Pregenerated sensors for CAMKV (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032936Ensembl transcript IDs: ENSMUST00000035700.14, ENSMUST00000193533.6, ENSMUST00000194206.2, ENSMUST00000195219.2
Found 244 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CACACCTTCCCGTGCAGGAGCCTAACACTGCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGCAAGGCCACCCATTTAGGGCCTGGG | + |
Preference number: 1 (lower is better) Translates to: HTFPCRSLTLLTGPR*RTSSQGKATHLGPG Trigger: CCCAGGCCCTAAATGGGTGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCAGTGTTAGGCTCCTGCACGGGAAGGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR GCA 90 bp | CACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCCCGTaGAGGAGCCTAACACTGCTGACAGGGCCTCGCTGGAGGACCAGC | + |
Preference number: 1 (lower is better) Translates to: HTPRAAQTPQVHTFP*RSLTLLTGPRWRTS Trigger: GCTGGTCCTCCAGCGAGGCCCTGTCAGCAGTGTTAGGCTCCTGCACGGGAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR CCA 90 bp | ACACCAGCCCTCCCTATCCAGCTCACAGGAAGGAGCCAGATAGGCTaGGGCACTGTACTCTGTTCTCCTAGGCGTCGCTGCTGTGTCCGA | + |
Preference number: 1 (lower is better) Translates to: TPALPIQLTGRSQIG*GTVLCSPRRRCCVR Trigger: TCGGACACAGCAGCGACGCCTAGGAGAACAGAGTACAGTGCCCCAGCCTATCTGGCTCCTTCCTGTGAGCTGGATAGGGAGGGCTGGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR TCA 90 bp | CCACAGCTAACATGCAATGCCTGCTCCCTACCACGTGACCAGACTTaGCTTAAAGCACACTGCCCTAGGTTTTCTGCATCCTCTCTTGCA | + |
Preference number: 1 (lower is better) Translates to: PQLTCNACSLPRDQT*LKAHCPRFSASSLA Trigger: TGCAAGAGAGGATGCAGAAAACCTAGGGCAGTGTGCTTTAAGTCAAGTCTGGTCACGTGGTAGGGAGCAGGCATTGCATGTTAGCTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR TCA 90 bp | AAGAATCGGGATACAGAGCAACCCGCTACAGGACTCAGGAGGCTATaGAATAACACAAGGATCTTCAAGAGGGAAGATCGCCACCCCCAC | + |
Preference number: 1 (lower is better) Translates to: KNRDTEQPATGLRRL*NNTRIFKREDRHPH Trigger: GTGGGGGTGGCGATCTTCCCTCTTGAAGATCCTTGTGTTATTTCATAGCCTCCTGAGTCCTGTAGCGGGTTGCTCTGTATCCCGATTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR TCA 90 bp | ACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCTaGGCAATACCTCAGCCTCTGATGGTAGACAAAGAGGAAAAGCCT | + |
Preference number: 1 (lower is better) Translates to: TVVYFLIPARATSHG*AIPQPLMVDKEEKP Trigger: AGGCTTTTCCTCTTTGTCTACCATCAGAGGCTGAGGTATTGCTCAGCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR GCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGGCCACAAGGAATCCATaGAGGGGCTGGGGCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLATRNP*RGWGWP Trigger: GGGCCAGCCCCAGCCCCTGCATGGATTCCTTGTGGC...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGC | + |
Preference number: 2 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLLTGPR*RTSSQG Trigger: GCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAG...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR GCA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGACGCAGCCTATGAGGTaGTGCCACGCCTCCCTGGGA | + |
Preference number: 2 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRTQPMR*CHASLG Trigger: TCCCAGGGAGGCGTGGCAGCACCTCATAGGCTGCGT...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CCA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGAAGACTGCTCTCCCATaGCCCCCAGGCATGCCCCAC | + |
Preference number: 2 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRKTALP*PPGMPH Trigger: GTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTT...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR GCA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCGCCACAAGGAATCCATaGAGGGGCTGGGGCTGGCCC | + |
Preference number: 2 (lower is better) Translates to: ASLRELGNCSLLPHPSQSATRNP*RGWGWP Trigger: GGGCCAGCCCCAGCCCCTGCATGGATTCCTTGTGGC...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCGGCTGGCCCTGCCTCTaGCCTGCCCGCCACTCACAT | + |
Preference number: 2 (lower is better) Translates to: LLRASLRELGNCSLLPHPGWPCL*PARHSH Trigger: ATGTGAGTGGCGGGCAGGCCAGAGGCAGGGCCAGCC...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR GCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCCATGGCCCCCAGGCATaGCCCACTGGGATGAGGGAG | + |
Preference number: 2 (lower is better) Translates to: LLRASLRELGNCSLLPHPHGPQA*PTGMRE Trigger: CTCCCTCATCCCAGTGGGGCATGCCTGGGGGCCATG...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CCA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGGGCTGGCCCTGCCTCTaGCCTGCCCGCCACTCACAT | + |
Preference number: 2 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQGWPCL*PARHSH Trigger: ATGTGAGTGGCGGGCAGGCCAGAGGCAGGGCCAGCC...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR TCA 90 bp | ACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGCTGTGAAAATCTGCTGCTGTaGAAAGCATGCTCCCAACGC | + |
Preference number: 2 (lower is better) Translates to: TMECRARARTSVAACSGCENLLL*KACSQR Trigger: GCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTC...ACAGCCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CCA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGC | + |
Preference number: 2 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQLTGPR*RTSSQG Trigger: GCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAG...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR TCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGAGCAAGGACCCCCTaGGTATCCCTAGAGCAGCAT | + |
Preference number: 2 (lower is better) Translates to: LLRASLRELGNCSLLPHPRARTP*VSLEQH Trigger: ATGCTGCTCTAGGGATACTCAGGGGGTCCTTGCTCT...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CCA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGAAGACTGCTCTCCCATaGCCCCCAGGCATGCCCCAC | + |
Preference number: 2 (lower is better) Translates to: YPFSLPLLRIPTANMQCLKTALP*PPGMPH Trigger: GTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTT...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR CAA 90 bp | AACACCTCCCTCCCCGTGGCCAGCTCCAGAAAGATGAAGTATTCCTaGCGGGTCACAAACACATCTACCAGCTGCAGGATGTTGGGGTGC | + |
Preference number: 2 (lower is better) Translates to: NTSLPVASSRKMKYS*RVTNTSTSCRMLGC Trigger: GCACCCCAACATCCTGCAGCTGGTAGATGTGTTTGTGACCCGCAAGGAATACTTCATCTTTCTGGAGCTGGCCACGGGGAGGGAGGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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3UTR-3UTR CCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAAGGGCAGGACCACCATaGAGTGCCGAGCAAGGGCAA | + |
Preference number: 2 (lower is better) Translates to: LPGSVGTQLAHQPSHTRARAGPP*SAEQGQ Trigger: TTGCCCTTGCTCGGCACTCCATGGTGGTCCTGCCCT...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR TCA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACAAGAGCAAGGACCCCCTaGGTATCCCTAGAGCAGCAT | + |
Preference number: 2 (lower is better) Translates to: RELGNCSLLPHPSQSYFTRARTP*VSLEQH Trigger: ATGCTGCTCTAGGGATACTCAGGGGGTCCTTGCTCT...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR GCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCATCCCCACAGCTAACATaGAATGCCTGCTCCCTACCA | + |
Preference number: 2 (lower is better) Translates to: LPGSVGTQLAHQPSHTRASPQLT*NACSLP Trigger: TGGTAGGGAGCAGGCATTGCATGTTAGCTGTGGGGA...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR GCA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGTCCCCACAGCTAACATaGAATGCCTGCTCCCTACCA | + |
Preference number: 2 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQSPQLT*NACSLP Trigger: TGGTAGGGAGCAGGCATTGCATGTTAGCTGTGGGGA...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR GCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCGAGCAGAAAATCTGCTaGTGTGAAAAGCATGCTCCC | + |
Preference number: 2 (lower is better) Translates to: SWGTVVYFLIPARATSHGEQKIC*CEKHAP Trigger: GGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTC...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR CAA 90 bp | AGACTTGACTTAAAGCACACTGCCCTAGGTTTTCTGCATCCTCTCTaGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTC | + |
Preference number: 2 (lower is better) Translates to: RLDLKHTALGFLHPL*HTPRAAQTPQVHTF Trigger: GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATGCAGAAAACCTAGGGCAGTGTGCTTTAAGTCAAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR TCA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACAGGACTCAGGAGGCTATaGAATAACACAAGGATCTTC | + |
Preference number: 2 (lower is better) Translates to: RELGNCSLLPHPSQSYFTGLRRL*NNTRIF Trigger: GAAGATCCTTGTGTTATTTCATAGCCTCCTGAGTCC...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CCA 90 bp | CCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGTTACACCCATTTAGGGCCTaGGAAAGGATGAGGTTTGCA | + |
Preference number: 2 (lower is better) Translates to: PEALQGDVYLPGSVGTQLHPFRA*ERMRFA Trigger: TGCAAACCTCATCCTTTCCCAGGCCCTAAATGGGTG...TAACTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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3UTR CCA 72 bp | GACCAGCTCTCAGGGCAAGGCCACCCATTTAGGGCCTaGGAAAGGATGAGGTTTGCAGGGCCTGCCTGGGGG | + |
Preference number: 3 (lower is better) Translates to: DQLSGQGHPFRA*ERMRFAGPAWG Trigger: CCCCCAGGCAGGCCCTGCAAACCTCATCCTTTCCCAGGCCCTAAATGGGTGGCCTTGCCCTGAGAGCTGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR GCA 72 bp | CCCGCCACTCACATACATCCACACAGGAGACAAGACTaGTCTCCCATGGCCCCCAGGCATGCCCCACTGGGA | + |
Preference number: 3 (lower is better) Translates to: PATHIHPHRRQD*SPMAPRHAPLG Trigger: TCCCAGTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAGTGGCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR GCA 72 bp | AGTAGGCCACAGCCTCCAAGACCTGCCGCACCACGTTaGTCGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCA | + |
Preference number: 3 (lower is better) Translates to: SRPQPPRPAAPR*SCLAPSSSPGP Trigger: TGGACCAGGGCTACTACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGTCTTGGAGGCTGTGGCCTACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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3UTR CCA 72 bp | CCGTGCAGGAGCCTAACACTGCTGACAGGGCCTCGCTaGAGGACCAGCTCTCAGGGCAAGGCCACCCATTTA | + |
Preference number: 3 (lower is better) Translates to: PCRSLTLLTGPR*RTSSQGKATHL Trigger: TAAATGGGTGGCCTTGCCCTGAGAGCTGGTCCTCCAGCGAGGCCCTGTCAGCAGTGTTAGGCTCCTGCACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR GCA 72 bp | AGAGCAGCCCAAACACCACAGGTACACACCTTCCCGTaGAGGAGCCTAACACTGCTGACAGGGCCTCGCTGG | + |
Preference number: 3 (lower is better) Translates to: RAAQTPQVHTFP*RSLTLLTGPRW Trigger: CCAGCGAGGCCCTGTCAGCAGTGTTAGGCTCCTGCACGGGAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CAA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGTTTCTGCATCCTCTCTaGCACACTCCTAGAGCAGCC | + |
Preference number: 3 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLFLHPL*HTPRAA Trigger: GGCTGCTCTAGGAGTGTGCAAGAGAGGATGCAGAAA...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR CCA 72 bp | ACATACATCCACACAGGAGACAAGACTGCTCTCCCATaGCCCCCAGGCATGCCCCACTGGGATGAGGGAGCT | + |
Preference number: 3 (lower is better) Translates to: TYIHTGDKTALP*PPGMPHWDEGA Trigger: AGCTCCCTCATCCCAGTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR CCA 72 bp | CTCCCTATCCAGCTCACAGGAAGGAGCCAGATAGGCTaGGGCACTGTACTCTGTTCTCCTAGGCGTCGCTGC | + |
Preference number: 3 (lower is better) Translates to: LPIQLTGRSQIG*GTVLCSPRRRC Trigger: GCAGCGACGCCTAGGAGAACAGAGTACAGTGCCCCAGCCTATCTGGCTCCTTCCTGTGAGCTGGATAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CAA 90 bp | AGACCTGCCGCACCACGTTGCTCGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCAAAGATGAAGTATTCCTaGCGGGTCACAAACACATCT | + |
Preference number: 3 (lower is better) Translates to: RPAAPRCSCLAPSSSPGPKMKYS*RVTNTS Trigger: AGATGTGTTTGTGACCCGCAAGGAATACTTCATCTT...TGGACCAGGGCTACTACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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3UTR-3UTR CAA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCTTTCTGCATCCTCTCTaGCACACTCCTAGAGCAGCC | + |
Preference number: 3 (lower is better) Translates to: SWGTVVYFLIPARATSHGFLHPL*HTPRAA Trigger: GGCTGCTCTAGGAGTGTGCAAGAGAGGATGCAGAAA...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR-3UTR CAA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACAGCAAAGGTCTCTTTCTaGGTAATGGCATCTAGGAAG | + |
Preference number: 3 (lower is better) Translates to: RELGNCSLLPHPSQSYFTAKVSF*VMASRK Trigger: CTTCCTAGATGCCATTACCAAGAAAGAGACCTTTGC...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR TCA 72 bp | TACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCTaGGCAATACCTCAGCCTCTGATGGTAGACAAAGAG | + |
Preference number: 3 (lower is better) Translates to: YFLIPARATSHG*AIPQPLMVDKE Trigger: CTCTTTGTCTACCATCAGAGGCTGAGGTATTGCTCAGCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR CCA 72 bp | AGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATaGCTGAGCAATACCTCAGCCTCTGATGGTAGACAA | + |
Preference number: 3 (lower is better) Translates to: SLLPHPSQSYFT*LSNTSASDGRQ Trigger: TTGTCTACCATCAGAGGCTGAGGTATTGCTCAGCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR TCA 72 bp | GATACAGAGCAACCCGCTACAGGACTCAGGAGGCTATaGAATAACACAAGGATCTTCAAGAGGGAAGATCGC | + |
Preference number: 3 (lower is better) Translates to: DTEQPATGLRRL*NNTRIFKREDR Trigger: GCGATCTTCCCTCTTGAAGATCCTTGTGTTATTTCATAGCCTCCTGAGTCCTGTAGCGGGTTGCTCTGTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | ATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGCCCCACTGGACTGGCCCCAGAGGCTaGGGCAGCTCCACCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: IHTGDKTALPWPPGMPHWTGPRG*GSSTCS Trigger: GCTGCAGGTGGAGCTGCCTCAGCCTCTGGGGCCAGT...CCAGTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGCCCGGAGCCGCTTCATaGGAGTGGTCACTCGGACAG | + |
Preference number: 4 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLPGAAS*EWSLGQ Trigger: CTGTCCGAGTGACCACTCTCATGAAGCGGCTCCGGG...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | ACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGCTGTGGCAGGGCACTGCTTTaGGTGGCGGGCACTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: TMECRARARTSVAACSGCGRALL*VAGTVL Trigger: GAGCACAGTGCCCGCCACTCAAAGCAGTGCCCTGCC...ACAGCCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGGGTGGCTGCTGCCTTTaGAGCTGGCAGGGCACTGCT | + |
Preference number: 4 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLGGCCL*SWQGTA Trigger: AGCAGTGCCCTGCCAGCTGCAAAGGCAGCAGCCACC...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | ATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGCCCCACTGGCGGCTCAGGGGTGGCTaGTGCCTTTGCAGCTGGCAG | + |
Preference number: 4 (lower is better) Translates to: IHTGDKTALPWPPGMPHWRLRGG*CLCSWQ Trigger: CTGCCAGCTGCAAAGGCAGCAGCCACCCCTGAGCCG...CCAGTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | ATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGCCCCACTGGCACCCTCTAGGGCTGTaGTGTCCGGCTGGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: IHTGDKTALPWPPGMPHWHPLGL*CPAGPQ Trigger: CTGTGGCCCAGCCGGACAGCACAGCCCTAGAGGGTG...CCAGTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR TCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGTGGCCTCTTCTGCGGTaGTCCGCTGGTCTTGCTCCA | + |
Preference number: 4 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLWPLLR*SAGLAP Trigger: TGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCA...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR GCA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGCTGCCTTCCGCACCTTaGGGCCATCACGCTTCTGGA | + |
Preference number: 4 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRLPSAP*GHHASG Trigger: TCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAG...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGGCTGCCATCTGTGGCTaGAGTGGCGCTGCCATCTGT | + |
Preference number: 4 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLAAICG*SGAAIC Trigger: ACAGATGGCAGCGCCACTCCAGCCACAGATGGCAGC...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGACTCCCGTCAGTGGCTaGGGTGATGCTGCCATCCGT | + |
Preference number: 4 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRTPVSG*GDAAIR Trigger: ACGGATGGCAGCATCACCCCAGCCACTGACGGGAGT...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGACTCCCGTCAGTGGCTaGGGTGATGCTGCCATCCGT | + |
Preference number: 4 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLTPVSG*GDAAIR Trigger: ACGGATGGCAGCATCACCCCAGCCACTGACGGGAGT...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | ACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGCTGTCTAGAGGGTGGAGCCTaGCCTGTGGCACCCTCTAGG | + |
Preference number: 4 (lower is better) Translates to: TMECRARARTSVAACSGCLEGGA*PVAPSR Trigger: CCTAGAGGGTGCCACAGGCCAGGCTCCACCCTCTAG...ACAGCCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR TCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGCCTCCATCAGCCTGGTaGCCAGGTCTTTGGCTGCTT | + |
Preference number: 4 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLPPSAW*PGLWLL Trigger: AAGCAGCCAAAGACCTGGTCACCAGGCTGATGGAGG...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCACTGGCCCCAGAGGCTaGGGCAGCTCCACCTGCAGC | + |
Preference number: 4 (lower is better) Translates to: LLRASLRELGNCSLLPHPTGPRG*GSSTCS Trigger: GCTGCAGGTGGAGCTGCCTCAGCCTCTGGGGCCAGT...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR GCA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGAATCTCGTTCTTGGCTaGCTTCCGCACCTTGCGGCC | + |
Preference number: 4 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRNLVLG*LPHLAA Trigger: GGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATT...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLVIRWS*STSISL Trigger: CAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCAC...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR GCA 90 bp | ACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGCTGTTCCAGACTGCTCTGGTaGCCGGAGCCGCTTCATGAG | + |
Preference number: 4 (lower is better) Translates to: TMECRARARTSVAACSGCSRLLW*PEPLHE Trigger: CTCATGAAGCGGCTCCGGGCACCAGAGCAGTCTGGA...ACAGCCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCCTCAGGGGTGGCTGCTaGCTTTGCAGCTGGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: ASLRELGNCSLLPHPSQSLRGGC*LCSWQG Trigger: GCCCTGCCAGCTGCAAAGGCAGCAGCCACCCCTGAG...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR CCA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGTGTTCCAGACTGCTCTaGTGCCCGGAGCCGCTTCAT | + |
Preference number: 4 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRCSRLL*CPEPLH Trigger: ATGAAGCGGCTCCGGGCACCAGAGCAGTCTGGAACA...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCGTGGAGCCTGGCCTGTaGCACCCTCTAGGGCTGTGC | + |
Preference number: 4 (lower is better) Translates to: ASLRELGNCSLLPHPSQSVEPGL*HPLGLC Trigger: GCACAGCCCTAGAGGGTGCCACAGGCCAGGCTCCAC...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCCGGCTCAGGGGTGGCTaGTGCCTTTGCAGCTGGCAG | + |
Preference number: 4 (lower is better) Translates to: LLRASLRELGNCSLLPHPRLRGG*CLCSWQ Trigger: CTGCCAGCTGCAAAGGCAGCAGCCACCCCTGAGCCG...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | ACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGCTGTTCTGCGGTGATCCGCTaGTCTTGCTCCACCTCCATC | + |
Preference number: 4 (lower is better) Translates to: TMECRARARTSVAACSGCSAVIR*SCSTSI Trigger: GATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGA...ACAGCCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCGCTGCCATCCGTGGCTaGGGTGACGCTGCCATCTGT | + |
Preference number: 4 (lower is better) Translates to: ASLRELGNCSLLPHPSQSAAIRG*GDAAIC Trigger: ACAGATGGCAGCGTCACCCCAGCCACGGATGGCAGC...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | CTCACATACATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGCCCGGAGCCGCTTCATaGGAGTGGTCACTCGGACAG | + |
Preference number: 4 (lower is better) Translates to: LTYIHTGDKTALPWPPGMPGAAS*EWSLGQ Trigger: CTGTCCGAGTGACCACTCTCATGAAGCGGCTCCGGG...CATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CTCACATACATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGACCTGCAGCTGCAGCTaGAGCTGCAGCAGCGATGGC | + |
Preference number: 4 (lower is better) Translates to: LTYIHTGDKTALPWPPGMTCSCS*SCSSDG Trigger: GCCATCGCTGCTGCAGCTGCAGCTGCAGCTGCAGGT...CATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | GGCCACAGCCTCCAAGACCTGCCGCACCACGTTGCTCGTGTCTCGCTCCGAGTACGGCCATCACGCTTCTaGAACTTCTTACAGGTGTGC | + |
Preference number: 4 (lower is better) Translates to: GHSLQDLPHHVARVSLRVRPSRF*NFLQVC Trigger: GCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCG...TACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGTCTTGGAGGCTGTGGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR CCA 90 bp | CCTGCCGCACCACGTTGCTCGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCAGGATTCCAATCTCGTTCTTaGCTGCCTTCCGCACCTTGC | + |
Preference number: 4 (lower is better) Translates to: PAAPRCSCLAPSSSPGPGFQSRS*LPSAPC Trigger: GCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAA...TCCTGGACCAGGGCTACTACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR CCA 90 bp | ATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGCCCCACTGGCCGGAAATCCATTCGTaGGAGATGGCCTCTTCTGCG | + |
Preference number: 4 (lower is better) Translates to: IHTGDKTALPWPPGMPHWPEIHS*EMASSA Trigger: CGCAGAAGAGGCCATCTCCCACGAATGGATTTCCGG...CCAGTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCGCTGCCATCTGTGGCTaGAGTGGCGCTGCCATCTGT | + |
Preference number: 4 (lower is better) Translates to: ASLRELGNCSLLPHPSQSAAICG*SGAAIC Trigger: ACAGATGGCAGCGCCACTCCAGCCACAGATGGCAGC...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | ACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGCTGTTGCTGCCTTTGCAGCTaGCAGGGCACTGCTTTGAGT | + |
Preference number: 4 (lower is better) Translates to: TMECRARARTSVAACSGCCCLCS*QGTALS Trigger: ACTCAAAGCAGTGCCCTGCCAGCTGCAAAGGCAGCA...ACAGCCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGGAAGGGCGGGTTGCCTaGAAGCAGGATATACATGAT | + |
Preference number: 4 (lower is better) Translates to: DHHGVPSKGKDQRGCLFREGRVA*KQDIHD Trigger: ATCATGTATATCCTGCTTTCAGGCAACCCGCCCTTC...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR GCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCAGCTGCAGCTGCAGCTaGAGCAGCGATGGCCCCACC | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFSCSCS*SSDGPT Trigger: GGTGGGGCCATCGCTGCTGCAGCTGCAGCTGCAGCT...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCGAGTGGCGGGCACTGTaGTCTCTTCTGTGGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: LLRASLRELGNCSLLPHPEWRAL*SLLWLV Trigger: CACCAGCCACAGAAGAGAGCACAGTGCCCGCCACTC...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCCACCCTCTAGGGCTGTaGTGTCCGGCTGGGCCACAG | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGHPLGL*CPAGPQ Trigger: CTGTGGCCCAGCCGGACAGCACAGCCCTAGAGGGTG...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | CTCACATACATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGCAGCAGCCCCAGGAGTaGCAGCGTCTGAAGCAGACT | + |
Preference number: 4 (lower is better) Translates to: LTYIHTGDKTALPWPPGMQQPQE*QRLKQT Trigger: AGTCTGCTTCAGACGCTGCCACTCCTGGGGCTGCTG...CATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTCCTTTACTAGAGGGTaGAGCCTGGCCTGTGGCACC | + |
Preference number: 4 (lower is better) Translates to: ASLRELGNCSLLPHPSQSSFTRG*SLACGT Trigger: GGTGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGA...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGAGGTCTTTGGCTGCTTaGGAAATATCGTCCCAGTAC | + |
Preference number: 4 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRRSLAA*EISSQY Trigger: GTACTGGGACGATATTTCTCAAGCAGCCAAAGACCT...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGGGCAGGGCACTGCTTTaGGTGGCGGGCACTGTGCTC | + |
Preference number: 4 (lower is better) Translates to: YPFSLPLLRIPTANMQCLGRALL*VAGTVL Trigger: GAGCACAGTGCCCGCCACTCAAAGCAGTGCCCTGCC...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | ATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGCCCCACTGGAGCTTGAGGTTCCTGTaGACAATCTTGAGCGAGTGC | + |
Preference number: 4 (lower is better) Translates to: IHTGDKTALPWPPGMPHWSLRFL*TILSEC Trigger: GCACTCGCTCAAGATTGTGCACAGGAACCTCAAGCT...CCAGTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CTCACATACATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGGGAGATGGCCTCTTCTaGGGTGATCCGCTGGTCTTG | + |
Preference number: 4 (lower is better) Translates to: LTYIHTGDKTALPWPPGMGDGLF*GDPLVL Trigger: CAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCC...CATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAAGCTGCAGCTGCAGCTaGAGCAGCGATGGCCCCACC | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRASCSCS*SSDGPT Trigger: GGTGGGGCCATCGCTGCTGCAGCTGCAGCTGCAGCT...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCGGTGGCTGCTGCCTTTaGAGCTGGCAGGGCACTGCT | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGGGCCL*SWQGTA Trigger: AGCAGTGCCCTGCCAGCTGCAAAGGCAGCAGCCACC...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | GAAACTGGTGAAGCTAGCGAAAGACAGAAAGCCACAAGGAATCCATGCAGGGGCCTCAGGGGTGGCTGCTaGCTTTGCAGCTGGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: ETGEASERQKATRNPCRGLRGGC*LCSWQG Trigger: GCCCTGCCAGCTGCAAAGGCAGCAGCCACCCCTGAG...GCCCCTGCATGGATTCCTTGTGGCTTTCTGTCTTTCGCTAGCTTCACCAGTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CTCCAAGACCTGCCGCACCACGTTGCTCGTGTCTCGCTCCGAGTAGTAGCCCTGTACAGGTGTGCAGCTTaGCCGTTGTCTTGTCGTCTT | + |
Preference number: 4 (lower is better) Translates to: LQDLPHHVARVSLRVVALYRCAA*PLSCRL Trigger: AAGACGACAAGACAACGGGCAAGCTGCACACCTGTA...CAGGGCTACTACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGTCTTGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR CCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCGCTGCCATCCGTGGCTaGGGTGACGCTGCCATCTGT | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFAAIRG*GDAAIC Trigger: ACAGATGGCAGCGTCACCCCAGCCACGGATGGCAGC...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCGGGCACTGCTTTGAGTaGCGGGCACTGTGCTCTCTT | + |
Preference number: 4 (lower is better) Translates to: LLRASLRELGNCSLLPHPGHCFE*RALCSL Trigger: AAGAGAGCACAGTGCCCGCCACTCAAAGCAGTGCCC...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAGTGGAGCCTGGCCTGTaGCACCCTCTAGGGCTGTGC | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRAVEPGL*HPLGLC Trigger: GCACAGCCCTAGAGGGTGCCACAGGCCAGGCTCCAC...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCCTAGAGGGTGGAGCCTaGCCTGTGGCACCCTCTAGG | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGLEGGA*PVAPSR Trigger: CCTAGAGGGTGCCACAGGCCAGGCTCCACCCTCTAG...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGCCTGCCGCACCACGTTaGTCGTGTCTCGCTCCGAGT | + |
Preference number: 4 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQPAAPR*SCLAPS Trigger: ACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGG...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR GCA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGCCTGCCGCACCACGTTaGTCGTGTCTCGCTCCGAGT | + |
Preference number: 4 (lower is better) Translates to: YPFSLPLLRIPTANMQCLPAAPR*SCLAPS Trigger: ACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGG...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCTCCAGACTGCTCTGGTaGCCGGAGCCGCTTCATGAG | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGSRLLW*PEPLHE Trigger: CTCATGAAGCGGCTCCGGGCACCAGAGCAGTCTGGA...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAACCTGCAGCTGCAGCTaGAGCTGCAGCAGCGATGGC | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRATCSCS*SCSSDG Trigger: GCCATCGCTGCTGCAGCTGCAGCTGCAGCTGCAGGT...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCACCACCCTCTGTGGCTaGAGTAGCACTGGCCCCAGA | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFTTLCG*SSTGPR Trigger: TCTGGGGCCAGTGCTACTGCAGCCACAGAGGGTGGT...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGGCTGATGACAATCTTTaGGTTCTTCAGCCTGTTGTA | + |
Preference number: 4 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLADDNL*VLQPVV Trigger: TACAACAGGCTGAAGAACTCAAAGATTGTCATCAGC...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | GAAACTGGTGAAGCTAGCGAAAGACAGAAAGCCACAAGGAATCCATGCAGGGGCTGGCCTCTTCTGCGGTaGTCCGCTGGTCTTGCTCCA | + |
Preference number: 4 (lower is better) Translates to: ETGEASERQKATRNPCRGWPLLR*SAGLAP Trigger: TGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCA...GCCCCTGCATGGATTCCTTGTGGCTTTCTGTCTTTCGCTAGCTTCACCAGTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGCTCGTCTCCACCCTCTaGGACTCCTGGGCACATCCA | + |
Preference number: 4 (lower is better) Translates to: YPFSLPLLRIPTANMQCLLVSTL*DSWAHP Trigger: TGGATGTGCCCAGGAGTCTCAGAGGGTGGAGACGAG...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CTCACATACATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGTACAGGTGTGCAGCTTaGCCGTTGTCTTGTCCTTGG | + |
Preference number: 4 (lower is better) Translates to: LTYIHTGDKTALPWPPGMYRCAA*PLSCPW Trigger: CCAAGGACAAGACAACGGGCAAGCTGCACACCTGTA...CATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | AAGTATTCCTTGCGGGTCACAAACACATCTACCAGCTGCAGGATGTTGGGGTGCCTGCCTTCCGCACCTTaGGGCCATCACGCTTCTGGA | + |
Preference number: 4 (lower is better) Translates to: KYSLRVTNTSTSCRMLGCLPSAP*GHHASG Trigger: TCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAG...GCACCCCAACATCCTGCAGCTGGTAGATGTGTTTGTGACCCGCAAGGAATACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR GCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCAATCTCGTTCTTGGCTaGCTTCCGCACCTTGCGGCC | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGNLVLG*LPHLAA Trigger: GGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATT...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR GCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTG | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGVIRWS*STSISL Trigger: CAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCAC...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGACCACCCTCTGTGGCTaGAGTAGCACTGGCCCCAGA | + |
Preference number: 4 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQTTLCG*SSTGPR Trigger: TCTGGGGCCAGTGCTACTGCAGCCACAGAGGGTGGT...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
||
CDS-3UTR CCA 90 bp | TGGCCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGCCGTCCTACCACTTCTaGTGCCAGATACTCCGGGGT | + |
Preference number: 4 (lower is better) Translates to: WPEALQGDVYLPGSVGTQPSYHF*CQILRG Trigger: ACCCCGGAGTATCTGGCACCAGAAGTGGTAGGACGG...CTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR CCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCTCTGCGGTGATCCGCTaGTCTTGCTCCACCTCCATC | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFSAVIR*SCSTSI Trigger: GATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGA...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGCAGCAGCCCCAGGAGTaGCAGCGTCTGAAGCAGACT | + |
Preference number: 4 (lower is better) Translates to: YPFSLPLLRIPTANMQCLQQPQE*QRLKQT Trigger: AGTCTGCTTCAGACGCTGCCACTCCTGGGGCTGCTG...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCGGTGCTTCACCATCTTaGGGATTCCAATCTCGTTCT | + |
Preference number: 4 (lower is better) Translates to: ASLRELGNCSLLPHPSQSGASPS*GFQSRS Trigger: AGAACGAGATTGGAATCCTCAAGATGGTGAAGCACC...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGTTACTGCCTTCCGCACCTTaGGGCCATCACGCTTCTGGA | + |
Preference number: 4 (lower is better) Translates to: PEALQGDVYLPGSVGTQLLPSAP*GHHASG Trigger: TCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAG...TAACTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR GCA 90 bp | CTCACATACATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGAACACATCTACCAGCTaGAGGATGTTGGGGTGCTTC | + |
Preference number: 4 (lower is better) Translates to: LTYIHTGDKTALPWPPGMNTSTS*RMLGCF Trigger: GAAGCACCCCAACATCCTGCAGCTGGTAGATGTGTT...CATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTGTAGCACTACGATCTaGAGAGGCTATGTCATCGCT | + |
Preference number: 4 (lower is better) Translates to: ASLRELGNCSLLPHPSQSCSTTI*RGYVIA Trigger: AGCGATGACATAGCCTCTGCAGATCGTAGTGCTACA...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAGAGTGGCGGGCACTGTaGTCTCTTCTGTGGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: PEALQGDVYLPGSVGTQLEWRAL*SLLWLV Trigger: CACCAGCCACAGAAGAGAGCACAGTGCCCGCCACTC...TAACTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR CCA 90 bp | AGCCTCCAAGACCTGCCGCACCACGTTGCTCGTGTCTCGCTCCGAGTAGTAGCCGTCAGTCACTTCCGATaGCTGGTTATAGTTCTTCTT | + |
Preference number: 4 (lower is better) Translates to: SLQDLPHHVARVSLRVVAVSHFR*LVIVLL Trigger: AAGAAGAACTATAACCAGCCATCGGAAGTGACTGAC...GGCTACTACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGTCTTGGAGGCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR CCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCCCGTTGTCTTGTCCTTaGCCCGGAAGATTTCACAGA | + |
Preference number: 4 (lower is better) Translates to: LLRASLRELGNCSLLPHPPLSCP*PGRFHR Trigger: TCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGG...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGTGTTCCAGACTGCTCTaGTGCCCGGAGCCGCTTCAT | + |
Preference number: 4 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQCSRLL*CPEPLH Trigger: ATGAAGCGGCTCCGGGCACCAGAGCAGTCTGGAACA...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCGCTGCCATCTGTGGCTaGTGTAGCACTACGATCTGC | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFAAICG*CSTTIC Trigger: GCAGATCGTAGTGCTACACCAGCCACAGATGGCAGC...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCGCTGCCATCTGTGGCTaGTGTAGCACTACGATCTGC | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGAAICG*CSTTIC Trigger: GCAGATCGTAGTGCTACACCAGCCACAGATGGCAGC...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAGGGCACTGCTTTGAGTaGCGGGCACTGTGCTCTCTT | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRAGHCFE*RALCSL Trigger: AAGAGAGCACAGTGCCCGCCACTCAAAGCAGTGCCC...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCATCCTTTACTAGAGGGTaGAGCCTGGCCTGTGGCACC | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRASFTRG*SLACGT Trigger: GGTGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGA...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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3UTR CAA 72 bp | CTCCCCGTGGCCAGCTCCAGAAAGATGAAGTATTCCTaGCGGGTCACAAACACATCTACCAGCTGCAGGATG | + |
Preference number: 4 (lower is better) Translates to: LPVASSRKMKYS*RVTNTSTSCRM Trigger: CATCCTGCAGCTGGTAGATGTGTTTGTGACCCGCAAGGAATACTTCATCTTTCTGGAGCTGGCCACGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR TCA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGGTCTTTGGCTGCTTaGGAAATATCGTCCCAGTAC | + |
Preference number: 4 (lower is better) Translates to: LLRASLRELGNCSLLPHPRSLAA*EISSQY Trigger: GTACTGGGACGATATTTCTCAAGCAGCCAAAGACCT...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCTACAGGTGTGCAGCTTaGCCGTTGTCTTGTCCTTGG | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFYRCAA*PLSCPW Trigger: CCAAGGACAAGACAACGGGCAAGCTGCACACCTGTA...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | CCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGTTAGGAGATGGCCTCTTCTaGGGTGATCCGCTGGTCTTG | + |
Preference number: 4 (lower is better) Translates to: PEALQGDVYLPGSVGTQLGDGLF*GDPLVL Trigger: CAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCC...TAACTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR CCA 90 bp | TGGCCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGCGGCCATCACGCTTCTaGAACTTCTTACAGGTGTGC | + |
Preference number: 4 (lower is better) Translates to: WPEALQGDVYLPGSVGTQRPSRF*NFLQVC Trigger: GCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCG...CTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR CCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCCGGCCATCACGCTTCTaGAACTTCTTACAGGTGTGC | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFRPSRF*NFLQVC Trigger: GCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCG...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCTTCCAATCTCGTTCTTaGCTGCCTTCCGCACCTTGC | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFFQSRS*LPSAPC Trigger: GCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAA...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCTTCCAATCTCGTTCTTaGCTGCCTTCCGCACCTTGC | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGFQSRS*LPSAPC Trigger: GCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAA...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCACCGGAAATCCATTCGTaGGAGATGGCCTCTTCTGCG | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRAPEIHS*EMASSA Trigger: CGCAGAAGAGGCCATCTCCCACGAATGGATTTCCGG...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGTGCTGCCTTTGCAGCTaGCAGGGCACTGCTTTGAGT | + |
Preference number: 4 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQCCLCS*QGTALS Trigger: ACTCAAAGCAGTGCCCTGCCAGCTGCAAAGGCAGCA...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACACCAGCTCCAGAAAGATaGAGTATTCCTTGCGGGTCA | + |
Preference number: 4 (lower is better) Translates to: RELGNCSLLPHPSQSYFTPAPER*SIPCGS Trigger: TGACCCGCAAGGAATACTTCATCTTTCTGGAGCTGG...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCCCAGCTCCAGAAAGATaGAGTATTCCTTGCGGGTCA | + |
Preference number: 4 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFPAPER*SIPCGS Trigger: TGACCCGCAAGGAATACTTCATCTTTCTGGAGCTGG...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACAAACACATCTACCAGCTaGAGGATGTTGGGGTGCTTC | + |
Preference number: 4 (lower is better) Translates to: RELGNCSLLPHPSQSYFTNTSTS*RMLGCF Trigger: GAAGCACCCCAACATCCTGCAGCTGGTAGATGTGTT...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | TGGCCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGCCGTTGTCTTGTCCTTaGCCCGGAAGATTTCACAGA | + |
Preference number: 4 (lower is better) Translates to: WPEALQGDVYLPGSVGTQPLSCP*PGRFHR Trigger: TCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGG...CTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR TCA 90 bp | TGGCCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGCTAGGTTTTCCAGCTTaGGGTTCCTGTGCACAATCT | + |
Preference number: 4 (lower is better) Translates to: WPEALQGDVYLPGSVGTQLGFPA*GSCAQS Trigger: AGATTGTGCACAGGAACCTCAAGCTGGAAAACCTAG...CTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR GCA 90 bp | AAGATGAAGTATTCCTTGCGGGTCACAAACACATCTACCAGCTGCAGGATGTTGAATCTCGTTCTTGGCTaGCTTCCGCACCTTGCGGCC | + |
Preference number: 4 (lower is better) Translates to: KMKYSLRVTNTSTSCRMLNLVLG*LPHLAA Trigger: GGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATT...CAACATCCTGCAGCTGGTAGATGTGTTTGTGACCCGCAAGGAATACTTCATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR GCA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGAGCTTGAGGTTCCTGTaGACAATCTTGAGCGAGTGC | + |
Preference number: 4 (lower is better) Translates to: YPFSLPLLRIPTANMQCLSLRFL*TILSEC Trigger: GCACTCGCTCAAGATTGTGCACAGGAACCTCAAGCT...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACACACCAGCCAGGATCTTaGGGAAGAGATTCTTATCGT | + |
Preference number: 4 (lower is better) Translates to: RELGNCSLLPHPSQSYFTHQPGS*GRDSYR Trigger: ACGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGGGTGCTTCACCATCTTaGGGATTCCAATCTCGTTCT | + |
Preference number: 4 (lower is better) Translates to: YPFSLPLLRIPTANMQCLGASPS*GFQSRS Trigger: AGAACGAGATTGGAATCCTCAAGATGGTGAAGCACC...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | GAAACTGGTGAAGCTAGCGAAAGACAGAAAGCCACAAGGAATCCATGCAGGGGCTCTAGCTTAGCCAGGTaGAAGTCGCTGATGACAATC | + |
Preference number: 4 (lower is better) Translates to: ETGEASERQKATRNPCRGSSLAR*KSLMTI Trigger: GATTGTCATCAGCGACTTTCACCTGGCTAAGCTAGA...GCCCCTGCATGGATTCCTTGTGGCTTTCTGTCTTTCGCTAGCTTCACCAGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCATCTAGCTTAGCCAGGTaGAAGTCGCTGATGACAATC | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRASSLAR*KSLMTI Trigger: GATTGTCATCAGCGACTTTCACCTGGCTAAGCTAGA...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCACACCAGCCAGGATCTTaGGGAAGAGATTCTTATCGT | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRAHQPGS*GRDSYR Trigger: ACGATAAGAATCTCTTCCGCAAGATCCTGGCTGGTG...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR GCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCATGTAGCACTACGATCTaGAGAGGCTATGTCATCGCT | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRACSTTI*RGYVIA Trigger: AGCGATGACATAGCCTCTGCAGATCGTAGTGCTACA...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCGTCAGTCACTTCCGATaGCTGGTTATAGTTCTTCTT | + |
Preference number: 4 (lower is better) Translates to: SWGTVVYFLIPARATSHGVSHFR*LVIVLL Trigger: AAGAAGAACTATAACCAGCCATCGGAAGTGACTGAC...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR TCA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGGCTGATGACAATCTTTaGGTTCTTCAGCCTGTTGTA | + |
Preference number: 4 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQADDNL*VLQPVV Trigger: TACAACAGGCTGAAGAACTCAAAGATTGTCATCAGC...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CCA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAGTCAGTCACTTCCGATaGCTGGTTATAGTTCTTCTT | + |
Preference number: 4 (lower is better) Translates to: LPGSVGTQLAHQPSHTRAVSHFR*LVIVLL Trigger: AAGAAGAACTATAACCAGCCATCGGAAGTGACTGAC...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 90 bp | CCTCTAGGGCTGTGCTGTCCGGCTGGGCCACAGCCGGCTCAGGGGTaGCTGCTGCCTTTGCAGCTGGCAGGGCACTGCTTTGAGTGGCGG | + |
Preference number: 5 (lower is better) Translates to: PLGLCCPAGPQPAQG*LLPLQLAGHCFEWR Trigger: CCGCCACTCAAAGCAGTGCCCTGCCAGCTGCAAAGGCAGCAGCCACCCCTGAGCCGGCTGTGGCCCAGCCGGACAGCACAGCCCTAGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 90 bp | CGGCTGGGCCACAGCCGGCTCAGGGGTGGCTGCTGCCTTTGCAGCTaGCAGGGCACTGCTTTGAGTGGCGGGCACTGTGCTCTCTTCTGT | + |
Preference number: 5 (lower is better) Translates to: RLGHSRLRGGCCLCS*QGTALSGGHCALFC Trigger: ACAGAAGAGAGCACAGTGCCCGCCACTCAAAGCAGTGCCCTGCCAGCTGCAAAGGCAGCAGCCACCCCTGAGCCGGCTGTGGCCCAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 90 bp | GGAGTGGCAGCGTCTGAAGCAGACTGGGTCGCCGCTGTTCCAGACTaGTCTGGTGCCCGGAGCCGCTTCATGAGAGTGGTCACTCGGACA | + |
Preference number: 5 (lower is better) Translates to: GVAASEADWVAAVPD*SGARSRFMRVVTRT Trigger: TGTCCGAGTGACCACTCTCATGAAGCGGCTCCGGGCACCAGAGCAGTCTGGAACAGCGGCGACCCAGTCTGCTTCAGACGCTGCCACTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGGGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCT | + |
Preference number: 5 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLGDPLV*LHLHQP Trigger: AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACC...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS TCA 90 bp | GGGTCGCCGCTGTTCCAGACTGCTCTGGTGCCCGGAGCCGCTTCATaGGAGTGGTCACTCGGACAGCCTTCTTCCACTTGGCTCTGGCAA | + |
Preference number: 5 (lower is better) Translates to: GSPLFQTALVPGAAS*EWSLGQPSSTWLWQ Trigger: TTGCCAGAGCCAAGTGGAAGAAGGCTGTCCGAGTGACCACTCTCATGAAGCGGCTCCGGGCACCAGAGCAGTCTGGAACAGCGGCGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 90 bp | GCGAGTGCAAGTAGGCCACAGCCTCCAAGACCTGCCGCACCACGTTaGTCGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCAGGATCCAGT | + |
Preference number: 5 (lower is better) Translates to: ASASRPQPPRPAAPR*SCLAPSSSPGPGSS Trigger: ACTGGATCCTGGACCAGGGCTACTACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGTCTTGGAGGCTGTGGCCTACTTGCACTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 90 bp | TGGGCACATCCAGTAGCCTCTTCTCCTTTACTAGAGGGTGGAGCCTaGCCTGTGGCACCCTCTAGGGCTGTGCTGTCCGGCTGGGCCACA | + |
Preference number: 5 (lower is better) Translates to: WAHPVASSPLLEGGA*PVAPSRAVLSGWAT Trigger: TGTGGCCCAGCCGGACAGCACAGCCCTAGAGGGTGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGAGAAGAGGCTACTGGATGTGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCGGGTGGCTGCTGCCTTaGCAGCTGGCAGGGCACTGC | + |
Preference number: 5 (lower is better) Translates to: LLRASLRELGNCSLLPHPGWLLP*QLAGHC Trigger: GCAGTGCCCTGCCAGCTGCAAAGGCAGCAGCCACCC...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 90 bp | GGCTGGAGTGGCGCTGCCATCTGTGGCTGGTGTAGCACTACGATCTaGAGAGGCTATGTCATCGCTCTTGGCAGCACACCCAGCACCACC | + |
Preference number: 5 (lower is better) Translates to: GWSGAAICGWCSTTI*RGYVIALGSTPSTT Trigger: GGTGGTGCTGGGTGTGCTGCCAAGAGCGATGACATAGCCTCTGCAGATCGTAGTGCTACACCAGCCACAGATGGCAGCGCCACTCCAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGCCCGTTGTCTTGTCCTaGGCCCGGAAGATTTCACAG | + |
Preference number: 5 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLPVVLS*ARKISQ Trigger: CTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGG...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 90 bp | AGAAGCCGCGTTGCCGGAAATCCATTCGTGGGAGATGGCCTCTTCTaGGGTGATCCGCTGGTCTTGCTCCACCTCCATCAGCCTGGTGAC | + |
Preference number: 5 (lower is better) Translates to: RSRVAGNPFVGDGLF*GDPLVLLHLHQPGD Trigger: GTCACCAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCCCACGAATGGATTTCCGGCAACGCGGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 90 bp | CCAACAGTCTACAGGGCGACCGTACCGTTGCCGTCCTACCACTTCTaGTGCCAGATACTCCGGGGTTCCACAGGGCTCCTTGATAAGGCC | + |
Preference number: 5 (lower is better) Translates to: PTVYRATVPLPSYHF*CQILRGSTGLLDKA Trigger: GGCCTTATCAAGGAGCCCTGTGGAACCCCGGAGTATCTGGCACCAGAAGTGGTAGGACGGCAACGGTACGGTCGCCCTGTAGACTGTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR CAA 90 bp | CCAGCGTGGCTGCCTGTTCAGGCTGTGGTAGGGTCTGACCAAGGGCACCTGCTGTTACAGGTGTGCAGCTaGCCCGTTGTCTTGTCCTTG | + |
Preference number: 5 (lower is better) Translates to: PAWLPVQAVVGSDQGHLLLQVCS*PVVLSL Trigger: CAAGGACAAGACAACGGGCAAGCTGCACACCTGTAA...CAGCAGGTGCCCTTGGTCAGACCCTACCACAGCCTGAACAGGCAGCCACGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGGTTCCACAGGGCTCCTaGATAAGGCCATTCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRVPQGS*IRPFSS Trigger: GCTAGAGAATGGCCTTATCAAGGAGCCCTGTGGAAC...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCTGGCAGGGCACTGCTTaGAGTGGCGGGCACTGTGCT | + |
Preference number: 5 (lower is better) Translates to: LLRASLRELGNCSLLPHPWQGTA*SGGHCA Trigger: AGCACAGTGCCCGCCACTCAAAGCAGTGCCCTGCCA...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 90 bp | CCGGAAATCCATTCGTGGGAGATGGCCTCTTCTGCGGTGATCCGCTaGTCTTGCTCCACCTCCATCAGCCTGGTGACCAGGTCTTTGGCT | + |
Preference number: 5 (lower is better) Translates to: PEIHSWEMASSAVIR*SCSTSISLVTRSLA Trigger: AGCCAAAGACCTGGTCACCAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCCCACGAATGGATTTCCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CTGCTGAGAGCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCTGTGCAGCTTGCCCGTaGTCTTGTCCTTGGCCCGGA | + |
Preference number: 5 (lower is better) Translates to: LLRASLRELGNCSLLPHPCAACP*SCPWPG Trigger: TCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACA...GGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGCTCTCAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | TGGCCAGAGGCTTTGCAGGGTGACGTTTATTTGCCAGGTTCAGTAGGCACACAGACCTGCCGCACCACGTaGCTCGTGTCTCGCTCCGAG | + |
Preference number: 5 (lower is better) Translates to: WPEALQGDVYLPGSVGTQTCRTT*LVSRSE Trigger: CTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGT...CTGTGTGCCTACTGAACCTGGCAAATAAACGTCACCCTGCAAAGCCTCTGGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR CAA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGGGGTGGCTGCTGCCTTaGCAGCTGGCAGGGCACTGC | + |
Preference number: 5 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQGWLLP*QLAGHC Trigger: GCAGTGCCCTGCCAGCTGCAAAGGCAGCAGCCACCC...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | AGCCTCCAAGACCTGCCGCACCACGTTGCTCGTGTCTCGCTCCGAGTAGTAGCCTGTGCAGCTTGCCCGTaGTCTTGTCGTCTTGATGAC | + |
Preference number: 5 (lower is better) Translates to: SLQDLPHHVARVSLRVVACAACP*SCRLDD Trigger: GTCATCAAGACGACAAGACAACGGGCAAGCTGCACA...GGCTACTACTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGTCTTGGAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS GCA 90 bp | ACAGTCTACAGGGCGACCGTACCGTTGCCGTCCTACCACTTCTGGTaGCAGATACTCCGGGGTTCCACAGGGCTCCTTGATAAGGCCATT | + |
Preference number: 5 (lower is better) Translates to: TVYRATVPLPSYHFW*QILRGSTGLLDKAI Trigger: AATGGCCTTATCAAGGAGCCCTGTGGAACCCCGGAGTATCTGGCACCAGAAGTGGTAGGACGGCAACGGTACGGTCGCCCTGTAGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS-3UTR CAA 90 bp | ATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGCCCCACTGGGGGTGCTTCACCATCTaGAGGATTCCAATCTCGTTC | + |
Preference number: 5 (lower is better) Translates to: IHTGDKTALPWPPGMPHWGCFTI*RIPISF Trigger: GAACGAGATTGGAATCCTCAAGATGGTGAAGCACCC...CCAGTGGGGCATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | GCATCCCTCAGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCACCAGCTGCAGGATGTaGGGGTGCTTCACCATCTTG | + |
Preference number: 5 (lower is better) Translates to: ASLRELGNCSLLPHPSQSTSCRM*GCFTIL Trigger: CAAGATGGTGAAGCACCCCAACATCCTGCAGCTGGT...GCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCTGAGGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CGCTGCACTAAGAGCAGAAAATCTGCTGCTGTGAAAAGCATGCTCCCAACGCAGACCTGCCGCACCACGTaGCTCGTGTCTCGCTCCGAG | + |
Preference number: 5 (lower is better) Translates to: RCTKSRKSAAVKSMLPTQTCRTT*LVSRSE Trigger: CTCGGAGCGAGACACGAGCAACGTGGTGCGGCAGGT...CTGCGTTGGGAGCATGCTTTTCACAGCAGCAGATTTTCTGCTCTTAGTGCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | ACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGCTGTACAGCCTTCTTCCACTaGGCTCTGGCAAAGTTCTTC | + |
Preference number: 5 (lower is better) Translates to: TMECRARARTSVAACSGCTAFFH*ALAKFF Trigger: GAAGAACTTTGCCAGAGCCAAGTGGAAGAAGGCTGT...ACAGCCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CTCACATACATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGGCTATGTCATCGCTCTaGGCAGCACACCCAGCACCA | + |
Preference number: 5 (lower is better) Translates to: LTYIHTGDKTALPWPPGMAMSSL*AAHPAP Trigger: TGGTGCTGGGTGTGCTGCCAAGAGCGATGACATAGC...CATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCAGGGCACTGCTTaGAGTGGCGGGCACTGTGCT | + |
Preference number: 5 (lower is better) Translates to: RELGNCSLLPHPSQSYFTWQGTA*SGGHCA Trigger: AGCACAGTGCCCGCCACTCAAAGCAGTGCCCTGCCA...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGTGCAGCTTGCCCGTaGTCTTGTCCTTGGCCCGGA | + |
Preference number: 5 (lower is better) Translates to: RELGNCSLLPHPSQSYFTCAACP*SCPWPG Trigger: TCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACA...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCAGGATCCAGTCAAACACCTCCCTATTCCAATCTCGTTCTaGGCTGCCTTCCGCACCTTG | + |
Preference number: 5 (lower is better) Translates to: RVSLRVVALVQDPVKHLPIPISF*AAFRTL Trigger: CAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAAT...AGGGAGGTGTTTGACTGGATCCTGGACCAGGGCTACTACTCGGAGCGAGACACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR CAA 90 bp | GCTCGTGTCTCGCTCCGAGTAGTAGCCCTGGTCCAGGATCCAGTCAAACACCTCTTACAGGTGTGCAGCTaGCCCGTTGTCTTGTCGTCT | + |
Preference number: 5 (lower is better) Translates to: ARVSLRVVALVQDPVKHLLQVCS*PVVLSS Trigger: AGACGACAAGACAACGGGCAAGCTGCACACCTGTAA...GAGGTGTTTGACTGGATCCTGGACCAGGGCTACTACTCGGAGCGAGACACGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS GCA 90 bp | TTCCGCACCTTGCGGCCATCACGCTTCTGGAACTTCTTACAGGTGTaGAGCTTGCCCGTTGTCTTGTCCTTGGCCCGGAAGATTTCACAG | + |
Preference number: 5 (lower is better) Translates to: FRTLRPSRFWNFLQV*SLPVVLSLARKISQ Trigger: CTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 90 bp | ATCTCGTTCTTGGCTGCCTTCCGCACCTTGCGGCCATCACGCTTCTaGAACTTCTTACAGGTGTGCAGCTTGCCCGTTGTCTTGTCCTTG | + |
Preference number: 5 (lower is better) Translates to: ISFLAAFRTLRPSRF*NFLQVCSLPVVLSL Trigger: CAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 90 bp | ATCTCGTTCTTGGCTGCCTTCCGCACCTTGCGGCCATCACGCTTCTaGAACTTCTTACAGGTGTGCAGCTTGCCCGTTGTCTTGTCGTCT | + |
Preference number: 5 (lower is better) Translates to: ISFLAAFRTLRPSRF*NFLQVCSLPVVLSS Trigger: AGACGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR CAA 90 bp | GACCACCATGGAGTGCCGAGCAAGGGCAAGGACCAGCGTGGCTGCCTGTTCAGGAAGATGAAGTATTCCTaGCGGGTCACAAACACATCT | + |
Preference number: 5 (lower is better) Translates to: DHHGVPSKGKDQRGCLFRKMKYS*RVTNTS Trigger: AGATGTGTTTGTGACCCGCAAGGAATACTTCATCTT...CCTGAACAGGCAGCCACGCTGGTCCTTGCCCTTGCTCGGCACTCCATGGTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAGGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCT | + |
Preference number: 5 (lower is better) Translates to: LPGSVGTQLAHQPSHTRAGDPLV*LHLHQP Trigger: AGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACC...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 90 bp | CCTTGCGGCCATCACGCTTCTGGAACTTCTTACAGGTGTGCAGCTTaGCCGTTGTCTTGTCCTTGGCCCGGAAGATTTCACAGAACTCCT | + |
Preference number: 5 (lower is better) Translates to: PCGHHASGTSYRCAA*PLSCPWPGRFHRTP Trigger: AGGAGTTCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACACCCGTTGTCTTGTCCTaGGCCCGGAAGATTTCACAG | + |
Preference number: 5 (lower is better) Translates to: RELGNCSLLPHPSQSYFTPVVLS*ARKISQ Trigger: CTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGG...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCAGCTTGCCCGTTGTCTaGTCCTTGGCCCGGAAGATT | + |
Preference number: 5 (lower is better) Translates to: SWGTVVYFLIPARATSHGSLPVV*SLARKI Trigger: AATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCT...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CTCACATACATCCACACAGGAGACAAGACTGCTCTCCCATGGCCCCCAGGCATGACAGCCTTCTTCCACTaGGCTCTGGCAAAGTTCTTC | + |
Preference number: 5 (lower is better) Translates to: LTYIHTGDKTALPWPPGMTAFFH*ALAKFF Trigger: GAAGAACTTTGCCAGAGCCAAGTGGAAGAAGGCTGT...CATGCCTGGGGGCCATGGGAGAGCAGTCTTGTCTCCTGTGTGGATGTATGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGGCTATGTCATCGCTCTaGGCAGCACACCCAGCACCA | + |
Preference number: 5 (lower is better) Translates to: YPFSLPLLRIPTANMQCLAMSSL*AAHPAP Trigger: TGGTGCTGGGTGTGCTGCCAAGAGCGATGACATAGC...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 90 bp | GTTGGGGTGCTTCACCATCTTGAGGATTCCAATCTCGTTCTTGGCTaGCTTCCGCACCTTGCGGCCATCACGCTTCTGGAACTTCTTACA | + |
Preference number: 5 (lower is better) Translates to: VGVLHHLEDSNLVLG*LPHLAAITLLELLT Trigger: TGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAATCCTCAAGATGGTGAAGCACCCCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAAGCTTGCCCGTTGTCTaGTCCTTGGCCCGGAAGATT | + |
Preference number: 5 (lower is better) Translates to: LPGSVGTQLAHQPSHTRASLPVV*SLARKI Trigger: AATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCT...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | CATCCTCTCTTGCACACTCCTAGAGCAGCCCAAACACCACAGGTACACACCTTCATTCCAATCTCGTTCTaGGCTGCCTTCCGCACCTTG | + |
Preference number: 5 (lower is better) Translates to: HPLLHTPRAAQTPQVHTFIPISF*AAFRTL Trigger: CAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAAT...GAAGGTGTGTACCTGTGGTGTTTGGGCTGCTCTAGGAGTGTGCAAGAGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACAATTCCAATCTCGTTCTaGGCTGCCTTCCGCACCTTG | + |
Preference number: 5 (lower is better) Translates to: RELGNCSLLPHPSQSYFTIPISF*AAFRTL Trigger: CAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAAT...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | TACCCATTCTCTCTCCCACTTCTGAGGATCCCCACAGCTAACATGCAATGCCTGACCAGCTGCAGGATGTaGGGGTGCTTCACCATCTTG | + |
Preference number: 5 (lower is better) Translates to: YPFSLPLLRIPTANMQCLTSCRM*GCFTIL Trigger: CAAGATGGTGAAGCACCCCAACATCCTGCAGCTGGT...CAGGCATTGCATGTTAGCTGTGGGGATCCTCAGAAGTGGGAGAGAGAATGGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS TCA 90 bp | TGGCTCTGGCAAAGTTCTTCTCAATCTGGGCACAGACGCCATCCTTaGTGTTCTTATCAGAAGCCGCGTTGCCGGAAATCCATTCGTGGG | + |
Preference number: 5 (lower is better) Translates to: WLWQSSSQSGHRRHP*CSYQKPRCRKSIRG Trigger: CCCACGAATGGATTTCCGGCAACGCGGCTTCTGATAAGAACATCAAGGATGGCGTCTGTGCCCAGATTGAGAAGAACTTTGCCAGAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCATTACAGGTGTGCAGCTaGCCCGTTGTCTTGTCCTTG | + |
Preference number: 5 (lower is better) Translates to: LPGSVGTQLAHQPSHTRALQVCS*PVVLSL Trigger: CAAGGACAAGACAACGGGCAAGCTGCACACCTGTAA...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | AGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACATGGCGGGTGCTTCACCATCTaGAGGATTCCAATCTCGTTC | + |
Preference number: 5 (lower is better) Translates to: SWGTVVYFLIPARATSHGGCFTI*RIPISF Trigger: GAACGAGATTGGAATCCTCAAGATGGTGAAGCACCC...GCCATGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | TTGCCAGGTTCAGTAGGCACACAGTTAGCCCACCAACCTTCACATACCAGAGCAGTTCCACAGGGCTCCTaGATAAGGCCATTCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: LPGSVGTQLAHQPSHTRAVPQGS*IRPFSS Trigger: GCTAGAGAATGGCCTTATCAAGGAGCCCTGTGGAAC...TGCTCTGGTATGTGAAGGTTGGTGGGCTAACTGTGTGCCTACTGAACCTGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | AGGGAGCTGGGGAACTGTAGTCTACTTCCTCATCCCAGCCAGAGCTACTTCACACTCAGTCTTGATGACTaGTCCCAGGTCATATCTGTC | + |
Preference number: 5 (lower is better) Translates to: RELGNCSLLPHPSQSYFTLSLDD*SQVISV Trigger: GACAGATATGACCTGGGACAAGTCATCAAGACTGAG...TGTGAAGTAGCTCTGGCTGGGATGAGGAAGTAGACTACAGTTCCCCAGCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS-3UTR CAA 90 bp | GAAACTGGTGAAGCTAGCGAAAGACAGAAAGCCACAAGGAATCCATGCAGGGGCGCACAGACGCCATCCTaGATGTTCTTATCAGAAGCC | + |
Preference number: 5 (lower is better) Translates to: ETGEASERQKATRNPCRGAQTPS*MFLSEA Trigger: GGCTTCTGATAAGAACATCAAGGATGGCGTCTGTGC...GCCCCTGCATGGATTCCTTGTGGCTTTCTGTCTTTCGCTAGCTTCACCAGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 90 bp | AGAAAGATGAAGTATTCCTTGCGGGTCACAAACACATCTACCAGCTaGAGGATGTTGGGGTGCTTCACCATCTTGAGGATTCCAATCTCG | + |
Preference number: 5 (lower is better) Translates to: RKMKYSLRVTNTSTS*RMLGCFTILRIPIS Trigger: CGAGATTGGAATCCTCAAGATGGTGAAGCACCCCAACATCCTGCAGCTGGTAGATGTGTTTGTGACCCGCAAGGAATACTTCATCTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 90 bp | CGTCTTGATGACTTGTCCCAGGTCATATCTGTCAGTCACTTCCGATaGCTGGTTATAGTTCTTCTTGTCACCCAGAGTCACACACCCAAA | + |
Preference number: 5 (lower is better) Translates to: RLDDLSQVISVSHFR*LVIVLLVTQSHTPK Trigger: TTTGGGTGTGTGACTCTGGGTGACAAGAAGAACTATAACCAGCCATCGGAAGTGACTGACAGATATGACCTGGGACAAGTCATCAAGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS-3UTR CAA 90 bp | TCCAGAAAGATGAAGTATTCCTTGCGGGTCACAAACACATCTACCAGCTGCAGGTGTCGTCTTGATGACTaGTCCCAGGTCATATCTGTC | + |
Preference number: 5 (lower is better) Translates to: SRKMKYSLRVTNTSTSCRCRLDD*SQVISV Trigger: GACAGATATGACCTGGGACAAGTCATCAAGACGACA...CCTGCAGCTGGTAGATGTGTTTGTGACCCGCAAGGAATACTTCATCTTTCTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS CCA 90 bp | AGTCTTGATGACTTGTCCCAGGTCATATCTGTCAGTCACTTCCGATaGCTGGTTATAGTTCTTCTTGTCACCCAGAGTCACACACCCAAA | + |
Preference number: 5 (lower is better) Translates to: SLDDLSQVISVSHFR*LVIVLLVTQSHTPK Trigger: TTTGGGTGTGTGACTCTGGGTGACAAGAAGAACTATAACCAGCCATCGGAAGTGACTGACAGATATGACCTGGGACAAGTCATCAAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 ENSMUST00000195219.2 |
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CDS CCA 72 bp | TGGCCTGTGGCACCCTCTAGGGCTGTGCTGTCCGGCTaGGCCACAGCCGGCTCAGGGGTGGCTGCTGCCTTT | + |
Preference number: 6 (lower is better) Translates to: WPVAPSRAVLSG*ATAGSGVAAAF Trigger: AAAGGCAGCAGCCACCCCTGAGCCGGCTGTGGCCCAGCCGGACAGCACAGCCCTAGAGGGTGCCACAGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 72 bp | CCAGCAGCCCCAGGAGTGGCAGCGTCTGAAGCAGACTaGGTCGCCGCTGTTCCAGACTGCTCTGGTGCCCGG | + |
Preference number: 6 (lower is better) Translates to: PAAPGVAASEAD*VAAVPDCSGAR Trigger: CCGGGCACCAGAGCAGTCTGGAACAGCGGCGACCCAGTCTGCTTCAGACGCTGCCACTCCTGGGGCTGCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS TCA 72 bp | GATGGCCCCACCAGCAGCCCCAGGAGTGGCAGCGTCTaGAGCAGACTGGGTCGCCGCTGTTCCAGACTGCTC | + |
Preference number: 6 (lower is better) Translates to: DGPTSSPRSGSV*SRLGRRCSRLL Trigger: GAGCAGTCTGGAACAGCGGCGACCCAGTCTGCTTCAGACGCTGCCACTCCTGGGGCTGCTGGTGGGGCCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 72 bp | CACAGCCGGCTCAGGGGTGGCTGCTGCCTTTGCAGCTaGCAGGGCACTGCTTTGAGTGGCGGGCACTGTGCT | + |
Preference number: 6 (lower is better) Translates to: HSRLRGGCCLCS*QGTALSGGHCA Trigger: AGCACAGTGCCCGCCACTCAAAGCAGTGCCCTGCCAGCTGCAAAGGCAGCAGCCACCCCTGAGCCGGCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | AGCAGACTGGGTCGCCGCTGTTCCAGACTGCTCTGGTaGCCGGAGCCGCTTCATGAGAGTGGTCACTCGGAC | + |
Preference number: 6 (lower is better) Translates to: SRLGRRCSRLLW*PEPLHESGHSD Trigger: GTCCGAGTGACCACTCTCATGAAGCGGCTCCGGGCACCAGAGCAGTCTGGAACAGCGGCGACCCAGTCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | GCGTCTGAAGCAGACTGGGTCGCCGCTGTTCCAGACTaGTCTGGTGCCCGGAGCCGCTTCATGAGAGTGGTC | + |
Preference number: 6 (lower is better) Translates to: ASEADWVAAVPD*SGARSRFMRVV Trigger: GACCACTCTCATGAAGCGGCTCCGGGCACCAGAGCAGTCTGGAACAGCGGCGACCCAGTCTGCTTCAGACGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 72 bp | CCAGTAGCCTCTTCTCCTTTACTAGAGGGTGGAGCCTaGCCTGTGGCACCCTCTAGGGCTGTGCTGTCCGGC | + |
Preference number: 6 (lower is better) Translates to: PVASSPLLEGGA*PVAPSRAVLSG Trigger: GCCGGACAGCACAGCCCTAGAGGGTGCCACAGGCCAGGCTCCACCCTCTAGTAAAGGAGAAGAGGCTACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | AGGGCGACCGTACCGTTGCCGTCCTACCACTTCTGGTaGCAGATACTCCGGGGTTCCACAGGGCTCCTTGAT | + |
Preference number: 6 (lower is better) Translates to: RATVPLPSYHFW*QILRGSTGLLD Trigger: ATCAAGGAGCCCTGTGGAACCCCGGAGTATCTGGCACCAGAAGTGGTAGGACGGCAACGGTACGGTCGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS GCA 72 bp | CCAATGGCCCAACAGTCTACAGGGCGACCGTACCGTTaGCGTCCTACCACTTCTGGTGCCAGATACTCCGGG | + |
Preference number: 6 (lower is better) Translates to: PMAQQSTGRPYR*RPTTSGARYSG Trigger: CCCGGAGTATCTGGCACCAGAAGTGGTAGGACGGCAACGGTACGGTCGCCCTGTAGACTGTTGGGCCATTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS CCA 72 bp | TACAGGGCGACCGTACCGTTGCCGTCCTACCACTTCTaGTGCCAGATACTCCGGGGTTCCACAGGGCTCCTT | + |
Preference number: 6 (lower is better) Translates to: YRATVPLPSYHF*CQILRGSTGLL Trigger: AAGGAGCCCTGTGGAACCCCGGAGTATCTGGCACCAGAAGTGGTAGGACGGCAACGGTACGGTCGCCCTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS CCA 72 bp | CATTCGTGGGAGATGGCCTCTTCTGCGGTGATCCGCTaGTCTTGCTCCACCTCCATCAGCCTGGTGACCAGG | + |
Preference number: 6 (lower is better) Translates to: HSWEMASSAVIR*SCSTSISLVTR Trigger: CCTGGTCACCAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCCCACGAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | GCCAATGGCCCAACAGTCTACAGGGCGACCGTACCGTaGCCGTCCTACCACTTCTGGTGCCAGATACTCCGG | + |
Preference number: 6 (lower is better) Translates to: ANGPTVYRATVP*PSYHFWCQILR Trigger: CCGGAGTATCTGGCACCAGAAGTGGTAGGACGGCAACGGTACGGTCGCCCTGTAGACTGTTGGGCCATTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS TCA 72 bp | CGGAAATCCATTCGTGGGAGATGGCCTCTTCTGCGGTaGTCCGCTGGTCTTGCTCCACCTCCATCAGCCTGG | + |
Preference number: 6 (lower is better) Translates to: RKSIRGRWPLLR*SAGLAPPPSAW Trigger: CCAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCCCACGAATGGATTTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | TGGGAGATGGCCTCTTCTGCGGTGATCCGCTGGTCTTaGTCCACCTCCATCAGCCTGGTGACCAGGTCTTTG | + |
Preference number: 6 (lower is better) Translates to: WEMASSAVIRWS*STSISLVTRSL Trigger: CAAAGACCTGGTCACCAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 90 bp | CATGATGACGCCAATGGCCCAACAGTCTACAGGGCGACCGTACCGTaGCCGTCCTACCACTTCTGGTGCCAGATACTCCGGGGTTCCACA | + |
Preference number: 6 (lower is better) Translates to: HDDANGPTVYRATVP*PSYHFWCQILRGST Trigger: TGTGGAACCCCGGAGTATCTGGCACCAGAAGTGGTAGGACGGCAACGGTACGGTCGCCCTGTAGACTGTTGGGCCATTGGCGTCATCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035700.14 |
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CDS CAA 90 bp | GTGGCTGGTGTAGCACTACGATCTGCAGAGGCTATGTCATCGCTCTaGGCAGCACACCCAGCACCACCCTCTGTGGCTGCAGTAGCACTG | + |
Preference number: 6 (lower is better) Translates to: VAGVALRSAEAMSSL*AAHPAPPSVAAVAL Trigger: CAGTGCTACTGCAGCCACAGAGGGTGGTGCTGGGTGTGCTGCCAAGAGCGATGACATAGCCTCTGCAGATCGTAGTGCTACACCAGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 90 bp | AATCCATTCGTGGGAGATGGCCTCTTCTGCGGTGATCCGCTGGTCTaGCTCCACCTCCATCAGCCTGGTGACCAGGTCTTTGGCTGCTTG | + |
Preference number: 6 (lower is better) Translates to: NPFVGDGLFCGDPLV*LHLHQPGDQVFGCL Trigger: CAAGCAGCCAAAGACCTGGTCACCAGGCTGATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCCCACGAATGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | GTTGCCGGAAATCCATTCGTGGGAGATGGCCTCTTCTaGGGTGATCCGCTGGTCTTGCTCCACCTCCATCAG | + |
Preference number: 6 (lower is better) Translates to: VAGNPFVGDGLF*GDPLVLLHLHQ Trigger: CTGATGGAGGTGGAGCAAGACCAGCGGATCACCGCAGAAGAGGCCATCTCCCACGAATGGATTTCCGGCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 72 bp | TTGGCTGCCTTCCGCACCTTGCGGCCATCACGCTTCTaGAACTTCTTACAGGTGTGCAGCTTGCCCGTTGTC | + |
Preference number: 6 (lower is better) Translates to: LAAFRTLRPSRF*NFLQVCSLPVV Trigger: GACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035700.14 ENSMUST00000193533.6 ENSMUST00000194206.2 |
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CDS CAA 72 bp | GTAGCACTACGATCTGCAGAGGCTATGTCATCGCTCTaGGCAGCACACCCAGCACCACCCTCTGTGGCTGCA | + |
Preference number: 6 (lower is better) Translates to: VALRSAEAMSSL*AAHPAPPSVAA Trigger: TGCAGCCACAGAGGGTGGTGCTGGGTGTGCTGCCAAGAGCGATGACATAGCCTCTGCAGATCGTAGTGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | TTGCGGCCATCACGCTTCTGGAACTTCTTACAGGTGTaGAGCTTGCCCGTTGTCTTGTCCTTGGCCCGGAAG | + |
Preference number: 6 (lower is better) Translates to: LRPSRFWNFLQV*SLPVVLSLARK Trigger: CTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | GGGTGCTTCACCATCTTGAGGATTCCAATCTCGTTCTaGGCTGCCTTCCGCACCTTGCGGCCATCACGCTTC | + |
Preference number: 6 (lower is better) Translates to: GCFTILRIPISF*AAFRTLRPSRF Trigger: GAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAATCCTCAAGATGGTGAAGCACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 90 bp | ACCTTGCGGCCATCACGCTTCTGGAACTTCTTACAGGTGTGCAGCTaGCCCGTTGTCTTGTCCTTGGCCCGGAAGATTTCACAGAACTCC | + |
Preference number: 6 (lower is better) Translates to: TLRPSRFWNFLQVCS*PVVLSLARKISQNS Trigger: GGAGTTCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 90 bp | AGGATGTTGGGGTGCTTCACCATCTTGAGGATTCCAATCTCGTTCTaGGCTGCCTTCCGCACCTTGCGGCCATCACGCTTCTGGAACTTC | + |
Preference number: 6 (lower is better) Translates to: RMLGCFTILRIPISF*AAFRTLRPSRFWNF Trigger: GAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAATCCTCAAGATGGTGAAGCACCCCAACATCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | GGATTCCAATCTCGTTCTTGGCTGCCTTCCGCACCTTaGGGCCATCACGCTTCTGGAACTTCTTACAGGTGT | + |
Preference number: 6 (lower is better) Translates to: GFQSRSWLPSAP*GHHASGTSYRC Trigger: ACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035700.14 ENSMUST00000193533.6 ENSMUST00000194206.2 |
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CDS GCA 72 bp | CTTCACCATCTTGAGGATTCCAATCTCGTTCTTGGCTaGCTTCCGCACCTTGCGGCCATCACGCTTCTGGAA | + |
Preference number: 6 (lower is better) Translates to: LHHLEDSNLVLG*LPHLAAITLLE Trigger: TTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAATCCTCAAGATGGTGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | AGGATTCCAATCTCGTTCTTGGCTGCCTTCCGCACCTaGCGGCCATCACGCTTCTGGAACTTCTTACAGGTG | + |
Preference number: 6 (lower is better) Translates to: RIPISFLAAFRT*RPSRFWNFLQV Trigger: CACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAATCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035700.14 ENSMUST00000193533.6 ENSMUST00000194206.2 |
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CDS CAA 90 bp | GGCCATCACGCTTCTGGAACTTCTTACAGGTGTGCAGCTTGCCCGTaGTCTTGTCCTTGGCCCGGAAGATTTCACAGAACTCCTCAGTCT | + |
Preference number: 6 (lower is better) Translates to: GHHASGTSYRCAACP*SCPWPGRFHRTPQS Trigger: AGACTGAGGAGTTCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 90 bp | ACCATCTTGAGGATTCCAATCTCGTTCTTGGCTGCCTTCCGCACCTaGCGGCCATCACGCTTCTGGAACTTCTTACAGGTGTGCAGCTTG | + |
Preference number: 6 (lower is better) Translates to: TILRIPISFLAAFRT*RPSRFWNFLQVCSL Trigger: CAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGGCCGCAAGGTGCGGAAGGCAGCCAAGAACGAGATTGGAATCCTCAAGATGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035700.14 ENSMUST00000193533.6 ENSMUST00000194206.2 |
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CDS GCA 72 bp | CATCACGCTTCTGGAACTTCTTACAGGTGTGCAGCTTaGCCGTTGTCTTGTCCTTGGCCCGGAAGATTTCAC | + |
Preference number: 6 (lower is better) Translates to: HHASGTSYRCAA*PLSCPWPGRFH Trigger: GTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | CCATCACGCTTCTGGAACTTCTTACAGGTGTGCAGCTaGCCCGTTGTCTTGTCCTTGGCCCGGAAGATTTCA | + |
Preference number: 6 (lower is better) Translates to: PSRFWNFLQVCS*PVVLSLARKIS Trigger: TGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | CAGACGCCATCCTTGATGTTCTTATCAGAAGCCGCGTaGCCGGAAATCCATTCGTGGGAGATGGCCTCTTCT | + |
Preference number: 6 (lower is better) Translates to: QTPSLMFLSEAA*PEIHSWEMASS Trigger: AGAAGAGGCCATCTCCCACGAATGGATTTCCGGCAACGCGGCTTCTGATAAGAACATCAAGGATGGCGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 90 bp | TCACGCTTCTGGAACTTCTTACAGGTGTGCAGCTTGCCCGTTGTCTaGTCCTTGGCCCGGAAGATTTCACAGAACTCCTCAGTCTTGATG | + |
Preference number: 6 (lower is better) Translates to: SRFWNFLQVCSLPVV*SLARKISQNSSVLM Trigger: CATCAAGACTGAGGAGTTCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 90 bp | TTGGCTCTGGCAAAGTTCTTCTCAATCTGGGCACAGACGCCATCCTaGATGTTCTTATCAGAAGCCGCGTTGCCGGAAATCCATTCGTGG | + |
Preference number: 6 (lower is better) Translates to: LALAKFFSIWAQTPS*MFLSEAALPEIHSW Trigger: CCACGAATGGATTTCCGGCAACGCGGCTTCTGATAAGAACATCAAGGATGGCGTCTGTGCCCAGATTGAGAAGAACTTTGCCAGAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | CATCACGCTTCTGGAACTTCTTACAGGTGTGCAGCTTaGCCGTTGTCTTGTCGTCTTGATGACTTGTCCCAG | + |
Preference number: 6 (lower is better) Translates to: HHASGTSYRCAA*PLSCRLDDLSQ Trigger: CTGGGACAAGTCATCAAGACGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGCGTGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS CAA 72 bp | TTCTTACAGGTGTGCAGCTTGCCCGTTGTCTTGTCCTaGGCCCGGAAGATTTCACAGAACTCCTCAGTCTTG | + |
Preference number: 6 (lower is better) Translates to: FLQVCSLPVVLS*ARKISQNSSVL Trigger: CAAGACTGAGGAGTTCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | TGGAACTTCTTACAGGTGTGCAGCTTGCCCGTTGTCTaGTCCTTGGCCCGGAAGATTTCACAGAACTCCTCA | + |
Preference number: 6 (lower is better) Translates to: WNFLQVCSLPVV*SLARKISQNSS Trigger: TGAGGAGTTCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | GCTTCTGGAACTTCTTACAGGTGTGCAGCTTGCCCGTaGTCTTGTCCTTGGCCCGGAAGATTTCACAGAACT | + |
Preference number: 6 (lower is better) Translates to: ASGTSYRCAACP*SCPWPGRFHRT Trigger: AGTTCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | TGTGCAGCTTGCCCGTTGTCTTGTCGTCTTGATGACTaGTCCCAGGTCATATCTGTCAGTCACTTCCGATGG | + |
Preference number: 6 (lower is better) Translates to: CAACPLSCRLDD*SQVISVSHFRW Trigger: CCATCGGAAGTGACTGACAGATATGACCTGGGACAAGTCATCAAGACGACAAGACAACGGGCAAGCTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS TCA 72 bp | CAAAGTTCTTCTCAATCTGGGCACAGACGCCATCCTTaGTGTTCTTATCAGAAGCCGCGTTGCCGGAAATCC | + |
Preference number: 6 (lower is better) Translates to: QSSSQSGHRRHP*CSYQKPRCRKS Trigger: GGATTTCCGGCAACGCGGCTTCTGATAAGAACATCAAGGATGGCGTCTGTGCCCAGATTGAGAAGAACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | GCAAAGTTCTTCTCAATCTGGGCACAGACGCCATCCTaGATGTTCTTATCAGAAGCCGCGTTGCCGGAAATC | + |
Preference number: 6 (lower is better) Translates to: AKFFSIWAQTPS*MFLSEAALPEI Trigger: GATTTCCGGCAACGCGGCTTCTGATAAGAACATCAAGGATGGCGTCTGTGCCCAGATTGAGAAGAACTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CAA 72 bp | GCTTCTGGAACTTCTTACAGGTGTGCAGCTTGCCCGTaGTCTTGTCGTCTTGATGACTTGTCCCAGGTCATA | + |
Preference number: 6 (lower is better) Translates to: ASGTSYRCAACP*SCRLDDLSQVI Trigger: TATGACCTGGGACAAGTCATCAAGACGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000193533.6 |
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CDS CAA 90 bp | TTCTGGAACTTCTTACAGGTGTGCAGCTTGCCCGTTGTCTTGTCCTaGGCCCGGAAGATTTCACAGAACTCCTCAGTCTTGATGACTTGT | + |
Preference number: 6 (lower is better) Translates to: FWNFLQVCSLPVVLS*ARKISQNSSVLMTC Trigger: ACAAGTCATCAAGACTGAGGAGTTCTGTGAAATCTTCCGGGCCAAGGACAAGACAACGGGCAAGCTGCACACCTGTAAGAAGTTCCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS GCA 72 bp | AAGTATTCCTTGCGGGTCACAAACACATCTACCAGCTaGAGGATGTTGGGGTGCTTCACCATCTTGAGGATT | + |
Preference number: 6 (lower is better) Translates to: KYSLRVTNTSTS*RMLGCFTILRI Trigger: AATCCTCAAGATGGTGAAGCACCCCAACATCCTGCAGCTGGTAGATGTGTTTGTGACCCGCAAGGAATACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |
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CDS CCA 72 bp | GACTTGTCCCAGGTCATATCTGTCAGTCACTTCCGATaGCTGGTTATAGTTCTTCTTGTCACCCAGAGTCAC | + |
Preference number: 6 (lower is better) Translates to: DLSQVISVSHFR*LVIVLLVTQSH Trigger: GTGACTCTGGGTGACAAGAAGAACTATAACCAGCCATCGGAAGTGACTGACAGATATGACCTGGGACAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035700.14 ENSMUST00000193533.6 ENSMUST00000194206.2 ENSMUST00000195219.2 |
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CDS TCA 72 bp | GGCTCCTTGATAAGGCCATTCTCTAGCTTAGCCAGGTaGAAGTCGCTGATGACAATCTTTGAGTTCTTCAGC | + |
Preference number: 6 (lower is better) Translates to: GSLIRPFSSLAR*KSLMTIFEFFS Trigger: GCTGAAGAACTCAAAGATTGTCATCAGCGACTTTCACCTGGCTAAGCTAGAGAATGGCCTTATCAAGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035700.14 ENSMUST00000194206.2 |