFKP*EESFRI Trigger: GATCCTGAAACTCTCCTCCCACGGCTTAAAGGGTAT...GGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACACCGCCACTGCCCTCATaGCAGACCGCTTTAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KCPKKTKSFGGSQATFLTPPLPS*QTALAH Trigger: ATGAGCTAAAGCGGTCTGCCATGAGGGCAGTGGCGG...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | TCCCGTGGCTGTGGTCAACCTGTCGTTCAGTGCATTGTGCGGTCACATGGAATGGAGCTGATCTGTGACTaGAATTCACTCATAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGCGQPVVQCIVRSHGMELICD*NSLIRG Trigger: CCCTCTTATGAGTGAATTCCAGTCACAGATCAGCTC...CATTCCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CAA 72 bp | ATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTaGGCATCACTGTACAATCAAAGCCAACAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: IQSLTSTSQCPW*ASLYNQSQQPQ Trigger: CTGTGGCTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGTCAACATGTCAGCCATaGTATCCAAGGCTTCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLSTCQP*YPRLRA Trigger: AGCTCGAAGCCTTGGATATCATGGCTGACATGTTGA...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATGAAGGGCTTCTGAAGTaGTCTTGTAAAACGGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALPGTPQRWRQYARSSQNEGLLK*SCKTGL Trigger: GAGACCCGTTTTACAAGATCACTTCAGAAGCCCTTC...ATTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | AGCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAAATTTTTCCTGAGGAATaGAGCAAGGATGGGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSRNTSKMEAVCKELTEIFPEE*SKDGDS Trigger: GGAGTCCCCATCCTTGCTTCATTCCTCAGGAAAAAT...TTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTAGTCTAGCATGGCACTaGGCGCTCCTCCCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: ANTQHLPKTIGKLARQWASLAWH*ALLPAV Trigger: TACTGCAGGGAGGAGCGCTCAGTGCCATGCTAGACT...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | AGCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATTTTCTCCAGCAAGTTaGAGATGTGGTACGAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SSSRNTSKMEAVCKELTEFSPAS*RCGTKR Trigger: GCGCTTCGTACCACATCTCCAACTTGCTGGAGAAAA...TTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTAGAGCCACTGGAAGCTaGCGGAAGTTCTCCAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALDSCWHWSTVVHFITKCRATGS*RKFSNY Trigger: GTAATTGGAGAACTTCCGCCAGCTTCCAGTGGCTCT...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTACTTTGACAAGCTGCTaGGTGACAAGAAGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALDSCWHWSTVVHFITKCTLTSC*VTRRAS Trigger: AGAAGCCCTTCTTGTCACTCAGCAGCTTGTCAAAGT...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTTGCATAGGACGCAGCTaGTTTGACTTCTTCACTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALDSCWHWSTVVHFITKCCIGRS*FDFFTR Trigger: CCTAGTGAAGAAGTCAAATCAGCTGCGTCCTATGCA...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGGTTGGAGCTGATCTGTaGCTGGAATTCACTCATAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLVGADL*LEFTHK Trigger: CTTATGAGTGAATTCCAGTCACAGATCAGCTCCAAC...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCTAGATTGGCTGGTTATTTCTTaGAGTACAAAGGGCAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: CEHSQVPHGAPTVTKCLDWLVIS*STKGRY Trigger: GTATCTGCCCTTTGTACTGCAAGAAATAACCAGCCA...ATCTAGGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGCAGCCAACTTTGCACTaGACGAGTTTGTTTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLQPTLH*TSLFQK Trigger: CTTCTGAAACAAACTCGTCCAGTGCAAAGTTGGCTG...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ACATGTGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCAACCGTGTGTTTAAATaGACCCATTTCTACCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TCVSIPKSLMEHPLLPSANRVFK*THFYLS Trigger: AGAGAGGTAGAAATGGGTCCATTTAAACACACGGTT...GGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | GCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATGATTGTTTGTTCCAGTaGCAACCAGAGCTTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ALPGTPQRWRQYARSSQNDCLFQ*QPELGK Trigger: TTTTCCAAGCTCTGGTTGTCACTGGAACAAACAATC...ATTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCTAGATTTGACAGCTAAGTTCTaGACTTCGCCATTTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: CEHSQVPHGAPTVTKCLDLTAKF*TSPFLS Trigger: GGATAAAAATGGCGAAGTGCAGAACTTAGCTGTCAA...ATCTAGGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | AGCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAACTCTTCTCTTTCATCTaGTTGTGCAGGGCTTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSSRNTSKMEAVCKELTELFSFI*LCRALT Trigger: TGTTAAAGCCCTGCACAAGCAGATGAAAGAGAAGAG...TTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAATATGGCTTAAGGCCTaGCACCGATGCAGAGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KCPKKTKSFGGSQATFLTIWLKA*HRCRAN Trigger: ATTAGCTCTGCATCGGTGGCAGGCCTTAAGCCATAT...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTGTGACAACCAGAGCTTaGAAAAAGTCTAGCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALDSCWHWSTVVHFITKCVTTRA*KKSSMA Trigger: TGCCATGCTAGACTTTTTCCAAGCTCTGGTTGTCAC...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | AGCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAAGAAGATACTGCCTTTTaGGCTGGCTGGTTATTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSRNTSKMEAVCKELTEEDTAF*AGWLFL Trigger: AAGAAATAACCAGCCAGCCCAAAAGGCAGTATCTTC...TTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | GCTTTGGACAGCTGCTGGCACTGGTCCACTGTGGTCCATTTTATAACCAAATGTCAGACAGGTCAGAATTaGAGGGTGGAAATTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALDSCWHWSTVVHFITKCQTGQN*RVEINK Trigger: CTTGTTAATTTCCACCCTTCAATTCTGACCTGTCTG...ACATTTGGTTATAAAATGGACCACAGTGGACCAGTGCCAGCAGCTGTCCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAGACAAGAAGGGCTTCTaGAGTGATCTTGTAAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: KCPKKTKSFGGSQATFLTDKKGF*SDLVKR Trigger: CCGTTTTACAAGATCACTTCAGAAGCCCTTCTTGTC...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTCTGTTTTCAGGCCGATaGTGGAAATGTCTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ANTQHLPKTIGKLARQWALFSGR*WKCLAA Trigger: AGCTGCGAGACATTTCCAGCATCGGCCTGAAAACAG...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | AGCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATCTTTCATCTGCTTGTaGAGGGCTTTAACAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSRNTSKMEAVCKELTESFICL*RALTML Trigger: CAACATTGTTAAAGCCCTGCACAAGCAGATGAAAGA...TTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | ACATGTGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCGATTTTAATTCCAACTaGCCACTTAAGTCAATATGG | + |
|
Preference number: 4 (lower is better) Translates to: TCVSIPKSLMEHPLLPSADFNSN*PLKSIW Trigger: CCATATTGACTTAAGTGGGCAGTTGGAATTAAAATC...GGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | TGTGAGCATTCCCAAGTCCCTCATGGAGCACCCACTGTTACCAAGTGCCTAGATTGCTTTTCAAACTCCTaGTTTACAGAGTTTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CEHSQVPHGAPTVTKCLDCFSNS*FTEFAF Trigger: AAAGGCAAACTCTGTAAAGCAGGAGTTTGAAAAGCA...ATCTAGGCACTTGGTAACAGTGGGTGCTCCATGAGGGACTTGGGAATGCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACATACTGCCTTTTGGGCTaGCTGGTTATTTCTTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCPKKTKSFGGSQATFLTYCLLG*LVISCS Trigger: ACTGCAAGAAATAACCAGCCAGCCCAAAAGGCAGTA...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | GCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATTTGATTCCAAGTTGGTaGACGAAGAATCTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ALPGTPQRWRQYARSSQNLIPSW*TKNLSG Trigger: TCCAGAAAGATTCTTCGTCCACCAACTTGGAATCAA...ATTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTTTCCTGCTTTGCTATTaGACTGGTAAGGCGTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ANTQHLPKTIGKLARQWAFLLCY*TGKASS Trigger: ACTGGACGCCTTACCAGTGCAATAGCAAAGCAGGAA...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAACGATCGTCTCCACTTaGTACTCTTTCACTTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: KCPKKTKSFGGSQATFLTTIVST*YSFTLL Trigger: GAGTAAAGTGAAAGAGTACCAAGTGGAGACGATCGT...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ACCAGCACCAGTCAATGCCCTTGGTTGGCATCACTGTACAATCAAAGCCAACAGACATGGAGTCATTTTTaGACAACTCTGACAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSTSQCPWLASLYNQSQQTWSHF*TTLTTD Trigger: ATCTGTTGTCAGAGTTGTCCAAAAATGACTCCATGT...CTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCTCATCGTCACTCCCTTaGTCATCGTCGTCCCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: TECWIQFQLQGKQLQKLCSSSLP*SSSSPP Trigger: CGGTGGGGACGACGATGACCAAGGGAGTGACGATGA...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ATGCAAGGAGCTCACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTACACGTAGCACGCAGTaGCTCAACAAGTCGGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MQGAHRMLDTISTTRETITRSTQ*LNKSVQ Trigger: CTGGACCGACTTGTTGAGCCACTGCGTGCTACGTGT...AATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ACCAGCACCAGTCAATGCCCTTGGTTGGCATCACTGTACAATCAAAGCCAACAGGACGAAGAATCTTTCTaGATACTTTCAAAGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTSQCPWLASLYNQSQQDEESF*ILSKMA Trigger: AGCCATCTTTGAAAGTATCCAGAAAGATTCTTCGTC...CTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACACTTTCCTTGACTTCTTaGTCAATGTCAGCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCPKKTKSFGGSQATFLTLSLTS*SMSAAF Trigger: AAAAGCAGCTGACATTGATCAAGAAGTCAAGGAAAG...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | ATGCAAGGAGCTCACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTCAGAAAGCATGTTGGTaGAGAGGGTGTCCACGATCG | + |
|
Preference number: 4 (lower is better) Translates to: MQGAHRMLDTISTTRETIQKACW*RGCPRS Trigger: CGATCGTGGACACCCTCTGCACCAACATGCTTTCTG...AATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | ATGCAAGGAGCTCACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTACTTTCAAAGATGGCTaGCAGCTCCGGGTTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MQGAHRMLDTISTTRETITFKDG*QLRVGA Trigger: AGCTCCAACCCGGAGCTGGCAGCCATCTTTGAAAGT...AATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCGGAATGAAGCAAGGATaGGGACTCCCTCTCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TECWIQFQLQGKQLQKLCGMKQG*GLPLPA Trigger: TGCTGGGAGAGGGAGTCCCCATCCTTGCTTCATTCC...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CAA 72 bp | CTCCTGCCTCAGCTTCCTGAAGAGCAGCAGTCAAATTaGATGTGGGCAGAAAATATTACTCCAATTACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLPQLPEEQQSN*MWAENITPITK Trigger: CTTTGTAATTGGAGTAATATTTTCTGCCCACATCAAATTTGACTGCTGCTCTTCAGGAAGCTGAGGCAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | TGTAAACTACGTTGTGTGCACAGAAAGAAGAGTGCTCTTATTTTTGGAATAGCTTCCAAGGCTTCGAGCTaGACAGAAACATCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CKLRCVHRKKSALIFGIASKASS*TETSSC Trigger: GCAGGAAGATGTTTCTGTTCAGCTCGAAGCCTTGGA...AGCTATTCCAAAAATAAGAGCACTCTTCTTTCTGTGCACACAACGTAGTTTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAGCATCTTCTCACAAATaGTTCAAAAGCTTGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KCPKKTKSFGGSQATFLTASSHK*FKSLNA Trigger: TGCATTCAAGCTTTTGAATCATTTGTGAGAAGATGC...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTATCTCCTTCAAAGAGTaGAGCAGAAGATACTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ANTQHLPKTIGKLARQWAISFKE*SRRYCL Trigger: AAGGCAGTATCTTCTGCTTCACTCTTTGAAGGAGAT...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTGGATACTTTCAAAGATaGCTGCCAGCTCCGGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFGYFQR*LPAPGW Trigger: CCAACCCGGAGCTGGCAGCCATCTTTGAAAGTATCC...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTCAGCTCATAACTAGGTaGCCAAGAGCAATAATTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ANTQHLPKTIGKLARQWAQLITR*PRAIIV Trigger: AACAATTATTGCTCTTGGCCACCTAGTTATGAGCTG...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTCCATTGATTCCAAGTTaGTGGACGAAGAATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ANTQHLPKTIGKLARQWAPLIPS*WTKNLS Trigger: AGAAAGATTCTTCGTCCACCAACTTGGAATCAATGG...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | TGTAAACTACGTTGTGTGCACAGAAAGAAGAGTGCTCTTATTTTTGGAATAGCTGCAGTTCTTCAACAGTaGATCAATAGGCTGAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: CKLRCVHRKKSALIFGIAAVLQQ*INRLRM Trigger: CATCCTCAGCCTATTGATCCACTGTTGAAGAACTGC...AGCTATTCCAAAAATAAGAGCACTCTTCTTTCTGTGCACACAACGTAGTTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CAA 72 bp | TTGTTAGGCCGTATACTTAGGTGGTGCTTCAGCATCTaGGCTAAGATGCCAATCTCTCTGAAATATAACATA | + |
|
Preference number: 4 (lower is better) Translates to: LLGRILRWCFSI*AKMPISLKYNI Trigger: TATGTTATATTTCAGAGAGATTGGCATCTTAGCCAAGATGCTGAAGCACCACCTAAGTATACGGCCTAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CAA 72 bp | AAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATGTaGGATACAATTTCAACTACAAGGGAAACAATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDGGSMQGAHRM*DTISTTRETIA Trigger: TGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCATACTGCCTCCATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCAACATCTTCCTGCTTTaGTATTGCACTGGTAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TECWIQFQLQGKQLQKLCNIFLL*YCTGKA Trigger: CGCCTTACCAGTGCAATAGCAAAGCAGGAAGATGTT...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTTCACACAGCCAACTTTaGACTGGACGAGTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFSHSQL*TGRVCF Trigger: GAAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGA...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTAGTGATGGCTTGTTATaGGCCGCAGAATTGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFSDGLL*AAELNV Trigger: CACATTCAATTCTGCGGCCCATAACAAGCCATCACT...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| 3UTR CAA 72 bp | ACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTaGCTGGCCCAGCAAATACTCAACACTTACCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TISTTRETIAKA*LAQQILNTYQR Trigger: TCTTTGGTAAGTGTTGAGTATTTGCTGGGCCAGCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCTATCCTCCAGCAACCTaGGAATCATCTTCACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: TECWIQFQLQGKQLQKLCYPPAT*ESSSQL Trigger: AAGTTGTGAAGATGATTCTCAGGTTGCTGGAGGATA...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTCATTCAGTGAGAAAATaGTTCCTGGTACCAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFHSVRK*FLVPVQ Trigger: CTGTACTGGTACCAGGAATCATTTTCTCACTGAATG...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | ATGCAAGGAGCTCACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTACAGAAACATCTTCCTaGTTTGCTATTGCACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: MQGAHRMLDTISTTRETITETSS*FAIALV Trigger: TACCAGTGCAATAGCAAAGCAGGAAGATGTTTCTGT...AATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGTGAGCTCCTTGCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTAGAGACAGGTATGCATaGAAAACATCTGCCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFRDRYA*KTSAFT Trigger: TGTAAAGGCAGATGTTTTTCATGCATACCTGTCTCT...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTGGACTTATCATTCAGTaGGAAAATGATTCCTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFGLIIQ*ENDSWY Trigger: GTACCAGGAATCATTTTCTCACTGAATGATAAGTCC...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR TCA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCGGAATCTGTAGACCTTaGGTTCTTGACATCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TECWIQFQLQGKQLQKLCGICRP*VLDILN Trigger: ATTCAAGATGTCAAGAACTCAAGGTCTACAGATTCC...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTATTCTATGGCCAGCTTaGCTACTAATAGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFILWPA*LLIAAI Trigger: TATTGCTGCTATTAGTAGGCAAGCTGGCCATAGAAT...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR GCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTCAGAAGAGACAGGTATaGATGAAAAACATCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFQKRQV*MKNICL Trigger: AAGGCAGATGTTTTTCATGCATACCTGTCTCTTCTG...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTTCAGGTTTGATGAGCTaGACTTATCATTCAGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RYWTLFPHFINPSFKFPFSGLMS*TYHSVR Trigger: TCTCACTGAATGATAAGTCCAGCTCATCAAACCTGA...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CCA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCTCCTTGTTGTTGACATaGAGTCATTTTTGGACAACT | + |
|
Preference number: 4 (lower is better) Translates to: TECWIQFQLQGKQLQKLCSLLLT*SHFWTT Trigger: AGTTGTCCAAAAATGACTCCATGTCAACAACAAGGA...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 90 bp | CTAGGGCTGGTCAGCTGGGGAAGCAGACAGGTCAGAATTGAAGGGTaGAAATTAACAAGCAGTCCTCCTTGCCTGCTCAACATGTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLVSWGSRQVRIEG*KLTSSPPCLLNMSA Trigger: GGCTGACATGTTGAGCAGGCAAGGAGGACTGCTTGTTAATTTCCACCCTTCAATTCTGACCTGTCTGCTTCCCCAGCTGACCAGCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS TCA 90 bp | TGCAAGTCTAGGGCTGGTCAGCTGGGGAAGCAGACAGGTCAGAATTaGAGGGTGGAAATTAACAAGCAGTCCTCCTTGCCTGCTCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: CKSRAGQLGKQTGQN*RVEINKQSSLPAQH Trigger: ATGTTGAGCAGGCAAGGAGGACTGCTTGTTAATTTCCACCCTTCAATTCTGACCTGTCTGCTTCCCCAGCTGACCAGCCCTAGACTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS GCA 90 bp | ACAACTTTCCTCTCGCTGTCATCGTCCAGCTTGATAGAGTCTTTCTaGAGCTCTGTCATCAGGTCGTTGGTCGCCATGAACCTGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TTFLSLSSSSLIESF*SSVIRSLVAMNLKS Trigger: GGACTTCAGGTTCATGGCGACCAACGACCTGATGACAGAGCTGCAGAAAGACTCTATCAAGCTGGACGATGACAGCGAGAGGAAAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS GCA 90 bp | ACAACTTTCCTCTCGCTGTCATCGTCCAGCTTGATAGAGTCTTTCTaGAGCTCTGTCATCAGGTCGTTGGTCGCCATGAACCTTCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: TTFLSLSSSSLIESF*SSVIRSLVAMNLRQ Trigger: TTGGCGAAGGTTCATGGCGACCAACGACCTGATGACAGAGCTGCAGAAAGACTCTATCAAGCTGGACGATGACAGCGAGAGGAAAGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126373.2 |
||
| CDS CCA 90 bp | CTTTCAAAGATGGCTGCCAGCTCCGGGTTGGAGCTGATCTGTGACTaGAATTCACTCATAAGAGGGCTCTTCTCTGCCTCTGGAATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LSKMAASSGLELICD*NSLIRGLFSASGMV Trigger: AACCATTCCAGAGGCAGAGAAGAGCCCTCTTATGAGTGAATTCCAGTCACAGATCAGCTCCAACCCGGAGCTGGCAGCCATCTTTGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | AGCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATCTGTCATCAGGTCGTaGGTCGCCATGAACCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSSRNTSKMEAVCKELTESVIRS*VAMNLK Trigger: CTTCAGGTTCATGGCGACCAACGACCTGATGACAGA...TTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS-3UTR CAA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGAACAAGCAGTCCTCCTaGCCTGCTCAACATGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLNKQSS*PAQHVS Trigger: GCTGACATGTTGAGCAGGCAAGGAGGACTGCTTGTT...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | TGCTTCCAGTCCAGATGTGGACCACATCACCACAGCATCAGTGTGGCTCAGCACTTGCACTGGACGAGTTaGTTTCAGAAGAGACAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CFQSRCGPHHHSISVAQHLHWTS*FQKRQV Trigger: TACCTGTCTCTTCTGAAACAAACTCGTCCAGTGCAA...GTGCTGAGCCACACTGATGCTGTGGTGATGTGGTCCACATCTGGACTGGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS TCA 90 bp | GATACTTTCAAAGATGGCTGCCAGCTCCGGGTTGGAGCTGATCTGTaGCTGGAATTCACTCATAAGAGGGCTCTTCTCTGCCTCTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: DTFKDGCQLRVGADL*LEFTHKRALLCLWN Trigger: ATTCCAGAGGCAGAGAAGAGCCCTCTTATGAGTGAATTCCAGTCACAGATCAGCTCCAACCCGGAGCTGGCAGCCATCTTTGAAAGTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS GCA 90 bp | ACCAGAGCTTGGAAAAAGTCTAGCATGGCACTGAGCGCTCCTCCCTaGAGTAGAGGCGATCTCACAAGTCCAATCAGTTCATTGAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: TRAWKKSSMALSAPP*SRGDLTSPISSLRI Trigger: TATCCTCAATGAACTGATTGGACTTGTGAGATCGCCTCTACTGCAGGGAGGAGCGCTCAGTGCCATGCTAGACTTTTTCCAAGCTCTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS CCA 90 bp | GGAAGAACTGAGTCCAGAAGGTCCCGTATCAGTGATGGCTTGTTATaGGCCGCAGAATTGAATGTGACCAAGGCCACTCTTCTTACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRTESRRSRISDGLL*AAELNVTKATLLTF Trigger: GAACGTAAGAAGAGTGGCCTTGGTCACATTCAATTCTGCGGCCCATAACAAGCCATCACTGATACGGGACCTTCTGGACTCAGTTCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS-3UTR CAA 90 bp | TCCCGTGGCTGTGGTCAACCTGTCGTTCAGTGCATTGTGCGGTCACATGGAATGACTGTATGTAGGTCCTaGTTGTTGACATGGAGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SRGCGQPVVQCIVRSHGMTVCRS*LLTWSH Trigger: ATGACTCCATGTCAACAACAAGGACCTACATACAGT...CATTCCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS-3UTR CAA 90 bp | TCCCGTGGCTGTGGTCAACCTGTCGTTCAGTGCATTGTGCGGTCACATGGAATGTATTCTATGGCCAGCTaGCCTACTAATAGCAGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SRGCGQPVVQCIVRSHGMYSMAS*PTNSSN Trigger: ATTGCTGCTATTAGTAGGCAAGCTGGCCATAGAATA...CATTCCATGTGACCGCACAATGCACTGAACGACAGGTTGACCACAGCCACGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS-3UTR CAA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTTGTCTCCCTGCTCCATaGCGTCAGGGTCACACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: ANTQHLPKTIGKLARQWACLPAP*RQGHTA Trigger: GGCTGTGTGACCCTGACGCAATGGAGCAGGGAGACA...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS-3UTR CAA 90 bp | TGCTTCCAGTCCAGATGTGGACCACATCACCACAGCATCAGTGTGGCTCAGCACCGGGTAATCTCATTCTaGAGTCTCTCCAAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: CFQSRCGPHHHSISVAQHRVISF*SLSKKI Trigger: GATTTTCTTGGAGAGACTCAAGAATGAGATTACCCG...GTGCTGAGCCACACTGATGCTGTGGTGATGTGGTCCACATCTGGACTGGAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS TCA 90 bp | CCTTGCCTGCTCAACATGTCAGCCATGATATCCAAGGCTTCGAGCTaGACAGAAACATCTTCCTGCTTTGCTATTGCACTGGTAAGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PCLLNMSAMISKASS*TETSSCFAIALVRR Trigger: ACGCCTTACCAGTGCAATAGCAAAGCAGGAAGATGTTTCTGTTCAGCTCGAAGCCTTGGATATCATGGCTGACATGTTGAGCAGGCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
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| CDS CCA 90 bp | TTCCAACTCATGTCGTCATCGTCACTATATTCATCGTCACTCCCTTaGTCATCGTCGTCCCCACCGTCAGCATCCATAGCATTCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: FQLMSSSSLYSSSLP*SSSSPPSASIAFSS Trigger: AGATGAGAATGCTATGGATGCTGACGGTGGGGACGACGATGACCAAGGGAGTGACGATGAATATAGTGACGATGACGACATGAGTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS CCA 90 bp | GTCTCCCTGCTCCATTGCGTCAGGGTCACACAGCCAACTTTGCACTaGACGAGTTTGTTTCAGAAGAGACAGGTATGCATGAAAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: VSLLHCVRVTQPTLH*TSLFQKRQVCMKNI Trigger: GATGTTTTTCATGCATACCTGTCTCTTCTGAAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGACCCTGACGCAATGGAGCAGGGAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS CCA 90 bp | AAGTCCATGTACCCTAGATTGTTTGTTCCAGTGACAACCAGAGCTTaGAAAAAGTCTAGCATGGCACTGAGCGCTCCTCCCTGCAGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KSMYPRLFVPVTTRA*KKSSMALSAPPCSR Trigger: TCTACTGCAGGGAGGAGCGCTCAGTGCCATGCTAGACTTTTTCCAAGCTCTGGTTGTCACTGGAACAAACAATCTAGGGTACATGGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS TCA 90 bp | TTAAGGCCTGCCACCGATGCAGAGCTAATGATCTCCTTCAAAGAGTaGAGCAGAAGATACTGCCTTTTGGGCTGGCTGGTTATTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRPATDAELMISFKE*SRRYCLLGWLVISC Trigger: GCAAGAAATAACCAGCCAGCCCAAAAGGCAGTATCTTCTGCTTCACTCTTTGAAGGAGATCATTAGCTCTGCATCGGTGGCAGGCCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS-3UTR CAA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGCACGATCGTCTCCACTaGGTACTCTTTCACTTTACT | + |
|
Preference number: 5 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLHDRLH*VLFHFT Trigger: AGTAAAGTGAAAGAGTACCAAGTGGAGACGATCGTG...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS-3UTR CAA 90 bp | GCTCTTCCAGGAACACCTCAAAGATGGAGGCAGTATGCAAGGAGCTCACAGAATATGAGGATGGAAAACTaGAGGAGAGTGGTTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALPGTPQRWRQYARSSQNMRMEN*RRVVTE Trigger: CTCTGTAACCACTCTCCTCAAGTTTTCCATCCTCAT...ATTCTGTGAGCTCCTTGCATACTGCCTCCATCTTTGAGGTGTTCCTGGAAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | ACCAGCACCAGTCAATGCCCTTGGTTGGCATCACTGTACAATCAAAGCCAACAGTCCATGTACCCTAGATaGTTTGTTCCAGTGACAACC | + |
|
Preference number: 5 (lower is better) Translates to: TSTSQCPWLASLYNQSQQSMYPR*FVPVTT Trigger: GGTTGTCACTGGAACAAACAATCTAGGGTACATGGA...CTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS TCA 90 bp | CCTGAACATGAGGATGGAAAACTTGAGGAGAGTGGTTACAGAGGATaGCATACAGACACGACAGCGCATCAATCTTCAGGTTTGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PEHEDGKLEESGYRG*HTDTTAHQSSGLMS Trigger: GCTCATCAAACCTGAAGATTGATGCGCTGTCGTGTCTGTATGTCATCCTCTGTAACCACTCTCCTCAAGTTTTCCATCCTCATGTTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 90 bp | GGGCAGCTACACATTTGGCAATGGAATAATAAGACTGCTTATGAGTaGGAGCAGTGCTCTGAGAATAAACTGGACCCGTTAGCATGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQLHIWQWNNKTAYE*EQCSENKLDPLACA Trigger: TGCGCATGCTAACGGGTCCAGTTTATTCTCAGAGCACTGCTCTCACTCATAAGCAGTCTTATTATTCCATTGCCAAATGTGTAGCTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 90 bp | TCATTCAGTGAGAAAATGATTCCTGGTACCAGTACAGGAATGTGCTaGGTTAGTGCTCCCGGCAGCACATTTACCAGCTCAGTTAACATG | + |
|
Preference number: 5 (lower is better) Translates to: SFSEKMIPGTSTGMC*VSAPGSTFTSSVNM Trigger: CATGTTAACTGAGCTGGTAAATGTGCTGCCGGGAGCACTAACCCAGCACATTCCTGTACTGGTACCAGGAATCATTTTCTCACTGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 90 bp | TCTCCTTCAAAGAGTGAAGCAGAAGATACTGCCTTTTGGGCTGGCTaGTTATTTCTTGCAGTACAAAGGGCAGATACTCAGGAAGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SPSKSEAEDTAFWAG*LFLAVQRADTQEGC Trigger: GCAACCTTCCTGAGTATCTGCCCTTTGTACTGCAAGAAATAACCAGCCAGCCCAAAAGGCAGTATCTTCTGCTTCACTCTTTGAAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTTCTCGCAGCTGCTCCTaGTCAGAAAGCATGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ANTQHLPKTIGKLARQWASRSCS*SESMLV Trigger: CACCAACATGCTTTCTGACAAGGAGCAGCTGCGAGA...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | ATAAGCCAGTGCATAATCCAAAGCCTCACCAGCACCAGTCAATGCCCTTGGTTGTGTAGGTCCTTGTTGTaGACATGGAGTCATTTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ISQCIIQSLTSTSQCPWLCRSLL*TWSHFW Trigger: CCAAAAATGACTCCATGTCAACAACAAGGACCTACA...CAACCAAGGGCATTGACTGGTGCTGGTGAGGCTTTGGATTATGCACTGGCTTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | ACCAGCACCAGTCAATGCCCTTGGTTGGCATCACTGTACAATCAAAGCCAACAGTTCTCTTTCATCTGCTaGTGCAGGGCTTTAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: TSTSQCPWLASLYNQSQQFSFIC*CRALTM Trigger: CATTGTTAAAGCCCTGCACAAGCAGATGAAAGAGAA...CTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | ACCAGCACCAGTCAATGCCCTTGGTTGGCATCACTGTACAATCAAAGCCAACAGGTATGTAGGTCCTTGTaGTTGACATGGAGTCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSTSQCPWLASLYNQSQQVCRSL*LTWSHF Trigger: AAAATGACTCCATGTCAACAACAAGGACCTACATAC...CTGTTGGCTTTGATTGTACAGTGATGCCAACCAAGGGCATTGACTGGTGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS GCA 90 bp | TTCACTTTACTCACCAAAGGGCCAAGGCATTTGACAGCTAAGTTCTaGACTTCGCCATTTTTATCCTCCAGCAACCTGAGAATCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTLLTKGPRHLTAKF*TSPFLSSSNLRIIF Trigger: GAAGATGATTCTCAGGTTGCTGGAGGATAAAAATGGCGAAGTGCAGAACTTAGCTGTCAAATGCCTTGGCCCTTTGGTGAGTAAAGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS-3UTR CAA 90 bp | GCAAATACTCAACACTTACCAAAGACAATAGGTAAGTTAGCTCGCCAATGGGCTGTCACACAGCCAACTTaGCACTGGACGAGTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ANTQHLPKTIGKLARQWAVTQPT*HWTSLF Trigger: AAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGAC...AGCCCATTGGCGAGCTAACTTACCTATTGTCTTTGGTAAGTGTTGAGTATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACACCTTTCCTTGACTTCTaGATCAATGTCAGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KCPKKTKSFGGSQATFLTPFLDF*INVSCF Trigger: AAAGCAGCTGACATTGATCAAGAAGTCAAGGAAAGG...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS GCA 90 bp | ATCCAAGGCTTCGAGCTGAACAGAAACATCTTCCTGCTTTGCTATTaGACTGGTAAGGCGTCCAGTAATCTTTTTACATACATTAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IQGFELNRNIFLLCY*TGKASSNLFTYISS Trigger: GCTGCTAATGTATGTAAAAAGATTACTGGACGCCTTACCAGTGCAATAGCAAAGCAGGAAGATGTTTCTGTTCAGCTCGAAGCCTTGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS-3UTR CAA 90 bp | AAATGCCCTAAGAAAACCAAATCCTTCGGGGGAAGCCAAGCCACCTTTCTAACAAAATCAGGACCCAAATaGTCTCCAAGATTGCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: KCPKKTKSFGGSQATFLTKSGPK*SPRLQI Trigger: TATTTGCAATCTTGGAGACAATTTGGGTCCTGATTT...TGTTAGAAAGGTGGCTTGGCTTCCCCCGAAGGATTTGGTTTTCTTAGGGCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS GCA 90 bp | CATGATATCCAAGGCTTCGAGCTGAACAGAAACATCTTCCTGCTTTaGTATTGCACTGGTAAGGCGTCCAGTAATCTTTTTACATACATT | + |
|
Preference number: 5 (lower is better) Translates to: HDIQGFELNRNIFLL*YCTGKASSNLFTYI Trigger: AATGTATGTAAAAAGATTACTGGACGCCTTACCAGTGCAATAGCAAAGCAGGAAGATGTTTCTGTTCAGCTCGAAGCCTTGGATATCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS-3UTR CAA 90 bp | TGTAAACTACGTTGTGTGCACAGAAAGAAGAGTGCTCTTATTTTTGGAATAGCTATTTTCTCCAGCAAGTaGGAGATGTGGTACGAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CKLRCVHRKKSALIFGIAIFSSK*EMWYEA Trigger: CGCTTCGTACCACATCTCCAACTTGCTGGAGAAAAT...AGCTATTCCAAAAATAAGAGCACTCTTCTTTCTGTGCACACAACGTAGTTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCCTGTCATCGTCCAGCTaGATAGAGTCTTTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TECWIQFQLQGKQLQKLCLSSSS*IESFCS Trigger: GCTGCAGAAAGACTCTATCAAGCTGGACGATGACAG...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTTTATGGGCCGCAGAATaGAATGTGACCAAGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RYWTLFPHFINPSFKFPFLWAAE*NVTKAT Trigger: AGTGGCCTTGGTCACATTCAATTCTGCGGCCCATAA...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS GCA 90 bp | CTAGGGGATGAGAAAGCCTCTAATATTACAGATTTTAATTCCAACTaGCCACTTAAGTCAATATGGTGTCCAACTTCTCCAAGAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGDEKASNITDFNSN*PLKSIWCPTSPRER Trigger: CCTTTCTCTTGGAGAAGTTGGACACCATATTGACTTAAGTGGGCAGTTGGAATTAAAATCTGTAATATTAGAGGCTTTCTCATCCCCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTAGAAGATACTGCCTTTaGGGCTGGCTGGTTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: RYWTLFPHFINPSFKFPFRRYCL*GWLVIS Trigger: AGAAATAACCAGCCAGCCCAAAAGGCAGTATCTTCT...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCGACATGGAGTCATTTTaGGACAACTCTGACAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: TECWIQFQLQGKQLQKLCDMESF*DNSDNR Trigger: TCTGTTGTCAGAGTTGTCCAAAAATGACTCCATGTC...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | AGATACTGGACCCTATTTCCACATTTCATAAATCCAAGCTTTAAGTTCCCATTTTCCATTGATTCCAAGTaGGTGGACGAAGAATCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RYWTLFPHFINPSFKFPFSIDSK*VDEESF Trigger: GAAAGATTCTTCGTCCACCAACTTGGAATCAATGGA...AAATGGGAACTTAAAGCTTGGATTTATGAAATGTGGAAATAGGGTCCAGTATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS-3UTR CAA 90 bp | ACAGAATGTTGGATACAATTTCAACTACAAGGGAAACAATTGCAAAAGCTTTGCCATCAATCTTCAGGTTaGATGAGCTGGACTTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: TECWIQFQLQGKQLQKLCHQSSG*MSWTYH Trigger: ATGATAAGTCCAGCTCATCAAACCTGAAGATTGATG...GCAAAGCTTTTGCAATTGTTTCCCTTGTAGTTGAAATTGTATCCAACATTCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 72 bp | TCTGCAGCATTGTTAGGGGCGTGTCTCCCTGCTCCATaGCGTCAGGGTCACACAGCCAACTTTGCACTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SAALLGACLPAP*RQGHTANFALD Trigger: GTCCAGTGCAAAGTTGGCTGTGTGACCCTGACGCAATGGAGCAGGGAGACACGCCCCTAACAATGCTGCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 90 bp | GGCCACCACCGGAGGGACCAGAGCCTGAACATGAGGATGGAAAACTaGAGGAGAGTGGTTACAGAGGATGACATACAGACACGACAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GHHRRDQSLNMRMEN*RRVVTEDDIQTRQR Trigger: GCGCTGTCGTGTCTGTATGTCATCCTCTGTAACCACTCTCCTCAAGTTTTCCATCCTCATGTTCAGGCTCTGGTCCCTCCGGTGGTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | CTCTCCCAGCACAGGCCTCAGATCTATCTTCAAAGGTaGCCCAGCAATCAGGGTCAGCGCTTTGACGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: LSQHRPQIYLQR*PSNQGQRFDGR Trigger: ACGACCGTCAAAGCGCTGACCCTGATTGCTGGGTCACCTTTGAAGATAGATCTGAGGCCTGTGCTGGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 90 bp | GAACCTGACTCTGCAGCATTGTTAGGGGCGTGTCTCCCTGCTCCATaGCGTCAGGGTCACACAGCCAACTTTGCACTGGACGAGTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: EPDSAALLGACLPAP*RQGHTANFALDEFV Trigger: AACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGACCCTGACGCAATGGAGCAGGGAGACACGCCCCTAACAATGCTGCAGAGTCAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 72 bp | ATGGCTGCCAGCTCCGGGTTGGAGCTGATCTGTGACTaGAATTCACTCATAAGAGGGCTCTTCTCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: MAASSGLELICD*NSLIRGLFSAS Trigger: AGAGGCAGAGAAGAGCCCTCTTATGAGTGAATTCCAGTCACAGATCAGCTCCAACCCGGAGCTGGCAGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | ATCTGCTTGTGCAGGGCTTTAACAATGTTGGGAACCTaGCTCTGCAGCATTGTTAGGGGCGTGTCTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ICLCRALTMLGT*LCSIVRGVSPC Trigger: GCAGGGAGACACGCCCCTAACAATGCTGCAGAGTCAGGTTCCCAACATTGTTAAAGCCCTGCACAAGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | AAAGATGGCTGCCAGCTCCGGGTTGGAGCTGATCTGTaGCTGGAATTCACTCATAAGAGGGCTCTTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: KDGCQLRVGADL*LEFTHKRALLC Trigger: GCAGAGAAGAGCCCTCTTATGAGTGAATTCCAGTCACAGATCAGCTCCAACCCGGAGCTGGCAGCCATCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 90 bp | GGGCGTGTCTCCCTGCTCCATTGCGTCAGGGTCACACAGCCAACTTaGCACTGGACGAGTTTGTTTCAGAAGAGACAGGTATGCATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GRVSLLHCVRVTQPT*HWTSLFQKRQVCMK Trigger: TTTCATGCATACCTGTCTCTTCTGAAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGACCCTGACGCAATGGAGCAGGGAGACACGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS GCA 72 bp | CCCTGCTCCATTGCGTCAGGGTCACACAGCCAACTTTaGACTGGACGAGTTTGTTTCAGAAGAGACAGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PCSIASGSHSQL*TGRVCFRRDRY Trigger: ATACCTGTCTCTTCTGAAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGACCCTGACGCAATGGAGCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS GCA 72 bp | TGGAAAAAGTCTAGCATGGCACTGAGCGCTCCTCCCTaGAGTAGAGGCGATCTCACAAGTCCAATCAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: WKKSSMALSAPP*SRGDLTSPISS Trigger: TGAACTGATTGGACTTGTGAGATCGCCTCTACTGCAGGGAGGAGCGCTCAGTGCCATGCTAGACTTTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 72 bp | GAGTCCAGAAGGTCCCGTATCAGTGATGGCTTGTTATaGGCCGCAGAATTGAATGTGACCAAGGCCACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ESRRSRISDGLL*AAELNVTKATL Trigger: AAGAGTGGCCTTGGTCACATTCAATTCTGCGGCCCATAACAAGCCATCACTGATACGGGACCTTCTGGACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 72 bp | TCCCTGCTCCATTGCGTCAGGGTCACACAGCCAACTTaGCACTGGACGAGTTTGTTTCAGAAGAGACAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLLHCVRVTQPT*HWTSLFQKRQV Trigger: TACCTGTCTCTTCTGAAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGACCCTGACGCAATGGAGCAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 72 bp | AGAACTGAGTCCAGAAGGTCCCGTATCAGTGATGGCTaGTTATGGGCCGCAGAATTGAATGTGACCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTESRRSRISDG*LWAAELNVTKA Trigger: GGCCTTGGTCACATTCAATTCTGCGGCCCATAACAAGCCATCACTGATACGGGACCTTCTGGACTCAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 90 bp | CTGAGAATCATCTTCACAACTTTCCTCTCGCTGTCATCGTCCAGCTaGATAGAGTCTTTCTGCAGCTCTGTCATCAGGTCGTTGGTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRIIFTTFLSLSSSS*IESFCSSVIRSLVA Trigger: GGCGACCAACGACCTGATGACAGAGCTGCAGAAAGACTCTATCAAGCTGGACGATGACAGCGAGAGGAAAGTTGTGAAGATGATTCTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS CAA 90 bp | CTCAGATCTATCTTCAAAGGTGACCCAGCAATCAGGGTCAGCGCTTaGACGGTCGTTAGCCGGGTAATCTCATTCTTGAGTCTCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LRSIFKGDPAIRVSA*TVVSRVISFLSLSK Trigger: CTTGGAGAGACTCAAGAATGAGATTACCCGGCTAACGACCGTCAAAGCGCTGACCCTGATTGCTGGGTCACCTTTGAAGATAGATCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | GCCACCGATGCAGAGCTAATGATCTCCTTCAAAGAGTaGAGCAGAAGATACTGCCTTTTGGGCTGGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ATDAELMISFKE*SRRYCLLGWLV Trigger: AACCAGCCAGCCCAAAAGGCAGTATCTTCTGCTTCACTCTTTGAAGGAGATCATTAGCTCTGCATCGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | CTTTCTGCAGCTCTGTCATCAGGTCGTTGGTCGCCATaGACCTTCGCCAAAGAGAAGGATCCAAAGAGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSAALSSGRWSP*TFAKEKDPKRK Trigger: CTTTCTCTTTGGATCCTTCTCTTTGGCGAAGGTTCATGGCGACCAACGACCTGATGACAGAGCTGCAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126373.2 |
||
| CDS GCA 72 bp | AGTGAGAAAATGATTCCTGGTACCAGTACAGGAATGTaGTGGGTTAGTGCTCCCGGCAGCACATTTACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SEKMIPGTSTGM*WVSAPGSTFTS Trigger: GCTGGTAAATGTGCTGCCGGGAGCACTAACCCAGCACATTCCTGTACTGGTACCAGGAATCATTTTCTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 72 bp | CTCCATTGCGTCAGGGTCACACAGCCAACTTTGCACTaGACGAGTTTGTTTCAGAAGAGACAGGTATGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LHCVRVTQPTLH*TSLFQKRQVCM Trigger: CATGCATACCTGTCTCTTCTGAAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGACCCTGACGCAATGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 72 bp | GAGAAAATGATTCCTGGTACCAGTACAGGAATGTGCTaGGTTAGTGCTCCCGGCAGCACATTTACCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: EKMIPGTSTGMC*VSAPGSTFTSS Trigger: TGAGCTGGTAAATGTGCTGCCGGGAGCACTAACCCAGCACATTCCTGTACTGGTACCAGGAATCATTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 72 bp | TACCCTAGATTGTTTGTTCCAGTGACAACCAGAGCTTaGAAAAAGTCTAGCATGGCACTGAGCGCTCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: YPRLFVPVTTRA*KKSSMALSAPP Trigger: GGGAGGAGCGCTCAGTGCCATGCTAGACTTTTTCCAAGCTCTGGTTGTCACTGGAACAAACAATCTAGGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 72 bp | ATCTTCAAAGGTGACCCAGCAATCAGGGTCAGCGCTTaGACGGTCGTTAGCCGGGTAATCTCATTCTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: IFKGDPAIRVSA*TVVSRVISFLS Trigger: ACTCAAGAATGAGATTACCCGGCTAACGACCGTCAAAGCGCTGACCCTGATTGCTGGGTCACCTTTGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 90 bp | TTTCCAACTCATGTCGTCATCGTCACTATATTCATCGTCACTCCCTaGGTCATCGTCGTCCCCACCGTCAGCATCCATAGCATTCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: FPTHVVIVTIFIVTP*VIVVPTVSIHSILI Trigger: GATGAGAATGCTATGGATGCTGACGGTGGGGACGACGATGACCAAGGGAGTGACGATGAATATAGTGACGATGACGACATGAGTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | CAAGCAGTCCTCCTTGCCTGCTCAACATGTCAGCCATaGTATCCAAGGCTTCGAGCTGAACAGAAACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: QAVLLACSTCQP*YPRLRAEQKHL Trigger: AAGATGTTTCTGTTCAGCTCGAAGCCTTGGATATCATGGCTGACATGTTGAGCAGGCAAGGAGGACTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS GCA 72 bp | CTCACCAAAGGGCCAAGGCATTTGACAGCTAAGTTCTaGACTTCGCCATTTTTATCCTCCAGCAACCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTKGPRHLTAKF*TSPFLSSSNLR Trigger: TCTCAGGTTGCTGGAGGATAAAAATGGCGAAGTGCAGAACTTAGCTGTCAAATGCCTTGGCCCTTTGGTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS GCA 72 bp | GAGCAGTGCTCTGAGAATAAACTGGACCCGTTAGCATaGGCAGCAAGTCCATGTACCCTAGATTGTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: EQCSENKLDPLA*AASPCTLDCLF Trigger: GAACAAACAATCTAGGGTACATGGACTTGCTGCGCATGCTAACGGGTCCAGTTTATTCTCAGAGCACTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 72 bp | ATCTTCACAACTTTCCTCTCGCTGTCATCGTCCAGCTaGATAGAGTCTTTCTGCAGCTCTGTCATCAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: IFTTFLSLSSSS*IESFCSSVIRS Trigger: CGACCTGATGACAGAGCTGCAGAAAGACTCTATCAAGCTGGACGATGACAGCGAGAGGAAAGTTGTGAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
||
| CDS CAA 72 bp | TGCAGTAGAGGCGATCTCACAAGTCCAATCAGTTCATaGAGGATAGATCCGCTTATCTTGGACAGGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CSRGDLTSPISS*RIDPLILDREE Trigger: CTCCTCCCTGTCCAAGATAAGCGGATCTATCCTCAATGAACTGATTGGACTTGTGAGATCGCCTCTACTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 72 bp | CCCGTTAGCATGCGCAGCAAGTCCATGTACCCTAGATaGTTTGTTCCAGTGACAACCAGAGCTTGGAAAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PVSMRSKSMYPR*FVPVTTRAWKK Trigger: CTTTTTCCAAGCTCTGGTTGTCACTGGAACAAACAATCTAGGGTACATGGACTTGCTGCGCATGCTAACGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 72 bp | CAGAAGATACTGCCTTTTGGGCTGGCTGGTTATTTCTaGCAGTACAAAGGGCAGATACTCAGGAAGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QKILPFGLAGYF*QYKGQILRKVA Trigger: GGCAACCTTCCTGAGTATCTGCCCTTTGTACTGCAAGAAATAACCAGCCAGCCCAAAAGGCAGTATCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 90 bp | CTCCATTGCGTCAGGGTCACACAGCCAACTTTGCACTGGACGAGTTaGTTTCAGAAGAGACAGGTATGCATGAAAAACATCTGCCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LHCVRVTQPTLHWTS*FQKRQVCMKNICLY Trigger: GTAAAGGCAGATGTTTTTCATGCATACCTGTCTCTTCTGAAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGACCCTGACGCAATGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | GAGGATGGAAAACTTGAGGAGAGTGGTTACAGAGGATaGCATACAGACACGACAGCGCATCAATCTTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: EDGKLEESGYRG*HTDTTAHQSSG Trigger: ACCTGAAGATTGATGCGCTGTCGTGTCTGTATGTCATCCTCTGTAACCACTCTCCTCAAGTTTTCCATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | GCAGCAAGTCCATGTACCCTAGATTGTTTGTTCCAGTaGCAACCAGAGCTTGGAAAAAGTCTAGCATGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: AASPCTLDCLFQ*QPELGKSLAWH Trigger: GTGCCATGCTAGACTTTTTCCAAGCTCTGGTTGTCACTGGAACAAACAATCTAGGGTACATGGACTTGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS GCA 72 bp | AGAAGATACTGCCTTTTGGGCTGGCTGGTTATTTCTTaGAGTACAAAGGGCAGATACTCAGGAAGGTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RRYCLLGWLVIS*STKGRYSGRLP Trigger: AGGCAACCTTCCTGAGTATCTGCCCTTTGTACTGCAAGAAATAACCAGCCAGCCCAAAAGGCAGTATCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CCA 72 bp | TCCATTGATTCCAAGTTGGTGGACGAAGAATCTTTCTaGATACTTTCAAAGATGGCTGCCAGCTCCGGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SIDSKLVDEESF*ILSKMAASSGL Trigger: CAACCCGGAGCTGGCAGCCATCTTTGAAAGTATCCAGAAAGATTCTTCGTCCACCAACTTGGAATCAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS CAA 90 bp | AGAGTGAAGCAGAAGATACTGCCTTTTGGGCTGGCTGGTTATTTCTaGCAGTACAAAGGGCAGATACTCAGGAAGGTTGCCTACACTAAT | + |
|
Preference number: 6 (lower is better) Translates to: RVKQKILPFGLAGYF*QYKGQILRKVAYTN Trigger: ATTAGTGTAGGCAACCTTCCTGAGTATCTGCCCTTTGTACTGCAAGAAATAACCAGCCAGCCCAAAAGGCAGTATCTTCTGCTTCACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
||
| CDS TCA 72 bp | CTCAACATGTCAGCCATGATATCCAAGGCTTCGAGCTaGACAGAAACATCTTCCTGCTTTGCTATTGCACTG | + |
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Preference number: 6 (lower is better) Translates to: LNMSAMISKASS*TETSSCFAIAL Trigger: CAGTGCAATAGCAAAGCAGGAAGATGTTTCTGTTCAGCTCGAAGCCTTGGATATCATGGCTGACATGTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
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| CDS CAA 72 bp | GTCAGGGTCACACAGCCAACTTTGCACTGGACGAGTTaGTTTCAGAAGAGACAGGTATGCATGAAAAACATC | + |
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Preference number: 6 (lower is better) Translates to: VRVTQPTLHWTS*FQKRQVCMKNI Trigger: GATGTTTTTCATGCATACCTGTCTCTTCTGAAACAAACTCGTCCAGTGCAAAGTTGGCTGTGTGACCCTGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS CAA 90 bp | ATCAGGGTCAGCGCTTTGACGGTCGTTAGCCGGGTAATCTCATTCTaGAGTCTCTCCAAGAAAATCTGTAGGGTATTTGATAAATCAGGA | + |
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Preference number: 6 (lower is better) Translates to: IRVSALTVVSRVISF*SLSKKICRVFDKSG Trigger: TCCTGATTTATCAAATACCCTACAGATTTTCTTGGAGAGACTCAAGAATGAGATTACCCGGCTAACGACCGTCAAAGCGCTGACCCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS GCA 72 bp | CAAGGCTTCGAGCTGAACAGAAACATCTTCCTGCTTTaGTATTGCACTGGTAAGGCGTCCAGTAATCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: QGFELNRNIFLL*YCTGKASSNLF Trigger: AAAAAGATTACTGGACGCCTTACCAGTGCAATAGCAAAGCAGGAAGATGTTTCTGTTCAGCTCGAAGCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020315.13 ENSMUST00000126373.2 |
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| CDS TCA 72 bp | CACATTTGGCAATGGAATAATAAGACTGCTTATGAGTaGGAGCAGTGCTCTGAGAATAAACTGGACCCGTTA | + |
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Preference number: 6 (lower is better) Translates to: HIWQWNNKTAYE*EQCSENKLDPL Trigger: TAACGGGTCCAGTTTATTCTCAGAGCACTGCTCTCACTCATAAGCAGTCTTATTATTCCATTGCCAAATGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS CAA 72 bp | TATCTTTTCAAGGTATTCACCTATTCTATGGCCAGCTaGCCTACTAATAGCAGCAATACACTGTATGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: YLFKVFTYSMAS*PTNSSNTLYVG Trigger: ACCTACATACAGTGTATTGCTGCTATTAGTAGGCAAGCTGGCCATAGAATAGGTGAATACCTTGAAAAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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| CDS GCA 72 bp | GAGAAAGCCTCTAATATTACAGATTTTAATTCCAACTaGCCACTTAAGTCAATATGGTGTCCAACTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EKASNITDFNSN*PLKSIWCPTSP Trigger: TGGAGAAGTTGGACACCATATTGACTTAAGTGGGCAGTTGGAATTAAAATCTGTAATATTAGAGGCTTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020315.13 |
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