Pregenerated sensors for CAMKK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029471Ensembl transcript IDs: ENSMUST00000111668.8, ENSMUST00000196742.2, ENSMUST00000197373.2, ENSMUST00000198029.5, ENSMUST00000198257.5, ENSMUST00000199179.5, ENSMUST00000199599.2, ENSMUST00000200109.5
Found 375 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATaGGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTCCATCACCTC | + |
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Preference number: 1 (lower is better) Translates to: KRRVQQPRAGPHSQA*EVRWSTQLLRLHHL Trigger: GAGGTGATGGAGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR GCA 90 bp | CACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGCAGGGTaGAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: HVLGFRRTCCYGNAG*SSPVQGHTARHARS Trigger: TGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR CCA 90 bp | AGCCATGGATGCGGCTTCACCAGACGGATCGGGAGCTTAAAGGAGTaGGCTCAGCCCCAGGCTTCCTTCCAGCCGAGTCTGCTTCGTGGG | + |
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Preference number: 1 (lower is better) Translates to: SHGCGFTRRIGSLKE*AQPQASFQPSLLRG Trigger: CCCACGAAGCAGACTCGGCTGGAAGGAAGCCTGGGGCTGAGCCCACTCCTTTAAGCTCCCGATCCGTCTGGTGAAGCCGCATCCATGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR TCA 90 bp | GGGCCTGGCCTCCGCACAGGCCAGAAGTCGGTTGTCTGGGCCCCATaGCTGACTGGCAAGACAGCCACTACCAAAGCACTGGAAACCAGT | + |
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Preference number: 1 (lower is better) Translates to: GPGLRTGQKSVVWAP*LTGKTATTKALETS Trigger: ACTGGTTTCCAGTGCTTTGGTAGTGGCTGTCTTGCCAGTCAGTCATGGGGCCCAGACAACCGACTTCTGGCCTGTGCGGAGGCCAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR GCA 90 bp | GACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATaGTGCTATGGAAACGCAGGGTGCAGCAGCCCCGTGCAGGGCCAC | + |
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Preference number: 1 (lower is better) Translates to: DDSQGSTHVLGFRRT*CYGNAGCSSPVQGH Trigger: GTGGCCCTGCACGGGGCTGCTGCACCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR GCA 90 bp | CTAGCACCTTGGGAGCCAATGGAGGCTGTGGTTGGCAATGTAAAGTaGGCCCCCTGGAGGATGGGCGAGAGTTGCAGGCCTAACCTGGTG | + |
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Preference number: 1 (lower is better) Translates to: LAPWEPMEAVVGNVK*APWRMGESCRPNLV Trigger: CACCAGGTTAGGCCTGCAACTCTCGCCCATCCTCCAGGGGGCGCACTTTACATTGCCAACCACAGCCTCCATTGGCTCCCAAGGTGCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR CCA 90 bp | ACCCACAGCAGGAAGCTGAACACTGCTCTCAGGAGAAGCCCTGTGTaGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGCCATCACACAC | + |
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Preference number: 1 (lower is better) Translates to: THSRKLNTALRRSPV*IRCLPGVPLLAITH Trigger: GTGTGTGATGGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCTGAGAGCAGTGTTCAGCTTCCTGCTGTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
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| 3UTR GCA 90 bp | GACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTaGTATGGAAACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACA | + |
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Preference number: 1 (lower is better) Translates to: DSQGSTHVLGFRRTC*YGNAGCSSPVQGHT Trigger: TGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR TCA 90 bp | CATGGAAGTTCCCTGCAGCTACTGAGGGCTAGCCCTGTCTTTCCATaGTCCTGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCACA | + |
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Preference number: 1 (lower is better) Translates to: HGSSLQLLRASPVFP*SWKAPRHGVCTWVT Trigger: TGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGGCTAGCCCTCAGTAGCTGCAGGGAACTTCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR TCA 90 bp | GCCACTGGCCTTGTCACTCAGGGCTACTGTCCCCACTCTCAACCATaGTCTGTGTGCTCTACCCAAACAGGGGACTGGGTCCCTACACAG | + |
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Preference number: 1 (lower is better) Translates to: ATGLVTQGYCPHSQP*SVCSTQTGDWVPTQ Trigger: CTGTGTAGGGACCCAGTCCCCTGTTTGGGTAGAGCACACAGATCATGGTTGAGAGTGGGGACAGTAGCCCTGAGTGACAAGGCCAGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR CCA 90 bp | CCAACAATCTTCCCTAGCACCTTGGGAGCCAATGGAGGCTGTGGTTaGCAATGTAAAGTGCGCCCCCTGGAGGATGGGCGAGAGTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PTIFPSTLGANGGCG*QCKVRPLEDGRELQ Trigger: CTGCAACTCTCGCCCATCCTCCAGGGGGCGCACTTTACATTGCCAACCACAGCCTCCATTGGCTCCCAAGGTGCTAGGGAAGATTGTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR CCA 90 bp | GTTATCCTGCGCCTAGAAAGGTTCAAGGATAAGGATTCTGTCCCCTaGAAAGGCCAGACCCTGGGAGGTGGCCTATGCAGCCCCAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: VILRLERFKDKDSVP*KGQTLGGGLCSPKG Trigger: TCCCTTGGGGCTGCATAGGCCACCTCCCAGGGTCTGGCCTTTCCAGGGGACAGAATCCTTATCCTTGAACCTTTCTAGGCGCAGGATAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR TCA 90 bp | TCAGATCCTGGAAGTAGAAGCGGGCCTGGTCTTCGGACAGTGGCTTaGGGGTGGGCACTTCCATTACAGGCCCTTGGTTCACCAACTCAA | + |
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Preference number: 1 (lower is better) Translates to: SDPGSRSGPGLRTVA*GWALPLQALGSPTQ Trigger: TTGAGTTGGTGAACCAAGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGACCAGGCCCGCTTCTACTTCCAGGATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR GCA 90 bp | TGTAGAAAACTGGACGGGCATCAGTGGATGCTAGGAAATGAGACGTaGATAGACACAGCTCAGAGGAGGAGGAAGGTTCCCTCCGGGGCG | + |
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Preference number: 1 (lower is better) Translates to: CRKLDGHQWMLGNET*IDTAQRRRKVPSGA Trigger: CGCCCCGGAGGGAACCTTCCTCCTCCTCTGAGCTGTGTCTATGCACGTCTCATTTCCTAGCATCCACTGATGCCCGTCCAGTTTTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR GCA 90 bp | GTGTGTTCAGCCTCCAGACAGACCTCTACCACCACAGCTGAGGAATaGTCGCATTCAGGGGTGCAAAGTACCCCTCGAGCATTTCAACTG | + |
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Preference number: 1 (lower is better) Translates to: VCSASRQTSTTTAEE*SHSGVQSTPRAFQL Trigger: CAGTTGAAATGCTCGAGGGGTACTTTGCACCCCTGAATGCGAGCATTCCTCAGCTGTGGTGGTAGAGGTCTGTCTGGAGGCTGAACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR CCA 90 bp | CACAGAGCTGGAGAAGACAGAAACCAACAATCTTCCCTAGCACCTTaGGAGCCAATGGAGGCTGTGGTTGGCAATGTAAAGTGCGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: HRAGEDRNQQSSLAP*EPMEAVVGNVKCAP Trigger: GGGGGCGCACTTTACATTGCCAACCACAGCCTCCATTGGCTCCCAAGGTGCTAGGGAAGATTGTTGGTTTCTGTCTTCTCCAGCTCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR CCA 90 bp | TTTGATCAGATCCTGGAAGTAGAAGCGGGCCTGGTCTTCGGACAGTaGCTTGAGGGTGGGCACTTCCATTACAGGCCCTTGGTTCACCAA | + |
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Preference number: 1 (lower is better) Translates to: FDQILEVEAGLVFGQ*LEGGHFHYRPLVHQ Trigger: TTGGTGAACCAAGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGACCAGGCCCGCTTCTACTTCCAGGATCTGATCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR CCA 90 bp | AGGCCTTTGCTCAGAGAAAGGCTTCACTTCTCAGTAACACAGAGATaGGAACTACAGGTCACCCGGGAACAAGGTGGGGATGAGGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: RPLLRERLHFSVTQR*ELQVTREQGGDEEA Trigger: GGCCTCCTCATCCCCACCTTGTTCCCGGGTGACCTGTAGTTCCCATCTCTGTGTTACTGAGAAGTGAAGCCTTTCTCTGAGCAAAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR CCA 90 bp | CTGCCTTGCTTCCTGCTCGCCGAACAGAAAACCAGCATTAAGACTTaGAGAATTGATGGCGGAGCCCTGACCGACTCCCACCTTTGCATG | + |
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Preference number: 1 (lower is better) Translates to: LPCFLLAEQKTSIKT*RIDGGALTDSHLCM Trigger: CATGCAAAGGTGGGAGTCGGTCAGGGCTCCGCCATCAATTCTCCAAGTCTTAATGCTGGTTTTCTGTTCGGCGAGCAGGAAGCAAGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR TCA 90 bp | AACAGAAAACCAGCATTAAGACTTGGAGAATTGATGGCGGAGCCCTaGCCGACTCCCACCTTTGCATGCCTCTGCTCCCACATTCCCACG | + |
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Preference number: 1 (lower is better) Translates to: NRKPALRLGELMAEP*PTPTFACLCSHIPT Trigger: CGTGGGAATGTGGGAGCAGAGGCATGCAAAGGTGGGAGTCGGTCAGGGCTCCGCCATCAATTCTCCAAGTCTTAATGCTGGTTTTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR TCA 90 bp | GCACAGAGGGACACCCATCCTGGAAGCTCCAACCTTTGGAACTTGTaGACCTCTCCGGAGTTCTGGCTAGTCAGAGACTTGGAAACATCT | + |
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Preference number: 1 (lower is better) Translates to: AQRDTHPGSSNLWNL*TSPEFWLVRDLETS Trigger: AGATGTTTCCAAGTCTCTGACTAGCCAGAACTCCGGAGAGGTTCACAAGTTCCAAAGGTTGGAGCTTCCAGGATGGGTGTCCCTCTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR GCA 90 bp | GGAAAAGTGACAGGAAGTCCTTGGTCACACAGACCCTCCCCACACTaGAGTCTGTACCTGGATCCTAACTGCTTATGTGACAGCAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GKVTGSPWSHRPSPH*SLYLDPNCLCDSRD Trigger: ATCCCTGCTGTCACATAAGCAGTTAGGATCCAGGTACAGACTGCAGTGTGGGGAGGGTCTGTGTGACCAAGGACTTCCTGTCACTTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR TCA 90 bp | AAGTCCTCATTACAAATAAATGACATGGAAGTTCCCTGCAGCTACTaGGGGCTAGCCCTGTCTTTCCATGATCCTGGAAGGCGCCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: KSSLQINDMEVPCSY*GLALSFHDPGRRPG Trigger: GCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGGCTAGCCCTCAGTAGCTGCAGGGAACTTCCATGTCATTTATTTGTAATGAGGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR CCA 90 bp | TCCATTACAGGCCCTTGGTTCACCAACTCAAACACCATGTACAGATaGTCCTCATTAGGGTCATCCAGGACCTCTACCAGCTTCACCACG | + |
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Preference number: 1 (lower is better) Translates to: SITGPWFTNSNTMYR*SSLGSSRTSTSFTT Trigger: CGTGGTGAAGCTGGTAGAGGTCCTGGATGACCCTAATGAGGACCATCTGTACATGGTGTTTGAGTTGGTGAACCAAGGGCCTGTAATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR GCA 90 bp | AACAAAGAAGCAAGAACAGGTTCGTTCACGGTCCAGTTGAGAGGCTaGCTTGGTTTCAGCAGGCCTTTGCTCAGAGAAAGGCTTCACTTC | + |
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Preference number: 1 (lower is better) Translates to: NKEARTGSFTVQLRG*LGFSRPLLRERLHF Trigger: GAAGTGAAGCCTTTCTCTGAGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCTGTTCTTGCTTCTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR CCA 90 bp | CGAGCTGGGACCAAGCTGTATGACCTGTTGGCTTTAACCATAAGGTaGCTATTGCAAACTAACGGAATGCCATCTGTGGCCAGAAAGGGT | + |
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Preference number: 1 (lower is better) Translates to: RAGTKLYDLLALTIR*LLQTNGMPSVARKG Trigger: ACCCTTTCTGGCCACAGATGGCATTCCGTTAGTTTGCAATAGCCACCTTATGGTTAAAGCCAACAGGTCATACAGCTTGGTCCCAGCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR TCA 90 bp | CAGACACATCTTCCCAAACAGCAGCAGGTGCTTTCTTATATCACATaGGCTCCTAAGGCACAGGTGGCCGATGAACAGCCTCGTATAATG | + |
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Preference number: 1 (lower is better) Translates to: QTHLPKQQQVLSYIT*APKAQVADEQPRIM Trigger: CATTATACGAGGCTGTTCATCGGCCACCTGTGCCTTAGGAGCTCATGTGATATAAGAAAGCACCTGCTGCTGTTTGGGAAGATGTGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR TCA 90 bp | GAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAATGGCCAGAAGTaGAAGGCCACATACTGTATCACCCACTTACAAAAACCCGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: ERKRERERERENGQK*KATYCITHLQKPGR Trigger: TCTGCCGGGTTTTTGTAAGTGGGTGATACAGTATGTGGCCTTTCACTTCTGGCCATTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR GCA 90 bp | ATTGCCGACAATCTTAAGACATCCTGTCGAGAGAAACCACGGCATTaGCCAGAGGGGTTGTGTAAACACAAGAATTCTGCAGAGCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: IADNLKTSCREKPRH*PEGLCKHKNSAELC Trigger: ACAGAGCTCTGCAGAATTCTTGTGTTTACACAACCCCTCTGGGCAATGCCGTGGTTTCTCTCGACAGGATGTCTTAAGATTGTCGGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR GCA 90 bp | TGGGAATTACATTATCTGGTCTTTTTAATTTCAGAGAAGGATGTCTaGCCTCAAAGCTGCCGACTGGTGCGGACAGGCCCTACAAATTCC | + |
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Preference number: 1 (lower is better) Translates to: WELHYLVFLISEKDV*PQSCRLVRTGPTNS Trigger: GGAATTTGTAGGGCCTGTCCGCACCAGTCGGCAGCTTTGAGGGCAGACATCCTTCTCTGAAATTAAAAAGACCAGATAATGTAATTCCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR CCA 90 bp | TGTCCCTGGGTCATCACACCCAAACTTCAACCAAACTTCCAATATTaGTTGAAAGTCAAAAAGGTTCCTATTGGCTCTCTAGGTTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: CPWVITPKLQPNFQY*LKVKKVPIGSLGFW Trigger: CCAGAAACCTAGAGAGCCAATAGGAACCTTTTTGACTTTCAACCAATATTGGAAGTTTGGTTGAAGTTTGGGTGTGATGACCCAGGGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR CCA 90 bp | TGGCCCACAGGGAAACTGATGTTTCATTGTACCGACCAGACATTCTaGAAAAGGAAAGAAAGTTTACAGTCTCTAGAATACACAGGCAAT | + |
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Preference number: 1 (lower is better) Translates to: WPTGKLMFHCTDQTF*KRKESLQSLEYTGN Trigger: ATTGCCTGTGTATTCTAGAGACTGTAAACTTTCTTTCCTTTTCCAGAATGTCTGGTCGGTACAATGAAACATCAGTTTCCCTGTGGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCTGCAGTGGAGGCATaGGTGGTGGGGAGCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: AAAPCRATQPGMRGQVVHAAVEA*VVGSQG Trigger: CCCCTGGCTCCCCACCACGCATGCCTCCACTGCAGC...GTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACCTGCCACCACCTACCTaGGACCTCACGCTCCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHLPPPT*DLTLPH Trigger: GTGAGGGAGCGTGAGGTCCCAGGTAGGTGGTGGCAG...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | CAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCAAAGTCGACGACATGGAGACCCTCCCCACACTaGAGTCTGTACCTGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: QLLTPAGPASQRPKSTTWRPSPH*SLYLDP Trigger: AGGATCCAGGTACAGACTGCAGTGTGGGGAGGGTCT...CCATGTCGTCGACTTTGGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTCGGACAGTGGCTTGAGGGTGGGCACTTCCATTACAGGCCCTTGGTTCACCCTGGATGCAGCCCCCTaGGGCTGGGCGAGCTCCTCG | + |
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Preference number: 2 (lower is better) Translates to: SSDSGLRVGTSITGPWFTLDAAP*GWASSS Trigger: CGAGGAGCTCGCCCAGCCCCAGGGGGCTGCATCCAG...GGTGAACCAAGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGGTGCAGCAGCCCCGTaGAGGGCCACACAGCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: CPKMHVGFGLQLLTPAGPGAAAP*RATQPG Trigger: GCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACC...CGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR GCA 90 bp | TGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCACTCCCACCTTTGCATaGCTCTGCTCCCACATTCCC | + |
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Preference number: 2 (lower is better) Translates to: CWFRFATPHTRRSGQPAATPTFA*LCSHIP Trigger: GGGAATGTGGGAGCAGAGGCATGCAAAGGTGGGAGT...GGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | AGGTTCGTTCACGGTCCAGTTGAGAGGCTGCCTTGGTTTCAGCAGGCCTTTGCTGCTGCAGTGGAGGCATaGGTGGTGGGGAGCCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: RFVHGPVERLPWFQQAFAAAVEA*VVGSQG Trigger: CCCCTGGCTCCCCACCACGCATGCCTCCACTGCAGC...AGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | ATCCTGGAAGTAGAAGCGGGCCTGGTCTTCGGACAGTGGCTTGAGGGTGGGCACATCTCCTGGTACACTTaGTCGATGGGGCCCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: ILEVEAGLVFGQWLEGGHISWYT*SMGPLG Trigger: GCCCAGGGGCCCCATCGAGCAAGTGTACCAGGAGAT...GTGCCCACCCTCAAGCCACTGTCCGAAGACCAGGCCCGCTTCTACTTCCAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR-3UTR CCA 90 bp | AGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTGGAGGCATGCGTGGTaGGGAGCCAGGGGCCGGAGC | + |
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Preference number: 2 (lower is better) Translates to: RDDSQGSTHVLGFRRTCCWRHAW*GARGRS Trigger: GCTCCGGCCCCTGGCTCCCCACCACGCATGCCTCCA...GCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR TCA 90 bp | TGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCTTGGAGCAGCTAACATaGAGTGTGTTCAGCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: CWFRFATPHTRRSGQPAALEQLT*SVFSLQ Trigger: CTGGAGGCTGAACACACTTCATGTTAGCTGCTCCAA...GGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR TCA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACGGCCCACAGGGAAACTaGTGTTTCATTGTACCGACC | + |
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Preference number: 2 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHGPQGN*CFIVPT Trigger: GGTCGGTACAATGAAACATCAGTTTCCCTGTGGGCC...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTCCATCACCCCCCACTCTCAACCATaGTCTGTGTGCTCTACCCAA | + |
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Preference number: 2 (lower is better) Translates to: TARHARSGGPRSYSGSITPHSQP*SVCSTQ Trigger: TTGGGTAGAGCACACAGATCATGGTTGAGAGTGGGG...GGTGATGGAGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGCCTGGCTGT 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTCTTTCCATGATCCTGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCGTGCCAGCCATGGATaGGGCTTCACCAGACGGATC | + |
|
Preference number: 2 (lower is better) Translates to: PCLSMILEGAQAWGLYVGRASHG*GFTRRI Trigger: GATCCGTCTGGTGAAGCCGCATCCATGGCTGGCACG...ACCCACGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR-3UTR CCA 90 bp | GAACCAGCCATGGAAGGAATTGTGGGCAGCCCATCTGCCCACAGAGAAAAGCCAGAAGCCAGGAGGGCCTaGCCTCCGCACAGGCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: EPAMEGIVGSPSAHREKPEARRA*PPHRPE Trigger: TTCTGGCCTGTGCGGAGGCCAGGCCCTCCTGGCTTC...TGGCTTTTCTCTGTGGGCAGATGGGCTGCCCACAATTCCTTCCATGGCTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGTGGAGGCATGCGTGGTaGGGAGCCAGGGGCCGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QITRDDSQGSTHVLGFRRWRHAW*GARGRS Trigger: GCTCCGGCCCCTGGCTCCCCACCACGCATGCCTCCA...CCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTATCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACTCACAGGAAGACTCCTaGGAGGGGAAGGAAGATCTC | + |
|
Preference number: 2 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHSQEDS*EGKEDL Trigger: GAGATCTTCCTTCCCCTCCCAGGAGTCTTCCTGTGA...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR CCA 90 bp | CAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCAAAGTCGACGACATGGTGCCTCCCCTGTAAATaGAGAAGCAAGATTTACCTG | + |
|
Preference number: 2 (lower is better) Translates to: QLLTPAGPASQRPKSTTWCLPCK*RSKIYL Trigger: CAGGTAAATCTTGCTTCTCCATTTACAGGGGAGGCA...CCATGTCGTCGACTTTGGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR TCA 90 bp | CGGGGGCTGTCTTCGCTGCCTTGCTTCCTGCTCGCCGAACAGAAAACCAGCATTTCAGTTGCTCCACTGTaGACTCCTGGGACAGTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: RGLSSLPCFLLAEQKTSISVAPL*TPGTVA Trigger: TGCCACTGTCCCAGGAGTTCACAGTGGAGCAACTGA...AATGCTGGTTTTCTGTTCGGCGAGCAGGAAGCAAGGCAGCGAAGACAGCCCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | ATTGTGGGCAGCCCATCTGCCCACAGAGAAAAGCCACTCTGCCCGGCTCCTCTCGGTTTCCGTAGGACATaGTGCTATGGAAACGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: IVGSPSAHREKPLCPAPLGFRRT*CYGNAG Trigger: CCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACC...GAGAGGAGCCGGGCAGAGTGGCTTTTCTCTGTGGGCAGATGGGCTGCCCACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCACACCGATCCTTCTAATCCGGGTGAACCAGCCATaGAAGGAATTGTGGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: WKAPRHGVCTWVTPILLIRVNQP*KELWAA Trigger: GGCTGCCCACAATTCCTTCCATGGCTGGTTCACCCG...GATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTGTCTTTCCATGATCCTGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTTTCCGTAGGACATGCTaGTATGGAAACGCAGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PCLSMILEGAQAWGLYVGFRRTC*YGNAGC Trigger: GCACCCTGCGTTTCCATAGCAGCATGTCCTACGGAA...ACCCACGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR GCA 90 bp | CCCGGGGGCTGTCTTCGCTGCCTTGCTTCCTGCTCGCCGAACAGAAAACCAGCAAAGGCTCTACACACGTaGTTGGTTTCCGTAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: PGGCLRCLASCSPNRKPAKALHT*LVSVGH Trigger: ATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTT...TGCTGGTTTTCTGTTCGGCGAGCAGGAAGCAAGGCAGCGAAGACAGCCCCCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | ACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTCCATCACCGCAATTGTCCCAAAATaGATGTTGGTTTCGGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: TARHARSGGPRSYSGSITAIVPK*MLVSVC Trigger: GCAAACCGAAACCAACATGCATTTTGGGACAATTGC...GGTGATGGAGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGCCTGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCACACCGATCCTTCTAATCACACCTGTCCTCAGTTaGTCCACTGTGAACTCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: WKAPRHGVCTWVTPILLITPVLS*STVNSW Trigger: CCAGGAGTTCACAGTGGAGCAACTGAGGACAGGTGT...GATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR-3UTR CCA 90 bp | CTCAAACACCATGTACAGATGGTCCTCATTAGGGTCATCCAGGACCTCTACCAGGGTACACTTGCTCGATaGGGCCCCTGGGCTGGATGC | + |
|
Preference number: 2 (lower is better) Translates to: LKHHVQMVLIRVIQDLYQGTLAR*GPWAGC Trigger: GCATCCAGCCCAGGGGCCCCATCGAGCAAGTGTACC...CTGGTAGAGGTCCTGGATGACCCTAATGAGGACCATCTGTACATGGTGTTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR-3UTR CCA 90 bp | CGGGCCTGGTCTTCGGACAGTGGCTTGAGGGTGGGCACTTCCATTACAGGCCCTAACACCATGTACAGATaGTCCTCATTAGGGTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: RAWSSDSGLRVGTSITGPNTMYR*SSLGSS Trigger: GGATGACCCTAATGAGGACCATCTGTACATGGTGTT...AGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGACCAGGCCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| 3UTR CAA 90 bp | CCACAGAGCTGGAGAAGACAGAAACCAACAATCTTCCCTAGCACCTaGGGAGCCAATGGAGGCTGTGGTTGGCAATGTAAAGTGCGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: PQSWRRQKPTIFPST*GANGGCGWQCKVRP Trigger: GGGGCGCACTTTACATTGCCAACCACAGCCTCCATTGGCTCCCAAGGTGCTAGGGAAGATTGTTGGTTTCTGTCTTCTCCAGCTCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR GCA 90 bp | ATTACAGAGGCAAAAACATTCATCTGCTCCAGAAGTTGTAGGTTACATGGGCCTGGTGCAGCAGCCCCGTaGAGGGCCACACAGCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ITEAKTFICSRSCRLHGPGAAAP*RATQPG Trigger: GCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACC...AGGCCCATGTAACCTACAACTTCTGGAGCAGATGAATGTTTTTGCCTCTGTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | AGGTTCGTTCACGGTCCAGTTGAGAGGCTGCCTTGGTTTCAGCAGGCCTTTGCTACCACAGCTGAGGAATaGTCGCATTCAGGGGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RFVHGPVERLPWFQQAFATTAEE*SHSGVQ Trigger: TTGCACCCCTGAATGCGAGCATTCCTCAGCTGTGGT...AGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGCTTAACAAACCATACGGAAGGAAGCCAGGAGGGCCTGGCCTCCGCACACCACTACCAAAGCACTaGAAACCAGTCTGGAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: KELNKPYGRKPGGPGLRTPLPKH*KPVWKP Trigger: GGGCTTCCAGACTGGTTTCCAGTGCTTTGGTAGTGG...TGTGCGGAGGCCAGGCCCTCCTGGCTTCCTTCCGTATGGTTTGTTAAGCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCCACCTTGGGAGCCAATaGAGGCTGTGGTTGGCAATG | + |
|
Preference number: 2 (lower is better) Translates to: LSQNACWFRFATPHTRRSHLGSQ*RLWLAM Trigger: CATTGCCAACCACAGCCTCCATTGGCTCCCAAGGTG...GGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGGACTCCCATCGCCATTaGCATGCATGGGCAATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: VKALHTCLVSVGHAAMETDSHRH*HAWAMQ Trigger: CTGCATTGCCCATGCATGTCAATGGCGATGGGAGTC...CGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGCACCTATGCTCTGTGTGTaGGTACTTAGGTCACGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: QGSTHVLGFRRTCCYGNAPMLCV*VLRSRP Trigger: GGGCCGTGACCTAAGTACGCACACACAGAGCATAGG...TGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR CCA 90 bp | GAATCACGGGTGAACCAGCCATGGAAGGAATTGTGGGCAGCCCATCTGCCCACATTGCTTCTGTGTCCCTaGGTCATCACACCCAAACTT | + |
|
Preference number: 2 (lower is better) Translates to: ESRVNQPWKELWAAHLPTLLLCP*VITPKL Trigger: AAGTTTGGGTGTGATGACCCAGGGACACAGAAGCAA...TGTGGGCAGATGGGCTGCCCACAATTCCTTCCATGGCTGGTTCACCCGTGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR CAA 90 bp | GTCTTCGGACAGTGGCTTGAGGGTGGGCACTTCCATTACAGGCCCTaGGTTCACCAACTCAAACACCATGTACAGATGGTCCTCATTAGG | + |
|
Preference number: 2 (lower is better) Translates to: VFGQWLEGGHFHYRP*VHQLKHHVQMVLIR Trigger: CCTAATGAGGACCATCTGTACATGGTGTTTGAGTTGGTGAACCAAGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR-3UTR TCA 90 bp | CACCATGTACAGATGGTCCTCATTAGGGTCATCCAGGACCTCTACCAGCTTCACCATTGTAGGCCAGCTTaGCAACACCATAGGAGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: HHVQMVLIRVIQDLYQLHHCRPA*QHHRSP Trigger: AGGGCTCCTATGGTGTTGTCAAGCTGGCCTACAATG...GTGAAGCTGGTAGAGGTCCTGGATGACCCTAATGAGGACCATCTGTACATGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR-3UTR GCA 90 bp | TCGCATTCAGGGGTGCAAAGTACCCCTCGAGCATTTCAACTGCAAGCCCTTGTATTCCGTAGGACATGCTaGTATGGAAACGCAGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SHSGVQSTPRAFQLQALVFRRTC*YGNAGC Trigger: GCACCCTGCGTTTCCATAGCAGCATGTCCTACGGAA...TACAAGGGCTTGCAGTTGAAATGCTCGAGGGGTACTTTGCACCCCTGAATGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR GCA 90 bp | TGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGAAGGCTCTACACACGTaGTTGGTTTCCGTAGGACAT | + |
|
Preference number: 2 (lower is better) Translates to: CPKMHVGFGLQLLTPAGPKALHT*LVSVGH Trigger: ATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTT...CGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR GCA 90 bp | GCCTTCAGGAAAAGCCTGCCACACCAGCCTACCACCCTAGGCTCACAGGAAGACGCAATTGTCCCAAAATaGATGTTGGTTTCGGTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: AFRKSLPHQPTTLGSQEDAIVPK*MLVSVC Trigger: GCAAACCGAAACCAACATGCATTTTGGGACAATTGC...GTCTTCCTGTGAGCCTAGGGTGGTAGGCTGGTGTGGCAGGCTTTTCCTGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGTTGGAGCAGCTAACATGAAGTGTGTTCAGCCTCCAGACAGACCTCTACCAACCACAGCTGAGGAATaGTCGCATTCAGGGGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: PVGAANMKCVQPPDRPLPTTAEE*SHSGVQ Trigger: TTGCACCCCTGAATGCGAGCATTCCTCAGCTGTGGT...TGGTAGAGGTCTGTCTGGAGGCTGAACACACTTCATGTTAGCTGCTCCAACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR CAA 90 bp | TCGTTCACGGTCCAGTTGAGAGGCTGCCTTGGTTTCAGCAGGCCTTaGCTCAGAGAAAGGCTTCACTTCTCAGTAACACAGAGATGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SFTVQLRGCLGFSRP*LRERLHFSVTQRWE Trigger: TTCCCATCTCTGTGTTACTGAGAAGTGAAGCCTTTCTCTGAGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR CCA 90 bp | CACCATGTACAGATGGTCCTCATTAGGGTCATCCAGGACCTCTACCAGCTTCACAGGATAGCAATCTCCTaGTACACTTGCTCGATGGGG | + |
|
Preference number: 2 (lower is better) Translates to: HHVQMVLIRVIQDLYQLHRIAIS*YTCSMG Trigger: CCCCATCGAGCAAGTGTACCAGGAGATTGCTATCCT...GTGAAGCTGGTAGAGGTCCTGGATGACCCTAATGAGGACCATCTGTACATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| 3UTR-3UTR TCA 90 bp | AAAGAGCTTAACAAACCATACGGAAGGAAGCCAGGAGGGCCTGGCCTCCGCACACTTGGAAACATCTCTTaGGCTGTAAGCCATGTAATG | + |
|
Preference number: 2 (lower is better) Translates to: KELNKPYGRKPGGPGLRTLGNIS*AVSHVM Trigger: CATTACATGGCTTACAGCTCAAGAGATGTTTCCAAG...TGTGCGGAGGCCAGGCCCTCCTGGCTTCCTTCCGTATGGTTTGTTAAGCTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR-3UTR GCA 90 bp | TCACCTGGTACATCTGACATGGTTCTGAATTCACAATGGAGGGGGCGGGTTTTTATGTTGGTTTCGGTTTaGAACTCCTCACACCCGCCG | + |
|
Preference number: 2 (lower is better) Translates to: SPGTSDMVLNSQWRGRVFMLVSV*NSSHPP Trigger: CGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACAT...AAAAACCCGCCCCCTCCATTGTGAATTCAGAACCATGTCAGATGTACCAGGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGACAATCTCAGAAACCCAGTTGGAGCAGCTAACATGAAGTGTGTTCAGCCTAGGCTCTCAGGGGAGTaGGGTTACCACCCAACATTA | + |
|
Preference number: 2 (lower is better) Translates to: ADNLRNPVGAANMKCVQPRLSGE*GYHPTL Trigger: TAATGTTGGGTGGTAACCCCACTCCCCTGAGAGCCT...AGGCTGAACACACTTCATGTTAGCTGCTCCAACTGGGTTTCTGAGATTGTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR CAA 90 bp | TCGAAAATAAACAAAGAAGCAAGAACAGGTTCGTTCACGGTCCAGTaGAGAGGCTGCCTTGGTTTCAGCAGGCCTTTGCTCAGAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SKINKEARTGSFTVQ*RGCLGFSRPLLRER Trigger: CCTTTCTCTGAGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCTGTTCTTGCTTCTTTGTTTATTTTCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR GCA 90 bp | GATTTACCTGAAAGAGCAGAAAACTATAGAACATGCGACCTATGGAACACCCCAGTCCAGTTGAGAGGCTaGCTTGGTTTCAGCAGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: DLPERAENYRTCDLWNTPVQLRG*LGFSRP Trigger: AGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGAC...TGGGGTGTTCCATAGGTCGCATGTTCTATAGTTTTCTGCTCTTTCAGGTAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| 3UTR-3UTR CCA 90 bp | TCAAGTTTACACAGAAGCTTGATCACCTGTGGAAAAACAACCGAAAGCTCATCTACCTCTCCGGAGTTCTaGCTAGTCAGAGACTTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSLHRSLITCGKTTESSSTSPEF*LVRDLE Trigger: TTCCAAGTCTCTGACTAGCCAGAACTCCGGAGAGGT...AGATGAGCTTTCGGTTGTTTTTCCACAGGTGATCAAGCTTCTGTGTAAACTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| 3UTR CAA 90 bp | CCCTGGGTCATCACACCCAAACTTCAACCAAACTTCCAATATTGGTaGAAAGTCAAAAAGGTTCCTATTGGCTCTCTAGGTTTCTGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: PWVITPKLQPNFQYW*KVKKVPIGSLGFWL Trigger: TAGCCAGAAACCTAGAGAGCCAATAGGAACCTTTTTGACTTTCAACCAATATTGGAAGTTTGGTTGAAGTTTGGGTGTGATGACCCAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CAA 90 bp | GTGTCCCTGGGTCATCACACCCAAACTTCAACCAAACTTCCAATATaGGTTGAAAGTCAAAAAGGTTCCTATTGGCTCTCTAGGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VSLGHHTQTSTKLPI*VESQKGSYWLSRFL Trigger: CAGAAACCTAGAGAGCCAATAGGAACCTTTTTGACTTTCAACCAATATTGGAAGTTTGGTTGAAGTTTGGGTGTGATGACCCAGGGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CAA 90 bp | GCCCGGCTCCTCTCCTCACTAATGATACTTTTGAAAAACAATTATTaGTGCTCTAATGCTCTAGTTATGGCTGGACCTCTTACACTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ARLLSSLMILLKNNY*CSNALVMAGPLTLS Trigger: GGAAAGTGTAAGAGGTCCAGCCATAACTAGAGCATTAGAGCACAAATAATTGTTTTTCAAAAGTATCATTAGTGAGGAGAGGAGCCGGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CAA 90 bp | GAGAAAAGCCACTCTGCCCGGCTCCTCTCCTCACTAATGATACTTTaGAAAAACAATTATTTGTGCTCTAATGCTCTAGTTATGGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: EKSHSARLLSSLMIL*KNNYLCSNALVMAG Trigger: TCCAGCCATAACTAGAGCATTAGAGCACAAATAATTGTTTTTCAAAAGTATCATTAGTGAGGAGAGGAGCCGGGCAGAGTGGCTTTTCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CAA 90 bp | GTGAACTGTGGTATCCACACGTCCCCAAGAAGGAACTACCTACGTTaGGGAATTACATTATCTGGTCTTTTTAATTTCAGAGAAGGATGT | + |
|
Preference number: 2 (lower is better) Translates to: VNCGIHTSPRRNYLR*GITLSGLFNFREGC Trigger: ACATCCTTCTCTGAAATTAAAAAGACCAGATAATGTAATTCCCAAACGTAGGTAGTTCCTTCTTGGGGACGTGTGGATACCACAGTTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | CAGCTACTCCGGCTCCATCACCTCCTCGGGCTGCAGTaGAGGCATGCGTGGTGGGGAGCCAGGGGCCGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLLRLHHLLGLQ*RHAWWGARGRS Trigger: GCTCCGGCCCCTGGCTCCCCACCACGCATGCCTCCACTGCAGCCCGAGGAGGTGATGGAGCCGGAGTAGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR GCA 72 bp | GCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTaGTGGCCATCACACACCCCTGGCTCGGTCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ALCGYGAFPESL*WPSHTPGSVPT Trigger: TGTGGGGACCGAGCCAGGGGTGTGTGATGGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| 3UTR CCA 72 bp | CTAGGAAGAGGCCCTCACAACCCCACTAGACCTGCCTaGCGTGCCAGCCATGGATGCGGCTTCACCAGACGG | + |
|
Preference number: 3 (lower is better) Translates to: LGRGPHNPTRPA*RASHGCGFTRR Trigger: CCGTCTGGTGAAGCCGCATCCATGGCTGGCACGCCAGGCAGGTCTAGTGGGGTTGTGAGGGCCTCTTCCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | GGTTTCCGTAGGACATGCTGCTATGGAAACGCAGGGTaGAGCAGCCCCGTGCAGGGCCACACAGCCAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GFRRTCCYGNAG*SSPVQGHTARH Trigger: ATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CCA 72 bp | TGCGGCTTCACCAGACGGATCGGGAGCTTAAAGGAGTaGGCTCAGCCCCAGGCTTCCTTCCAGCCGAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGFTRRIGSLKE*AQPQASFQPSL Trigger: CAGACTCGGCTGGAAGGAAGCCTGGGGCTGAGCCCACTCCTTTAAGCTCCCGATCCGTCTGGTGAAGCCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | TGGGAGCCAATGGAGGCTGTGGTTGGCAATGTAAAGTaGGCCCCCTGGAGGATGGGCGAGAGTTGCAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WEPMEAVVGNVK*APWRMGESCRP Trigger: AGGCCTGCAACTCTCGCCCATCCTCCAGGGGGCGCACTTTACATTGCCAACCACAGCCTCCATTGGCTCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR GCA 72 bp | AGTGGGCTCAGCCCCAGGCTTCCTTCCAGCCGAGTCTaGTTCGTGGGAAAAGCCACTGGCCTTGTCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SGLSPRLPSSRV*FVGKATGLVTQ Trigger: CTGAGTGACAAGGCCAGTGGCTTTTCCCACGAAGCAGACTCGGCTGGAAGGAAGCCTGGGGCTGAGCCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | AACCCCACTAGACCTGCCTGGCGTGCCAGCCATGGATaGGGCTTCACCAGACGGATCGGGAGCTTAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: NPTRPAWRASHG*GFTRRIGSLKE Trigger: CTCCTTTAAGCTCCCGATCCGTCTGGTGAAGCCGCATCCATGGCTGGCACGCCAGGCAGGTCTAGTGGGGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | AGGAAGCTGAACACTGCTCTCAGGAGAAGCCCTGTGTaGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RKLNTALRRSPV*IRCLPGVPLLA Trigger: GGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCTGAGAGCAGTGTTCAGCTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| 3UTR TCA 72 bp | TCCCTGCAGCTACTGAGGGCTAGCCCTGTCTTTCCATaGTCCTGGAAGGCGCCCAGGCATGGGGTTTGTACG | + |
|
Preference number: 3 (lower is better) Translates to: SLQLLRASPVFP*SWKAPRHGVCT Trigger: CGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGGCTAGCCCTCAGTAGCTGCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR TCA 72 bp | CTCCGCACAGGCCAGAAGTCGGTTGTCTGGGCCCCATaGCTGACTGGCAAGACAGCCACTACCAAAGCACTG | + |
|
Preference number: 3 (lower is better) Translates to: LRTGQKSVVWAP*LTGKTATTKAL Trigger: CAGTGCTTTGGTAGTGGCTGTCTTGCCAGTCAGTCATGGGGCCCAGACAACCGACTTCTGGCCTGTGCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR GCA 72 bp | GGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTaGTATGGAAACGCAGGGTGCAGCAGCCCCGTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GSTHVLGFRRTC*YGNAGCSSPVQ Trigger: CTGCACGGGGCTGCTGCACCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CCA 72 bp | TTCCCTAGCACCTTGGGAGCCAATGGAGGCTGTGGTTaGCAATGTAAAGTGCGCCCCCTGGAGGATGGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: FPSTLGANGGCG*QCKVRPLEDGR Trigger: TCGCCCATCCTCCAGGGGGCGCACTTTACATTGCCAACCACAGCCTCCATTGGCTCCCAAGGTGCTAGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCGTCCCAAAATGCATGTaGGTTTCGGTTTGCAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: MLVSVCNSSHPPVRPASGVPKCM*VSVCNS Trigger: GGAGTTGCAAACCGAAACCAACATGCATTTTGGGAC...GCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR TCA 72 bp | GGAAGTAGAAGCGGGCCTGGTCTTCGGACAGTGGCTTaGGGGTGGGCACTTCCATTACAGGCCCTTGGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GSRSGPGLRTVA*GWALPLQALGS Trigger: TGAACCAAGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGACCAGGCCCGCTTCTACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| 3UTR GCA 72 bp | CAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATaGTGCTATGGAAACGCAGGGTGCAGCAGCCCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: QGSTHVLGFRRT*CYGNAGCSSPV Trigger: CACGGGGCTGCTGCACCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CCA 72 bp | AGGATAAGGATTCTGTCCCCTGGAAAGGCCAGACCCTaGGAGGTGGCCTATGCAGCCCCAAGGGAGAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RIRILSPGKARP*EVAYAAPRENK Trigger: CTTGTTCTCCCTTGGGGCTGCATAGGCCACCTCCCAGGGTCTGGCCTTTCCAGGGGACAGAATCCTTATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CCA 72 bp | ATCCTGGAAGTAGAAGCGGGCCTGGTCTTCGGACAGTaGCTTGAGGGTGGGCACTTCCATTACAGGCCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ILEVEAGLVFGQ*LEGGHFHYRPL Trigger: CAAGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGACCAGGCCCGCTTCTACTTCCAGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| 3UTR TCA 72 bp | CCAGCATTAAGACTTGGAGAATTGATGGCGGAGCCCTaGCCGACTCCCACCTTTGCATGCCTCTGCTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PALRLGELMAEP*PTPTFACLCSH Trigger: GTGGGAGCAGAGGCATGCAAAGGTGGGAGTCGGTCAGGGCTCCGCCATCAATTCTCCAAGTCTTAATGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | AGAATTGATGGCGGAGCCCTGACCGACTCCCACCTTTaGATGCCTCTGCTCCCACATTCCCACGGGTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: RIDGGALTDSHL*MPLLPHSHGLH Trigger: ATGTAACCCGTGGGAATGTGGGAGCAGAGGCATGCAAAGGTGGGAGTCGGTCAGGGCTCCGCCATCAATTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | CGCGAATCACGGGTGAACCAGCCATGGAAGGAATTGTaGGCAGCCCATCTGCCCACAGAGAAAAGCCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: RESRVNQPWKEL*AAHLPTEKSHS Trigger: AGAGTGGCTTTTCTCTGTGGGCAGATGGGCTGCCCACAATTCCTTCCATGGCTGGTTCACCCGTGATTCGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CCA 72 bp | AAGCTGCTTACACGCGAATCACGGGTGAACCAGCCATaGAAGGAATTGTGGGCAGCCCATCTGCCCACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLLTRESRVNQP*KELWAAHLPTE Trigger: CTCTGTGGGCAGATGGGCTGCCCACAATTCCTTCCATGGCTGGTTCACCCGTGATTCGCGTGTAAGCAGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CCA 72 bp | CGCCTAGAAAGGTTCAAGGATAAGGATTCTGTCCCCTaGAAAGGCCAGACCCTGGGAGGTGGCCTATGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLERFKDKDSVP*KGQTLGGGLCS Trigger: GCTGCATAGGCCACCTCCCAGGGTCTGGCCTTTCCAGGGGACAGAATCCTTATCCTTGAACCTTTCTAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACCCAAGGAAGAGAAACTaGATTCAAAGGACTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHPRKRN*IQRTTA Trigger: TGCTGTAGTCCTTTGAATCAAGTTTCTCTTCCTTGG...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR TCA 72 bp | CTTTCAAGGCCAAGCTGCTTACACGCGAATCACGGGTaGACCAGCCATGGAAGGAATTGTGGGCAGCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: LSRPSCLHANHG*TSHGRNCGQPI Trigger: GATGGGCTGCCCACAATTCCTTCCATGGCTGGTTCACCCGTGATTCGCGTGTAAGCAGCTTGGCCTTGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR GCA 72 bp | AAAGCAATTGTCCCAAAATGCATGTTGGTTTCGGTTTaGAACTCCTCACACCCGCCGGTCCGGCCAGCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KAIVPKCMLVSV*NSSHPPVRPAS Trigger: GCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAATTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR GCA 72 bp | CTGGACGGGCATCAGTGGATGCTAGGAAATGAGACGTaGATAGACACAGCTCAGAGGAGGAGGAAGGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LDGHQWMLGNET*IDTAQRRRKVP Trigger: GGGAACCTTCCTCCTCCTCTGAGCTGTGTCTATGCACGTCTCATTTCCTAGCATCCACTGATGCCCGTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | CCCTGTCTTTCCATGATCCTGGAAGGCGCCCAGGCATaGGGTTTGTACGTGGGTCACACCGATCCTTCTAAT | + |
|
Preference number: 3 (lower is better) Translates to: PCLSMILEGAQA*GLYVGHTDPSN Trigger: ATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CCA 72 bp | CTATGGAACACCCCAAATCACCCCAAGGTCCTCCGGTaGGGTATGTTCTCTGAGGTCTACAGTGCTCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LWNTPNHPKVLR*GMFSEVYSALS Trigger: GGAGAGAGCACTGTAGACCTCAGAGAACATACCCCACCGGAGGACCTTGGGGTGATTTGGGGTGTTCCATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCACACCGATCCTTCTAATCTGGAAGCTCCAACCTTaGGAACTTGTGAACCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: WKAPRHGVCTWVTPILLIWKLQP*ELVNLS Trigger: GGAGAGGTTCACAAGTTCCAAAGGTTGGAGCTTCCA...GATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGTCTTTCCATGATCCTGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTATAGGTTCTGGGGCATaGAGCTCAAGTCCTCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: PCLSMILEGAQAWGLYVGIGSGA*SSSPQS Trigger: TGATTGAGGACTTGAGCTCAATGCCCCAGAACCTAT...ACCCACGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACAGGAACTACCTACGTTaGGGAATTACATTATCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHRNYLR*GITLSG Trigger: ACCAGATAATGTAATTCCCAAACGTAGGTAGTTCCT...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | GTGGGCAGCCCATCTGCCCACAGAGAAAAGCCACTCTaGCCGGCTCCTCTCCTCACTAATGATACTTTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VGSPSAHREKPL*PAPLLTNDTFE Trigger: TTCAAAAGTATCATTAGTGAGGAGAGGAGCCGGGCAGAGTGGCTTTTCTCTGTGGGCAGATGGGCTGCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR GCA 72 bp | GCAAGAACAGGTTCGTTCACGGTCCAGTTGAGAGGCTaGCTTGGTTTCAGCAGGCCTTTGCTCAGAGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ARTGSFTVQLRG*LGFSRPLLRER Trigger: CCTTTCTCTGAGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCTGTTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | GACAGTGGCAAGGATTTGTATGAATCGGCAGGTACATaGGGCCTTCAGGAAAAGCCTGCCACACCAGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: DSGKDLYESAGT*GLQEKPATPAY Trigger: GTAGGCTGGTGTGGCAGGCTTTTCCTGAAGGCCCCATGTACCTGCCGATTCATACAAATCCTTGCCACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | TTCCTGCTCGCCGAACAGAAAACCAGCATTAAGACTTaGAGAATTGATGGCGGAGCCCTGACCGACTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: FLLAEQKTSIKT*RIDGGALTDSH Trigger: GTGGGAGTCGGTCAGGGCTCCGCCATCAATTCTCCAAGTCTTAATGCTGGTTTTCTGTTCGGCGAGCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR TCA 72 bp | GCAGCTCAAACCCCACACACATTCACCTGGTACATCTaGCATGGTTCTGAATTCACAATGGAGGGGGCGGGT | + |
|
Preference number: 3 (lower is better) Translates to: AAQTPHTFTWYI*HGSEFTMEGAG Trigger: ACCCGCCCCCTCCATTGTGAATTCAGAACCATGTCAGATGTACCAGGTGAATGTGTGTGGGGTTTGAGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR TCA 72 bp | GACACCCATCCTGGAAGCTCCAACCTTTGGAACTTGTaGACCTCTCCGGAGTTCTGGCTAGTCAGAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: DTHPGSSNLWNL*TSPEFWLVRDL Trigger: CAAGTCTCTGACTAGCCAGAACTCCGGAGAGGTTCACAAGTTCCAAAGGTTGGAGCTTCCAGGATGGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR TCA 72 bp | CCGAAAGCCCTTTGCCCTGAGGAACACTCTGGGGTTTaGCACTTTGCTCTACAATGGCACCCTGATGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: PKALCPEEHSGV*HFALQWHPDVT Trigger: AGTGACATCAGGGTGCCATTGTAGAGCAAAGTGTCAAACCCCAGAGTGTTCCTCAGGGCAAAGGGCTTTCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR TCA 72 bp | CACGCACTCTACCAAAGAGCTACCAGCCCCAGCCTTTaGCAAGGCCACTGTGTGTCTGTGTTCACATTCACA | + |
|
Preference number: 3 (lower is better) Translates to: HALYQRATSPSL*QGHCVSVFTFT Trigger: TGTGAATGTGAACACAGACACACAGTGGCCTTGTCAAAGGCTGGGGCTGGTAGCTCTTTGGTAGAGTGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | ACAGGAAGTCCTTGGTCACACAGACCCTCCCCACACTaGAGTCTGTACCTGGATCCTAACTGCTTATGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TGSPWSHRPSPH*SLYLDPNCLCD Trigger: GTCACATAAGCAGTTAGGATCCAGGTACAGACTGCAGTGTGGGGAGGGTCTGTGTGACCAAGGACTTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CCA 72 bp | GGCCCTTGGTTCACCAACTCAAACACCATGTACAGATaGTCCTCATTAGGGTCATCCAGGACCTCTACCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GPWFTNSNTMYR*SSLGSSRTSTS Trigger: GCTGGTAGAGGTCCTGGATGACCCTAATGAGGACCATCTGTACATGGTGTTTGAGTTGGTGAACCAAGGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| 3UTR CCA 72 bp | AGTGGCTTGAGGGTGGGCACTTCCATTACAGGCCCTTaGTTCACCAACTCAAACACCATGTACAGATGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: SGLRVGTSITGP*FTNSNTMYRWS Trigger: GGACCATCTGTACATGGTGTTTGAGTTGGTGAACCAAGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| 3UTR CCA 72 bp | AACAGGTTCGTTCACGGTCCAGTTGAGAGGCTGCCTTaGTTTCAGCAGGCCTTTGCTCAGAGAAAGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NRFVHGPVERLP*FQQAFAQRKAS Trigger: TGAAGCCTTTCTCTGAGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | GTGACACCTGTCCTCAGTTGCTCCACTGTGAACTCCTaGGACAGTGGCAAGGATTTGTATGAATCGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: VTPVLSCSTVNS*DSGKDLYESAG Trigger: ACCTGCCGATTCATACAAATCCTTGCCACTGTCCCAGGAGTTCACAGTGGAGCAACTGAGGACAGGTGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGCAGCTCTACACACGTGCTaGGTTTCCGTAGGACATGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGSTHVLGFRRTCCYGNAALHTC*VSVGHA Trigger: AGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGC...TGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGGATGAGGAGGCCATCTCCCTAGCTGCTAATTCAGACACATCTTCCCAAGTCCGAGGAAAAACTTaGTTCTTCGAAGCTGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGDEEAISLAANSDTSSQVRGKT*FFEAGL Trigger: GAGCCCAGCTTCGAAGAACAAAGTTTTTCCTCGGAC...TTGGGAAGATGTGTCTGAATTAGCAGCTAGGGAGATGGCCTCCTCATCCCCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR TCA 72 bp | AAAGTTACCCATGCAGACCTCTCGATTCCTTCTTCCTaGGCAGCTGGTGGCTGCGTGATTGCCGACAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: KVTHADLSIPSS*AAGGCVIADNL Trigger: AAGATTGTCGGCAATCACGCAGCCACCAGCTGCTCAGGAAGAAGGAATCGAGAGGTCTGCATGGGTAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR TCA 72 bp | CTTCCCAAACAGCAGCAGGTGCTTTCTTATATCACATaGGCTCCTAAGGCACAGGTGGCCGATGAACAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPKQQQVLSYIT*APKAQVADEQP Trigger: AGGCTGTTCATCGGCCACCTGTGCCTTAGGAGCTCATGTGATATAAGAAAGCACCTGCTGCTGTTTGGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR TCA 72 bp | ACAAAGAAGCAAGAACAGGTTCGTTCACGGTCCAGTTaGGAGGCTGCCTTGGTTTCAGCAGGCCTTTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TKKQEQVRSRSS*EAALVSAGLCS Trigger: TGAGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCTGTTCTTGCTTCTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | AAGTCCCAAGTCCCACGAAACTCGAACCCACAGAGCTaGAGAAGACAGAAACCAACAATCTTCCCTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: KSQVPRNSNPQS*RRQKPTIFPST Trigger: GGTGCTAGGGAAGATTGTTGGTTTCTGTCTTCTCCAGCTCTGTGGGTTCGAGTTTCGTGGGACTTGGGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CCA 72 bp | AGAGGTCACGGGGAGTCAAACAGAAGCGGAGGGCACTaGTCACCAAATATAAAAGTCCCAAGTCCCACGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RGHGESNRSGGH*SPNIKVPSPTK Trigger: TTTCGTGGGACTTGGGACTTTTATATTTGGTGACCAGTGCCCTCCGCTTCTGTTTGACTCCCCGTGACCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CCA 72 bp | CTCAGAGAAAGGCTTCACTTCTCAGTAACACAGAGATaGGAACTACAGGTCACCCGGGAACAAGGTGGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LRERLHFSVTQR*ELQVTREQGGD Trigger: ATCCCCACCTTGTTCCCGGGTGACCTGTAGTTCCCATCTCTGTGTTACTGAGAAGTGAAGCCTTTCTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR-3UTR CAA 90 bp | CAATTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGGTCCCAAAATGCATGTaGGTTTCGGTTTGCAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLSQNACWFRFATPHTRRVPKCM*VSVCNS Trigger: GGAGTTGCAAACCGAAACCAACATGCATTTTGGGAC...CCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR-3UTR CAA 90 bp | CACCATGTACAGATGGTCCTCATTAGGGTCATCCAGGACCTCTACCAGCTTCACCGGATCAGCTTCTTTTaGGACAGCACTTTCATTGCG | + |
|
Preference number: 3 (lower is better) Translates to: HHVQMVLIRVIQDLYQLHRISFF*DSTFIA Trigger: CGCAATGAAAGTGCTGTCCAAAAAGAAGCTGATCCG...GTGAAGCTGGTAGAGGTCCTGGATGACCCTAATGAGGACCATCTGTACATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| 3UTR TCA 72 bp | AGGAAAAACTTTGTTCTTCGAAGCTGGGCTCAACAGTaGATTCTAGGAACCTGCCTGCCACCACCTACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKNFVLRSWAQQ*ILGTCLPPPTW Trigger: CCAGGTAGGTGGTGGCAGGCAGGTTCCTAGAATTCACTGTTGAGCCCAGCTTCGAAGAACAAAGTTTTTCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR TCA 72 bp | TCACATTCACACATGTATGCAGGCCAGAGGTCAACTTaGGGCAATTTCCCCTGGGGTACTGTCCGAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SHSHMYAGQRST*GNFPWGTVRGK Trigger: TTTTCCTCGGACAGTACCCCAGGGGAAATTGCCTCAAGTTGACCTCTGGCCTGCATACATGTGTGAATGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | GAGGCAATAAAGACAGAAAGAGAGGAACGAGGCTTGTaGTTTCAAGGCCAAGCTGCTTACACGCGAATCACG | + |
|
Preference number: 3 (lower is better) Translates to: EAIKTEREERGL*FQGQAAYTRIT Trigger: CGTGATTCGCGTGTAAGCAGCTTGGCCTTGAAAGCACAAGCCTCGTTCCTCTCTTTCTGTCTTTATTGCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR GCA 72 bp | CATTATCTGGTCTTTTTAATTTCAGAGAAGGATGTCTaGCCTCAAAGCTGCCGACTGGTGCGGACAGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: HYLVFLISEKDV*PQSCRLVRTGP Trigger: AGGGCCTGTCCGCACCAGTCGGCAGCTTTGAGGGCAGACATCCTTCTCTGAAATTAAAAAGACCAGATAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | GGAGAAGACAGAAACCAACAATCTTCCCTAGCACCTTaGGAGCCAATGGAGGCTGTGGTTGGCAATGTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GEDRNQQSSLAP*EPMEAVVGNVK Trigger: CTTTACATTGCCAACCACAGCCTCCATTGGCTCCCAAGGTGCTAGGGAAGATTGTTGGTTTCTGTCTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCCTTGGTTTCAGCAGGCCTTTGCTCAGAGAAAGGCTTCACTTCTCAGTAACCACTATGGACAAGCCTaGAAGACATGTCAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPWFQQAFAQRKASLLSNHYGQA*KTCQRE Trigger: CTCTCTCTGACATGTCTTCAAGGCTTGTCCATAGTG...GTTACTGAGAAGTGAAGCCTTTCTCTGAGCAAAGGCCTGCTGAAACCAAGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | AACGGACACATCTGTAGAAAACTGGACGGGCATCAGTaGATGCTAGGAAATGAGACGTGCATAGACACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NGHICRKLDGHQ*MLGNETCIDTA Trigger: AGCTGTGTCTATGCACGTCTCATTTCCTAGCATCCACTGATGCCCGTCCAGTTTTCTACAGATGTGTCCGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR TCA 72 bp | CCCACACACATTCACCTGGTACATCTGACATGGTTCTaGATTCACAATGGAGGGGGCGGGTTTTTGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: PTHIHLVHLTWF*IHNGGGGFLFV Trigger: AACAAACAAAAACCCGCCCCCTCCATTGTGAATTCAGAACCATGTCAGATGTACCAGGTGAATGTGTGTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR TCA 72 bp | TTACAAATAAATGACATGGAAGTTCCCTGCAGCTACTaGGGGCTAGCCCTGTCTTTCCATGATCCTGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQINDMEVPCSY*GLALSFHDPGR Trigger: CCTTCCAGGATCATGGAAAGACAGGGCTAGCCCTCAGTAGCTGCAGGGAACTTCCATGTCATTTATTTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CCA 72 bp | ACCAAGCTGTATGACCTGTTGGCTTTAACCATAAGGTaGCTATTGCAAACTAACGGAATGCCATCTGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TKLYDLLALTIR*LLQTNGMPSVA Trigger: GGCCACAGATGGCATTCCGTTAGTTTGCAATAGCCACCTTATGGTTAAAGCCAACAGGTCATACAGCTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CCA 72 bp | AGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAATaGCCAGAAGTGAAAGGCCACATACTGTATCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: REKERERERERE*PEVKGHILYHP Trigger: TGGGTGATACAGTATGTGGCCTTTCACTTCTGGCCATTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | AATCTTAAGACATCCTGTCGAGAGAAACCACGGCATTaGCCAGAGGGGTTGTGTAAACACAAGAATTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NLKTSCREKPRH*PEGLCKHKNSA Trigger: TGCAGAATTCTTGTGTTTACACAACCCCTCTGGGCAATGCCGTGGTTTCTCTCGACAGGATGTCTTAAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR TCA 72 bp | AGAGAGAGAGAGAGAGAGAGAGAGAATGGCCAGAAGTaGAAGGCCACATACTGTATCACCCACTTACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RERERERENGQK*KATYCITHLQK Trigger: TTTTTGTAAGTGGGTGATACAGTATGTGGCCTTTCACTTCTGGCCATTCTCTCTCTCTCTCTCTCTCTCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR TCA 72 bp | CTTGATTCAAAGGACTACAGCAAGTTCGCTCATTTGTaGCAGCCTAGACAGAAACACTGTCCACCAATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LDSKDYSKFAHL*QPRQKHCPPMD Trigger: ATCCATTGGTGGACAGTGTTTCTGTCTAGGCTGTCACAAATGAGCGAACTTGCTGTAGTCCTTTGAATCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR GCA 72 bp | TTACCACCCAACATTACAGAGGCAAAAACATTCATCTaGTCCAGAAGTTGTAGGTTACATGGGCCTAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: LPPNITEAKTFI*SRSCRLHGPRH Trigger: ATGTCTAGGCCCATGTAACCTACAACTTCTGGAGCAGATGAATGTTTTTGCCTCTGTAATGTTGGGTGGTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CCA 72 bp | TCACCTGGTACATCTGACATGGTTCTGAATTCACAATaGAGGGGGCGGGTTTTTGTTTGTTTGTTTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SPGTSDMVLNSQ*RGRVFVCLFVF Trigger: AAAAACAAACAAACAAACAAAAACCCGCCCCCTCCATTGTGAATTCAGAACCATGTCAGATGTACCAGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CCA 72 bp | GTCATCACACCCAAACTTCAACCAAACTTCCAATATTaGTTGAAAGTCAAAAAGGTTCCTATTGGCTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VITPKLQPNFQY*LKVKKVPIGSL Trigger: TAGAGAGCCAATAGGAACCTTTTTGACTTTCAACCAATATTGGAAGTTTGGTTGAAGTTTGGGTGTGATGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAGATGCCGGCCCGCCCTaGGACGGCTCCTGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AAPCRATQPGMRGQVVHADAGPP*DGSCRD Trigger: GTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATC...TGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGTGGAGGCATGCGTGGTaGGGAGCCAGGGGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQPRAGPHSQACEVRWSTWRHAW*GARGRS Trigger: GCTCCGGCCCCTGGCTCCCCACCACGCATGCCTCCA...CGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 |
||
| CDS-3UTR GCA 90 bp | ACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGCTGCAGTGGAGGCATaGGTGGTGGGGAGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TQGAAAPCRATQPGMRGQAAVEA*VVGSQG Trigger: CCCCTGGCTCCCCACCACGCATGCCTCCACTGCAGC...CTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 |
||
| CDS-3UTR CCA 90 bp | AACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCACTGGATGCAGCCCCCTaGGGCTGGGCGAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NAGCSSPVQGHTARHARSLDAAP*GWASSS Trigger: CGAGGAGCTCGCCCAGCCCCAGGGGGCTGCATCCAG...TGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGTT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGTCCTCCGACGGCAATaGCTCGGCCCCGTGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AAAPCRATQPGMRGQVVHVLRRQ*LGPVPR Trigger: ACGAGGCACGGGGCCGAGCCATTGCCGTCGGAGGAC...GTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | ACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTCCACACCCCGGCCTaGCTCACACTCGGTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQGAAAPCRATQPGMRGQVHTPA*LTLGDH Trigger: GTGGTCACCGAGTGTGAGCCAGGCCGGGGTGTGGAC...CTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | AACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGTCCTCCGACGGCAATaGCTCGGCCCCGTGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NAGCSSPVQGHTARHARSVLRRQ*LGPVPR Trigger: ACGAGGCACGGGGCCGAGCCATTGCCGTCGGAGGAC...TGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | TGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCGCGACTCGGGTGCCATaGAGGCAGGTGTGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CWFRFATPHTRRSGQPAAATRVP*RQVCPR Trigger: CCGTGGGCACACCTGCCTTCATGGCACCCGAGTCGC...GGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCAGGTTTCCAGGCGCTaGCAGGGAACGTTCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GCSSPVQGHTARHARSGGQVSRR*QGTFLP Trigger: CGGGAGGAACGTTCCCTGTCAGCGCCTGGAAACCTG...ACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | GCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCACAGGTTTCCAGGCGCTaGCAGGGAACGTTCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AAPCRATQPGMRGQVVHAQVSRR*QGTFLP Trigger: CGGGAGGAACGTTCCCTGTCAGCGCCTGGAAACCTG...TGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CCTTCCCGGAGTCCCTCTGCTGGCCATCACACACCCCTGGCTCGGTCCCCACACGTCCACACCCCGGCCTaGCTCACACTCGGTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRSPSAGHHTPLARSPHVHTPA*LTLGDH Trigger: GTGGTCACCGAGTGTGAGCCAGGCCGGGGTGTGGAC...GTGTGGGGACCGAGCCAGGGGTGTGTGATGGCCAGCAGAGGGACTCCGGGAAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | CTCTCAGGAGAAGCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGGATGCCGGCCCGCCCTaGGACGGCTCCTGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSGEALCGYGAFPESLCWDAGPP*DGSCRD Trigger: GTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATC...CCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCTGAGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTCCATCACCCTGGATGCAGCCCCCTaGGGCTGGGCGAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TARHARSGGPRSYSGSITLDAAP*GWASSS Trigger: CGAGGAGCTCGCCCAGCCCCAGGGGGCTGCATCCAG...GGTGATGGAGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGCCTGGCTGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCAAAGTCGACGACATGGGCGGAGGGGAGGCAATaGCACAGGCAGGCAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLLTPAGPASQRPKSTTWAEGRQ*HRQADR Trigger: CCTGTCTGCCTGCCTGTGCCATTGCCTCCCCTCCGC...CCATGTCGTCGACTTTGGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR TCA 90 bp | ACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGATCTTGCGGGTCTCTaGGAGCGACTCGGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TQGAAAPCRATQPGMRGQDLAGL*ERLGCH Trigger: ATGGCACCCGAGTCGCTCTCAGAGACCCGCAAGATC...CTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | AACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCACAGGTTTCCAGGCGCTaGCAGGGAACGTTCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NAGCSSPVQGHTARHARSQVSRR*QGTFLP Trigger: CGGGAGGAACGTTCCCTGTCAGCGCCTGGAAACCTG...TGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | GGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTATCTCCTGGTACACTTaGTCGATGGGGCCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GCSSPVQGHTARHARSGGISWYT*SMGPLG Trigger: GCCCAGGGGCCCCATCGAGCAAGTGTACCAGGAGAT...ACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | TGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGCCATCACACACCCCTGGCGCCTCACAGGGCTTCTaGCCTTCCCGGCTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CGYGAFPESLCWPSHTPGASQGF*PSRLPP Trigger: GGGTGGCAGCCGGGAAGGCCAGAAGCCCTGTGAGGC...GCCAGGGGTGTGTGATGGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCCACGCAGCTACTCCGGCTCCATCACCTCCTCGGGCTGCAGTGGAGGCGGTACACTTGCTCGATaGGGCCCCTGGGCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GGPRSYSGSITSSGCSGGGTLAR*GPWAGC Trigger: GCATCCAGCCCAGGGGCCCCATCGAGCAAGTGTACC...GCCTCCACTGCAGCCCGAGGAGGTGATGGAGCCGGAGTAGCTGCGTGGACCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACGTCCTCCGACGGCAATaGCTCGGCCCCGTGCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHVLRRQ*LGPVPR Trigger: ACGAGGCACGGGGCCGAGCCATTGCCGTCGGAGGAC...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCGCTGCCTTGCTTCCTTaGGCTCAGACAAGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAAAPCRATQPGMRGQVVAALLP*AQTRAP Trigger: GGGAGCCCTTGTCTGAGCCCAAGGAAGCAAGGCAGC...GACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAGCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGCCATCGGTCTCTGGCCAGGTTaGGGTCCACACCCCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRSPVWIRCLPGVPLLAIGLWPG*GPHPGL Trigger: CAGGCCGGGGTGTGGACCTCAACCTGGCCAGAGACC...GATGGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCGGTCGCTGGTGGGCTaGCTAGAGACACATGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QQPRAGPHSQACEVRWSTRSLVG*LETHDD Trigger: GTCATCATGTGTCTCTAGCCAGCCCACCAGCGACCG...CGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGAAGCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGCCATCCTTCCCAGCTCATCCTaGGGGGCCACCCGGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRSPVWIRCLPGVPLLAILPSSS*GATRSL Trigger: CAGCGACCGGGTGGCCCCCCAGGATGAGCTGGGAAG...GATGGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCTCGGCCTCCGGAGGCTaGTCTCTGGCCAGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLVSVCNSSHPPVRPASGSASGG*SLARLR Trigger: CCTCAACCTGGCCAGAGACCAGCCTCCGGAGGCCGA...GCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACAT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | ACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGCTGGTCTTCGGACAGTaGCTTGAGGGTGGGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQGAAAPCRATQPGMRGQLVFGQ*LEGGHF Trigger: GAAGTGCCCACCCTCAAGCCACTGTCCGAAGACCAG...CTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTCCATCACCTCCTCGGGCTGGATGCCCCTCGCTaGAAACCCAGAGGCCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACEVRWSTQLLRLHHLLGLDAPR*KPRGPQ Trigger: CTGAGGGCCTCTGGGTTTCCAGCGAGGGGCATCCAG...CCCGAGGAGGTGATGGAGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR TCA 90 bp | ATTGTGGGCAGCCCATCTGCCCACAGAGAAAAGCCACTCTGCCCGGCTCCTCTCGGTCTCTGGCCAGGTTaGGGTCCACACCCCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IVGSPSAHREKPLCPAPLGLWPG*GPHPGL Trigger: CAGGCCGGGGTGTGGACCTCAACCTGGCCAGAGACC...GAGAGGAGCCGGGCAGAGTGGCTTTTCTCTGTGGGCAGATGGGCTGCCCACAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACCTTCGGACAGTGGCTTaGGGGTGGGCACTTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: AAAPCRATQPGMRGQVVHLRTVA*GWALPL Trigger: TAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAG...GTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCAAAGTCGACGACATGGCGGTCGCTGGTGGGCTaGCTAGAGACACATGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QLLTPAGPASQRPKSTTWRSLVG*LETHDD Trigger: GTCATCATGTGTCTCTAGCCAGCCCACCAGCGACCG...CCATGTCGTCGACTTTGGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | GGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTGGAAACTCCAGGGCCTaGCTCTTGATCTTACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCSSPVQGHTARHARSGGGNSRA*LLILLC Trigger: GCACAGTAAGATCAAGAGTCAGGCCCTGGAGTTTCC...ACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | CTTAACAAACCATACGGAAGGAAGCCAGGAGGGCCTGGCCTCCGCACAGGCCAGTCTGGCCTTCCCGGCTaGCACCCCCACTTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LNKPYGRKPGGPGLRTGQSGLPG*HPHFPA Trigger: AGCTGGGAAGTGGGGGTGGCAGCCGGGAAGGCCAGA...CTGGCCTGTGCGGAGGCCAGGCCCTCCTGGCTTCCTTCCGTATGGTTTGTTAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR GCA 90 bp | ACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGACAGGGATGGGCAGATaGAGCGTCCATTCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQGAAAPCRATQPGMRGQTGMGR*SVHSCP Trigger: TGGACATGAATGGACGCTGCATCTGCCCATCCCTGT...CTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCATCTCCTGGTACACTTaGTCGATGGGGCCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MLVSVCNSSHPPVRPASGISWYT*SMGPLG Trigger: GCCCAGGGGCCCCATCGAGCAAGTGTACCAGGAGAT...GCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CCCTGTCTTTCCATGATCCTGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTGGTGTGACTCTACTGTaGGCCGCCGGGGCATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PCLSMILEGAQAWGLYVGGVTLL*AAGASG Trigger: CCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACC...ACCCACGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CACACAGCCGCACAGAGGGACACCCATCCTGGAAGCTCCAACCTTTGGAACTTGCTGGATGCAGCCCCCTaGGGCTGGGCGAGCTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HTAAQRDTHPGSSNLWNLLDAAP*GWASSS Trigger: CGAGGAGCTCGCCCAGCCCCAGGGGGCTGCATCCAG...CAAGTTCCAAAGGTTGGAGCTTCCAGGATGGGTGTCCCTCTGTGCGGCTGTGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR TCA 90 bp | AGGAGAAGCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGCCATCAATGGAGACGTGGTGTaGCTCTACTGTGGGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RRSPVWIRCLPGVPLLAINGDVV*LYCGPP Trigger: CGGCGGCCCACAGTAGAGTCACACCACGTCTCCATT...GATGGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCCGGAGTCCCTCTGCTGGCCATCACACACCCCTGGCTCGGTCCCCACACCATTGTAGGCCAGCTTaGCAACACCATAGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSRSPSAGHHTPLARSPHHCRPA*QHHRSP Trigger: AGGGCTCCTATGGTGTTGTCAAGCTGGCCTACAATG...GTGTGGGGACCGAGCCAGGGGTGTGTGATGGCCAGCAGAGGGACTCCGGGAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR TCA 90 bp | GCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTCCATCACCTCCTCGGGCTTCGGACAGTGGCTTaGGGGTGGGCACTTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: ACEVRWSTQLLRLHHLLGLRTVA*GWALPL Trigger: TAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAG...CCCGAGGAGGTGATGGAGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCACACCGATCCTTCTAATCGCCTCACAGGGCTTCTaGCCTTCCCGGCTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: WKAPRHGVCTWVTPILLIASQGF*PSRLPP Trigger: GGGTGGCAGCCGGGAAGGCCAGAAGCCCTGTGAGGC...GATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GACCCACAGCAGGAAGCTGAACACTGCTCTCAGGAGAAGCCCTGTGTGGATACGGGTGTGACTCTACTGTaGGCCGCCGGGGCATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPQQEAEHCSQEKPCVDTGVTLL*AAGASG Trigger: CCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACC...CGTATCCACACAGGGCTTCTCCTGAGAGCAGTGTTCAGCTTCCTGCTGTGGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTGGAAACTCCAGGGCCTaGCTCTTGATCTTACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RATQPGMRGQVVHAATPAGNSRA*LLILLC Trigger: GCACAGTAAGATCAAGAGTCAGGCCCTGGAGTTTCC...AGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CTTAACAAACCATACGGAAGGAAGCCAGGAGGGCCTGGCCTCCGCACAGGCCAGAGGACTGTGGGGAGCTaGCTGGTGAGTAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNKPYGRKPGGPGLRTGQRTVGS*LVSRTG Trigger: CCCTGTCCTACTCACCAGCCAGCTCCCCACAGTCCT...CTGGCCTGTGCGGAGGCCAGGCCCTCCTGGCTTCCTTCCGTATGGTTTGTTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | AACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAAGGATAGCAATCTCCTaGTACACTTGCTCGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NAGCSSPVQGHTARHARSRIAIS*YTCSMG Trigger: CCCCATCGAGCAAGTGTACCAGGAGATTGCTATCCT...TGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GGTGGTCCACGCAGCTACTCCGGCTCCATCACCTCCTCGGGCTGCAGTGGAGGCAGGATAGCAATCTCCTaGTACACTTGCTCGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGPRSYSGSITSSGCSGGRIAIS*YTCSMG Trigger: CCCCATCGAGCAAGTGTACCAGGAGATTGCTATCCT...GCCTCCACTGCAGCCCGAGGAGGTGATGGAGCCGGAGTAGCTGCGTGGACCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCAAAGTACAGCGTCACACCCATaGCCCAAACATCCAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSVCNSSHPPVRPASGQSTASHP*PKHPTP Trigger: AGGCGTTGGATGTTTGGGCCATGGGTGTGACGCTGT...ACTTTGGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | CCAGTTGGAGCAGCTAACATGAAGTGTGTTCAGCCTCCAGACAGACCTCTACCACCCAGAGGCCCTCAGTaGGCCAGGCACAGCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVGAANMKCVQPPDRPLPPRGPQ*ARHSSP Trigger: GGGGCTGCTGTGCCTGGCTCACTGAGGGCCTCTGGG...TGGTAGAGGTCTGTCTGGAGGCTGAACACACTTCATGTTAGCTGCTCCAACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR GCA 90 bp | GTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCAAAGTTTCCGGAGAAGATCTTaGGGGTCTCTGAGAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: VSVCNSSHPPVRPASGQSFRRRS*GSLRAT Trigger: AGTCGCTCTCAGAGACCCGCAAGATCTTCTCCGGAA...ACTTTGGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | ATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCTTCCGGAGAAGATCTTaGGGGTCTCTGAGAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: MLVSVCNSSHPPVRPASGFRRRS*GSLRAT Trigger: AGTCGCTCTCAGAGACCCGCAAGATCTTCTCCGGAA...GCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAAACACCATGTACAGATaGTCCTCATTAGGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AAPCRATQPGMRGQVVHANTMYR*SSLGSS Trigger: GGATGACCCTAATGAGGACCATCTGTACATGGTGTT...TGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCACAATCCTGGACTCTaGATTTTTGTCCAACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: GCSSPVQGHTARHARSGGHNPGL*IFVQHP Trigger: CGGATGTTGGACAAAAATCCAGAGTCCAGGATTGTG...ACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATTGGAGGCATGCGTGGTaGGGAGCCAGGGGCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DDSQGSTHVLGFRRTCCYWRHAW*GARGRS Trigger: GCTCCGGCCCCTGGCTCCCCACCACGCATGCCTCCA...ATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 |
||
| CDS-3UTR GCA 90 bp | CTCTCAGGAGAAGCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGACAGGGATGGGCAGATaGAGCGTCCATTCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSGEALCGYGAFPESLCWTGMGR*SVHSCP Trigger: TGGACATGAATGGACGCTGCATCTGCCCATCCCTGT...CCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCTGAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCGTCCACACCCCGGCCTaGCTCACACTCGGTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RDDSQGSTHVLGFRRTCCVHTPA*LTLGDH Trigger: GTGGTCACCGAGTGTGAGCCAGGCCGGGGTGTGGAC...GCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GACCCACAGCAGGAAGCTGAACACTGCTCTCAGGAGAAGCCCTGTGTGGATACGAGGACTGTGGGGAGCTaGCTGGTGAGTAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPQQEAEHCSQEKPCVDTRTVGS*LVSRTG Trigger: CCCTGTCCTACTCACCAGCCAGCTCCCCACAGTCCT...CGTATCCACACAGGGCTTCTCCTGAGAGCAGTGTTCAGCTTCCTGCTGTGGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | TCGCATTCAGGGGTGCAAAGTACCCCTCGAGCATTTCAACTGCAAGCCCTTGTAGGTGTGACTCTACTGTaGGCCGCCGGGGCATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSGVQSTPRAFQLQALVGVTLL*AAGASG Trigger: CCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACC...TACAAGGGCTTGCAGTTGAAATGCTCGAGGGGTACTTTGCACCCCTGAATGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CTTAACAAACCATACGGAAGGAAGCCAGGAGGGCCTGGCCTCCGCACAGGCCAGACAGCGTCACACCCATaGCCCAAACATCCAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNKPYGRKPGGPGLRTGQTASHP*PKHPTP Trigger: AGGCGTTGGATGTTTGGGCCATGGGTGTGACGCTGT...CTGGCCTGTGCGGAGGCCAGGCCCTCCTGGCTTCCTTCCGTATGGTTTGTTAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | GACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGACGCAGGCATTCCGGGTaGAGCGCCATGCACCGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSQGSTHVLGFRRTCCYGRRHSG*SAMHRS Trigger: GCTGCGGTGCATGGCGCTCCACCCGGAATGCCTGCG...TCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR TCA 90 bp | ATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACAGGTCTCTGGCCAGGTTaGGGTCCACACCCCGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITRDDSQGSTHVLGFRRTGLWPG*GPHPGL Trigger: CAGGCCGGGGTGTGGACCTCAACCTGGCCAGAGACC...TGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | ACCTTGGGAGCCAATGGAGGCTGTGGTTGGCAATGTAAAGTGCGCCCCCTGGAGCTTCGGACAGTGGCTTaGGGGTGGGCACTTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: TLGANGGCGWQCKVRPLELRTVA*GWALPL Trigger: TAATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAG...CTCCAGGGGGCGCACTTTACATTGCCAACCACAGCCTCCATTGGCTCCCAAGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR TCA 90 bp | ATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACAGCGACTCGGGTGCCATaGAGGCAGGTGTGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ITRDDSQGSTHVLGFRRTATRVP*RQVCPR Trigger: CCGTGGGCACACCTGCCTTCATGGCACCCGAGTCGC...TGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | CAGATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGCACAGCAGCCCCGGCTaGAGGCACGTCTTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QITRDDSQGSTHVLGFRRHSSPG*RHVLPA Trigger: AGCAGGCAAGACGTGCCTTCAGCCGGGGCTGCTGTG...CCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR GCA 90 bp | TCGCATTCAGGGGTGCAAAGTACCCCTCGAGCATTTCAACTGCAAGCCCTTGTATCTGGCCTTCCCGGCTaGCACCCCCACTTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSGVQSTPRAFQLQALVSGLPG*HPHFPA Trigger: AGCTGGGAAGTGGGGGTGGCAGCCGGGAAGGCCAGA...TACAAGGGCTTGCAGTTGAAATGCTCGAGGGGTACTTTGCACCCCTGAATGCGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GACCCACAGCAGGAAGCTGAACACTGCTCTCAGGAGAAGCCCTGTGTGGATACGCGGTCGCTGGTGGGCTaGCTAGAGACACATGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPQQEAEHCSQEKPCVDTRSLVG*LETHDD Trigger: GTCATCATGTGTCTCTAGCCAGCCCACCAGCGACCG...CGTATCCACACAGGGCTTCTCCTGAGAGCAGTGTTCAGCTTCCTGCTGTGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | CAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGCATCGGCCTCCGGAGGCTaGTCTCTGGCCAGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSTHVLGFRRTCCYGNASASGG*SLARLR Trigger: CCTCAACCTGGCCAGAGACCAGCCTCCGGAGGCCGA...TGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CTCAAACACCATGTACAGATGGTCCTCATTAGGGTCATCCAGGACCTCTACCAGGGTGTGACTCTACTGTaGGCCGCCGGGGCATCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKHHVQMVLIRVIQDLYQGVTLL*AAGASG Trigger: CCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACC...CTGGTAGAGGTCCTGGATGACCCTAATGAGGACCATCTGTACATGGTGTTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| 3UTR CAA 72 bp | CTTTCCATGATCCTGGAAGGCGCCCAGGCATGGGGTTaGTACGTGGGTCACACCGATCCTTCTAATCCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSMILEGAQAWG*YVGHTDPSNPP Trigger: GGGCGGATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | GTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCAGTACTCTATGCCTTTaGTCAGATCCTGGAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQGHTARHARSGGPRSYSSTLCL*SDPGSR Trigger: TCTACTTCCAGGATCTGATCAAAGGCATAGAGTACT...GGAGTAGCTGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCACACCGATCCTTCTAATCCCCAAGGGTGCAGCTTaGTTTCAGGCACCACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: WKAPRHGVCTWVTPILLIPKGAA*FQAPQS Trigger: GGATTGTGGTGCCTGAAATCAAGCTGCACCCTTGGG...GATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | AAAACAGATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGGCTGCAGTGGAGGCATaGGTGGTGGGGAGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTDNQRRQSRLYTRAWFPAAVEA*VVGSQG Trigger: CCCCTGGCTCCCCACCACGCATGCCTCCACTGCAGC...CGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTATCTGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 |
||
| CDS-3UTR CCA 90 bp | ACGCAGCTCAAACCCCACACACATTCACCTGGTACATCTGACATGGTTCTGAATCTTCCCAGCTCATCCTaGGGGGCCACCCGGTCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLKPHTHSPGTSDMVLNLPSSS*GATRSL Trigger: CAGCGACCGGGTGGCCCCCCAGGATGAGCTGGGAAG...ATTCAGAACCATGTCAGATGTACCAGGTGAATGTGTGTGGGGTTTGAGCTGCGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACAACACCATGTACAGATaGTCCTCATTAGGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHNTMYR*SSLGSS Trigger: GGATGACCCTAATGAGGACCATCTGTACATGGTGTT...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CAA 72 bp | ACACGCGAATCACGGGTGAACCAGCCATGGAAGGAATaGTGGGCAGCCCATCTGCCCACAGAGAAAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRESRVNQPWKE*WAAHLPTEKSH Trigger: GTGGCTTTTCTCTGTGGGCAGATGGGCTGCCCACAATTCCTTCCATGGCTGGTTCACCCGTGATTCGCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR TCA 90 bp | ATTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCAATGGAGACGTGGTGTaGCTCTACTGTGGGCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IVPKCMLVSVCNSSHPPVNGDVV*LYCGPP Trigger: CGGCGGCCCACAGTAGAGTCACACCACGTCTCCATT...GACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | TGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCACACCGATCCTTCTAATCCATTGTAGGCCAGCTTaGCAACACCATAGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WKAPRHGVCTWVTPILLIHCRPA*QHHRSP Trigger: AGGGCTCCTATGGTGTTGTCAAGCTGGCCTACAATG...GATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | ATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCGATTCCATGCCCAAGTaGATACTTAAGGATGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MLVSVCNSSHPPVRPASGDSMPK*ILKDES Trigger: ACTCTCATCCTTAAGTATCCACTTGGGCATGGAATC...GCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CTAGAATACACAGGCAATAAACAAACGCAGCTGCTAATATACAGGCACAGGTCTGATGCCGGCCCGCCCTaGGACGGCTCCTGCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LEYTGNKQTQLLIYRHRSDAGPP*DGSCRD Trigger: GTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATC...AGACCTGTGCCTGTATATTAGCAGCTGCGTTTGTTTATTGCCTGTGTATTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTTGGAGCAGCTAACATGAAGTGTGTTCAGCCTCCAGACAGACCTCTACCAAGGACTGTGGGGAGCTaGCTGGTGAGTAGGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PVGAANMKCVQPPDRPLPRTVGS*LVSRTG Trigger: CCCTGTCCTACTCACCAGCCAGCTCCCCACAGTCCT...TGGTAGAGGTCTGTCTGGAGGCTGAACACACTTCATGTTAGCTGCTCCAACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GCCTTCAGGAAAAGCCTGCCACACCAGCCTACCACCCTAGGCTCACAGGAAGACAGGATAGCAATCTCCTaGTACACTTGCTCGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AFRKSLPHQPTTLGSQEDRIAIS*YTCSMG Trigger: CCCCATCGAGCAAGTGTACCAGGAGATTGCTATCCT...GTCTTCCTGTGAGCCTAGGGTGGTAGGCTGGTGTGGCAGGCTTTTCCTGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR CCA 90 bp | AAAACATTCATCTGCTCCAGAAGTTGTAGGTTACATGGGCCTAGACATGCAGGCGCGAGCTCCTCGTGGTaGGGGGCGACCTGCAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KTFICSRSCRLHGPRHAGASSSW*GATCRK Trigger: CTTCCTGCAGGTCGCCCCCCACCACGAGGAGCTCGC...GCCTGCATGTCTAGGCCCATGTAACCTACAACTTCTGGAGCAGATGAATGTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR TCA 90 bp | CCCTGTCTTTCCATGATCCTGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTGGGAATGTGTTTGACTaGATTCTCGACCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PCLSMILEGAQAWGLYVGGNVFD*ILDLLF Trigger: GAAGAGGAGGTCGAGAATTCAGTCAAACACATTCCC...ACCCACGTACAAACCCCATGCCTGGGCGCCTTCCAGGATCATGGAAAGACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | AGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTCTCTTGATCTTACTGTaGAAACACATGATTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RATQPGMRGQVVHAATPALLILL*KHMIRS Trigger: TGAACGAATCATGTGTTTGCACAGTAAGATCAAGAG...AGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGAAGCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGCCATCGATTCCATGCCCAAGTaGATACTTAAGGATGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RRSPVWIRCLPGVPLLAIDSMPK*ILKDES Trigger: ACTCTCATCCTTAAGTATCCACTTGGGCATGGAATC...GATGGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CCA 90 bp | GGTTGTGTAAACACAAGAATTCTGCAGAGCTCTGTATCACGCCTACCCTACTCGGGTACACTTGCTCGATaGGGCCCCTGGGCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GCVNTRILQSSVSRLPYSGTLAR*GPWAGC Trigger: GCATCCAGCCCAGGGGCCCCATCGAGCAAGTGTACC...CGAGTAGGGTAGGCGTGATACAGAGCTCTGCAGAATTCTTGTGTTTACACAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | ACGCAGCTCAAACCCCACACACATTCACCTGGTACATCTGACATGGTTCTGAATGGTACACTTGCTCGATaGGGCCCCTGGGCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLKPHTHSPGTSDMVLNGTLAR*GPWAGC Trigger: GCATCCAGCCCAGGGGCCCCATCGAGCAAGTGTACC...ATTCAGAACCATGTCAGATGTACCAGGTGAATGTGTGTGGGGTTTGAGCTGCGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGCTGGTCTTCGGACAGTaGCTTGAGGGTGGGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKALHTCLVSVGHAAMETLVFGQ*LEGGHF Trigger: GAAGTGCCCACCCTCAAGCCACTGTCCGAAGACCAG...CGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CCAGTTGGAGCAGCTAACATGAAGTGTGTTCAGCCTCCAGACAGACCTCTACCACTGGTCTTCGGACAGTaGCTTGAGGGTGGGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVGAANMKCVQPPDRPLPLVFGQ*LEGGHF Trigger: GAAGTGCCCACCCTCAAGCCACTGTCCGAAGACCAG...TGGTAGAGGTCTGTCTGGAGGCTGAACACACTTCATGTTAGCTGCTCCAACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CAA 72 bp | AAAAGCAATTGTCCCAAAATGCATGTTGGTTTCGGTTaGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSNCPKMHVGFG*QLLTPAGPASQ Trigger: CTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAATTGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CAA 72 bp | GCACGCACTCTACCAAAGAGCTACCAGCCCCAGCCTTaGACAAGGCCACTGTGTGTCTGTGTTCACATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARTLPKSYQPQP*TRPLCVCVHIH Trigger: GTGAATGTGAACACAGACACACAGTGGCCTTGTCAAAGGCTGGGGCTGGTAGCTCTTTGGTAGAGTGCGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR TCA 90 bp | GATTTACCTGAAAGAGCAGAAAACTATAGAACATGCGACCTATGGAACACCCCAGCGACTCGGGTGCCATaGAGGCAGGTGTGCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: DLPERAENYRTCDLWNTPATRVP*RQVCPR Trigger: CCGTGGGCACACCTGCCTTCATGGCACCCGAGTCGC...TGGGGTGTTCCATAGGTCGCATGTTCTATAGTTTTCTGCTCTTTCAGGTAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR TCA 90 bp | ATTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCCCAAGGGTGCAGCTTaGTTTCAGGCACCACAATCC | + |
|
Preference number: 4 (lower is better) Translates to: IVPKCMLVSVCNSSHPPVPKGAA*FQAPQS Trigger: GGATTGTGGTGCCTGAAATCAAGCTGCACCCTTGGG...GACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | GATTCTTTCTTTATTCTGGCATGGGAAGGTCAGAGGTTAACTTGTAGGAGTGGGTCTGGCCTTCCCGGCTaGCACCCCCACTTCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSFFILAWEGQRLTCRSGSGLPG*HPHFPA Trigger: AGCTGGGAAGTGGGGGTGGCAGCCGGGAAGGCCAGA...CCCACTCCTACAAGTTAACCTCTGACCTTCCCATGCCAGAATAAAGAAAGAATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR GCA 90 bp | ACGCAGCTCAAACCCCACACACATTCACCTGGTACATCTGACATGGTTCTGAATATCTCCTGGTACACTTaGTCGATGGGGCCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TQLKPHTHSPGTSDMVLNISWYT*SMGPLG Trigger: GCCCAGGGGCCCCATCGAGCAAGTGTACCAGGAGAT...ATTCAGAACCATGTCAGATGTACCAGGTGAATGTGTGTGGGGTTTGAGCTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACCTCTTGATCTTACTGTaGAAACACATGATTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHLLILL*KHMIRS Trigger: TGAACGAATCATGTGTTTGCACAGTAAGATCAAGAG...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | TTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCCTGTCTTCGCTGCCTTaGTTCCTTGGGCTCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LSQNACWFRFATPHTRRSLSSLP*FLGLRQ Trigger: TTGTCTGAGCCCAAGGAAGCAAGGCAGCGAAGACAG...GGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | CTAGAATACACAGGCAATAAACAAACGCAGCTGCTAATATACAGGCACAGGTCTGCCTCACAGGGCTTCTaGCCTTCCCGGCTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: LEYTGNKQTQLLIYRHRSASQGF*PSRLPP Trigger: GGGTGGCAGCCGGGAAGGCCAGAAGCCCTGTGAGGC...AGACCTGTGCCTGTATATTAGCAGCTGCGTTTGTTTATTGCCTGTGTATTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | GATTCTTTCTTTATTCTGGCATGGGAAGGTCAGAGGTTAACTTGTAGGAGTGGGTCGGCCTCCGGAGGCTaGTCTCTGGCCAGGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSFFILAWEGQRLTCRSGSASGG*SLARLR Trigger: CCTCAACCTGGCCAGAGACCAGCCTCCGGAGGCCGA...CCCACTCCTACAAGTTAACCTCTGACCTTCCCATGCCAGAATAAAGAAAGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| 3UTR CAA 72 bp | CAGTGGCTTGAGGGTGGGCACTTCCATTACAGGCCCTaGGTTCACCAACTCAAACACCATGTACAGATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QWLEGGHFHYRP*VHQLKHHVQMV Trigger: GACCATCTGTACATGGTGTTTGAGTTGGTGAACCAAGGGCCTGTAATGGAAGTGCCCACCCTCAAGCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| CDS-3UTR TCA 90 bp | TCGCATTCAGGGGTGCAAAGTACCCCTCGAGCATTTCAACTGCAAGCCCTTGTACATTGTAGGCCAGCTTaGCAACACCATAGGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSGVQSTPRAFQLQALVHCRPA*QHHRSP Trigger: AGGGCTCCTATGGTGTTGTCAAGCTGGCCTACAATG...TACAAGGGCTTGCAGTTGAAATGCTCGAGGGGTACTTTGCACCCCTGAATGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | GACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAGGAAACTCCAGGGCCTaGCTCTTGATCTTACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DSQGSTHVLGFRRTCCYGGNSRA*LLILLC Trigger: GCACAGTAAGATCAAGAGTCAGGCCCTGGAGTTTCC...TCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | AGGTTCGTTCACGGTCCAGTTGAGAGGCTGCCTTGGTTTCAGCAGGCCTTTGCTGGGAATGTGTTTGACTaGATTCTCGACCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RFVHGPVERLPWFQQAFAGNVFD*ILDLLF Trigger: GAAGAGGAGGTCGAGAATTCAGTCAAACACATTCCC...AGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR GCA 90 bp | GACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATCTGTCTTCGCTGCCTTaGTTCCTTGGGCTCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: DDSQGSTHVLGFRRTCCYLSSLP*FLGLRQ Trigger: TTGTCTGAGCCCAAGGAAGCAAGGCAGCGAAGACAG...ATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 |
||
| CDS-3UTR TCA 90 bp | ACATCTGACATGGTTCTGAATTCACAATGGAGGGGGCGGGTTTTTGTTTGTTTGGATCTTGCGGGTCTCTaGGAGCGACTCGGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSDMVLNSQWRGRVFVCLDLAGL*ERLGCH Trigger: ATGGCACCCGAGTCGCTCTCAGAGACCCGCAAGATC...CAAACAAACAAAAACCCGCCCCCTCCATTGTGAATTCAGAACCATGTCAGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR TCA 90 bp | TTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGGAATGTGTTTGACTaGATTCTCGACCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSQNACWFRFATPHTRRSGNVFD*ILDLLF Trigger: GAAGAGGAGGTCGAGAATTCAGTCAAACACATTCCC...GGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR GCA 90 bp | GATTTACCTGAAAGAGCAGAAAACTATAGAACATGCGACCTATGGAACACCCCAACCCAAGCCCCTGGATaGCCCTCGCTGGAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLPERAENYRTCDLWNTPTQAPG*PSLETQ Trigger: CTGGGTTTCCAGCGAGGGGCATCCAGGGGCTTGGGT...TGGGGTGTTCCATAGGTCGCATGTTCTATAGTTTTCTGCTCTTTCAGGTAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR CCA 90 bp | TGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGAACACCATGTACAGATaGTCCTCATTAGGGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: CPKMHVGFGLQLLTPAGPNTMYR*SSLGSS Trigger: GGATGACCCTAATGAGGACCATCTGTACATGGTGTT...CGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CAA 72 bp | GGGGAGGCAATAAAGACAGAAAGAGAGGAACGAGGCTaGTGCTTTCAAGGCCAAGCTGCTTACACGCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GEAIKTEREERG*CFQGQAAYTRI Trigger: GATTCGCGTGTAAGCAGCTTGGCCTTGAAAGCACAAGCCTCGTTCCTCTCTTTCTGTCTTTATTGCCTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CAA 72 bp | GTCCAGTTGAGAGGCTGCCTTGGTTTCAGCAGGCCTTaGCTCAGAGAAAGGCTTCACTTCTCAGTAACACAG | + |
|
Preference number: 4 (lower is better) Translates to: VQLRGCLGFSRP*LRERLHFSVTQ Trigger: CTGTGTTACTGAGAAGTGAAGCCTTTCTCTGAGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CAA 72 bp | AACAAAGAAGCAAGAACAGGTTCGTTCACGGTCCAGTaGAGAGGCTGCCTTGGTTTCAGCAGGCCTTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKEARTGSFTVQ*RGCLGFSRPLL Trigger: GAGCAAAGGCCTGCTGAAACCAAGGCAGCCTCTCAACTGGACCGTGAACGAACCTGTTCTTGCTTCTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR TCA 90 bp | TGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGAGTACTCTATGCCTTTaGTCAGATCCTGGAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPKMHVGFGLQLLTPAGPSTLCL*SDPGSR Trigger: TCTACTTCCAGGATCTGATCAAAGGCATAGAGTACT...CGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| 3UTR CAA 72 bp | TCCTGTCGAGAGAAACCACGGCATTGCCCAGAGGGGTaGTGTAAACACAAGAATTCTGCAGAGCTCTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: SCREKPRHCPEG*CKHKNSAELCI Trigger: GATACAGAGCTCTGCAGAATTCTTGTGTTTACACAACCCCTCTGGGCAATGCCGTGGTTTCTCTCGACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | ACATCTGACATGGTTCTGAATTCACAATGGAGGGGGCGGGTTTTTGTTTGTTTGACAGCGTCACACCCATaGCCCAAACATCCAACGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TSDMVLNSQWRGRVFVCLTASHP*PKHPTP Trigger: AGGCGTTGGATGTTTGGGCCATGGGTGTGACGCTGT...CAAACAAACAAAAACCCGCCCCCTCCATTGTGAATTCAGAACCATGTCAGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | CAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGCACACAATCCTGGACTCTaGATTTTTGTCCAACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: QGSTHVLGFRRTCCYGNAHNPGL*IFVQHP Trigger: CGGATGTTGGACAAAAATCCAGAGTCCAGGATTGTG...TGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | ATTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCACAATCCTGGACTCTaGATTTTTGTCCAACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: IVPKCMLVSVCNSSHPPVHNPGL*IFVQHP Trigger: CGGATGTTGGACAAAAATCCAGAGTCCAGGATTGTG...GACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| 3UTR CAA 72 bp | TGGAGAAGACAGAAACCAACAATCTTCCCTAGCACCTaGGGAGCCAATGGAGGCTGTGGTTGGCAATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: WRRQKPTIFPST*GANGGCGWQCK Trigger: TTTACATTGCCAACCACAGCCTCCATTGGCTCCCAAGGTGCTAGGGAAGATTGTTGGTTTCTGTCTTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CAA 72 bp | ATGAAGCGCTGGCACAAGCTGCACTATGGACAAGCCTaGAAGACATGTCAGAGAGAGAGAGAGAGAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MKRWHKLHYGQA*KTCQRERERER Trigger: TCTTTCTCTCTCTCTCTCTCTCTGACATGTCTTCAAGGCTTGTCCATAGTGCAGCTTGTGCCAGCGCTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR TCA 90 bp | GACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAGTACTCTATGCCTTTaGTCAGATCCTGGAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DSQGSTHVLGFRRTCCYGSTLCL*SDPGSR Trigger: TCTACTTCCAGGATCTGATCAAAGGCATAGAGTACT...TCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR TCA 90 bp | CTGATGTTTCATTGTACCGACCAGACATTCTGGAAAAGGAAAGAAAGTTTACAGGATCTTGCGGGTCTCTaGGAGCGACTCGGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LMFHCTDQTFWKRKESLQDLAGL*ERLGCH Trigger: ATGGCACCCGAGTCGCTCTCAGAGACCCGCAAGATC...CTGTAAACTTTCTTTCCTTTTCCAGAATGTCTGGTCGGTACAATGAAACATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CCA 90 bp | ACACTTAAAAAGTCCTCATTACAAATAAATGACATGGAAGTTCCCTGCAGCTACGCTGCCTTGCTTCCTTaGGCTCAGACAAGGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLKKSSLQINDMEVPCSYAALLP*AQTRAP Trigger: GGGAGCCCTTGTCTGAGCCCAAGGAAGCAAGGCAGC...GTAGCTGCAGGGAACTTCCATGTCATTTATTTGTAATGAGGACTTTTTAAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGTTTACACAGAAGCTTGATCACCTGTGGAAAAACAACCGAAAGCTCATCTTTCCGGAGAAGATCTTaGGGGTCTCTGAGAGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSLHRSLITCGKTTESSSFRRRS*GSLRAT Trigger: AGTCGCTCTCAGAGACCCGCAAGATCTTCTCCGGAA...AGATGAGCTTTCGGTTGTTTTTCCACAGGTGATCAAGCTTCTGTGTAAACTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR GCA 90 bp | GACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATCTCTTGATCTTACTGTaGAAACACATGATTCGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DDSQGSTHVLGFRRTCCYLLILL*KHMIRS Trigger: TGAACGAATCATGTGTTTGCACAGTAAGATCAAGAG...ATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CCA 90 bp | ACGCAGCTCAAACCCCACACACATTCACCTGGTACATCTGACATGGTTCTGAATGATTCCATGCCCAAGTaGATACTTAAGGATGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLKPHTHSPGTSDMVLNDSMPK*ILKDES Trigger: ACTCTCATCCTTAAGTATCCACTTGGGCATGGAATC...ATTCAGAACCATGTCAGATGTACCAGGTGAATGTGTGTGGGGTTTGAGCTGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| 3UTR CAA 72 bp | CAGCCTCGTATAATGCAATTCCCAAGGAAGAGAAACTaGATTCAAAGGACTACAGCAAGTTCGCTCATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPRIMQFPRKRN*IQRTTASSLIC Trigger: ACAAATGAGCGAACTTGCTGTAGTCCTTTGAATCAAGTTTCTCTTCCTTGGGAATTGCATTATACGAGGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR CCA 90 bp | CTGATGTTTCATTGTACCGACCAGACATTCTGGAAAAGGAAAGAAAGTTTACAGCACAATCCTGGACTCTaGATTTTTGTCCAACATCCG | + |
|
Preference number: 4 (lower is better) Translates to: LMFHCTDQTFWKRKESLQHNPGL*IFVQHP Trigger: CGGATGTTGGACAAAAATCCAGAGTCCAGGATTGTG...CTGTAAACTTTCTTTCCTTTTCCAGAATGTCTGGTCGGTACAATGAAACATCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CAA 72 bp | GGTCATCACACCCAAACTTCAACCAAACTTCCAATATaGGTTGAAAGTCAAAAAGGTTCCTATTGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHHTQTSTKLPI*VESQKGSYWLS Trigger: AGAGAGCCAATAGGAACCTTTTTGACTTTCAACCAATATTGGAAGTTTGGTTGAAGTTTGGGTGTGATGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| 3UTR CAA 72 bp | GGTATCCACACGTCCCCAAGAAGGAACTACCTACGTTaGGGAATTACATTATCTGGTCTTTTTAATTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GIHTSPRRNYLR*GITLSGLFNFR Trigger: TCTGAAATTAAAAAGACCAGATAATGTAATTCCCAAACGTAGGTAGTTCCTTCTTGGGGACGTGTGGATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| 3UTR CAA 72 bp | ATCACACCCAAACTTCAACCAAACTTCCAATATTGGTaGAAAGTCAAAAAGGTTCCTATTGGCTCTCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITPKLQPNFQYW*KVKKVPIGSLG Trigger: ACCTAGAGAGCCAATAGGAACCTTTTTGACTTTCAACCAATATTGGAAGTTTGGTTGAAGTTTGGGTGTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS GCA 90 bp | GCAGGCATTCCGGGTGGAGCGCCATGCACCGCAGCCCAGCCCGCATaGACGACACGCCGTGGGACCCAAGCCCCTGGATGCCCCTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGIPGGAPCTAAQPA*TTRRGTQAPGCPSL Trigger: CAGCGAGGGGCATCCAGGGGCTTGGGTCCCACGGCGTGTCGTGCATGCGGGCTGGGCTGCGGTGCATGGCGCTCCACCCGGAATGCCTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS CCA 90 bp | CGCAGCCCAGCCCGCATGCACGACACGCCGTGGGACCCAAGCCCCTaGATGCCCCTCGCTGGAAACCCAGAGGCCCTCAGTGAGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RSPARMHDTPWDPSP*MPLAGNPEALSEPG Trigger: GCCTGGCTCACTGAGGGCCTCTGGGTTTCCAGCGAGGGGCATCCAGGGGCTTGGGTCCCACGGCGTGTCGTGCATGCGGGCTGGGCTGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS CCA 90 bp | TGGAGCGCCATGCACCGCAGCCCAGCCCGCATGCACGACACGCCGTaGGACCCAAGCCCCTGGATGCCCCTCGCTGGAAACCCAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WSAMHRSPARMHDTP*DPSPWMPLAGNPEA Trigger: GGCCTCTGGGTTTCCAGCGAGGGGCATCCAGGGGCTTGGGTCCCACGGCGTGTCGTGCATGCGGGCTGGGCTGCGGTGCATGGCGCTCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS GCA 90 bp | GCCCAGCCCGCATGCACGACACGCCGTGGGACCCAAGCCCCTGGATaGCCCTCGCTGGAAACCCAGAGGCCCTCAGTGAGCCAGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: AQPACTTRRGTQAPG*PSLETQRPSVSQAQ Trigger: CTGTGCCTGGCTCACTGAGGGCCTCTGGGTTTCCAGCGAGGGGCATCCAGGGGCTTGGGTCCCACGGCGTGTCGTGCATGCGGGCTGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS CCA 90 bp | AGCGGGGACCGGGACTCAGGGTCCGAGGCTTCGAGGGGGAGTTCCTaGCCATCGGCCTCCGGAGGCTGGTCTCTGGCCAGGTTGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGDRDSGSEASRGSS*PSASGGWSLARLRS Trigger: GGACCTCAACCTGGCCAGAGACCAGCCTCCGGAGGCCGATGGCCAGGAACTCCCCCTCGAAGCCTCGGACCCTGAGTCCCGGTCCCCGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS GCA 90 bp | TGCTGGATGCCGGCCCGCCCTGGGACGGCTCCTGCAGGGACATCTTaGGACCAGAAAGCGGGGACCGGGACTCAGGGTCCGAGGCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: CWMPARPGTAPAGTS*DQKAGTGTQGPRLR Trigger: TCGAAGCCTCGGACCCTGAGTCCCGGTCCCCGCTTTCTGGTCGCAAGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS GCA 90 bp | TCAGTGAGCCAGGCACAGCAGCCCCGGCTGAAGGCACGTCTTGCCTaGTGGAGATGCCCACGTGCTTGCTCTGCAGCTGACCGCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSQAQQPRLKARLA*WRCPRACSAADRPQ Trigger: CTGGGGGCGGTCAGCTGCAGAGCAAGCACGTGGGCATCTCCAGCAGGCAAGACGTGCCTTCAGCCGGGGCTGCTGTGCCTGGCTCACTGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS CCA 90 bp | CGGCGGCGGCGGCGTTCAAGAGTCTGCAAACCGGTAATGGAGACGTaGTGTGACTCTACTGTGGGCCGCCGGGGCATCCGGGGAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RRRRRSRVCKPVMET*CDSTVGRRGIRGED Trigger: GTCCTCTCCCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGACTCTTGAACGCCGCCGCCGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| CDS GCA 90 bp | TGGGCAGATGCAGCGTCCATTCATGTCCAGGCTGTTGCTGCTGGATaGCGGCCCGCCCTGGGACGGCTCCTGCAGGGACATCTTGCGACC | + |
|
Preference number: 5 (lower is better) Translates to: WADAASIHVQAVAAG*RPALGRLLQGHLAT Trigger: GGTCGCAAGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAGCAACAGCCTGGACATGAATGGACGCTGCATCTGCCCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS GCA 90 bp | AGGACAGGGATGGGCAGATGCAGCGTCCATTCATGTCCAGGCTGTTaGTGCTGGATGCCGGCCCGCCCTGGGACGGCTCCTGCAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RTGMGRCSVHSCPGC*CWMPARPGTAPAGT Trigger: TGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAGCAACAGCCTGGACATGAATGGACGCTGCATCTGCCCATCCCTGTCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000198257.5 ENSMUST00000200109.5 |
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| CDS GCA 90 bp | CTGAAGAACCTGGGTAAGTTCGCAGGCATTCCGGGTGGAGCGCCATaGACCGCAGCCCAGCCCGCATGCACGACACGCCGTGGGACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LKNLGKFAGIPGGAP*TAAQPACTTRRGTQ Trigger: TTGGGTCCCACGGCGTGTCGTGCATGCGGGCTGGGCTGCGGTGCATGGCGCTCCACCCGGAATGCCTGCGAACTTACCCAGGTTCTTCAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| CDS CCA 90 bp | GGGATGGGCAGATGCAGCGTCCATTCATGTCCAGGCTGTTGCTGCTaGATGCCGGCCCGCCCTGGGACGGCTCCTGCAGGGACATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GMGRCSVHSCPGCCC*MPARPGTAPAGTSC Trigger: GCAAGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAGCAACAGCCTGGACATGAATGGACGCTGCATCTGCCCATCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | GGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCTCCCCCACCAGGAGGTaGGAAGGTTTGATGTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GAAAPCRATQPGMRGQVVSPTRR*EGLMSR Trigger: TCGGGACATCAAACCTTCCAACCTCCTGGTGGGGGA...GACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS TCA 90 bp | GGGGCTGTCTTCGCTGCCTTGCTTCGTGAGCAGGTTTCCAGGCGCTaGCAGGGAACGTTCCTCCCGGCGGCTACCTTCGAACGGGTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GAVFAALLREQVSRR*QGTFLPAATFERVP Trigger: GGGAACCCGTTCGAAGGTAGCCGCCGGGAGGAACGTTCCCTGTCAGCGCCTGGAAACCTGCTCACGAAGCAAGGCAGCGAAGACAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200109.5 |
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| CDS TCA 90 bp | GCGGCGGCGTTCAAGAGTCTGCAAACCGGTAATGGAGACGTGGTGTaGCTCTACTGTGGGCCGCCGGGGCATCCGGGGAGAGGACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAFKSLQTGNGDVV*LYCGPPGHPGRGLW Trigger: CCACAGTCCTCTCCCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGACTCTTGAACGCCGCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| CDS GCA 90 bp | ACAGGGATGGGCAGATGCAGCGTCCATTCATGTCCAGGCTGTTGCTaGTGGATGCCGGCCCGCCCTGGGACGGCTCCTGCAGGGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: TGMGRCSVHSCPGCC*WMPARPGTAPAGTS Trigger: AGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAGCAACAGCCTGGACATGAATGGACGCTGCATCTGCCCATCCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | CTCTCAGGAGAAGCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGTGGTCTCTGGCCAGGTaGAGGTCCACACCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSGEALCGYGAFPESLCWWSLAR*RSTPRP Trigger: AGGCCGGGGTGTGGACCTCAACCTGGCCAGAGACCA...CCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCTTCTCCTGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
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| CDS-3UTR CAA 90 bp | GCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCACTGCCCTTGAACTCGTaGCTTACACCGAAGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAPCRATQPGMRGQVVHALPLNS*LTPKSA Trigger: TGCCGACTTCGGTGTAAGCAACGAGTTCAAGGGCAG...TGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | GCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACCTGCCCTTGAACTCGTaGCTTACACCGAAGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AAAPCRATQPGMRGQVVHLPLNS*LTPKSA Trigger: TGCCGACTTCGGTGTAAGCAACGAGTTCAAGGGCAG...GTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS CCA 90 bp | CTCCGGAGGCTGGTCTCTGGCCAGGTTGAGGTCCACACCCCGGCCTaGCTCACACTCGGTGACCACGATGAAGGATTCCATGCCCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LRRLVSGQVEVHTPA*LTLGDHDEGFHAQV Trigger: CACTTGGGCATGGAATCCTTCATCGTGGTCACCGAGTGTGAGCCAGGCCGGGGTGTGGACCTCAACCTGGCCAGAGACCAGCCTCCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000199599.2 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | ATTGTGGGCAGCCCATCTGCCCACAGAGAAAAGCCACTCTGCCCGGCTCCTCTCTGGTCTCTGGCCAGGTaGAGGTCCACACCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IVGSPSAHREKPLCPAPLWSLAR*RSTPRP Trigger: AGGCCGGGGTGTGGACCTCAACCTGGCCAGAGACCA...GAGAGGAGCCGGGCAGAGTGGCTTTTCTCTGTGGGCAGATGGGCTGCCCACAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| CDS-3UTR CAA 90 bp | ATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCAATCTCCTGGTACACTaGCTCGATGGGGCCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: MLVSVCNSSHPPVRPASGNLLVH*LDGAPG Trigger: CCCAGGGGCCCCATCGAGCAAGTGTACCAGGAGATT...GCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | GCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCATCCCTGGTTGGTTTTTaGGTGAGCAGGTTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AAPCRATQPGMRGQVVHASLVGF*VSRFPG Trigger: GCCTGGAAACCTGCTCACCAAAAAACCAACCAGGGA...TGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 |
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| CDS-3UTR CAA 90 bp | ACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGTCCCTGGTTGGTTTTTaGGTGAGCAGGTTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TQGAAAPCRATQPGMRGQSLVGF*VSRFPG Trigger: GCCTGGAAACCTGCTCACCAAAAAACCAACCAGGGA...CTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 ENSMUST00000198029.5 |
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| CDS TCA 90 bp | ATTCAGCTGCACGCAGTCCTGCAAACCGGTAATGGAGACGTGGTGTaGCTCTACTGTGGGCCGCCGGGGCATCCGGGGAGAGGACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IQLHAVLQTGNGDVV*LYCGPPGHPGRGLW Trigger: CCACAGTCCTCTCCCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGGACTGCGTGCAGCTGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000198257.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | ACGCAGGGTGCAGCAGCCCCGTGCAGGGCCACACAGCCAGGCATGCGAGGTCAGAGGAGGTTGGAAGGTTaGATGTCCCGATGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: TQGAAAPCRATQPGMRGQRRLEG*MSRWMI Trigger: GATCATCCATCGGGACATCAAACCTTCCAACCTCCT...CTGACCTCGCATGCCTGGCTGTGTGGCCCTGCACGGGGCTGCTGCACCCTGCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS GCA 90 bp | CTGCACGCAGTCCTGTTATCTCGGCGGCGGCGGCGTTCAAGAGTCTaGAAACCGGTAATGGAGACGTGGTGTGACTCTACTGTGGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LHAVLLSRRRRRSRV*KPVMETWCDSTVGR Trigger: GCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGACTCTTGAACGCCGCCGCCGCCGAGATAACAGGACTGCGTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
||
| CDS-3UTR CAA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACTCTTCGGACAGTGGCTaGAGGGTGGGCACTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHSSDSG*RVGTSI Trigger: AATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGA...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS TCA 90 bp | GGCCCAAACATCCAACGCCTTTCCGGAGAAGATCTTGCGGGTCTCTaGGAGCGACTCGGGTGCCATGAAGGCAGGTGTGCCCACGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GPNIQRLSGEDLAGL*ERLGCHEGRCAHGV Trigger: AACACCGTGGGCACACCTGCCTTCATGGCACCCGAGTCGCTCTCAGAGACCCGCAAGATCTTCTCCGGAAAGGCGTTGGATGTTTGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | GACCCACAGCAGGAAGCTGAACACTGCTCTCAGGAGAAGCCCTGTGTGGATACGTTCATGTCCAGGCTGTaGCTGCTGGATGCCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DPQQEAEHCSQEKPCVDTFMSRL*LLDAGP Trigger: CGGGCCGGCATCCAGCAGCAACAGCCTGGACATGAA...CGTATCCACACAGGGCTTCTCCTGAGAGCAGTGTTCAGCTTCCTGCTGTGGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CAA 90 bp | AGGGCCACACAGCCAGGCATGCGAGGTCAGGTGGTCCACGCAGCTACTCCGGCTTTACCAGGATCACAGTaGCCAGGCTGGGAATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RATQPGMRGQVVHAATPALPGSQ*PGWECV Trigger: AACACATTCCCAGCCTGGCAACTGTGATCCTGGTAA...AGCCGGAGTAGCTGCGTGGACCACCTGACCTCGCATGCCTGGCTGTGTGGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | CAGCCGGCAGGACTCGCCCCACGTGATTCTCCACGCAGCTCAAACCCCACACACAGGCTGGGAATGTGTTaGACTGAATTCTCGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPAGLAPRDSPRSSNPTHRLGMC*TEFSTS Trigger: GGAGGTCGAGAATTCAGTCAAACACATTCCCAGCCT...GTGTGTGGGGTTTGAGCTGCGTGGAGAATCACGTGGGGCGAGTCCTGCCGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | GTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCGGCCAGCCAGCGGCCAAAGTTTACCAGGATCACAGTaGCCAGGCTGGGAATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VSVCNSSHPPVRPASGQSLPGSQ*PGWECV Trigger: AACACATTCCCAGCCTGGCAACTGTGATCCTGGTAA...ACTTTGGCCGCTGGCTGGCCGGACCGGCGGGTGTGAGGAGTTGCAAACCGAAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS GCA 90 bp | TCCTCCGACGGCAATGGCTCGGCCCCGTGCCTCGTAACCCAAGGGTaGAGCTTGATTTCAGGCACCACAATCCTGGACTCTGGATTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSDGNGSAPCLVTQG*SLISGTTILDSGFL Trigger: CAAAAATCCAGAGTCCAGGATTGTGGTGCCTGAAATCAAGCTGCACCCTTGGGTTACGAGGCACGGGGCCGAGCCATTGCCGTCGGAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | GACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATTGGTCTCTGGCCAGGTaGAGGTCCACACCCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DDSQGSTHVLGFRRTCCYWSLAR*RSTPRP Trigger: AGGCCGGGGTGTGGACCTCAACCTGGCCAGAGACCA...ATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | AGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTTCATGTCCAGGCTGTaGCTGCTGGATGCCGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RDDSQGSTHVLGFRRTCCFMSRL*LLDAGP Trigger: CGGGCCGGCATCCAGCAGCAACAGCCTGGACATGAA...GCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
||
| CDS CCA 90 bp | CCTGGCTCACACTCGGTGACCACGATGAAGGATTCCATGCCCAAGTaGATACTTAAGGATGAGAGTCCCCGCAGTGCCTCACAGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PGSHSVTTMKDSMPK*ILKDESPRSASQGF Trigger: GAAGCCCTGTGAGGCACTGCGGGGACTCTCATCCTTAAGTATCCACTTGGGCATGGAATCCTTCATCGTGGTCACCGAGTGTGAGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000199599.2 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | AGCCCTGTGTGGATACGGTGCCTTCCCGGAGTCCCTCTGCTGGCCATCACACACCGGATCAGCTTCTTTTaGGACAGCACTTTCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPVWIRCLPGVPLLAITHRISFF*DSTFIA Trigger: CGCAATGAAAGTGCTGTCCAAAAAGAAGCTGATCCG...GTGTGTGATGGCCAGCAGAGGGACTCCGGGAAGGCACCGTATCCACACAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000196742.2 |
||
| CDS-3UTR CAA 90 bp | CGGGGGCTGTCTTCGCTGCCTTGCTTCCTGCTCGCCGAACAGAAAACCAGCATTAGGAGGTTGGAAGGTTaGATGTCCCGATGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: RGLSSLPCFLLAEQKTSIRRLEG*MSRWMI Trigger: GATCATCCATCGGGACATCAAACCTTCCAACCTCCT...AATGCTGGTTTTCTGTTCGGCGAGCAGGAAGCAAGGCAGCGAAGACAGCCCCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS-3UTR CAA 90 bp | GACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGACCGAAGTCGGCAATCTaGATGTGCCCGTCTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: DSQGSTHVLGFRRTCCYGPKSAI*MCPSSP Trigger: GGGGGAAGACGGGCACATCAAGATTGCCGACTTCGG...TCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | ATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACAAATCTCCTGGTACACTaGCTCGATGGGGCCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITRDDSQGSTHVLGFRRTNLLVH*LDGAPG Trigger: CCCAGGGGCCCCATCGAGCAAGTGTACCAGGAGATT...TGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGCAGGGTTCTTCGGACAGTGGCTaGAGGGTGGGCACTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ALHTCLVSVGHAAMETQGSSDSG*RVGTSI Trigger: AATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGA...ACCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGCAGGGTCTGCCCTTGAACTCGTaGCTTACACCGAAGTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALHTCLVSVGHAAMETQGLPLNS*LTPKSA Trigger: TGCCGACTTCGGTGTAAGCAACGAGTTCAAGGGCAG...ACCCTGCGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | TGGAAGGCGCCCAGGCATGGGGTTTGTACGTGGGTCACACCGATCCTTCTAATCAGGCTGGGAATGTGTTaGACTGAATTCTCGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKAPRHGVCTWVTPILLIRLGMC*TEFSTS Trigger: GGAGGTCGAGAATTCAGTCAAACACATTCCCAGCCT...GATTAGAAGGATCGGTGTGACCCACGTACAAACCCCATGCCTGGGCGCCTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | AAAACAGATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGCGCTGCCTTGCTTCCTaGGGCTCAGACAAGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KTDNQRRQSRLYTRAWFPRCLAS*GSDKGS Trigger: GGAGCCCTTGTCTGAGCCCAAGGAAGCAAGGCAGCG...CGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTATCTGTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 |
||
| CDS-3UTR CAA 90 bp | CCAGTTGGAGCAGCTAACATGAAGTGTGTTCAGCCTCCAGACAGACCTCTACCATCTTCGGACAGTGGCTaGAGGGTGGGCACTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: PVGAANMKCVQPPDRPLPSSDSG*RVGTSI Trigger: AATGGAAGTGCCCACCCTCAAGCCACTGTCCGAAGA...TGGTAGAGGTCTGTCTGGAGGCTGAACACACTTCATGTTAGCTGCTCCAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
||
| CDS-3UTR CAA 90 bp | CACAGAGAAAAGCCACTCTGCCCGGCTCCTCTCCTCACTAATGATACTTTTGAACCGAAGTCGGCAATCTaGATGTGCCCGTCTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: HREKPLCPAPLLTNDTFEPKSAI*MCPSSP Trigger: GGGGGAAGACGGGCACATCAAGATTGCCGACTTCGG...TTCAAAAGTATCATTAGTGAGGAGAGGAGCCGGGCAGAGTGGCTTTTCTCTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAGATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGCCGAAGTCGGCAATCTaGATGTGCCCGTCTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: KTDNQRRQSRLYTRAWFPPKSAI*MCPSSP Trigger: GGGGGAAGACGGGCACATCAAGATTGCCGACTTCGG...CGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTATCTGTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | CACAGAGAAAAGCCACTCTGCCCGGCTCCTCTCCTCACTAATGATACTTTTGAATCCCCCACCAGGAGGTaGGAAGGTTTGATGTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: HREKPLCPAPLLTNDTFESPTRR*EGLMSR Trigger: TCGGGACATCAAACCTTCCAACCTCCTGGTGGGGGA...TTCAAAAGTATCATTAGTGAGGAGAGGAGCCGGGCAGAGTGGCTTTTCTCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
||
| CDS-3UTR CAA 90 bp | AAAACAGATAACCAGAGACGACAGTCAAGGCTCTACACACGTGCTTGGTTTCCGTCCCCCACCAGGAGGTaGGAAGGTTTGATGTCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KTDNQRRQSRLYTRAWFPSPTRR*EGLMSR Trigger: TCGGGACATCAAACCTTCCAACCTCCTGGTGGGGGA...CGGAAACCAAGCACGTGTGTAGAGCCTTGACTGTCGTCTCTGGTTATCTGTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | TTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCAGGCTGGGAATGTGTTaGACTGAATTCTCGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSQNACWFRFATPHTRRSRLGMC*TEFSTS Trigger: GGAGGTCGAGAATTCAGTCAAACACATTCCCAGCCT...GGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | TTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCCCGGATCAGCTTCTTTTaGGACAGCACTTTCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSQNACWFRFATPHTRRSRISFF*DSTFIA Trigger: CGCAATGAAAGTGCTGTCCAAAAAGAAGCTGATCCG...GGACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | ATTGTCCCAAAATGCATGTTGGTTTCGGTTTGCAACTCCTCACACCCGCCGGTCTTACCAGGATCACAGTaGCCAGGCTGGGAATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: IVPKCMLVSVCNSSHPPVLPGSQ*PGWECV Trigger: AACACATTCCCAGCCTGGCAACTGTGATCCTGGTAA...GACCGGCGGGTGTGAGGAGTTGCAAACCGAAACCAACATGCATTTTGGGACAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS TCA 90 bp | TTCAAGTCTTCGGCTATATCGGGCTGGTCGGGAAACTCCAGGGCCTaGCTCTTGATCTTACTGTGCAAACACATGATTCGTTCATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: FKSSAISGWSGNSRA*LLILLCKHMIRSSM Trigger: CATGGATGAACGAATCATGTGTTTGCACAGTAAGATCAAGAGTCAGGCCCTGGAGTTTCCCGACCAGCCCGATATAGCCGAAGACTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | ATGGTTCTGAATTCACAATGGAGGGGGCGGGTTTTTGTTTGTTTGTTTGTTTTTCGCTGCCTTGCTTCCTaGGGCTCAGACAAGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MVLNSQWRGRVFVCLFVFRCLAS*GSDKGS Trigger: GGAGCCCTTGTCTGAGCCCAAGGAAGCAAGGCAGCG...AAAAACAAACAAACAAACAAAAACCCGCCCCCTCCATTGTGAATTCAGAACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| CDS-3UTR CAA 90 bp | GTCAAGGCTCTACACACGTGCTTGGTTTCCGTAGGACATGCTGCTATGGAAACGGTCTTTACCAGGATCTaGATTTCAGGCACCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: VKALHTCLVSVGHAAMETVFTRI*ISGTTI Trigger: GATTGTGGTGCCTGAAATCAAGATCCTGGTAAAGAC...CGTTTCCATAGCAGCATGTCCTACGGAAACCAAGCACGTGTGTAGAGCCTTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197373.2 |
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| CDS-3UTR CAA 90 bp | TCACCTGGTACATCTGACATGGTTCTGAATTCACAATGGAGGGGGCGGGTTTTTCGGATCAGCTTCTTTTaGGACAGCACTTTCATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPGTSDMVLNSQWRGRVFRISFF*DSTFIA Trigger: CGCAATGAAAGTGCTGTCCAAAAAGAAGCTGATCCG...AAAAACCCGCCCCCTCCATTGTGAATTCAGAACCATGTCAGATGTACCAGGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000200109.5 |
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| CDS TCA 90 bp | GGTTCCCGAATGAGCGCTTTCGAATCATGGTCTTTACCAGGATCTTaGTTTCAGGCACCACAATCCTGGACTCTGGATTTTTGTCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GSRMSAFESWSLPGS*FQAPQSWTLDFCPT Trigger: TGTTGGACAAAAATCCAGAGTCCAGGATTGTGGTGCCTGAAATCAAGATCCTGGTAAAGACCATGATTCGAAAGCGCTCATTCGGGAACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197373.2 |
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| CDS-3UTR CAA 90 bp | ACATCTGACATGGTTCTGAATTCACAATGGAGGGGGCGGGTTTTTGTTTGTTTGAGGAGGTTGGAAGGTTaGATGTCCCGATGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: TSDMVLNSQWRGRVFVCLRRLEG*MSRWMI Trigger: GATCATCCATCGGGACATCAAACCTTCCAACCTCCT...CAAACAAACAAAAACCCGCCCCCTCCATTGTGAATTCAGAACCATGTCAGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS-3UTR CAA 90 bp | CTGATGTTTCATTGTACCGACCAGACATTCTGGAAAAGGAAAGAAAGTTTACAGTCCCTGGTTGGTTTTTaGGTGAGCAGGTTTCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LMFHCTDQTFWKRKESLQSLVGF*VSRFPG Trigger: GCCTGGAAACCTGCTCACCAAAAAACCAACCAGGGA...CTGTAAACTTTCTTTCCTTTTCCAGAATGTCTGGTCGGTACAATGAAACATCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111668.8 |
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| CDS GCA 72 bp | CCGGGTGGAGCGCCATGCACCGCAGCCCAGCCCGCATaGACGACACGCCGTGGGACCCAAGCCCCTGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: PGGAPCTAAQPA*TTRRGTQAPGC Trigger: GCATCCAGGGGCTTGGGTCCCACGGCGTGTCGTGCATGCGGGCTGGGCTGCGGTGCATGGCGCTCCACCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| CDS GCA 72 bp | CCGGCCCGCCCTGGGACGGCTCCTGCAGGGACATCTTaGGACCAGAAAGCGGGGACCGGGACTCAGGGTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PARPGTAPAGTS*DQKAGTGTQGP Trigger: CGGACCCTGAGTCCCGGTCCCCGCTTTCTGGTCGCAAGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS CCA 72 bp | CCTTCCCGGCTGCCACCCCCACTTCCCAGCTCATCCTaGGGGGCCACCCGGTCGCTGGTGGGCTGGCTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PSRLPPPLPSSS*GATRSLVGWLE Trigger: CTCTAGCCAGCCCACCAGCGACCGGGTGGCCCCCCAGGATGAGCTGGGAAGTGGGGGTGGCAGCCGGGAAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000199599.2 ENSMUST00000200109.5 |
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| CDS CAA 72 bp | GCCGGCCCGCCCTGGGACGGCTCCTGCAGGGACATCTaGCGACCAGAAAGCGGGGACCGGGACTCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGPPWDGSCRDI*RPESGDRDSGS Trigger: GGACCCTGAGTCCCGGTCCCCGCTTTCTGGTCGCAAGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS CCA 72 bp | CGGGACTCAGGGTCCGAGGCTTCGAGGGGGAGTTCCTaGCCATCGGCCTCCGGAGGCTGGTCTCTGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RDSGSEASRGSS*PSASGGWSLAR Trigger: CCTGGCCAGAGACCAGCCTCCGGAGGCCGATGGCCAGGAACTCCCCCTCGAAGCCTCGGACCCTGAGTCCCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS CAA 90 bp | CTGCTGGATGCCGGCCCGCCCTGGGACGGCTCCTGCAGGGACATCTaGCGACCAGAAAGCGGGGACCGGGACTCAGGGTCCGAGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LLDAGPPWDGSCRDI*RPESGDRDSGSEAS Trigger: CGAAGCCTCGGACCCTGAGTCCCGGTCCCCGCTTTCTGGTCGCAAGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
||
| CDS GCA 72 bp | GCCGGCTCTGGGCCCCGGGGGCTGTCTTCGCTGCCTTaGTTCCTTGGGCTCAGACAAGGGCTCCCACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: AGSGPRGLSSLP*FLGLRQGLPLP Trigger: AGGGAGTGGGAGCCCTTGTCTGAGCCCAAGGAAGCAAGGCAGCGAAGACAGCCCCCGGGGCCCAGAGCCGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111668.8 ENSMUST00000197373.2 |
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| CDS GCA 72 bp | AAGGCACGTCTTGCCTGCTGGAGATGCCCACGTGCTTaGTCTGCAGCTGACCGCCCCCAGGCCCCAGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KARLACWRCPRA*SAADRPQAPAE Trigger: CTCCGCTGGGGCCTGGGGGCGGTCAGCTGCAGAGCAAGCACGTGGGCATCTCCAGCAGGCAAGACGTGCCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS GCA 72 bp | CAGCCCCGGCTGAAGGCACGTCTTGCCTGCTGGAGATaGCCACGTGCTTGCTCTGCAGCTGACCGCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPRLKARLACWR*PRACSAADRPQ Trigger: CTGGGGGCGGTCAGCTGCAGAGCAAGCACGTGGGCATCTCCAGCAGGCAAGACGTGCCTTCAGCCGGGGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS GCA 72 bp | GCATGCACGACACGCCGTGGGACCCAAGCCCCTGGATaGCCCTCGCTGGAAACCCAGAGGCCCTCAGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ACTTRRGTQAPG*PSLETQRPSVS Trigger: GCTCACTGAGGGCCTCTGGGTTTCCAGCGAGGGGCATCCAGGGGCTTGGGTCCCACGGCGTGTCGTGCATGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS GCA 72 bp | CTGGGTAAGTTCGCAGGCATTCCGGGTGGAGCGCCATaGACCGCAGCCCAGCCCGCATGCACGACACGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LGKFAGIPGGAP*TAAQPACTTRR Trigger: ACGGCGTGTCGTGCATGCGGGCTGGGCTGCGGTGCATGGCGCTCCACCCGGAATGCCTGCGAACTTACCCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS GCA 72 bp | GCAGCGTCCATTCATGTCCAGGCTGTTGCTGCTGGATaGCGGCCCGCCCTGGGACGGCTCCTGCAGGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: AASIHVQAVAAG*RPALGRLLQGH Trigger: ATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAGCAACAGCCTGGACATGAATGGACGCTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000198257.5 ENSMUST00000200109.5 |
||
| CDS CCA 72 bp | AGATGCAGCGTCCATTCATGTCCAGGCTGTTGCTGCTaGATGCCGGCCCGCCCTGGGACGGCTCCTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RCSVHSCPGCCC*MPARPGTAPAG Trigger: CCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAGCAACAGCCTGGACATGAATGGACGCTGCATCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000198257.5 ENSMUST00000200109.5 |
||
| CDS GCA 72 bp | CAGGCACAGCAGCCCCGGCTGAAGGCACGTCTTGCCTaGTGGAGATGCCCACGTGCTTGCTCTGCAGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: QAQQPRLKARLA*WRCPRACSAAD Trigger: GTCAGCTGCAGAGCAAGCACGTGGGCATCTCCAGCAGGCAAGACGTGCCTTCAGCCGGGGCTGCTGTGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
||
| CDS CCA 72 bp | ATGTCCAGGCTGTTGCTGCTGGATGCCGGCCCGCCCTaGGACGGCTCCTGCAGGGACATCTTGCGACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: MSRLLLLDAGPP*DGSCRDILRPE Trigger: TTCTGGTCGCAAGATGTCCCTGCAGGAGCCGTCCCAGGGCGGGCCGGCATCCAGCAGCAACAGCCTGGACAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000200109.5 |
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| CDS TCA 72 bp | CACGCAGTCCTGCAAACCGGTAATGGAGACGTGGTGTaGCTCTACTGTGGGCCGCCGGGGCATCCGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HAVLQTGNGDVV*LYCGPPGHPGR Trigger: TCTCCCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGGACTGCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000198257.5 ENSMUST00000200109.5 |
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| CDS CCA 72 bp | AGCTGCACGCAGTCCTGCAAACCGGTAATGGAGACGTaGTGTGACTCTACTGTGGGCCGCCGGGGCATCCGG | + |
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Preference number: 6 (lower is better) Translates to: SCTQSCKPVMET*CDSTVGRRGIR Trigger: CCGGATGCCCCGGCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGGACTGCGTGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000198257.5 ENSMUST00000200109.5 |
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| CDS CCA 72 bp | CGGCGTTCAAGAGTCTGCAAACCGGTAATGGAGACGTaGTGTGACTCTACTGTGGGCCGCCGGGGCATCCGG | + |
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Preference number: 6 (lower is better) Translates to: RRSRVCKPVMET*CDSTVGRRGIR Trigger: CCGGATGCCCCGGCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGACTCTTGAACGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| CDS TCA 72 bp | TTCGCTGCCTTGCTTCGTGAGCAGGTTTCCAGGCGCTaGCAGGGAACGTTCCTCCCGGCGGCTACCTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: FAALLREQVSRR*QGTFLPAATFE Trigger: TTCGAAGGTAGCCGCCGGGAGGAACGTTCCCTGTCAGCGCCTGGAAACCTGCTCACGAAGCAAGGCAGCGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200109.5 |
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| CDS GCA 72 bp | AATTCTCGACCTCCTCTTCGGTCACCTCGACCAGTGTaGAGTTCTCGTCCTCCGACGGCAATGGCTCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: NSRPPLRSPRPV*SSRPPTAMARP Trigger: GGGCCGAGCCATTGCCGTCGGAGGACGAGAACTGCACACTGGTCGAGGTGACCGAAGAGGAGGTCGAGAATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS CCA 72 bp | CTGGTCTCTGGCCAGGTTGAGGTCCACACCCCGGCCTaGCTCACACTCGGTGACCACGATGAAGGATTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LVSGQVEVHTPA*LTLGDHDEGFH Trigger: ATGGAATCCTTCATCGTGGTCACCGAGTGTGAGCCAGGCCGGGGTGTGGACCTCAACCTGGCCAGAGACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000199599.2 ENSMUST00000200109.5 |
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| CDS CAA 72 bp | GAGGCAATGGCACAGGCAGGCAGACAGGCGTTTACCTaGGGCTCAGACAAGGGCTCCCACTCCCTGGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: EAMAQAGRQAFT*GSDKGSHSLVG Trigger: ACCAACCAGGGAGTGGGAGCCCTTGTCTGAGCCCAAGGTAAACGCCTGTCTGCCTGCCTGTGCCATTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198029.5 |
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| CDS TCA 72 bp | ATCCAACGCCTTTCCGGAGAAGATCTTGCGGGTCTCTaGGAGCGACTCGGGTGCCATGAAGGCAGGTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: IQRLSGEDLAGL*ERLGCHEGRCA Trigger: GGCACACCTGCCTTCATGGCACCCGAGTCGCTCTCAGAGACCCGCAAGATCTTCTCCGGAAAGGCGTTGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS TCA 72 bp | TTCAAGAGTCTGCAAACCGGTAATGGAGACGTGGTGTaGCTCTACTGTGGGCCGCCGGGGCATCCGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: FKSLQTGNGDVV*LYCGPPGHPGR Trigger: TCTCCCCGGATGCCCCGGCGGCCCACAGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGACTCTTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| CDS GCA 72 bp | GTCCTGTTATCTCGGCGGCGGCGGCGTTCAAGAGTCTaGAAACCGGTAATGGAGACGTGGTGTGACTCTACT | + |
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Preference number: 6 (lower is better) Translates to: VLLSRRRRRSRV*KPVMETWCDST Trigger: AGTAGAGTCACACCACGTCTCCATTACCGGTTTGCAGACTCTTGAACGCCGCCGCCGCCGAGATAACAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199179.5 |
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| CDS CAA 72 bp | ATGGCCCAAACATCCAACGCCTTTCCGGAGAAGATCTaGCGGGTCTCTGAGAGCGACTCGGGTGCCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: MAQTSNAFPEKI*RVSESDSGAMK Trigger: CTTCATGGCACCCGAGTCGCTCTCAGAGACCCGCAAGATCTTCTCCGGAAAGGCGTTGGATGTTTGGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS CCA 72 bp | CACTCGGTGACCACGATGAAGGATTCCATGCCCAAGTaGATACTTAAGGATGAGAGTCCCCGCAGTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: HSVTTMKDSMPK*ILKDESPRSAS Trigger: TGAGGCACTGCGGGGACTCTCATCCTTAAGTATCCACTTGGGCATGGAATCCTTCATCGTGGTCACCGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000111668.8 ENSMUST00000196742.2 ENSMUST00000199599.2 ENSMUST00000200109.5 |
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| CDS CCA 72 bp | CTTCGAACGGGTTCCCGAATGAGCGCTTTCGAATCATaGTCTTTACCAGGATCACAGTTGCCAGGCTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LRTGSRMSAFES*SLPGSQLPGWE Trigger: TTCCCAGCCTGGCAACTGTGATCCTGGTAAAGACCATGATTCGAAAGCGCTCATTCGGGAACCCGTTCGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111668.8 ENSMUST00000198029.5 ENSMUST00000200109.5 |
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| CDS CAA 90 bp | GGGTTCCCGAATGAGCGCTTTCGAATCATGGTCTTTACCAGGATCTaGATTTCAGGCACCACAATCCTGGACTCTGGATTTTTGTCCAAC | + |
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Preference number: 6 (lower is better) Translates to: GFPNERFRIMVFTRI*ISGTTILDSGFLSN Trigger: GTTGGACAAAAATCCAGAGTCCAGGATTGTGGTGCCTGAAATCAAGATCCTGGTAAAGACCATGATTCGAAAGCGCTCATTCGGGAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197373.2 |
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| CDS TCA 72 bp | ATGAGCGCTTTCGAATCATGGTCTTTACCAGGATCTTaGTTTCAGGCACCACAATCCTGGACTCTGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: MSAFESWSLPGS*FQAPQSWTLDF Trigger: AAAATCCAGAGTCCAGGATTGTGGTGCCTGAAATCAAGATCCTGGTAAAGACCATGATTCGAAAGCGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197373.2 |
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| CDS CAA 72 bp | AATGAGCGCTTTCGAATCATGGTCTTTACCAGGATCTaGATTTCAGGCACCACAATCCTGGACTCTGGATTT | + |
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Preference number: 6 (lower is better) Translates to: NERFRIMVFTRI*ISGTTILDSGF Trigger: AAATCCAGAGTCCAGGATTGTGGTGCCTGAAATCAAGATCCTGGTAAAGACCATGATTCGAAAGCGCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197373.2 |
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