Pregenerated sensors for CAMSAP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044433Ensembl transcript IDs: ENSMUST00000057028.15, ENSMUST00000171962.3, ENSMUST00000207077.2, ENSMUST00000207152.2, ENSMUST00000207432.2, ENSMUST00000207533.2, ENSMUST00000207712.2, ENSMUST00000207970.2, ENSMUST00000208036.2, ENSMUST00000208240.2
Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCACAGCATGACCAGACAGGACCCAGGAGTGCACTGCCCAAGGTaGGCACTATTTGGGGGTACCGCCACCCTTCTTGGGCGTGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: PHSMTRQDPGVHCPR*ALFGGTATLLGRGG Trigger: CCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCCCACCTTGGGCAGTGCACTCCTGGGTCCTGTCTGGTCATGCTGTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CCA 90 bp | GACCAGACAGGACCCAGGAGTGCACTGCCCAAGGTGGGCACTATTTaGGGGTACCGCCACCCTTCTTGGGCGTGGTGGGCTTCTTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: DQTGPRSALPKVGTI*GYRHPSWAWWASCF Trigger: AAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCCCACCTTGGGCAGTGCACTCCTGGGTCCTGTCTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR TCA 90 bp | TGCGATCCGAGTTGTACTTATAGATGCCTTCGACCATGGCAGGAGTaGCGGTCCGAGGCCCATAGCCTGCCAGCCTCGATAGCTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: CDPSCTYRCLRPWQE*RSEAHSLPASIAPL Trigger: CAGAGGAGCTATCGAGGCTGGCAGGCTATGGGCCTCGGACCGTCACTCCTGCCATGGTCGAAGGCATCTATAAGTACAACTCGGATCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR GCA 90 bp | TTGGGGGTACCGCCACCCTTCTTGGGCGTGGTGGGCTTCTTGCTTTaGCAAAGGTGTCCCTGGATAGTGAAGGCGTCTACACTCATAGAC | + |
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Preference number: 1 (lower is better) Translates to: LGVPPPFLGVVGFLL*QRCPWIVKASTLID Trigger: GTCTATGAGTGTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCACAGCATGACCAGACAGGACCCAGGAGTGCACTGCCCAAGGTGGGCACTAGGGGCTCATTCACCTTaGCTGCCAGGCAGCAGTGTG | + |
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Preference number: 2 (lower is better) Translates to: PHSMTRQDPGVHCPRWALGAHSP*LPGSSV Trigger: CACACTGCTGCCTGGCAGGCAAGGTGAATGAGCCCC...TAGTGCCCACCTTGGGCAGTGCACTCCTGGGTCCTGTCTGGTCATGCTGTGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CAA 90 bp | TGCACTGCCCAAGGTGGGCACTATTTGGGGGTACCGCCACCCTTCTaGGGCGTGGTGGGCTTCTTGCTTTGCCAAAGGTGTCCCTGGATA | + |
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Preference number: 2 (lower is better) Translates to: CTAQGGHYLGVPPPF*GVVGFLLCQRCPWI Trigger: TATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCCCACCTTGGGCAGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CAA 90 bp | CACTATTTGGGGGTACCGCCACCCTTCTTGGGCGTGGTGGGCTTCTaGCTTTGCCAAAGGTGTCCCTGGATAGTGAAGGCGTCTACACTC | + |
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Preference number: 2 (lower is better) Translates to: HYLGVPPPFLGVVGF*LCQRCPWIVKASTL Trigger: GAGTGTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CAA 90 bp | TTTGGGGGTACCGCCACCCTTCTTGGGCGTGGTGGGCTTCTTGCTTaGCCAAAGGTGTCCCTGGATAGTGAAGGCGTCTACACTCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: FGGTATLLGRGGLLA*PKVSLDSEGVYTHR Trigger: TCTATGAGTGTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCACAGCATGACCAGACAGGACCCAGGAGTGCACTGCCCAAGGTGGGCACTAGGAAGTGGTTGGCCTTaGTTTTCTCGATTTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: PHSMTRQDPGVHCPRWALGSGWP*FSRFPL Trigger: TAGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCC...TAGTGCCCACCTTGGGCAGTGCACTCCTGGGTCCTGTCTGGTCATGCTGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR TCA 90 bp | CAGTGTGACAAGGCATTGTGGATGATAAACTTGTTAGACTTGGCGCTGGGTTCCGGCGGCTTGGAGACATaGGGCCTGATGGAGAAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: QCDKALWMINLLDLALGSGGLET*GLMEKG Trigger: CCCCTTCTCCATCAGGCCTCATGTCTCCAAGCCGCC...GGAACCCAGCGCCAAGTCTAACAAGTTTATCATCCACAATGCCTTGTCACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTTGCCAAAGGTGTCCCTGGATAGTGAAGGCGTCTACACTCATAGACATGGTAGTCACGTTCTCGACTaGCAGGCAGGCGGCTTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: ALPKVSLDSEGVYTHRHGSHVLD*QAGGLE Trigger: CTCCAAGCCGCCTGCCTGGCAGTCGAGAACGTGACT...ACCATGTCTATGAGTGTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGTACCGCCACCCTTCTTGGGCGTGGTGGGCTTCTTGCTTTGCCAAAGGTGTAAGAGAATCAGGAAGTaGTTGGCCTTGCTTTTCTCG | + |
|
Preference number: 2 (lower is better) Translates to: GVPPPFLGVVGFLLCQRCKRIRK*LALLFS Trigger: CGAGAAAAGCAAGGCCAACCACTTCCTGATTCTCTT...ACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGCATGACCAGACAGGACCCAGGAGTGCACTGCCCAAGGTGGGCACTATTAGAATTCTGTTCTTCTaGGGCTCATTCACCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PQHDQTGPRSALPKVGTIRILFF*GSFTLP Trigger: AGGCAAGGTGAATGAGCCCCAGAAGAACAGAATTCT...AATAGTGCCCACCTTGGGCAGTGCACTCCTGGGTCCTGTCTGGTCATGCTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CAA 90 bp | AGGCAGCAGTGTGACAAGGCATTGTGGATGATAAACTTGTTAGACTaGGCGCTGGGTTCCTTGTATAGCCGGGGACCTGTGTACTCAGGC | + |
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Preference number: 2 (lower is better) Translates to: RQQCDKALWMINLLD*ALGSLYSRGPVYSG Trigger: GCCTGAGTACACAGGTCCCCGGCTATACAAGGAACCCAGCGCCAAGTCTAACAAGTTTATCATCCACAATGCCTTGTCACACTGCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR TCA 90 bp | CCCGAAAGAGAATCAGGAAGTGGTTGGCCTTGCTTTTCTCGATTTCCTCTAGAATGGAGACATGAGGCCTaGTGGAGAAGGGGCCCGAGA | + |
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Preference number: 2 (lower is better) Translates to: PERESGSGWPCFSRFPLEWRHEA*WRRGPR Trigger: TCTCGGGCCCCTTCTCCATCAGGCCTCATGTCTCCA...TTCTAGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCCTGATTCTCTTTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR TCA 72 bp | TCGACTGCCAGGCAGGCGGCTTGGAGACATGAGGCCTaGTGGAGAAGGGGCCCGAGAGGTGGGCCTCTTCAC | + |
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Preference number: 3 (lower is better) Translates to: STARQAAWRHEA*WRRGPRGGPLH Trigger: GTGAAGAGGCCCACCTCTCGGGCCCCTTCTCCATCAGGCCTCATGTCTCCAAGCCGCCTGCCTGGCAGTCGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CCA 72 bp | GGACCCAGGAGTGCACTGCCCAAGGTGGGCACTATTTaGGGGTACCGCCACCCTTCTTGGGCGTGGTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: GPRSALPKVGTI*GYRHPSWAWWA Trigger: AGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCCCACCTTGGGCAGTGCACTCCTGGGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CCA 72 bp | ATGACCAGACAGGACCCAGGAGTGCACTGCCCAAGGTaGGCACTATTTGGGGGTACCGCCACCCTTCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: MTRQDPGVHCPR*ALFGGTATLLG Trigger: CCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCCCACCTTGGGCAGTGCACTCCTGGGTCCTGTCTGGTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CCA 72 bp | GGCACTATTTGGGGGTACCGCCACCCTTCTTGGGCGTaGTGGGCTTCTTGCTTTGCCAAAGGTGTCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GTIWGYRHPSWA*WASCFAKGVPG Trigger: TCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR GCA 72 bp | CCGCCACCCTTCTTGGGCGTGGTGGGCTTCTTGCTTTaGCAAAGGTGTCCCTGGATAGTGAAGGCGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: PPPFLGVVGFLL*QRCPWIVKAST Trigger: TGTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CCA 72 bp | AAGGTGGGCACTATTTGGGGGTACCGCCACCCTTCTTaGGCGTGGTGGGCTTCTTGCTTTGCCAAAGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: KVGTIWGYRHPS*AWWASCFAKGV Trigger: GACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCCCACCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR CAA 90 bp | GCGATCCGAGTTGTACTTATAGATGCCTTCGACCATGGCAGGAGTGACGGTCCGCCCGGAACTGGCAGCTaGAGTCCCGAAAGAGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: AIRVVLIDAFDHGRSDGPPGTGS*SPERES Trigger: TGATTCTCTTTCGGGACTCAAGCTGCCAGTTCCGGG...CGGACCGTCACTCCTGCCATGGTCGAAGGCATCTATAAGTACAACTCGGATCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR TCA 72 bp | AGTTGTACTTATAGATGCCTTCGACCATGGCAGGAGTaGCGGTCCGAGGCCCATAGCCTGCCAGCCTCGATA | + |
|
Preference number: 3 (lower is better) Translates to: SCTYRCLRPWQE*RSEAHSLPASI Trigger: TATCGAGGCTGGCAGGCTATGGGCCTCGGACCGTCACTCCTGCCATGGTCGAAGGCATCTATAAGTACAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR CAA 90 bp | CCCGAAAGAGAATCAGGAAGTGGTTGGCCTTGCTTTTCTCGATTTCCTCTAGAATGGGGCTCATTCACCTaGCCTGCCAGGCAGCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: PERESGSGWPCFSRFPLEWGSFT*PARQQC Trigger: ACACTGCTGCCTGGCAGGCAAGGTGAATGAGCCCCA...TTCTAGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCCTGATTCTCTTTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR-3UTR CAA 90 bp | TTCTTGCTTTGCCAAAGGTGTCCCTGGATAGTGAAGGCGTCTACACTCATAGACTTGTGGATGATAAACTaGTTAGACTTGGCGCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: FLLCQRCPWIVKASTLIDLWMIN*LDLALG Trigger: ACCCAGCGCCAAGTCTAACAAGTTTATCATCCACAA...GTCTATGAGTGTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| 3UTR CAA 72 bp | AGGACCCAGGAGTGCACTGCCCAAGGTGGGCACTATTaGGGGGTACCGCCACCCTTCTTGGGCGTGGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RTQECTAQGGHY*GVPPPFLGVVG Trigger: GCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCCCACCTTGGGCAGTGCACTCCTGGGTCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| CDS-3UTR TCA 90 bp | GGGGTACCGCCACCCTTCTTGGGCGTGGTGGGCTTCTTGCTTTGCCAAAGGTGTGACCTTGCTGAGCCGTaGACCTGGCGGCCTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GVPPPFLGVVGFLLCQRCDLAEP*TWRPPP Trigger: GGGAGGAGGCCGCCAGGTTCACGGCTCAGCAAGGTC...ACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGTTGGGCTGGGGCCTaGCCCAGGGCTGCGTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPCWAGA*PRAASG Trigger: GCCCGACGCAGCCCTGGGCCAGGCCCCAGCCCAACA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAAGCCTGGAGCCTCCTaGGCCAGCCTGGCGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPKPGAS*ASLAAS Trigger: GGAGGCCGCCAGGCTGGCTCAGGAGGCTCCAGGCTT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTCCTCGGCCTCCCCTaGAGCCTCCCGAGGCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLLGLP*SLPRLH Trigger: GTGCAGCCTCGGGAGGCTGCAGGGGAGGCCGAGGAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATACGGGGTGTTGGGCTaGGGCCTGGCCCAGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPYGVLG*GLAQGC Trigger: GCAGCCCTGGGCCAGGCCCCAGCCCAACACCCCGTA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAACAGCAACCAGAGCGTaGCCGGGTGGCCCTGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPTATRA*PGGPAP Trigger: GGGCGCAGGGCCACCCGGCCACGCTCTGGTTGCTGT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACAGCAGGCCGCGGGCTaGGCTTCGTGCCAAGGCCGA | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPQQAAG*ASCQGR Trigger: TCGGCCTTGGCACGAAGCCCAGCCCGCGGCCTGCTG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTCGAGCTGTGGCAGTaGCTGGCGCCAGGCCCGACA | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLELWQ*LAPGPT Trigger: TGTCGGGCCTGGCGCCAGGCACTGCCACAGCTCGAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGTGGCAGCCAGTGCTaGCCCACTGGCCAGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGGSQC*PTGQVL Trigger: CAGGACCTGGCCAGTGGGGCAGCACTGGCTGCCACC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGATGGCTCGAGCTGTaGCAGTGCCTGGCGCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGWLEL*QCLAPG Trigger: GCCTGGCGCCAGGCACTGCCACAGCTCGAGCCATCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGGGTGCTCAGGCAGTaGAGGCACCGTGCCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPWVLRQ*RHRAPP Trigger: AGGAGGGGCACGGTGCCTTCACTGCCTGAGCACCCA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGGCGGGTCCAGGAATaGCCCAGGCTGCAGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPWRVQE*PRLQVV Trigger: CACCACCTGCAGCCTGGGTCATTCCTGGACCCGCCA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGCCTCGCGCACTGGGTaGTCAGGCAGTGAAGGCACC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPASRTG*SGSEGT Trigger: GGTGCCTTCACTGCCTGAGCACCCAGTGCGCGAGGC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCCATCCAGAGGGGCTaGAGGAGATGCACGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPPIQRG*RRCTLG Trigger: GCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGATGGTGGCAGCCAGTaGTGCCCCACTGGCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPDGGSQ*CPTGQV Trigger: GACCTGGCCAGTGGGGCAGCACTGGCTGCCACCATC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGCAGCCTCCCGAGGCTaGACCTGCAGGAAAGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPAASRG*TCRKAL Trigger: GAGCGCTTTCCTGCAGGTGCAGCCTCGGGAGGCTGC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGCAGGGCTGGGGGATaGTGCTTTAGGCCCAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGRAGG*CFRPSG Trigger: GCCACTGGGCCTAAAGCAGCATCCCCCAGCCCTGCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR GCA 90 bp | GGATGCATTGCTTCCATTCTCCCAGTCACGTTCTCGACTGCCAGGCAGGCGGCTTCCTTCTCTGCCTCCTaGCACTGTTTGCGCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GCIASILPVTFSTARQAASFSAS*HCLRRR Trigger: CCGGCGGCGCAAACAGTGGCAGGAGGCAGAGAAGGA...AGCCGCCTGCCTGGCAGTCGAGAACGTGACTGGGAGAATGGAAGCAATGCATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAATCCCCAAGTCCCTCTaGGGGCACTGGGCCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPIPKSL*GHWAQV Trigger: GACCTGGGCCCAGTGCCCCCAGAGGGACTTGGGGAT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCAGGCTGCAGGTGGTaGGGCAGGTCCAGGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPPGCRW*GRSRSF Trigger: GAAGCTCCTGGACCTGCCCCACCACCTGCAGCCTGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCTCCTGAGCCAGCCTaGCGGCCTCCTCCCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPPPEPA*RPPPVS Trigger: AGAAACGGGAGGAGGCCGCCAGGCTGGCTCAGGAGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| 3UTR CAA 72 bp | GGGGTACCGCCACCCTTCTTGGGCGTGGTGGGCTTCTaGCTTTGCCAAAGGTGTCCCTGGATAGTGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GVPPPFLGVVGF*LCQRCPWIVKA Trigger: CGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGCGGCTTGGAGACATaGGGCCTGATGGAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGGLET*GLMEKG Trigger: CCCCTTCTCCATCAGGCCTCATGTCTCCAAGCCGCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGGAATGACCCAGGCTaGAGGTGGTGGGGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPRNDPG*RWWGRS Trigger: GGACCTGCCCCACCACCTGCAGCCTGGGTCATTCCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATCCTTCTCTGCCTCCTaGCACTGTTTGCGCCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPSFSAS*HCLRRR Trigger: CCGGCGGCGCAAACAGTGGCAGGAGGCAGAGAAGGA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207152.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGCGGGCTGGGCTTCGTaGCAAGGCCGAGTCATCACA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPAGWAS*QGRVIT Trigger: TGTGATGACTCGGCCTTGGCACGAAGCCCAGCCCGC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATCCCTCTGGGGGCACTaGGCCCAGGTCTGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPSLWGH*AQVWRE Trigger: TTCTCTCCAGACCTGGGCCCAGTGCCCCCAGAGGGA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTGGGGACCACCAGGTaGCAGAAGTGGGTGACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLGTTR*QKWVTE Trigger: TTCCGTCACCCACTTCTGTCACCTGGTGGTCCCCAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGCCAAAGGGAGTGCTaGACGACACAGCCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGQREC*TTQPGR Trigger: TCTCCCAGGCTGTGTCGTTCAGCACTCCCTTTGGCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACGGGGCTCAGCACTGTaGATGATCTGCAGGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPRGSAL*MICRAS Trigger: AGAGGCCCTGCAGATCATTCACAGTGCTGAGCCCCG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATTCCCCACCAGGAACTaGGCCCAGCTCAGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPFPTRN*AQLSFL Trigger: GAGGAAGCTGAGCTGGGCTCAGTTCCTGGTGGGGAA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGCTGTTGCTGGTCTGTaGGCCTCTGCATGTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPAVAGL*ASACPA Trigger: AGCGGGACATGCAGAGGCTCACAGACCAGCAACAGC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGGAGACATGAGGCCTaGTGGAGAAGGGGCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPWRHEA*WRRGPR Trigger: TCTCGGGCCCCTTCTCCATCAGGCCTCATGTCTCCA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGGGGCTGCAGGAGATaGACGCTGGGCTGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPRGCRR*TLGCFL Trigger: CAAGAAGCAGCCCAGCGTGCATCTCCTGCAGCCCCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTCTGCATGTCCCGCTaGAGAGAGCTCAGAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLCMSR*RELRAA Trigger: TGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGCCTCCTCCCGTTTCTaGTCCTTCTCTGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPASSRF*SFSASC Trigger: GCAGGAGGCAGAGAAGGAGCAGAAACGGGAGGAGGC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207152.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGTCACGTTCTCGACTaGCAGGCAGGCGGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPSHVLD*QAGGLE Trigger: CTCCAAGCCGCCTGCCTGGCAGTCGAGAACGTGACT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGGGCTCATTCACCTTaGCTGCCAGGCAGCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGAHSP*LPGSSV Trigger: CACACTGCTGCCTGGCAGGCAAGGTGAATGAGCCCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAACAGAGCAGAGGGACTaGGGGATGGCTCGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPTEQRD*GMARAV Trigger: CACAGCTCGAGCCATCCCCCAGTCCCTCTGCTCTGT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCTCGGAGTGGAGACTaGGGACCACCAGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPPRSGD*GPPGDR Trigger: TCTGTCACCTGGTGGTCCCCAGTCTCCACTCCGAGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGTGGATCCTCGGAGTaGAGACTGGGGACCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPCGSSE*RLGTTR Trigger: CCTGGTGGTCCCCAGTCTCCACTCCGAGGATCCACA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTGAACGACACAGCCTaGGAGAGGGGACGGCTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLNDTA*ERGRLS Trigger: GCTTAGCCGTCCCCTCTCCCAGGCTGTGTCGTTCAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACACCTCCTCCTCAGCTaGGGCCATGGCTCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPHLLLS*GHGSGS Trigger: ACTACCAGAGCCATGGCCCCAGCTGAGGAGGAGGTG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAAGGGGCCCGAGAGGTaGGCCTCTTCACACCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPKGPER*ASSHQG Trigger: ACCTTGGTGTGAAGAGGCCCACCTCTCGGGCCCCTT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACAGACATGGGGTCCTTaGGGCACACCTCCTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPQTWGP*GTPPQV Trigger: GACTTGAGGAGGTGTGCCTCAAGGACCCCATGTCTG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAATCAGACAGCGGCTTTaGGGCTCCTTCGGGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPIRQRL*GSFGRV Trigger: TACCCTCCCGAAGGAGCCTCAAAGCCGCTGTCTGAT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGGAGACCCCAATCCTaGCTCAGCCTCAGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPWRPQS*LSLSLH Trigger: GTGAAGGCTGAGGCTGAGTCAGGATTGGGGTCTCCA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACAGCTCACTCATCTCTaGGCTCAAGGCCTCAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPQLTHL*AQGLRC Trigger: GCACCTGAGGCCTTGAGCTCAGAGATGAGTGAGCTG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGGCTAGCTCGCTTCTaGGCCATCTCATCCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPRLARF*AISSSG Trigger: GCCTGAGGATGAGATGGCTCAGAAGCGAGCTAGCCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGGTCTGTGAGCCTCTaGATGTCCCGCTGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPWSVSL*MSRCRE Trigger: CTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGCTAGAAGCCGCTGTTaGTGGTCTGTGAGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPARSRC*WSVSLC Trigger: GCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGACTCGCCGCCGCCTTaGCTCGAGAGAAATCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPDSPPP*LERNRT Trigger: AGTACGATTTCTCTCGAGCCAAGGCGGCGGCGAGTC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAATAGCAGTGGATGGTaGCAGCCAGTGCTGCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPNSSGW*QPVLPH Trigger: GTGGGGCAGCACTGGCTGCCACCATCCACTGCTATT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGACAATAGCAGTGGATaGTGGCAGCCAGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPDNSSG*WQPVLP Trigger: GGGCAGCACTGGCTGCCACCATCCACTGCTATTGTC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGTAGGGGGAGAGTGGTaGTTTGGAGAGACCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPVGGEW*FGETLR Trigger: CCTGAGGGTCTCTCCAAACCACCACTCTCCCCCTAC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGGGTAGGGGGAGAGTaGTGGTTTGGAGAGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPRVGGE*WFGETL Trigger: GAGGGTCTCTCCAAACCACCACTCTCCCCCTACCCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGGGGAACCCTCGGATaGGGGTGGTGGTTTCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGGTLG*GWWFQY Trigger: ATACTGAAACCACCACCCCCATCCGAGGGTTCCCCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAATGAAGCCACAGCTTTaGGGGAACCCTCGGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPMKPQL*GNPRMG Trigger: CCCCATCCGAGGGTTCCCCCAAAGCTGTGGCTTCAT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACAGGTGCTACGGGGGTaGATGTTGGAGACCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPQVLRG*MLETPI Trigger: GATTGGGGTCTCCAACATCCACCCCCGTAGCACCTG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGTAAAGGCCAAGCCTaGAGCCTCCTGAGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPCKGQA*SLLSQP Trigger: AGGCTGGCTCAGGAGGCTCCAGGCTTGGCCTTTACA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACACCCTTCTTGGGCGTaGTGGGCTTCTTGCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPHPSWA*WASCFA Trigger: GGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| 3UTR CAA 72 bp | ACCGCCACCCTTCTTGGGCGTGGTGGGCTTCTTGCTTaGCCAAAGGTGTCCCTGGATAGTGAAGGCGTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TATLLGRGGLLA*PKVSLDSEGVY Trigger: GTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| 3UTR CAA 72 bp | CAAGGTGGGCACTATTTGGGGGTACCGCCACCCTTCTaGGGCGTGGTGGGCTTCTTGCTTTGCCAAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGGHYLGVPPPF*GVVGFLLCQRC Trigger: ACACCTTTGGCAAAGCAAGAAGCCCACCACGCCCAAGAAGGGTGGCGGTACCCCCAAATAGTGCCCACCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCACTGGCCAGGTCCTaGAGGGTAGTCACATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPPLARS*RVVTFG Trigger: TCCAAATGTGACTACCCTTCAGGACCTGGCCAGTGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGTGGGTGACGGAAGTTaGAGACAGGAGAACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPVGDGS*RQENCC Trigger: GCAGCAGTTCTCCTGTCTTCAACTTCCGTCACCCAC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGATTCTGGGGCTGGCTaGGCAGAATTCCGGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPDSGAG*AEFRDD Trigger: ATCATCCCGGAATTCTGCTCAGCCAGCCCCAGAATC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCGGAACTGGCAGCTTaGGTCCCGAAAGAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPPELAA*VPKENQ Trigger: CTGATTCTCTTTCGGGACTCAAGCTGCCAGTTCCGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGACGGTTCCAGGCTTTaGCAAGAGCCTCCATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPDGSRL*QEPPCE Trigger: CTCACATGGAGGCTCTTGGCAAAGCCTGGAACCGTC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGCTGGGTGAAAACTTaGGTAGGTGAGGGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGWVKT*VGEGGC Trigger: ACAGCCTCCCTCACCTACGCAAGTTTTCACCCAGCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGCACTGATGCTGGGGAGGATGCATTGCTTCCATTCTCCCAGTCACGTTGCCTCCTCCCGTTTCTaGTCCTTCTCTGCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TQALMLGRMHCFHSPSHVASSRF*SFSASC Trigger: GCAGGAGGCAGAGAAGGAGCAGAAACGGGAGGAGGC...AACGTGACTGGGAGAATGGAAGCAATGCATCCTCCCCAGCATCAGTGCCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAACTTCAGGGAGCCTGTaGATCCTCGGAGTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPTSGSL*ILGVET Trigger: AGTCTCCACTCCGAGGATCCACAGGCTCCCTGAAGT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATCCAGATTCTGGGGCTaGCTGAGCAGAATTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPSRFWG*LSRIPG Trigger: TCCCGGAATTCTGCTCAGCCAGCCCCAGAATCTGGA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAACCCTCGGATGGGGGTaGTGGTTTCAGTATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPTLGWG*WFQYLS Trigger: GGAGAGATACTGAAACCACCACCCCCATCCGAGGGT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGTTTCTGTGCCTCTATaGCTCGGCGCTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPVSVPL*LGASPP Trigger: TGGAGGAGAAGCGCCGAGCCATAGAGGCACAGAAAC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGAAGCCGCTGTTGCTaGTCTGTGAGCCTCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPRSRCC*SVSLCM Trigger: CATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATCACACCAAGGTTATTaGGAGCCTCGTTGGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPSHQGY*EPRWPP Trigger: CGGTGGCCAACGAGGCTCCCAATAACCTTGGTGTGA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAACTGGTCCAAAGACTTaGTCTCGGGGACCAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPTGPKT*SRGPGK Trigger: CTTTCCTGGTCCCCGAGATCAAGTCTTTGGACCAGT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGTGACAGAAGTGGGTaGCGGAAGTTGAAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGDRSG*RKLKTG Trigger: TCCTGTCTTCAACTTCCGTCACCCACTTCTGTCACC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCCAGCCTCTGCCTATaGTTGGCAAAGATTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPPSLCL*LAKIAS Trigger: TGAGGCAATCTTTGCCAAGCATAGGCAGAGGCTGGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATACCCTTGTCAAAGGTaGAAGCTTCAGCTCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPYPCQR*KLQLCR Trigger: CCGGCAGAGCTGAAGCTTGCACCTTTGACAAGGGTA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATTTCTGCTCCTTCTCTaGCTCCTGCCACTGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPFLLLL*LLPLFA Trigger: CGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGAAA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207152.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTGGGGAGGATGCATTaGTTCCATTCTCCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLGRMH*FHSPSH Trigger: GTGACTGGGAGAATGGAAGCAATGCATCCTCCCCAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGCTCCCATGAGAATTaGCTGGTGTTTCAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGSHEN*LVFQVS Trigger: GCTGACCTGAAACACCAGCCAATTCTCATGGGAGCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATCGATGACAGCTAGGTaGGCTCCCATGAGAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPSMTAR*APMRIG Trigger: GCCAATTCTCATGGGAGCCCACCTAGCTGTCATCGA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGACCTTGAGGGGTGGTaGGACATACAGCAAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPDLEGW*DIQQVF Trigger: GAAGACTTGCTGTATGTCCCACCACCCCTCAAGGTC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGTTGACCTTGAGGGGTaGTGGGACATACAGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPVDLEG*WDIQQV Trigger: GACTTGCTGTATGTCCCACCACCCCTCAAGGTCAAC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGGAGAGTGGTGGTTTaGAGAGACCCTCAGGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGRVVV*RDPQEN Trigger: ATTCTCCTGAGGGTCTCTCCAAACCACCACTCTCCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTCGGATGGGGGTGGTaGTTTCAGTATCTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLGWGW*FQYLSC Trigger: ACAGGAGAGATACTGAAACCACCACCCCCATCCGAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATCACTTCGGAGTTGTTaGCTGCTGGGGATGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPSLRSC*LLGMKP Trigger: TGGCTTCATCCCCAGCAGCCAACAACTCCGAAGTGA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGTACAGGCACCTGGCTaGGTGAAAACTTGCGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPVQAPG*VKTCVG Trigger: ACCTACGCAAGTTTTCACCCAGCCAGGTGCCTGTAC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTCCATGTGAGACATTaGTGGAGAGGACTTCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLHVRH*WRGLQG Trigger: TCCCTGAAGTCCTCTCCATCAATGTCTCACATGGAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGAAAACTTGCGTAGGTaGGGGAGGCTGTCTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPENLRR*GRLSTS Trigger: TGATGTAGACAGCCTCCCTCACCTACGCAAGTTTTC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACAGAAAAGGAGTTTGTaGTCCAAGCTGCTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPQKRSL*SKLLRA Trigger: GGCTCTGAGCAGCTTGGAGCACAAACTCCTTTTCTG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGAGGCACAGAAGTCTTaGACCAGCTGGAGGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPEAQKS*TSWRLY Trigger: ATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTCTTGCCCAGCCTCTaGCTATGCTTGGCAAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLLPSL*LCLAKI Trigger: AATCTTTGCCAAGCATAGGCAGAGGCTGGGCAAGAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGTGGGCTTCTTGCTTTaGCAAAGGTGTCCCTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPVGFLL*QRCPWI Trigger: TATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCAC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAAGGGTAGTCACATTTaGAAAGCAGGGAGCCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPKGSHI*KAGSPS Trigger: CGAAGGGCTCCCTGCTTTCCAAATGTGACTACCCTT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGCCTCTGCCTATGCTTaGCAAAGATTGCCTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPASAYA*QRLPQC Trigger: GCATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATACGGGGTGTTGGGCTaGGGCCTGGCCCAGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSYGVLG*GLAQGC Trigger: GCAGCCCTGGGCCAGGCCCCAGCCCAACACCCCGTA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGGCTGTCTACATCATaGGGTGGTGTGAGTACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPRLSTS*GGVSTL Trigger: AAGGGTACTCACACCACCCCATGATGTAGACAGCCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACAGCAGGCCGCGGGCTaGGCTTCGTGCCAAGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSQQAAG*ASCQGR Trigger: TCGGCCTTGGCACGAAGCCCAGCCCGCGGCCTGCTG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGTTTTAGCAGGGATCTaGGTGAACCGTTTGCGATCC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPVLAGI*VNRLRS Trigger: GGATCGCAAACGGTTCACCCAGATCCCTGCTAAAAC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTTTGTCCACTCAAATaGGAAGGCAACCATGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPLCPLK*EGNHES Trigger: GCTCTCATGGTTGCCTTCTCATTTGAGTGGACAAAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACTCGAGCTGTGGCAGTaGCTGGCGCCAGGCCCGACA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSLELWQ*LAPGPT Trigger: TGTCGGGCCTGGCGCCAGGCACTGCCACAGCTCGAG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATGGGTGCTCAGGCAGTaGAGGCACCGTGCCCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSWVLRQ*RHRAPP Trigger: AGGAGGGGCACGGTGCCTTCACTGCCTGAGCACCCA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGCCTCGCGCACTGGGTaGTCAGGCAGTGAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSASRTG*SGSEGT Trigger: GGTGCCTTCACTGCCTGAGCACCCAGTGCGCGAGGC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACCCATCCAGAGGGGCTaGAGGAGATGCACGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSPIQRG*RRCTLG Trigger: GCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGATGGTGGCAGCCAGTaGTGCCCCACTGGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSDGGSQ*CPTGQV Trigger: GACCTGGCCAGTGGGGCAGCACTGGCTGCCACCATC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACAAAGATTGCCTCAATaGGTCGTTTCTGTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPQRLPQ*VVSVPL Trigger: TAGAGGCACAGAAACGACGCATTGAGGCAATCTTTG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGCAGCCTCCCGAGGCTaGACCTGCAGGAAAGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSAASRG*TCRKAL Trigger: GAGCGCTTTCCTGCAGGTGCAGCCTCGGGAGGCTGC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGAAGTGGTTGGCCTTaGTTTTCTCGATTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPGSGWP*FSRFPL Trigger: TAGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACGAGAGAAATCGTACTaGTCCAAAGACTTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPREKSY*SKDLIS Trigger: CGAGATCAAGTCTTTGGACCAGTACGATTTCTCTCG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGCGTTCAGCAAAACTaGTCATCTTCACTTCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPCVQQN*SSSLRS Trigger: ACTCCGAAGTGAAGATGACCAGTTTTGCTGAACGCA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGAATTCTGTTCTTCTaGGGCTCATTCACCTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPRILFF*GSFTLP Trigger: AGGCAAGGTGAATGAGCCCCAGAAGAACAGAATTCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAAGAGAATCAGGAAGTaGTTGGCCTTGCTTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPKRIRK*LALLFS Trigger: CGAGAAAAGCAAGGCCAACCACTTCCTGATTCTCTT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAGGAATGACCCAGGCTaGAGGTGGTGGGGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSRNDPG*RWWGRS Trigger: GGACCTGCCCCACCACCTGCAGCCTGGGTCATTCCT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTTGCTTTGCCAAAGGTGTCCCTGGATAGTGAAGGCGTCTACACTCATATTTCTGCTCCTTCTCTaGCTCCTGCCACTGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GFLLCQRCPWIVKASTLIFLLLL*LLPLFA Trigger: CGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGAAA...TATGAGTGTAGACGCCTTCACTATCCAGGGACACCTTTGGCAAAGCAAGAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAACTGTTGTTCTGAGATaGAACAGTCTCTGTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPTVVLR*NSLCIP Trigger: CGGAATACAGAGACTGTTCCATCTCAGAACAACAGT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATCCCTCTGGGGGCACTaGGCCCAGGTCTGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSSLWGH*AQVWRE Trigger: TTCTCTCCAGACCTGGGCCCAGTGCCCCCAGAGGGA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGAATCAGGAAGTGGTTaGCCTTGCTTTTCTCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPESGSG*PCFSRF Trigger: AAATCGAGAAAAGCAAGGCCAACCACTTCCTGATTC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACTGGGGACCACCAGGTaGCAGAAGTGGGTGACGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSLGTTR*QKWVTE Trigger: TTCCGTCACCCACTTCTGTCACCTGGTGGTCCCCAG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGGCCAAAGGGAGTGCTaGACGACACAGCCTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSGQREC*TTQPGR Trigger: TCTCCCAGGCTGTGTCGTTCAGCACTCCCTTTGGCC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATTCCCCACCAGGAACTaGGCCCAGCTCAGCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSFPTRN*AQLSFL Trigger: GAGGAAGCTGAGCTGGGCTCAGTTCCTGGTGGGGAA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATGGAGACATGAGGCCTaGTGGAGAAGGGGCCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSWRHEA*WRRGPR Trigger: TCTCGGGCCCCTTCTCCATCAGGCCTCATGTCTCCA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAGGGGCTGCAGGAGATaGACGCTGGGCTGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSRGCRR*TLGCFL Trigger: CAAGAAGCAGCCCAGCGTGCATCTCCTGCAGCCCCT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACTCTGCATGTCCCGCTaGAGAGAGCTCAGAGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSLCMSR*RELRAA Trigger: TGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAGTCACGTTCTCGACTaGCAGGCAGGCGGCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSSHVLD*QAGGLE Trigger: CTCCAAGCCGCCTGCCTGGCAGTCGAGAACGTGACT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAACAGAGCAGAGGGACTaGGGGATGGCTCGAGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSTEQRD*GMARAV Trigger: CACAGCTCGAGCCATCCCCCAGTCCCTCTGCTCTGT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACCTCGGAGTGGAGACTaGGGACCACCAGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSPRSGD*GPPGDR Trigger: TCTGTCACCTGGTGGTCCCCAGTCTCCACTCCGAGG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACACCTCCTCCTCAGCTaGGGCCATGGCTCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSHLLLS*GHGSGS Trigger: ACTACCAGAGCCATGGCCCCAGCTGAGGAGGAGGTG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAAGGGGCCCGAGAGGTaGGCCTCTTCACACCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSKGPER*ASSHQG Trigger: ACCTTGGTGTGAAGAGGCCCACCTCTCGGGCCCCTT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| 3UTR CAA 72 bp | TGGATGATAAACTTGTTAGACTTGGCGCTGGGTTCCTaGTATAGCCGGGGACCTGTGTACTCAGGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WMINLLDLALGS*YSRGPVYSGTD Trigger: ATCAGTGCCTGAGTACACAGGTCCCCGGCTATACAAGGAACCCAGCGCCAAGTCTAACAAGTTTATCATCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| 3UTR CAA 72 bp | TGTGACAAGGCATTGTGGATGATAAACTTGTTAGACTaGGCGCTGGGTTCCTTGTATAGCCGGGGACCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CDKALWMINLLD*ALGSLYSRGPV Trigger: CACAGGTCCCCGGCTATACAAGGAACCCAGCGCCAAGTCTAACAAGTTTATCATCCACAATGCCTTGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| 3UTR CAA 72 bp | AGGCAGCAGTGTGACAAGGCATTGTGGATGATAAACTaGTTAGACTTGGCGCTGGGTTCCTTGTATAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RQQCDKALWMIN*LDLALGSLYSR Trigger: CCGGCTATACAAGGAACCCAGCGCCAAGTCTAACAAGTTTATCATCCACAATGCCTTGTCACACTGCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACAGACATGGGGTCCTTaGGGCACACCTCCTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSQTWGP*GTPPQV Trigger: GACTTGAGGAGGTGTGCCTCAAGGACCCCATGTCTG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAATCAGACAGCGGCTTTaGGGCTCCTTCGGGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSIRQRL*GSFGRV Trigger: TACCCTCCCGAAGGAGCCTCAAAGCCGCTGTCTGAT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATGGAGACCCCAATCCTaGCTCAGCCTCAGCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSWRPQS*LSLSLH Trigger: GTGAAGGCTGAGGCTGAGTCAGGATTGGGGTCTCCA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATGGTCTGTGAGCCTCTaGATGTCCCGCTGCAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSWSVSL*MSRCRE Trigger: CTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGACTCGCCGCCGCCTTaGCTCGAGAGAAATCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSDSPPP*LERNRT Trigger: AGTACGATTTCTCTCGAGCCAAGGCGGCGGCGAGTC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGACAATAGCAGTGGATaGTGGCAGCCAGTGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSDNSSG*WQPVLP Trigger: GGGCAGCACTGGCTGCCACCATCCACTGCTATTGTC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAGGGTAGGGGGAGAGTaGTGGTTTGGAGAGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSRVGGE*WFGETL Trigger: GAGGGTCTCTCCAAACCACCACTCTCCCCCTACCCT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGGGGGAACCCTCGGATaGGGGTGGTGGTTTCAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSGGTLG*GWWFQY Trigger: ATACTGAAACCACCACCCCCATCCGAGGGTTCCCCC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATGTAAAGGCCAAGCCTaGAGCCTCCTGAGCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSCKGQA*SLLSQP Trigger: AGGCTGGCTCAGGAGGCTCCAGGCTTGGCCTTTACA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGTGACAAGGCATTGTaGATGATAAACTTGTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KWRTDKGTELSPESLKLPCDKAL*MINLLD Trigger: GTCTAACAAGTTTATCATCCACAATGCCTTGTCACA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGTGGGTGACGGAAGTTaGAGACAGGAGAACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSVGDGS*RQENCC Trigger: GCAGCAGTTCTCCTGTCTTCAACTTCCGTCACCCAC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGTTTGTGCTCCAAGCTaGTCAGAGCCAAGGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSVCAPS*SEPRDQ Trigger: CTGGTCCCTTGGCTCTGAGCAGCTTGGAGCACAAAC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGACGGTTCCAGGCTTTaGCAAGAGCCTCCATGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSDGSRL*QEPPCE Trigger: CTCACATGGAGGCTCTTGGCAAAGCCTGGAACCGTC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGGCTGGGTGAAAACTTaGGTAGGTGAGGGAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSGWVKT*VGEGGC Trigger: ACAGCCTCCCTCACCTACGCAAGTTTTCACCCAGCC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAACTTCAGGGAGCCTGTaGATCCTCGGAGTGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSTSGSL*ILGVET Trigger: AGTCTCCACTCCGAGGATCCACAGGCTCCCTGAAGT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATCCAGATTCTGGGGCTaGCTGAGCAGAATTCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSSRFWG*LSRIPG Trigger: TCCCGGAATTCTGCTCAGCCAGCCCCAGAATCTGGA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAACCCTCGGATGGGGGTaGTGGTTTCAGTATCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSTLGWG*WFQYLS Trigger: GGAGAGATACTGAAACCACCACCCCCATCCGAGGGT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGTTTCTGTGCCTCTATaGCTCGGCGCTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSVSVPL*LGASPP Trigger: TGGAGGAGAAGCGCCGAGCCATAGAGGCACAGAAAC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGGTGACAGAAGTGGGTaGCGGAAGTTGAAGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSGDRSG*RKLKTG Trigger: TCCTGTCTTCAACTTCCGTCACCCACTTCTGTCACC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATACCCTTGTCAAAGGTaGAAGCTTCAGCTCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSYPCQR*KLQLCR Trigger: CCGGCAGAGCTGAAGCTTGCACCTTTGACAAGGGTA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATTTCTGCTCCTTCTCTaGCTCCTGCCACTGTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSFLLLL*LLPLFA Trigger: CGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGAAA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACTGGGGAGGATGCATTaGTTCCATTCTCCCAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSLGRMH*FHSPSH Trigger: GTGACTGGGAGAATGGAAGCAATGCATCCTCCCCAG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGGCTCCCATGAGAATTaGCTGGTGTTTCAGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSGSHEN*LVFQVS Trigger: GCTGACCTGAAACACCAGCCAATTCTCATGGGAGCC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATCGATGACAGCTAGGTaGGCTCCCATGAGAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSSMTAR*APMRIG Trigger: GCCAATTCTCATGGGAGCCCACCTAGCTGTCATCGA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATCACTTCGGAGTTGTTaGCTGCTGGGGATGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSSLRSC*LLGMKP Trigger: TGGCTTCATCCCCAGCAGCCAACAACTCCGAAGTGA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGTACAGGCACCTGGCTaGGTGAAAACTTGCGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSVQAPG*VKTCVG Trigger: ACCTACGCAAGTTTTCACCCAGCCAGGTGCCTGTAC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR TCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGAAAACTTGCGTAGGTaGGGGAGGCTGTCTACATCA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSENLRR*GRLSTS Trigger: TGATGTAGACAGCCTCCCTCACCTACGCAAGTTTTC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACAGAAAAGGAGTTTGTaGTCCAAGCTGCTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSQKRSL*SKLLRA Trigger: GGCTCTGAGCAGCTTGGAGCACAAACTCCTTTTCTG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGAGGCACAGAAGTCTTaGACCAGCTGGAGGTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSEAQKS*TSWRLY Trigger: ATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGCCTCTGCCTATGCTTaGCAAAGATTGCCTCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSASAYA*QRLPQC Trigger: GCATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACAAAGATTGCCTCAATaGGTCGTTTCTGTGCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSQRLPQ*VVSVPL Trigger: TAGAGGCACAGAAACGACGCATTGAGGCAATCTTTG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR GCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGGAAGTGGTTGGCCTTaGTTTTCTCGATTTCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSGSGWP*FSRFPL Trigger: TAGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACGAGAGAAATCGTACTaGTCCAAAGACTTGATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSREKSY*SKDLIS Trigger: CGAGATCAAGTCTTTGGACCAGTACGATTTCTCTCG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAAGAGAATCAGGAAGTaGTTGGCCTTGCTTTTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSKRIRK*LALLFS Trigger: CGAGAAAAGCAAGGCCAACCACTTCCTGATTCTCTT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAACTGTTGTTCTGAGATaGAACAGTCTCTGTATTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSTVVLR*NSLCIP Trigger: CGGAATACAGAGACTGTTCCATCTCAGAACAACAGT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGAATCAGGAAGTGGTTaGCCTTGCTTTTCTCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSESGSG*PCFSRF Trigger: AAATCGAGAAAAGCAAGGCCAACCACTTCCTGATTC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CCA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATGTGACAAGGCATTGTaGATGATAAACTTGTTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLREETPCLSFSFQLFYSCDKAL*MINLLD Trigger: GTCTAACAAGTTTATCATCCACAATGCCTTGTCACA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS GCA 90 bp | GCTGCGTCGGGCAGCTGGGGCACGACGGGCAGGGCTGGGGGATGCTaGTTTAGGCCCAGTGGCGGGTCCAGGAATGACCCAGGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AASGSWGTTGRAGGC*FRPSGGSRNDPGCR Trigger: CCTGCAGCCTGGGTCATTCCTGGACCCGCCACTGGGCCTAAAGCAGCATCCCCCAGCCCTGCCCGTCGTGCCCCAGCTGCCCGACGCAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS GCA 90 bp | AGGGCTGCGTCGGGCAGCTGGGGCACGACGGGCAGGGCTGGGGGATaGTGCTTTAGGCCCAGTGGCGGGTCCAGGAATGACCCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RAASGSWGTTGRAGG*CFRPSGGSRNDPGC Trigger: GCAGCCTGGGTCATTCCTGGACCCGCCACTGGGCCTAAAGCAGCATCCCCCAGCCCTGCCCGTCGTGCCCCAGCTGCCCGACGCAGCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CCA 90 bp | GCACCGTGCCCCTCCTCGCCAGCAAGGCCAACAGAGCAGAGGGACTaGGGGATGGCTCGAGCTGTGGCAGTGCCTGGCGCCAGGCCCGAC | + |
|
Preference number: 5 (lower is better) Translates to: APCPSSPARPTEQRD*GMARAVAVPGARPD Trigger: GTCGGGCCTGGCGCCAGGCACTGCCACAGCTCGAGCCATCCCCCAGTCCCTCTGCTCTGTTGGCCTTGCTGGCGAGGAGGGGCACGGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 90 bp | CTGATCGGTGTAGAAGGGTTCCCACAGCTCCGGAGGCACATGCTCTaGTCCCCCGAATGCGGCCCGCAGCACCCACGCCAGACTCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LIGVEGFPQLRRHML*SPECGPQHPRQTRR Trigger: GCGGCGAGTCTGGCGTGGGTGCTGCGGGCCGCATTCGGGGGAGCAGAGCATGTGCCTCCGGAGCTGTGGGAACCCTTCTACACCGATCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 90 bp | CTCCTGAGCCAGCCTGGCGGCCTCCTCCCGTTTCTGCTCCTTCTCTaGCTCCTGCCACTGTTTGCGCCGCCGGGCTTCCTCTACCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLSQPGGLLPFLLLL*LLPLFAPPGFLYPP Trigger: AGGCGGGTAGAGGAAGCCCGGCGGCGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGAAACGGGAGGAGGCCGCCAGGCTGGCTCAGGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CCA 90 bp | AACAGAGCAGAGGGACTGGGGGATGGCTCGAGCTGTGGCAGTGCCTaGCGCCAGGCCCGACAGTATAGTTCCGCAGAGAGCAGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: NRAEGLGDGSSCGSA*RQARQYSSAESSSR Trigger: GCGGCTGCTGCTCTCTGCGGAACTATACTGTCGGGCCTGGCGCCAGGCACTGCCACAGCTCGAGCCATCCCCCAGTCCCTCTGCTCTGTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CCA 90 bp | GCCCTTCGGGCAATGGCACGGTCCTTGCGATATCGAATCGAGGGCTaGGCAGGAGAGGCCCCATCCAGAGGGGCTGCAGGAGATGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: ALRAMARSLRYRIEG*AGEAPSRGAAGDAR Trigger: GCGTGCATCTCCTGCAGCCCCTCTGGATGGGGCCTCTCCTGCCCAGCCCTCGATTCGATATCGCAAGGACCGTGCCATTGCCCGAAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207712.2 |
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| CDS GCA 90 bp | CGCAGAGAGCAGCAGCCGCGTCACTGGGGGCTTCACGTGCTCCTGTaGGTACTGATCGGTGTAGAAGGGTTCCCACAGCTCCGGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RREQQPRHWGLHVLL*VLIGVEGFPQLRRH Trigger: GTGCCTCCGGAGCTGTGGGAACCCTTCTACACCGATCAGTACGCACAGGAGCACGTGAAGCCCCCAGTGACGCGGCTGCTGCTCTCTGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS CCA 90 bp | GGGGCAGGTCCAGGAGCTTCTGGAGGGGCTAGAAGCCGCTGTTGCTaGTCTGTGAGCCTCTGCATGTCCCGCTGCAGAGAGCTCAGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GAGPGASGGARSRCC*SVSLCMSRCRELRA Trigger: CGCTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGCCCCTCCAGAAGCTCCTGGACCTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS GCA 90 bp | GGTGGGGCAGGTCCAGGAGCTTCTGGAGGGGCTAGAAGCCGCTGTTaGTGGTCTGTGAGCCTCTGCATGTCCCGCTGCAGAGAGCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GGAGPGASGGARSRC*WSVSLCMSRCRELR Trigger: TCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGCCCCTCCAGAAGCTCCTGGACCTGCCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CCA 90 bp | CACTGGAGCCGCAGAGGCTACAACAGGAGTTGTAAAGGCCAAGCCTaGAGCCTCCTGAGCCAGCCTGGCGGCCTCCTCCCGTTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HWSRRGYNRSCKGQA*SLLSQPGGLLPFLL Trigger: GAGCAGAAACGGGAGGAGGCCGCCAGGCTGGCTCAGGAGGCTCCAGGCTTGGCCTTTACAACTCCTGTTGTAGCCTCTGCGGCTCCAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS TCA 90 bp | GTCCAGGAGCTTCTGGAGGGGCTAGAAGCCGCTGTTGCTGGTCTGTaGGCCTCTGCATGTCCCGCTGCAGAGAGCTCAGAGCGGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: VQELLEGLEAAVAGL*ASACPAAESSERHS Trigger: TGAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGCCCCTCCAGAAGCTCCTGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS TCA 90 bp | GCAGAGGCTACAACAGGAGTTGTAAAGGCCAAGCCTGGAGCCTCCTaGGCCAGCCTGGCGGCCTCCTCCCGTTTCTGCTCCTTCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AEATTGVVKAKPGAS*ASLAASSRFCSFSA Trigger: GGCAGAGAAGGAGCAGAAACGGGAGGAGGCCGCCAGGCTGGCTCAGGAGGCTCCAGGCTTGGCCTTTACAACTCCTGTTGTAGCCTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATTGGACTACGGGGTGTaGGGCTGGGGCCTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPLDYGV*GWGLAQ Trigger: CTGGGCCAGGCCCCAGCCCAACACCCCGTAGTCCAA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS GCA 90 bp | AGGAGAGGCCCCATCCAGAGGGGCTGCAGGAGATGCACGCTGGGCTaGTTCTTGTTCTGTCTTCTCCTGCAGCCGCCGAACAGTTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RRGPIQRGCRRCTLG*FLFCLLLQPPNSCV Trigger: GACACAACTGTTCGGCGGCTGCAGGAGAAGACAGAACAAGAAGCAGCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGGGCCTCTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 90 bp | GCTTCTGGAGGGGCTAGAAGCCGCTGTTGCTGGTCTGTGAGCCTCTaGATGTCCCGCTGCAGAGAGCTCAGAGCGGCACTCAGCTTACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASGGARSRCCWSVSL*MSRCRELRAALSLL Trigger: CAGTAAGCTGAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGCCCCTCCAGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS TCA 90 bp | CAGGGAGCCTGTGGATCCTCGGAGTGGAGACTGGGGACCACCAGGTaGCAGAAGTGGGTGACGGAAGTTGAAGACAGGAGAACTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGACGSSEWRLGTTR*QKWVTEVEDRRTAA Trigger: GGCAGCAGTTCTCCTGTCTTCAACTTCCGTCACCCACTTCTGTCACCTGGTGGTCCCCAGTCTCCACTCCGAGGATCCACAGGCTCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 90 bp | ATATCGAATCGAGGGCTGGGCAGGAGAGGCCCCATCCAGAGGGGCTaGAGGAGATGCACGCTGGGCTGCTTCTTGTTCTGTCTTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISNRGLGRRGPIQRG*RRCTLGCFLFCLLL Trigger: CAGGAGAAGACAGAACAAGAAGCAGCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGGGCCTCTCCTGCCCAGCCCTCGATTCGATAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207712.2 |
||
| CDS GCA 90 bp | GCCTCCCGAGGCTGCACCTGCAGGAAAGCGCTCTTGCCCAGCCTCTaGCTATGCTTGGCAAAGATTGCCTCAATGCGTCGTTTCTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ASRGCTCRKALLPSL*LCLAKIASMRRFCA Trigger: GGCACAGAAACGACGCATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGCTGGGCAAGAGCGCTTTCCTGCAGGTGCAGCCTCGGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS GCA 90 bp | CATGTCCCGCTGCAGAGAGCTCAGAGCGGCACTCAGCTTACTGACTaGTCTATTGTAATCCCCAAGTCCCTCTGGGGGCACTGGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HVPLQRAQSGTQLTD*SIVIPKSLWGHWAQ Trigger: CTGGGCCCAGTGCCCCCAGAGGGACTTGGGGATTACAATAGAGCAGTCAGTAAGCTGAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CCA 90 bp | ACCCACGCCAGACTCGCCGCCGCCTTGGCTCGAGAGAAATCGTACTaGTCCAAAGACTTGATCTCGGGGACCAGGAAAGTCCTCCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: THARLAAALAREKSY*SKDLISGTRKVLRS Trigger: ACTGCGGAGGACTTTCCTGGTCCCCGAGATCAAGTCTTTGGACCAGTACGATTTCTCTCGAGCCAAGGCGGCGGCGAGTCTGGCGTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS CCA 90 bp | AGCCAGTGCTGCCCCACTGGCCAGGTCCTGAAGGGTAGTCACATTTaGAAAGCAGGGAGCCCTTCGGGCAATGGCACGGTCCTTGCGATA | + |
|
Preference number: 5 (lower is better) Translates to: SQCCPTGQVLKGSHI*KAGSPSGNGTVLAI Trigger: TATCGCAAGGACCGTGCCATTGCCCGAAGGGCTCCCTGCTTTCCAAATGTGACTACCCTTCAGGACCTGGCCAGTGGGGCAGCACTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS TCA 90 bp | CTGCCATCAGCAGCCCCATCAGGGAGCAGTCGGGGCTCAGCACTGTaGATGATCTGCAGGGCCTCTTCAATCGTGGGTAGGTCTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LPSAAPSGSSRGSAL*MICRASSIVGRSPD Trigger: ATCTGGAGACCTACCCACGATTGAAGAGGCCCTGCAGATCATTCACAGTGCTGAGCCCCGACTGCTCCCTGATGGGGCTGCTGATGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS TCA 90 bp | TCTGCATGTCCCGCTGCAGAGAGCTCAGAGCGGCACTCAGCTTACTaGCTGCTCTATTGTAATCCCCAAGTCCCTCTGGGGGCACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SACPAAESSERHSAY*LLYCNPQVPLGALG Trigger: GCCCAGTGCCCCCAGAGGGACTTGGGGATTACAATAGAGCAGTCAGTAAGCTGAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS GCA 90 bp | AGGGACAGGGGGCAGCCTCGAGGAAGATGGGAGGCACAGAAGTCTTaGACCAGCTGGAGGTTGTATAGACTGTCTGCCACAGACATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RDRGQPRGRWEAQKS*TSWRLYRLSATDMG Trigger: CCCCATGTCTGTGGCAGACAGTCTATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCATCTTCCTCGAGGCTGCCCCCTGTCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGACTCGCCGCCGCCTaGGCTCGAGAGAAATCGTAC | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPRLAAA*AREKSY Trigger: GTACGATTTCTCTCGAGCCAAGGCGGCGGCGAGTCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAACAGCACCACCAGGTaGACCTTGAGGGGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPNSTTR*TLRGGG Trigger: CCCACCACCCCTCAAGGTCAACCTGGTGGTGCTGTT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATTGGCGCTGGGTTCCTaGTATAGCCGGGGACCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPLALGS*YSRGPV Trigger: CACAGGTCCCCGGCTATACAAGGAACCCAGCGCCAA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATGGGGCTCATTCACCTaGCCTGCCAGGCAGCAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPWGSFT*PARQQC Trigger: ACACTGCTGCCTGGCAGGCAAGGTGAATGAGCCCCA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS GCA 90 bp | GCTAGAAGCCGCTGTTGCTGGTCTGTGAGCCTCTGCATGTCCCGCTaGAGAGAGCTCAGAGCGGCACTCAGCTTACTGACTGCTCTATTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSRCCWSVSLCMSR*RELRAALSLLTALL Trigger: CAATAGAGCAGTCAGTAAGCTGAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CCA 90 bp | ATACATCTCAGCCAACAGCACCACCAGGTTGACCTTGAGGGGTGGTaGGACATACAGCAAGTCTTCAAGGGACAGGGGGCAGCCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: IHLSQQHHQVDLEGW*DIQQVFKGQGAASR Trigger: CCTCGAGGCTGCCCCCTGTCCCTTGAAGACTTGCTGTATGTCCCACCACCCCTCAAGGTCAACCTGGTGGTGCTGTTGGCTGAGATGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAACCACCAGGTTGACCTaGAGGGGTGGTGGGACATAC | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPTTRLT*RGGGTY Trigger: GTATGTCCCACCACCCCTCAAGGTCAACCTGGTGGT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGGGAGAGTGGTGGTTaGGAGAGACCCTCAGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPGESGG*ERPSGE Trigger: TTCTCCTGAGGGTCTCTCCAAACCACCACTCTCCCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACTACGGGGGTGGATGTaGGAGACCCCAATCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPLRGWM*ETPILT Trigger: AGTCAGGATTGGGGTCTCCAACATCCACCCCCGTAG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATCAGCTCTGCCGGCCTaGCATGTTTTGGACTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPSALPA*HVLDYG Trigger: CCCGTAGTCCAAAACATGCAAGGCCGGCAGAGCTGA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS TCA 90 bp | CAAGGCCTCAGGTGCTACGGGGGTGGATGTTGGAGACCCCAATCCTaGCTCAGCCTCAGCCTTCACCAGCTGTTTCTTGCGTTCAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGLRCYGGGCWRPQS*LSLSLHQLFLAFSK Trigger: TTTGCTGAACGCAAGAAACAGCTGGTGAAGGCTGAGGCTGAGTCAGGATTGGGGTCTCCAACATCCACCCCCGTAGCACCTGAGGCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS GCA 90 bp | CGAGGCTGCACCTGCAGGAAAGCGCTCTTGCCCAGCCTCTGCCTATaGTTGGCAAAGATTGCCTCAATGCGTCGTTTCTGTGCCTCTATG | + |
|
Preference number: 5 (lower is better) Translates to: RGCTCRKALLPSLCL*LAKIASMRRFCASM Trigger: CATAGAGGCACAGAAACGACGCATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGCTGGGCAAGAGCGCTTTCCTGCAGGTGCAGCCTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CCA 90 bp | CATATACATCTCAGCCAACAGCACCACCAGGTTGACCTTGAGGGGTaGTGGGACATACAGCAAGTCTTCAAGGGACAGGGGGCAGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HIHLSQQHHQVDLEG*WDIQQVFKGQGAAS Trigger: CGAGGCTGCCCCCTGTCCCTTGAAGACTTGCTGTATGTCCCACCACCCCTCAAGGTCAACCTGGTGGTGCTGTTGGCTGAGATGTATATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAACAGACATGGGGTCCTaGAGGCACACCTCCTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPTDMGS*RHTSSS Trigger: ACTTGAGGAGGTGTGCCTCAAGGACCCCATGTCTGT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGAGGCACAGAAGTCTaGCACCAGCTGGAGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPGGTEV*HQLEVV Trigger: TACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATTCACTTCGGAGTTGTaGGCTGCTGGGGATGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPFTSEL*AAGDEA Trigger: GGCTTCATCCCCAGCAGCCAACAACTCCGAAGTGAA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATTCACACCAAGGTTATaGGGAGCCTCGTTGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPFTPRL*GASLAT Trigger: GGTGGCCAACGAGGCTCCCAATAACCTTGGTGTGAA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCCGGAACTGGCAGCTaGAGTCCCGAAAGAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPPGTGS*SPERES Trigger: TGATTCTCTTTCGGGACTCAAGCTGCCAGTTCCGGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAGGTGGGCTTCTTGCTTaGCCAAAGGTGTCCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPGGLLA*PKVSLD Trigger: ATCCAGGGACACCTTTGGCAAAGCAAGAAGCCCACC...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS TCA 90 bp | AAGCTGACGGTTCCAGGCTTTGCCAAGAGCCTCCATGTGAGACATTaGTGGAGAGGACTTCAGGGAGCCTGTGGATCCTCGGAGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KLTVPGFAKSLHVRH*WRGLQGACGSSEWR Trigger: TCTCCACTCCGAGGATCCACAGGCTCCCTGAAGTCCTCTCCATCAATGTCTCACATGGAGGCTCTTGGCAAAGCCTGGAACCGTCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 90 bp | GAGGCTGTCTACATCATGGGGTGGTGTGAGTACCCTTGTCAAAGGTaGAAGCTTCAGCTCTGCCGGCCTTGCATGTTTTGGACTACGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EAVYIMGWCEYPCQR*KLQLCRPCMFWTTG Trigger: CCCCGTAGTCCAAAACATGCAAGGCCGGCAGAGCTGAAGCTTGCACCTTTGACAAGGGTACTCACACCACCCCATGATGTAGACAGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCACCTCCATGTGAGACATaGATGGAGAGGACTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPPPCET*MERTSG Trigger: CCCTGAAGTCCTCTCCATCAATGTCTCACATGGAGG...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
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| CDS TCA 90 bp | AAAACTTGCGTAGGTGAGGGAGGCTGTCTACATCATGGGGTGGTGTaGGTACCCTTGTCAAAGGTGCAAGCTTCAGCTCTGCCGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KTCVGEGGCLHHGVV*VPLSKVQASALPAL Trigger: CAAGGCCGGCAGAGCTGAAGCTTGCACCTTTGACAAGGGTACTCACACCACCCCATGATGTAGACAGCCTCCCTCACCTACGCAAGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS GCA 90 bp | TCCTGCAGCCGCCGAACAGTTGTGTCTACCCAGAAAAGGAGTTTGTaGTCCAAGCTGCTCAGAGCCAAGGGACCAGGTAGTGTCTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SCSRRTVVSTQKRSL*SKLLRAKGPGSVFV Trigger: GACAAAGACACTACCTGGTCCCTTGGCTCTGAGCAGCTTGGAGCACAAACTCCTTTTCTGGGTAGACACAACTGTTCGGCGGCTGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208036.2 ENSMUST00000208240.2 |
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| CDS CCA 90 bp | ACATACAGCAAGTCTTCAAGGGACAGGGGGCAGCCTCGAGGAAGATaGGAGGCACAGAAGTCTTGCACCAGCTGGAGGTTGTATAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: TYSKSSRDRGQPRGR*EAQKSCTSWRLYRL Trigger: CAGTCTATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCATCTTCCTCGAGGCTGCCCCCTGTCCCTTGAAGACTTGCTGTATGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGCAGGGAGATGATTTaGAAGGGTTCTCAGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPSREMI*KGSQGV Trigger: CACACCCTGAGAACCCTTCAAAATCATCTCCCTGCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAATCTTCACTTCGGAGTaGTTGGCTGCTGGGGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPIFTSE*LAAGDE Trigger: TTCATCCCCAGCAGCCAACAACTCCGAAGTGAAGAT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGCCTCTGCCTATGCTaGGCAAAGATTGCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPSLCLC*AKIASM Trigger: CATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATTCACCAGCTGTTTCTaGCGTTCAGCAAAACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPFTSCF*RSAKLV Trigger: GACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATTGGACTACGGGGTGTaGGGCTGGGGCCTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSLDYGV*GWGLAQ Trigger: CTGGGCCAGGCCCCAGCCCAACACCCCGTAGTCCAA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGGAAGTGGTTGGCCTaGCTTTTCTCGATTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPRKWLA*LFSISS Trigger: AGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAATCTGGGTGAACCGTTaGCGATCCGAGTTGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPIWVNR*RSELYL Trigger: TAAGTACAACTCGGATCGCAAACGGTTCACCCAGAT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS GCA 90 bp | GAGACCCCAATCCTGACTCAGCCTCAGCCTTCACCAGCTGTTTCTTaGGTTCAGCAAAACTGGTCATCTTCACTTCGGAGTTGTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ETPILTQPQPSPAVS*VQQNWSSSLRSCWL Trigger: CAGCCAACAACTCCGAAGTGAAGATGACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAAGGCTGAGGCTGAGTCAGGATTGGGGTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CCA 90 bp | ACTCAGCCTCAGCCTTCACCAGCTGTTTCTTGCGTTCAGCAAAACTaGTCATCTTCACTTCGGAGTTGTTGGCTGCTGGGGATGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQPQPSPAVSCVQQN*SSSLRSCWLLGMKP Trigger: TGGCTTCATCCCCAGCAGCCAACAACTCCGAAGTGAAGATGACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAAGGCTGAGGCTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATCAGTATCTCTCCTGTaGAGCAGGGAGATGATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPSVSLL*SREMIL Trigger: CAAAATCATCTCCCTGCTCAACAGGAGAGATACTGA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCATTGTGGATGATAAACTaGTTAGACTTGGCGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPLWMIN*LDLALG Trigger: ACCCAGCGCCAAGTCTAACAAGTTTATCATCCACAA...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAAGAATCAGGAAGTGGTaGGCCTTGCTTTTCTCGATT | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPRIRKW*ALLFSI Trigger: AATCGAGAAAAGCAAGGCCAACCACTTCCTGATTCT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS GCA 90 bp | GCCGAACAGTTGTGTCTACCCAGAAAAGGAGTTTGTGCTCCAAGCTaGTCAGAGCCAAGGGACCAGGTAGTGTCTTTGTCCACTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: AEQLCLPRKGVCAPS*SEPRDQVVSLSTQM Trigger: CATTTGAGTGGACAAAGACACTACCTGGTCCCTTGGCTCTGAGCAGCTTGGAGCACAAACTCCTTTTCTGGGTAGACACAACTGTTCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208036.2 ENSMUST00000208240.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGGAGGACAGACAAGGGGACTGAGCTGAGCCCTGAGTCACTGAAGCTCCCAATAAACTTGTTAGACTaGGCGCTGGGTTCCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: KWRTDKGTELSPESLKLPINLLD*ALGSLY Trigger: ATACAAGGAACCCAGCGCCAAGTCTAACAAGTTTAT...TGGGAGCTTCAGTGACTCAGGGCTCAGCTCAGTCCCCTTGTCTGTCCTCCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAACAGCACCACCAGGTaGACCTTGAGGGGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSNSTTR*TLRGGG Trigger: CCCACCACCCCTCAAGGTCAACCTGGTGGTGCTGTT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATCAGCTCTGCCGGCCTaGCATGTTTTGGACTACGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSSALPA*HVLDYG Trigger: CCCGTAGTCCAAAACATGCAAGGCCGGCAGAGCTGA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAACAGACATGGGGTCCTaGAGGCACACCTCCTCAAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSTDMGS*RHTSSS Trigger: ACTTGAGGAGGTGTGCCTCAAGGACCCCATGTCTGT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAGGAGGCACAGAAGTCTaGCACCAGCTGGAGGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSGGTEV*HQLEVV Trigger: TACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCC...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCACCTCCATGTGAGACATaGATGGAGAGGACTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSPPCET*MERTSG Trigger: CCCTGAAGTCCTCTCCATCAATGTCTCACATGGAGG...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAGCAGGGAGATGATTTaGAAGGGTTCTCAGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSSREMI*KGSQGV Trigger: CACACCCTGAGAACCCTTCAAAATCATCTCCCTGCT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAGCCTCTGCCTATGCTaGGCAAAGATTGCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSSLCLC*AKIASM Trigger: CATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGCT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCATTCACCAGCTGTTTCTaGCGTTCAGCAAAACTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSFTSCF*RSAKLV Trigger: GACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAA...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAGGAAGTGGTTGGCCTaGCTTTTCTCGATTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSRKWLA*LFSISS Trigger: AGAGGAAATCGAGAAAAGCAAGGCCAACCACTTCCT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAATCTGGGTGAACCGTTaGCGATCCGAGTTGTACTTA | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSIWVNR*RSELYL Trigger: TAAGTACAACTCGGATCGCAAACGGTTCACCCAGAT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAAGAATCAGGAAGTGGTaGGCCTTGCTTTTCTCGATT | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSRIRKW*ALLFSI Trigger: AATCGAGAAAAGCAAGGCCAACCACTTCCTGATTCT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS-3UTR CAA 90 bp | AGGCTTAGGGAGGAGACACCGTGTCTCAGCTTCTCTTTTCAGTTATTTTATTCAATAAACTTGTTAGACTaGGCGCTGGGTTCCTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RLREETPCLSFSFQLFYSINLLD*ALGSLY Trigger: ATACAAGGAACCCAGCGCCAAGTCTAACAAGTTTAT...TGAATAAAATAACTGAAAAGAGAAGCTGAGACACGGTGTCTCCTCCCTAAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000057028.15 |
||
| CDS GCA 72 bp | CCACAGCTCCGGAGGCACATGCTCTGCTCCCCCGAATaGGGCCCGCAGCACCCACGCCAGACTCGCCGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PQLRRHMLCSPE*GPQHPRQTRRR Trigger: GCGGCGGCGAGTCTGGCGTGGGTGCTGCGGGCCGCATTCGGGGGAGCAGAGCATGTGCCTCCGGAGCTGTGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS CCA 72 bp | CGCCAGCAAGGCCAACAGAGCAGAGGGACTGGGGGATaGCTCGAGCTGTGGCAGTGCCTGGCGCCAGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RQQGQQSRGTGG*LELWQCLAPGP Trigger: CGGGCCTGGCGCCAGGCACTGCCACAGCTCGAGCCATCCCCCAGTCCCTCTGCTCTGTTGGCCTTGCTGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS CCA 72 bp | CCCTCCTCGCCAGCAAGGCCAACAGAGCAGAGGGACTaGGGGATGGCTCGAGCTGTGGCAGTGCCTGGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PSSPARPTEQRD*GMARAVAVPGA Trigger: GGCGCCAGGCACTGCCACAGCTCGAGCCATCCCCCAGTCCCTCTGCTCTGTTGGCCTTGCTGGCGAGGAGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 72 bp | GTAGAAGGGTTCCCACAGCTCCGGAGGCACATGCTCTaGTCCCCCGAATGCGGCCCGCAGCACCCACGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VEGFPQLRRHML*SPECGPQHPRQ Trigger: CTGGCGTGGGTGCTGCGGGCCGCATTCGGGGGAGCAGAGCATGTGCCTCCGGAGCTGTGGGAACCCTTCTAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 72 bp | CCTCGCGCACTGGGTGCTCAGGCAGTGAAGGCACCGTaGCCCTCCTCGCCAGCAAGGCCAACAGAGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PRALGAQAVKAP*PSSPARPTEQR Trigger: CCTCTGCTCTGTTGGCCTTGCTGGCGAGGAGGGGCACGGTGCCTTCACTGCCTGAGCACCCAGTGCGCGAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS TCA 72 bp | CAGCAGGCTCCCCCAGGCTGGCTAGAGGGATCTCAATaGGGGCAGGCTTGGTGGTGGGCTCCTCGGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QQAPPGWLEGSQ*GQAWWWAPREV Trigger: CACCTCCCGAGGAGCCCACCACCAAGCCTGCCCTCATTGAGATCCCTCTAGCCAGCCTGGGGGAGCCTGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 72 bp | GAACCTGGCGGCCTCCTCCCGTTTCTGCTCCTTCTCTaGCTCCTGCCACTGTTTGCGCCGCCGGGCTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EPGGLLPFLLLL*LLPLFAPPGFL Trigger: GAGGAAGCCCGGCGGCGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGAAACGGGAGGAGGCCGCCAGGTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
||
| CDS CAA 90 bp | GCAGGCTCCCCCAGGCTGGCTAGAGGGATCTCAATGAGGGCAGGCTaGGTGGTGGGCTCCTCGGGAGGTGTCCCCTCCGACAGGAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: AGSPRLARGISMRAG*VVGSSGGVPSDRRI Trigger: TATCCTCCTGTCGGAGGGGACACCTCCCGAGGAGCCCACCACCAAGCCTGCCCTCATTGAGATCCCTCTAGCCAGCCTGGGGGAGCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 72 bp | CGAGGGCTGGGCAGGAGAGGCCCCATCCAGAGGGGCTaGAGGAGATGCACGCTGGGCTGCTTCTTGTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGLGRRGPIQRG*RRCTLGCFLFC Trigger: ACAGAACAAGAAGCAGCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGGGCCTCTCCTGCCCAGCCCTCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 72 bp | CCCGTTTCTGCTCCTTCTCTGCCTCCTGCCACTGTTTaGGCCGCCGGGCTTCCTCTACCCGCCTCTGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PVSAPSLPPATV*AAGLPLPASAD Trigger: GTCAGCAGAGGCGGGTAGAGGAAGCCCGGCGGCGCAAACAGTGGCAGGAGGCAGAGAAGGAGCAGAAACGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 72 bp | GGGGCTAGAAGCCGCTGTTGCTGGTCTGTGAGCCTCTaGATGTCCCGCTGCAGAGAGCTCAGAGCGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: GARSRCCWSVSL*MSRCRELRAAL Trigger: GAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CCA 72 bp | GAGGCCCCATCCAGAGGGGCTGCAGGAGATGCACGCTaGGCTGCTTCTTGTTCTGTCTTCTCCTGCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: EAPSRGAAGDAR*AASCSVFSCSR Trigger: GCGGCTGCAGGAGAAGACAGAACAAGAAGCAGCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGGGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS CCA 72 bp | GCAATGGCACGGTCCTTGCGATATCGAATCGAGGGCTaGGCAGGAGAGGCCCCATCCAGAGGGGCTGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AMARSLRYRIEG*AGEAPSRGAAG Trigger: TCCTGCAGCCCCTCTGGATGGGGCCTCTCCTGCCCAGCCCTCGATTCGATATCGCAAGGACCGTGCCATTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207712.2 |
||
| CDS CAA 90 bp | CCCTTGTCAAAGGTGCAAGCTTCAGCTCTGCCGGCCTTGCATGTTTaGGACTACGGGGTGTTGGGCTGGGGCCTGGCCCAGGGCTGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: PLSKVQASALPALHV*DYGVLGWGLAQGCV Trigger: GACGCAGCCCTGGGCCAGGCCCCAGCCCAACACCCCGTAGTCCAAAACATGCAAGGCCGGCAGAGCTGAAGCTTGCACCTTTGACAAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS TCA 72 bp | ACAACAGGAGTTGTAAAGGCCAAGCCTGGAGCCTCCTaGGCCAGCCTGGCGGCCTCCTCCCGTTTCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TTGVVKAKPGAS*ASLAASSRFCS Trigger: GGAGCAGAAACGGGAGGAGGCCGCCAGGCTGGCTCAGGAGGCTCCAGGCTTGGCCTTTACAACTCCTGTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 72 bp | CAGCAGCCGCGTCACTGGGGGCTTCACGTGCTCCTGTaGGTACTGATCGGTGTAGAAGGGTTCCCACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QQPRHWGLHVLL*VLIGVEGFPQL Trigger: GAGCTGTGGGAACCCTTCTACACCGATCAGTACGCACAGGAGCACGTGAAGCCCCCAGTGACGCGGCTGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS GCA 72 bp | GGTCCAGGAGCTTCTGGAGGGGCTAGAAGCCGCTGTTaGTGGTCTGTGAGCCTCTGCATGTCCCGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GPGASGGARSRC*WSVSLCMSRCR Trigger: TCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGCCCCTCCAGAAGCTCCTGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CCA 72 bp | CCAGGAGCTTCTGGAGGGGCTAGAAGCCGCTGTTGCTaGTCTGTGAGCCTCTGCATGTCCCGCTGCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGASGGARSRCC*SVSLCMSRCRE Trigger: CTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGCCCCTCCAGAAGCTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CAA 72 bp | GCAGCCTCCCGAGGCTGCACCTGCAGGAAAGCGCTCTaGCCCAGCCTCTGCCTATGCTTGGCAAAGATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: AASRGCTCRKAL*PSLCLCLAKIA Trigger: GGCAATCTTTGCCAAGCATAGGCAGAGGCTGGGCAAGAGCGCTTTCCTGCAGGTGCAGCCTCGGGAGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CAA 72 bp | GGCACTGGGCCCAGGTCTGGAGAGAAGGTAACTGACTaGTGCCGTAAGGACGGCTCACCCTGGCCCTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GTGPRSGEKVTD*CRKDGSPWPSP Trigger: AGGTGAGGGCCAGGGTGAGCCGTCCTTACGGCACAAGTCAGTTACCTTCTCTCCAGACCTGGGCCCAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
||
| CDS CAA 72 bp | GGGGCCCGAGAGGTGGGCCTCTTCACACCAAGGTTATaGGGAGCCTCGTTGGCCACCGTAGATAGGGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: GAREVGLFTPRL*GASLATVDRDS Trigger: GCTGTCCCTATCTACGGTGGCCAACGAGGCTCCCAATAACCTTGGTGTGAAGAGGCCCACCTCTCGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS CAA 90 bp | GGCCCCATCCAGAGGGGCTGCAGGAGATGCACGCTGGGCTGCTTCTaGTTCTGTCTTCTCCTGCAGCCGCCGAACAGTTGTGTCTACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPIQRGCRRCTLGCF*FCLLLQPPNSCVYP Trigger: TGGGTAGACACAACTGTTCGGCGGCTGCAGGAGAAGACAGAACAAGAAGCAGCCCAGCGTGCATCTCCTGCAGCCCCTCTGGATGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
||
| CDS CAA 90 bp | GATGGAGAAGGGGCCCGAGAGGTGGGCCTCTTCACACCAAGGTTATaGGGAGCCTCGTTGGCCACCGTAGATAGGGACAGCGTGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: DGEGAREVGLFTPRL*GASLATVDRDSVDW Trigger: CCAGTCCACGCTGTCCCTATCTACGGTGGCCAACGAGGCTCCCAATAACCTTGGTGTGAAGAGGCCCACCTCTCGGGCCCCTTCTCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS TCA 72 bp | GCAGCCCCATCAGGGAGCAGTCGGGGCTCAGCACTGTaGATGATCTGCAGGGCCTCTTCAATCGTGGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAPSGSSRGSAL*MICRASSIVGR Trigger: CCTACCCACGATTGAAGAGGCCCTGCAGATCATTCACAGTGCTGAGCCCCGACTGCTCCCTGATGGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS TCA 72 bp | CTTCTGGAGGGGCTAGAAGCCGCTGTTGCTGGTCTGTaGGCCTCTGCATGTCCCGCTGCAGAGAGCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLEGLEAAVAGL*ASACPAAESSE Trigger: CTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCGGCTTCTAGCCCCTCCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS TCA 72 bp | GGACAGCGTGGACTGGGAATAGACCTTGCTGAGCCGTaGACCTGGCGGCCTCCTCCCGTTTCTGCTCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GQRGLGIDLAEP*TWRPPPVSAPS Trigger: AGAAGGAGCAGAAACGGGAGGAGGCCGCCAGGTTCACGGCTCAGCAAGGTCTATTCCCAGTCCACGCTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207152.2 |
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| CDS GCA 72 bp | CAGCCTCCCGAGGCTGCACCTGCAGGAAAGCGCTCTTaGCCAGCCTCTGCCTATGCTTGGCAAAGATTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: QPPEAAPAGKRS*PASAYAWQRLP Trigger: AGGCAATCTTTGCCAAGCATAGGCAGAGGCTGGGCAAGAGCGCTTTCCTGCAGGTGCAGCCTCGGGAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS GCA 72 bp | ACTGGGCCCAGGTCTGGAGAGAAGGTAACTGACTTGTaGCGTAAGGACGGCTCACCCTGGCCCTCACCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGPRSGEKVTDL*RKDGSPWPSPA Trigger: AGCAGGTGAGGGCCAGGGTGAGCCGTCCTTACGGCACAAGTCAGTTACCTTCTCTCCAGACCTGGGCCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CCA 72 bp | TGCCCCACTGGCCAGGTCCTGAAGGGTAGTCACATTTaGAAAGCAGGGAGCCCTTCGGGCAATGGCACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: CPTGQVLKGSHI*KAGSPSGNGTV Trigger: GACCGTGCCATTGCCCGAAGGGCTCCCTGCTTTCCAAATGTGACTACCCTTCAGGACCTGGCCAGTGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 72 bp | CGCTGTTGCTGGTCTGTGAGCCTCTGCATGTCCCGCTaGAGAGAGCTCAGAGCGGCACTCAGCTTACTGACT | + |
|
Preference number: 6 (lower is better) Translates to: RCCWSVSLCMSR*RELRAALSLLT Trigger: AGTCAGTAAGCTGAGTGCCGCTCTGAGCTCTCTGCAGCGGGACATGCAGAGGCTCACAGACCAGCAACAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CCA 72 bp | CCTCAAGTCGTAATAGCTGGGGACAATAGCAGTGGATaGTGGCAGCCAGTGCTGCCCCACTGGCCAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PQVVIAGDNSSG*WQPVLPHWPGP Trigger: AGGACCTGGCCAGTGGGGCAGCACTGGCTGCCACCATCCACTGCTATTGTCCCCAGCTATTACGACTTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 72 bp | CTGAGCTCAAGGCCTCAGGTGCTACGGGGGTGGATGTaGGAGACCCCAATCCTGACTCAGCCTCAGCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSSRPQVLRGWM*ETPILTQPQPS Trigger: TGAAGGCTGAGGCTGAGTCAGGATTGGGGTCTCCAACATCCACCCCCGTAGCACCTGAGGCCTTGAGCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS TCA 72 bp | AGGTGCTACGGGGGTGGATGTTGGAGACCCCAATCCTaGCTCAGCCTCAGCCTTCACCAGCTGTTTCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RCYGGGCWRPQS*LSLSLHQLFLA Trigger: CGCAAGAAACAGCTGGTGAAGGCTGAGGCTGAGTCAGGATTGGGGTCTCCAACATCCACCCCCGTAGCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CCA 72 bp | AAGTCTTCAAGGGACAGGGGGCAGCCTCGAGGAAGATaGGAGGCACAGAAGTCTTGCACCAGCTGGAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: KSSRDRGQPRGR*EAQKSCTSWRL Trigger: CAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCATCTTCCTCGAGGCTGCCCCCTGTCCCTTGAAGACTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CCA 72 bp | AGCCAACAGCACCACCAGGTTGACCTTGAGGGGTGGTaGGACATACAGCAAGTCTTCAAGGGACAGGGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SQQHHQVDLEGW*DIQQVFKGQGA Trigger: TGCCCCCTGTCCCTTGAAGACTTGCTGTATGTCCCACCACCCCTCAAGGTCAACCTGGTGGTGCTGTTGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 72 bp | GTGGGCCTCTTCACACCAAGGTTATTGGGAGCCTCGTaGGCCACCGTAGATAGGGACAGCGTGGACTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VGLFTPRLLGAS*ATVDRDSVDWE Trigger: TTCCCAGTCCACGCTGTCCCTATCTACGGTGGCCAACGAGGCTCCCAATAACCTTGGTGTGAAGAGGCCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 90 bp | CCTCGAGGAAGATGGGAGGCACAGAAGTCTTGCACCAGCTGGAGGTaGTATAGACTGTCTGCCACAGACATGGGGTCCTTGAGGCACACC | + |
|
Preference number: 6 (lower is better) Translates to: PRGRWEAQKSCTSWR*YRLSATDMGSLRHT Trigger: GGTGTGCCTCAAGGACCCCATGTCTGTGGCAGACAGTCTATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCATCTTCCTCGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 90 bp | GTCACATTTGGAAAGCAGGGAGCCCTTCGGGCAATGGCACGGTCCTaGCGATATCGAATAGGAACCAGCTTCCAGTACCAGCGTGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VTFGKQGALRAMARS*RYRIGTSFQYQRVG Trigger: CCCCACACGCTGGTACTGGAAGCTGGTTCCTATTCGATATCGCAAGGACCGTGCCATTGCCCGAAGGGCTCCCTGCTTTCCAAATGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS TCA 72 bp | AGTGGAGACTGGGGACCACCAGGTGACAGAAGTGGGTaGCGGAAGTTGAAGACAGGAGAACTGCTGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: SGDWGPPGDRSG*RKLKTGELLPL Trigger: CAGTGGCAGCAGTTCTCCTGTCTTCAACTTCCGTCACCCACTTCTGTCACCTGGTGGTCCCCAGTCTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 72 bp | GGGCAGCCTCGAGGAAGATGGGAGGCACAGAAGTCTTaGACCAGCTGGAGGTTGTATAGACTGTCTGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GQPRGRWEAQKS*TSWRLYRLSAT Trigger: TGTGGCAGACAGTCTATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCATCTTCCTCGAGGCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 72 bp | CTGCAGAGAGCTCAGAGCGGCACTCAGCTTACTGACTaGTCTATTGTAATCCCCAAGTCCCTCTGGGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LQRAQSGTQLTD*SIVIPKSLWGH Trigger: GTGCCCCCAGAGGGACTTGGGGATTACAATAGAGCAGTCAGTAAGCTGAGTGCCGCTCTGAGCTCTCTGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS GCA 72 bp | AGCGAGTCTGTACAGGCACCTGGCTGGGTGAAAACTTaGGTAGGTGAGGGAGGCTGTCTACATCATGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SESVQAPGWVKT*VGEGGCLHHGV Trigger: CACCCCATGATGTAGACAGCCTCCCTCACCTACGCAAGTTTTCACCCAGCCAGGTGCCTGTACAGACTCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CCA 72 bp | AGACTCGCCGCCGCCTTGGCTCGAGAGAAATCGTACTaGTCCAAAGACTTGATCTCGGGGACCAGGAAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RLAAALAREKSY*SKDLISGTRKV Trigger: GACTTTCCTGGTCCCCGAGATCAAGTCTTTGGACCAGTACGATTTCTCTCGAGCCAAGGCGGCGGCGAGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 72 bp | GCCTTGGCTCGAGAGAAATCGTACTGGTCCAAAGACTaGATCTCGGGGACCAGGAAAGTCCTCCGCAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ALAREKSYWSKD*ISGTRKVLRSG Trigger: GCCACTGCGGAGGACTTTCCTGGTCCCCGAGATCAAGTCTTTGGACCAGTACGATTTCTCTCGAGCCAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 72 bp | GGAAAGCAGGGAGCCCTTCGGGCAATGGCACGGTCCTaGCGATATCGAATAGGAACCAGCTTCCAGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: GKQGALRAMARS*RYRIGTSFQYQ Trigger: CTGGTACTGGAAGCTGGTTCCTATTCGATATCGCAAGGACCGTGCCATTGCCCGAAGGGCTCCCTGCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 90 bp | CTTCGGGCAATGGCACGGTCCTTGCGATATCGAATCATAGGGGGTTaGTTCCCCGACTCCTTCAAACAGAAGGCAATTGCGTGCGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRAMARSLRYRIIGG*FPDSFKQKAIACEG Trigger: GCCCTCGCACGCAATTGCCTTCTGTTTGAAGGAGTCGGGGAACAAACCCCCTATGATTCGATATCGCAAGGACCGTGCCATTGCCCGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000207077.2 ENSMUST00000207533.2 |
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| CDS TCA 72 bp | GGGGACCACCAGGTGACAGAAGTGGGTGACGGAAGTTaGAGACAGGAGAACTGCTGCCACTGTTGTTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GDHQVTEVGDGS*RQENCCHCCSE Trigger: CTCAGAACAACAGTGGCAGCAGTTCTCCTGTCTTCAACTTCCGTCACCCACTTCTGTCACCTGGTGGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 72 bp | GATGCACGCTGGGCTGCTTCTTGTTCTGTCTTCTCCTaGAGCCGCCGAACAGTTGTGTCTACCCAGAAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: DARWAASCSVFS*SRRTVVSTQKR Trigger: CCTTTTCTGGGTAGACACAACTGTTCGGCGGCTGCAGGAGAAGACAGAACAAGAAGCAGCCCAGCGTGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 72 bp | CCAGCCTCTGCCTATGCTTGGCAAAGATTGCCTCAATaGGTCGTTTCTGTGCCTCTATGGCTCGGCGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PASAYAWQRLPQ*VVSVPLWLGAS Trigger: AGAAGCGCCGAGCCATAGAGGCACAGAAACGACGCATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CCA 72 bp | GCAGGAAAGCGCTCTTGCCCAGCCTCTGCCTATGCTTaGCAAAGATTGCCTCAATGCGTCGTTTCTGTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGKRSCPASAYA*QRLPQCVVSVP Trigger: AGGCACAGAAACGACGCATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGCTGGGCAAGAGCGCTTTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CCA 72 bp | CTTACTGACTGCTCTATTGTAATCCCCAAGTCCCTCTaGGGGCACTGGGCCCAGGTCTGGAGAGAAGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: LTDCSIVIPKSL*GHWAQVWREGN Trigger: GTTACCTTCTCTCCAGACCTGGGCCCAGTGCCCCCAGAGGGACTTGGGGATTACAATAGAGCAGTCAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CAA 72 bp | AGCCGCCGAACAGTTGTGTCTACCCAGAAAAGGAGTTaGTGCTCCAAGCTGCTCAGAGCCAAGGGACCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRRTVVSTQKRS*CSKLLRAKGPG Trigger: ACCTGGTCCCTTGGCTCTGAGCAGCTTGGAGCACAAACTCCTTTTCTGGGTAGACACAACTGTTCGGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208036.2 ENSMUST00000208240.2 |
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| CDS CAA 72 bp | TGCAGGAAAGCGCTCTTGCCCAGCCTCTGCCTATGCTaGGCAAAGATTGCCTCAATGCGTCGTTTCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: CRKALLPSLCLC*AKIASMRRFCA Trigger: GGCACAGAAACGACGCATTGAGGCAATCTTTGCCAAGCATAGGCAGAGGCTGGGCAAGAGCGCTTTCCTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS TCA 72 bp | GGTTGTATAGACTGTCTGCCACAGACATGGGGTCCTTaGGGCACACCTCCTCAAGTCGTAATAGCTGGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: GCIDCLPQTWGP*GTPPQVVIAGD Trigger: GTCCCCAGCTATTACGACTTGAGGAGGTGTGCCTCAAGGACCCCATGTCTGTGGCAGACAGTCTATACAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS GCA 72 bp | TGTGAGTACCCTTGTCAAAGGTGCAAGCTTCAGCTCTaGCGGCCTTGCATGTTTTGGACTACGGGGTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CEYPCQRCKLQL*RPCMFWTTGCW Trigger: CCAACACCCCGTAGTCCAAAACATGCAAGGCCGGCAGAGCTGAAGCTTGCACCTTTGACAAGGGTACTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CAA 72 bp | AGATGGGAGGCACAGAAGTCTTGCACCAGCTGGAGGTaGTATAGACTGTCTGCCACAGACATGGGGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RWEAQKSCTSWR*YRLSATDMGSL Trigger: CAAGGACCCCATGTCTGTGGCAGACAGTCTATACAACCTCCAGCTGGTGCAAGACTTCTGTGCCTCCCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 90 bp | TTCTCCTGCAGCCGCCGAACAGTTGTGTCTACCCAGAAAAGGAGTTaGTGCTCCAAGCTGCTCAGAGCCAAGGGACCAGGTAGTGTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: FSCSRRTVVSTQKRS*CSKLLRAKGPGSVF Trigger: AAAGACACTACCTGGTCCCTTGGCTCTGAGCAGCTTGGAGCACAAACTCCTTTTCTGGGTAGACACAACTGTTCGGCGGCTGCAGGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208036.2 ENSMUST00000208240.2 |
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| CDS CAA 90 bp | TCAAAGCACATATACATCTCAGCCAACAGCACCACCAGGTTGACCTaGAGGGGTGGTGGGACATACAGCAAGTCTTCAAGGGACAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SKHIYISANSTTRLT*RGGGTYSKSSRDRG Trigger: CCCCCTGTCCCTTGAAGACTTGCTGTATGTCCCACCACCCCTCAAGGTCAACCTGGTGGTGCTGTTGGCTGAGATGTATATGTGCTTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 90 bp | GTCACATTTGGAAAGCAGGGAGCCCTTCGGGCAATGGCACGGTCCTaGCGATATCGAATCATAGGGGGTTTGTTCCCCGACTCCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VTFGKQGALRAMARS*RYRIIGGLFPDSFK Trigger: TTTGAAGGAGTCGGGGAACAAACCCCCTATGATTCGATATCGCAAGGACCGTGCCATTGCCCGAAGGGCTCCCTGCTTTCCAAATGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 |
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| CDS GCA 72 bp | TACATCATGGGGTGGTGTGAGTACCCTTGTCAAAGGTaGAAGCTTCAGCTCTGCCGGCCTTGCATGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: YIMGWCEYPCQR*KLQLCRPCMFW Trigger: CCAAAACATGCAAGGCCGGCAGAGCTGAAGCTTGCACCTTTGACAAGGGTACTCACACCACCCCATGATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CCA 72 bp | GAGAAGGCAACCATGAGAGCATCGATGACAGCTAGGTaGGCTCCCATGAGAATTGGCTGGTGTTTCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: EKATMRASMTAR*APMRIGWCFRS Trigger: TGACCTGAAACACCAGCCAATTCTCATGGGAGCCCACCTAGCTGTCATCGATGCTCTCATGGTTGCCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CCA 72 bp | CAGCCTTCACCAGCTGTTTCTTGCGTTCAGCAAAACTaGTCATCTTCACTTCGGAGTTGTTGGCTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QPSPAVSCVQQN*SSSLRSCWLLG Trigger: CCCCAGCAGCCAACAACTCCGAAGTGAAGATGACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAAGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CAA 72 bp | AGGTTGTATAGACTGTCTGCCACAGACATGGGGTCCTaGAGGCACACCTCCTCAAGTCGTAATAGCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: RLYRLSATDMGS*RHTSSSRNSWG Trigger: TCCCCAGCTATTACGACTTGAGGAGGTGTGCCTCAAGGACCCCATGTCTGTGGCAGACAGTCTATACAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 72 bp | TTGCGTTCAGCAAAACTGGTCATCTTCACTTCGGAGTaGTTGGCTGCTGGGGATGAAGCCACAGCTTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: LRSAKLVIFTSE*LAAGDEATALG Trigger: CCCCAAAGCTGTGGCTTCATCCCCAGCAGCCAACAACTCCGAAGTGAAGATGACCAGTTTTGCTGAACGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS CAA 90 bp | GGAGACCCCAATCCTGACTCAGCCTCAGCCTTCACCAGCTGTTTCTaGCGTTCAGCAAAACTGGTCATCTTCACTTCGGAGTTGTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: GDPNPDSASAFTSCF*RSAKLVIFTSELLA Trigger: AGCCAACAACTCCGAAGTGAAGATGACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAAGGCTGAGGCTGAGTCAGGATTGGGGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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| CDS TCA 72 bp | AGGCTTGTCTTCGTCCTTATAAAAGAATCCAAGCCCTaGTCGGGGCTCTCCCTCAGAAGATGCCTCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RLVFVLIKESKP*SGLSLRRCLFL Trigger: GAGGAAGAGGCATCTTCTGAGGGAGAGCCCCGATCAGGGCTTGGATTCTTTTATAAGGACGAAGACAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 72 bp | ATATACATCTCAGCCAACAGCACCACCAGGTTGACCTaGAGGGGTGGTGGGACATACAGCAAGTCTTCAAGG | + |
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Preference number: 6 (lower is better) Translates to: IYISANSTTRLT*RGGGTYSKSSR Trigger: CCTTGAAGACTTGCTGTATGTCCCACCACCCCTCAAGGTCAACCTGGTGGTGCTGTTGGCTGAGATGTATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 ENSMUST00000207712.2 ENSMUST00000207970.2 ENSMUST00000208240.2 |
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| CDS CAA 72 bp | ATGGCACGGTCCTTGCGATATCGAATCATAGGGGGTTaGTTCCCCGACTCCTTCAAACAGAAGGCAATTGCG | + |
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Preference number: 6 (lower is better) Translates to: MARSLRYRIIGG*FPDSFKQKAIA Trigger: CGCAATTGCCTTCTGTTTGAAGGAGTCGGGGAACAAACCCCCTATGATTCGATATCGCAAGGACCGTGCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207533.2 |
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| CDS CAA 72 bp | AATCCTGACTCAGCCTCAGCCTTCACCAGCTGTTTCTaGCGTTCAGCAAAACTGGTCATCTTCACTTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: NPDSASAFTSCF*RSAKLVIFTSE Trigger: CTCCGAAGTGAAGATGACCAGTTTTGCTGAACGCAAGAAACAGCTGGTGAAGGCTGAGGCTGAGTCAGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000057028.15 ENSMUST00000171962.3 ENSMUST00000207077.2 ENSMUST00000207432.2 ENSMUST00000207970.2 |
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