Pregenerated sensors for CAMKMT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000071037Ensembl transcript IDs: ENSMUST00000095188.7
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGGGAGAGCTGCCGAGGGCCGGAGTAATGGGCGGAGTCCCAAGATaGGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGC | + |
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Preference number: 1 (lower is better) Translates to: VGELPRAGVMGGVPR*GMFESGWSPESQRR Trigger: GCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCTTGGGACTCCGCCCATTACTCCGGCCCTCGGCAGCTCTCCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| 3UTR CCA 90 bp | AAGGTTTGGTACGGAAGAGCAACAAGCTTCCTTAAAAAGGACTGGTaGGAGCGAGCGCGCTGCGGAGGGTGGGAGAGCTGCCGAGGGCCG | + |
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Preference number: 1 (lower is better) Translates to: KVWYGRATSFLKKDW*ERARCGGWESCRGP Trigger: CGGCCCTCGGCAGCTCTCCCACCCTCCGCAGCGCGCTCGCTCCCACCAGTCCTTTTTAAGGAAGCTTGTTGCTCTTCCGTACCAAACCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGTTTGGTACGGAAGAGCAACAAGCTTCCTTAAAAAGGACTGGTGGGAGCAAGTGGGTGGAGCCCTaGGTCCCAGAGGCGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: QRFGTEEQQASLKRTGGSKWVEP*VPEALW Trigger: CCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTT...GCTCCCACCAGTCCTTTTTAAGGAAGCTTGTTGCTCTTCCGTACCAAACCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| 3UTR CCA 72 bp | TACGGAAGAGCAACAAGCTTCCTTAAAAAGGACTGGTaGGAGCGAGCGCGCTGCGGAGGGTGGGAGAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: YGRATSFLKKDW*ERARCGGWESC Trigger: GCAGCTCTCCCACCCTCCGCAGCGCGCTCGCTCCCACCAGTCCTTTTTAAGGAAGCTTGTTGCTCTTCCGTA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| 3UTR CCA 72 bp | TGGTACGGAAGAGCAACAAGCTTCCTTAAAAAGGACTaGTGGGAGCGAGCGCGCTGCGGAGGGTGGGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: WYGRATSFLKKD*WERARCGGWES Trigger: GCTCTCCCACCCTCCGCAGCGCGCTCGCTCCCACCAGTCCTTTTTAAGGAAGCTTGTTGCTCTTCCGTACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| 3UTR TCA 72 bp | CCCAAGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTaGGTCCCAGAGGCGCTGTGGCGGAGTTCTCATATA | + |
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Preference number: 3 (lower is better) Translates to: PKMRNVRKWVEP*VPEALWRSSHI Trigger: TATATGAGAACTCCGCCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR GCA 90 bp | GGAGTCCCAAGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGACGCTTGCCCGCCTCTaGCTCAGTCTCTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: GVPRCGMFESGWSPESQRTLARL*LSLCSP Trigger: GGGGCTGCAGAGACTGAGGCAGAGGCGGGCAAGCGT...CCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCTTGGGACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | ACGGAAGAGCAACAAGCTTCCTTAAAAAGGACTGGTGGGAGCGAGCGCGCTGCGGAGACCAGCGAGCCCTaGCTGGCACTGCCCATCGCG | + |
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Preference number: 4 (lower is better) Translates to: TEEQQASLKRTGGSERAAETSEP*LALPIA Trigger: CGCGATGGGCAGTGCCAGCCAGGGCTCGCTGGTCTC...CGCAGCGCGCTCGCTCCCACCAGTCCTTTTTAAGGAAGCTTGTTGCTCTTCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | GATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTGTGGCGCAGGACCTCCTCGGATaGCCAGATGCAAACATTTCC | + |
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Preference number: 4 (lower is better) Translates to: DAECSKVGGALSPRGAVAQDLLG*PDANIS Trigger: GGAAATGTTTGCATCTGGCCATCCGAGGAGGTCCTG...CGCCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | GCTTCCTTAAAAAGGACTGGTGGGAGCGAGCGCGCTGCGGAGGGTGGGAGAGCTAGTATTCCCTCGGCGTaGGGCAAATACCACCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: ASLKRTGGSERAAEGGRASIPSA*GKYHRF Trigger: AAAGCGGTGGTATTTGCCCCACGCCGAGGGAATACT...AGCTCTCCCACCCTCCGCAGCGCGCTCGCTCCCACCAGTCCTTTTTAAGGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | GATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTGTGGCGGCTTTCCCTGTGGGCTaGAGTAATCTCTTTATGGCA | + |
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Preference number: 4 (lower is better) Translates to: DAECSKVGGALSPRGAVAAFPVG*SNLFMA Trigger: TGCCATAAAGAGATTACTCCAGCCCACAGGGAAAGC...CGCCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR GCA 90 bp | AGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTGTGGCCCTCGGATGGCCAGATaGAAACATTTCCTGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: RCGMFESGWSPESQRRCGPRMAR*KHFLCC Trigger: ACAACACAGGAAATGTTTGCATCTGGCCATCCGAGG...GCCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | CCAAGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTGTAAGATGCTTGTGTACTaGACCCACACACCAGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRCGMFESGWSPESQRRCKMLVY*THTPAS Trigger: AGAGGCTGGTGTGTGGGTCCAGTACACAAGCATCTT...ACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | ACGGAAGAGCAACAAGCTTCCTTAAAAAGGACTGGTGGGAGCGAGCGCGCTGCGAGGCTGGCTCTGTACTaGTCCAGAAACAGGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: TEEQQASLKRTGGSERAARLALY*SRNRQS Trigger: TGACTGCCTGTTTCTGGACCAGTACAGAGCCAGCCT...CGCAGCGCGCTCGCTCCCACCAGTCCTTTTTAAGGAAGCTTGTTGCTCTTCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | TCCCAAGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTTGGCATCAACAAGGCTaGCTCTGTACTGGTCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SQDAECSKVGGALSPRGAWHQQG*LCTGPE Trigger: TTCTGGACCAGTACAGAGCCAGCCTTGTTGATGCCA...AGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCTTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR TCA 90 bp | AGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTGTGGCTGCTGTCCACATTTCTaGTGGCCTTTTCATTCCCAT | + |
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Preference number: 4 (lower is better) Translates to: RCGMFESGWSPESQRRCGCCPHF*WPFHSH Trigger: ATGGGAATGAAAAGGCCATCAGAAATGTGGACAGCA...GCCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR GCA 90 bp | GCCCTGAGTCCCAGAGGCGCTGTGGCGGAGTTCTCATATAGTGTGGAAATCTTTCAGCCAAGCATGTCATaGCACCCCCTAGCTCACACA | + |
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Preference number: 4 (lower is better) Translates to: ALSPRGAVAEFSYSVEIFQPSMS*HPLAHT Trigger: TGTGTGAGCTAGGGGGTGGCATGACATGCTTGGCTG...AAAGATTTCCACACTATATGAGAACTCCGCCACAGCGCCTCTGGGACTCAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR GCA 90 bp | GCCCTGAGTCCCAGAGGCGCTGTGGCGGAGTTCTCATATAGTGTGGAAATCTTTTCATCCAACTGTTTCTaGTTCAGAACCTGTCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ALSPRGAVAEFSYSVEIFSSNCF*FRTCRR Trigger: TCTGCGACAGGTTCTGAAGCAGAAACAGTTGGATGA...AAAGATTTCCACACTATATGAGAACTCCGCCACAGCGCCTCTGGGACTCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR TCA 90 bp | AGACAGGCTGCTGACACAGAAAAACACACAAAGGTTTGGTACGGAAGAGCAACAGATTGCAAAACTGGTTaGAAGTATTCCCTCGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: RQAADTEKHTKVWYGRATDCKTG*KYSLGV Trigger: CACGCCGAGGGAATACTTTCAACCAGTTTTGCAATC...TGTTGCTCTTCCGTACCAAACCTTTGTGTGTTTTTCTGTGTCAGCAGCCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR TCA 90 bp | CAAAGGTTTGGTACGGAAGAGCAACAAGCTTCCTTAAAAAGGACTGGTGGGAGCAAATGTCCTTCCAGTTaGGAGACGTCTGTCTCATTA | + |
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Preference number: 4 (lower is better) Translates to: QRFGTEEQQASLKRTGGSKCPSS*ETSVSL Trigger: TAATGAGACAGACGTCTCTCAACTGGAAGGACATTT...GCTCCCACCAGTCCTTTTTAAGGAAGCTTGTTGCTCTTCCGTACCAAACCTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | AGACAGGCTGCTGACACAGAAAAACACACAAAGGTTTGGTACGGAAGAGCAACAGGAGTAATCTCTTTATaGCATCAACAAGGCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RQAADTEKHTKVWYGRATGVISL*HQQGWL Trigger: GAGCCAGCCTTGTTGATGCCATAAAGAGATTACTCC...TGTTGCTCTTCCGTACCAAACCTTTGTGTGTTTTTCTGTGTCAGCAGCCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | CAAAGGTTTGGTACGGAAGAGCAACAAGCTTCCTTAAAAAGGACTGGTGGGAGCCGGAGATGCTGTATTTaGGATAAAAGATGCTTGTGT | + |
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Preference number: 4 (lower is better) Translates to: QRFGTEEQQASLKRTGGSRRCCI*DKRCLC Trigger: ACACAAGCATCTTTTATCCCAAATACAGCATCTCCG...GCTCCCACCAGTCCTTTTTAAGGAAGCTTGTTGCTCTTCCGTACCAAACCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CCA 90 bp | GACAGGCTGCTGACACAGAAAAACACACAAAGGTTTGGTACGGAAGAGCAACAAAGTGGAAGTTTGAAATaGGCTCATCGTAATTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: DRLLTQKNTQRFGTEEQQSGSLK*AHRNFH Trigger: ATGAAAATTACGATGAGCCCATTTCAAACTTCCACT...TTGTTGCTCTTCCGTACCAAACCTTTGTGTGTTTTTCTGTGTCAGCAGCCTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR GCA 90 bp | AATTCTGATCTAAGACAGGCTGCTGACACAGAAAAACACACAAAGGTTTGGTACTATGCCTTACGGAGATaGTGTATTTGGGATAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: NSDLRQAADTEKHTKVWYYALRR*CIWDKR Trigger: TCTTTTATCCCAAATACAGCATCTCCGTAAGGCATA...GTACCAAACCTTTGTGTGTTTTTCTGTGTCAGCAGCCTGTCTTAGATCAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CCA 90 bp | AGCTGCCACCGGACGGCCCCCTTGGGCGCCGAGACCAGCGAGCCCTaGCTGGCACTGCCCATCGCGGGACGCTTGCCCGCCTCTGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: SCHRTAPLGAETSEP*LALPIAGRLPASAS Trigger: TGAGGCAGAGGCGGGCAAGCGTCCCGCGATGGGCAGTGCCAGCCAGGGCTCGCTGGTCTCGGCGCCCAAGGGGGCCGTCCGGTGGCAGCT 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CCA 90 bp | TCTGCTTCAGAACCTGTCGCAGAAGCTGCCACCGGACGGCCCCCTTaGGCGCCGAGACCAGCGAGCCCTGGCTGGCACTGCCCATCGCGG | + |
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Preference number: 5 (lower is better) Translates to: SASEPVAEAATGRPP*APRPASPGWHCPSR Trigger: CCGCGATGGGCAGTGCCAGCCAGGGCTCGCTGGTCTCGGCGCCCAAGGGGGCCGTCCGGTGGCAGCTTCTGCGACAGGTTCTGAAGCAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CAA 90 bp | AGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTGTGGCCACCGGACGGCCCCCTaGGGCGCCGAGACCAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: RCGMFESGWSPESQRRCGHRTAP*GAETSE Trigger: CTCGCTGGTCTCGGCGCCCAAGGGGGCCGTCCGGTG...GCCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CAA 90 bp | GATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTGTGGCGTGGGATAAAAGATGCTaGTGTACTGGACCCACACAC | + |
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Preference number: 5 (lower is better) Translates to: DAECSKVGGALSPRGAVAWDKRC*CTGPTH Trigger: GTGTGTGGGTCCAGTACACAAGCATCTTTTATCCCA...CGCCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CCA 90 bp | GGGCAAATACCACCGCTTTCCCTGTGGGCTGGAGTAATCTCTTTATaGCATCAACAAGGCTGGCTCTGTACTGGTCCAGAAACAGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: GQIPPLSLWAGVISL*HQQGWLCTGPETGS Trigger: ACTGCCTGTTTCTGGACCAGTACAGAGCCAGCCTTGTTGATGCCATAAAGAGATTACTCCAGCCCACAGGGAAAGCGGTGGTATTTGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CAA 90 bp | AGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGCGCTGTGGCGTTAGCAGAACTTCTTaGACATCTGCAGAAATAGCA | + |
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Preference number: 5 (lower is better) Translates to: RCGMFESGWSPESQRRCGVSRTS*TSAEIA Trigger: TGCTATTTCTGCAGATGTCAAAGAAGTTCTGCTAAC...GCCACAGCGCCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CAA 90 bp | GGAGTCCCAAGATGCGGAATGTTCGAAAGTGGGTGGAGCCCTGAGTCCCAGAGGAAAATGTCCTTCCAGTaGAGAGACGTCTGTCTCATT | + |
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Preference number: 5 (lower is better) Translates to: GVPRCGMFESGWSPESQRKMSFQ*RDVCLI Trigger: AATGAGACAGACGTCTCTCAACTGGAAGGACATTTT...CCTCTGGGACTCAGGGCTCCACCCACTTTCGAACATTCCGCATCTTGGGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CAA 90 bp | GCCCTGAGTCCCAGAGGCGCTGTGGCGGAGTTCTCATATAGTGTGGAAATCTTTGCTTTTTCAGCTAGATaGCAAAACTGGTTGAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: ALSPRGAVAEFSYSVEIFAFSAR*QNWLKV Trigger: TACTTTCAACCAGTTTTGCAATCTAGCTGAAAAAGC...AAAGATTTCCACACTATATGAGAACTCCGCCACAGCGCCTCTGGGACTCAGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS TCA 90 bp | AACAGGCAGTCAGCACACATAACAATGTCAAAATGTCCTTCCAGTTaGGAGACGTCTGTCTCATTATCCCATCGTAAAACGCGGCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: NRQSAHITMSKCPSS*ETSVSLSHRKTRLD Trigger: ATCAAGCCGCGTTTTACGATGGGATAATGAGACAGACGTCTCTCAACTGGAAGGACATTTTGACATTGTTATGTGTGCTGACTGCCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS GCA 90 bp | ATCCACTATTATGCCTTACGGAGATGCTGTATTTGGGATAAAAGATaGTTGTGTACTGGACCCACACACCAGCCTCTTTTTCAGTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: IHYYALRRCCIWDKR*LCTGPTHQPLFQFP Trigger: AGGGAACTGAAAAAGAGGCTGGTGTGTGGGTCCAGTACACAAGCATCTTTTATCCCAAATACAGCATCTCCGTAAGGCATAATAGTGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CAA 90 bp | AGACAGGCTGCTGACACAGAAAAACACACAAAGGTTTGGTACGGAAGAGCAACAACTTGGAGTGGAAGTTaGAAATGGGCTCATCGTAAT | + |
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Preference number: 5 (lower is better) Translates to: RQAADTEKHTKVWYGRATTWSGS*KWAHRN Trigger: ATTACGATGAGCCCATTTCAAACTTCCACTCCAAGT...TGTTGCTCTTCCGTACCAAACCTTTGTGTGTTTTTCTGTGTCAGCAGCCTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS-3UTR CAA 90 bp | AATTCTGATCTAAGACAGGCTGCTGACACAGAAAAACACACAAAGGTTTGGTACGTAATTTTCATGTCTTaGGAGAGAGAAACCAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: NSDLRQAADTEKHTKVWYVIFMS*ERETSF Trigger: AAAGCTGGTTTCTCTCTCCAAAGACATGAAAATTAC...GTACCAAACCTTTGTGTGTTTTTCTGTGTCAGCAGCCTGTCTTAGATCAGAATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS GCA 72 bp | GCGAGCCCTGGCTGGCACTGCCCATCGCGGGACGCTTaGCCGCCTCTGCCTCAGTCTCTGCAGCCCCAGCGG | + |
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Preference number: 6 (lower is better) Translates to: ASPGWHCPSRDA*PPLPQSLQPQR Trigger: CCGCTGGGGCTGCAGAGACTGAGGCAGAGGCGGGCAAGCGTCCCGCGATGGGCAGTGCCAGCCAGGGCTCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CCA 72 bp | GAACCTGTCGCAGAAGCTGCCACCGGACGGCCCCCTTaGGCGCCGAGACCAGCGAGCCCTGGCTGGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: EPVAEAATGRPP*APRPASPGWHC Trigger: GCAGTGCCAGCCAGGGCTCGCTGGTCTCGGCGCCCAAGGGGGCCGTCCGGTGGCAGCTTCTGCGACAGGTTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CAA 72 bp | AGCGAGCCCTGGCTGGCACTGCCCATCGCGGGACGCTaGCCCGCCTCTGCCTCAGTCTCTGCAGCCCCAGCG | + |
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Preference number: 6 (lower is better) Translates to: SEPWLALPIAGR*PASASVSAAPA Trigger: CGCTGGGGCTGCAGAGACTGAGGCAGAGGCGGGCAAGCGTCCCGCGATGGGCAGTGCCAGCCAGGGCTCGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS GCA 72 bp | TCCAACTGTTTCTGCTTCAGAACCTGTCGCAGAAGCTaGCACCGGACGGCCCCCTTGGGCGCCGAGACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SNCFCFRTCRRS*HRTAPLGAETS Trigger: GCTGGTCTCGGCGCCCAAGGGGGCCGTCCGGTGGCAGCTTCTGCGACAGGTTCTGAAGCAGAAACAGTTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CCA 72 bp | TGGGCTGGAGTAATCTCTTTATGGCATCAACAAGGCTaGCTCTGTACTGGTCCAGAAACAGGCAGTCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: WAGVISLWHQQG*LCTGPETGSQH Trigger: GTGCTGACTGCCTGTTTCTGGACCAGTACAGAGCCAGCCTTGTTGATGCCATAAAGAGATTACTCCAGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CAA 72 bp | GCCTTACGGAGATGCTGTATTTGGGATAAAAGATGCTaGTGTACTGGACCCACACACCAGCCTCTTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ALRRCCIWDKRC*CTGPTHQPLFQ Trigger: CTGAAAAAGAGGCTGGTGTGTGGGTCCAGTACACAAGCATCTTTTATCCCAAATACAGCATCTCCGTAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CCA 72 bp | AATCTCTTTATGGCATCAACAAGGCTGGCTCTGTACTaGTCCAGAAACAGGCAGTCAGCACACATAACAATG | + |
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Preference number: 6 (lower is better) Translates to: NLFMASTRLALY*SRNRQSAHITM Trigger: CATTGTTATGTGTGCTGACTGCCTGTTTCTGGACCAGTACAGAGCCAGCCTTGTTGATGCCATAAAGAGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CAA 72 bp | ATGGCCTTTTCATTCCCATCAGTTAGCAGAACTTCTTaGACATCTGCAGAAATAGCAACCATGAGCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: MAFSFPSVSRTS*TSAEIATMSPA Trigger: GGCTGGGCTCATGGTTGCTATTTCTGCAGATGTCAAAGAAGTTCTGCTAACTGATGGGAATGAAAAGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CAA 72 bp | TGTCTTTGGAGAGAGAAACCAGCTTTTTCAGCTAGATaGCAAAACTGGTTGAAAGTATTCCCTCGGCGTGGG | + |
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Preference number: 6 (lower is better) Translates to: CLWREKPAFSAR*QNWLKVFPRRG Trigger: CCCACGCCGAGGGAATACTTTCAACCAGTTTTGCAATCTAGCTGAAAAAGCTGGTTTCTCTCTCCAAAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS GCA 72 bp | TATGCCTTACGGAGATGCTGTATTTGGGATAAAAGATaGTTGTGTACTGGACCCACACACCAGCCTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: YALRRCCIWDKR*LCTGPTHQPLF Trigger: AAAAAGAGGCTGGTGTGTGGGTCCAGTACACAAGCATCTTTTATCCCAAATACAGCATCTCCGTAAGGCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CCA 72 bp | AGGATCCACTATTATGCCTTACGGAGATGCTGTATTTaGGATAAAAGATGCTTGTGTACTGGACCCACACAC | + |
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Preference number: 6 (lower is better) Translates to: RIHYYALRRCCI*DKRCLCTGPTH Trigger: GTGTGTGGGTCCAGTACACAAGCATCTTTTATCCCAAATACAGCATCTCCGTAAGGCATAATAGTGGATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CAA 90 bp | CACTATTATGCCTTACGGAGATGCTGTATTTGGGATAAAAGATGCTaGTGTACTGGACCCACACACCAGCCTCTTTTTCAGTTCCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: HYYALRRCCIWDKRC*CTGPTHQPLFQFPF Trigger: AAAAGGGAACTGAAAAAGAGGCTGGTGTGTGGGTCCAGTACACAAGCATCTTTTATCCCAAATACAGCATCTCCGTAAGGCATAATAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CAA 90 bp | ACGCGGCTTGATATTTTCGGAGTCTTAAACACACCAGTCTTCTTATaGCATGCGATGATGCTGTCCACATTTCTGATGGCCTTTTCATTC | + |
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Preference number: 6 (lower is better) Translates to: TRLDIFGVLNTPVFL*HAMMLSTFLMAFSF Trigger: GAATGAAAAGGCCATCAGAAATGTGGACAGCATCATCGCATGCAATAAGAAGACTGGTGTGTTTAAGACTCCGAAAATATCAAGCCGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS GCA 72 bp | TTTCGGAGTCTTAAACACACCAGTCTTCTTATTGCATaGGATGATGCTGTCCACATTTCTGATGGCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: FRSLKHTSLLIA*DDAVHISDGLF Trigger: GAAAAGGCCATCAGAAATGTGGACAGCATCATCGCATGCAATAAGAAGACTGGTGTGTTTAAGACTCCGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS CAA 72 bp | GATATTTTCGGAGTCTTAAACACACCAGTCTTCTTATaGCATGCGATGATGCTGTCCACATTTCTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: DIFGVLNTPVFL*HAMMLSTFLMA Trigger: GGCCATCAGAAATGTGGACAGCATCATCGCATGCAATAAGAAGACTGGTGTGTTTAAGACTCCGAAAATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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| CDS TCA 72 bp | TCAGCACACATAACAATGTCAAAATGTCCTTCCAGTTaGGAGACGTCTGTCTCATTATCCCATCGTAAAACG | + |
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Preference number: 6 (lower is better) Translates to: SAHITMSKCPSS*ETSVSLSHRKT Trigger: CGTTTTACGATGGGATAATGAGACAGACGTCTCTCAACTGGAAGGACATTTTGACATTGTTATGTGTGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095188.7 |
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