Pregenerated sensors for CAMK4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038128Ensembl transcript IDs: ENSMUST00000042868.6, ENSMUST00000234205.2, ENSMUST00000234654.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACGGCCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATaGGAGTGTGTCCTCTACCTCCAGCTGGTTTTAGCTGAGTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: KRPTRPFPLQVFEKS*ECVLYLQLVLAEFK Trigger: TTTGAACTCAGCTAAAACCAGCTGGAGGTAGAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGGCCGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR TCA 90 bp | TCAAAGTCTGTTTGCCATTTCACTTCAATATGTGCCACCAAAGGCTaGGAATGTTTAAGTGTTGCGTTGTTTGCTAGAAATTTCAAATTT | + |
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Preference number: 1 (lower is better) Translates to: SKSVCHFTSICATKG*ECLSVALFARNFKF Trigger: AAATTTGAAATTTCTAGCAAACAACGCAACACTTAAACATTCTCAGCCTTTGGTGGCACATATTGAAGTGAAATGGCAAACAGACTTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR-3UTR TCA 90 bp | TATAACCATCTTCAGCCTACTTTTAAAACGGCCTACTCGGCCCTTCCCACTGCAGCTTCCCCGCCTTGCTaGGGGACAGAGTGCATAAAA | + |
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Preference number: 2 (lower is better) Translates to: YNHLQPTFKTAYSALPTAASPPC*GTECIK Trigger: TTTTATGCACTCTGTCCCTCAGCAAGGCGGGGAAGC...TGCAGTGGGAAGGGCCGAGTAGGCCGTTTTAAAAGTAGGCTGAAGATGGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR-3UTR GCA 90 bp | CCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATGGGAGTGTGTCCTCCTAGTGGGTGTAGGATaGCTAAGCTTTCAAAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: PTRPFPLQVFEKSWECVLLVGVG*LSFQSL Trigger: CAGACTTTGAAAGCTTAGGCATCCTACACCCACTAG...GAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR-3UTR GCA 90 bp | ACTGTGGACTCAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTACATGGCTCGGCCCTTCCCACTaGAAGTATTTGAAAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: TVDSEPCKNDSTSQHCTWLGPSH*KYLKSH Trigger: ATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAG...CCATGTACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTGAGTCCACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR-3UTR TCA 90 bp | ACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACCATCTTCCCCACTGCAAGTATTTaGAAAGTCATGGGAGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: TVHGCFCTFYRLSFITIFPTASI*KVMGVC Trigger: ACACACTCCCATGACTTTTCAAATACTTGCAGTGGG...GAAGATGGTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACCATCTTCGTATTTGAAAAGTCATaGGAGTGTGTCCTCTACCTC | + |
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Preference number: 2 (lower is better) Translates to: TVHGCFCTFYRLSFITIFVFEKS*ECVLYL Trigger: GAGGTAGAGGACACACTCCCATGACTTTTCAAATAC...GAAGATGGTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR-3UTR GCA 90 bp | TCTCAACACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACCATAAAGCAAACACATaGACTGACATTAGGGTTACC | + |
|
Preference number: 2 (lower is better) Translates to: SQHCTWMFLHVLQVIFYNHKANT*TDIRVT Trigger: GGTAACCCTAATGTCAGTGCATGTGTTTGCTTTATG...GTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGTGTTGAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR-3UTR GCA 90 bp | ACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACCATCTTCTTTCACTTCAATATGTaGCACCAAAGGCTGAGAATG | + |
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Preference number: 2 (lower is better) Translates to: TVHGCFCTFYRLSFITIFFHFNM*HQRLRM Trigger: CATTCTCAGCCTTTGGTGGCACATATTGAAGTGAAA...GAAGATGGTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR CCA 72 bp | ACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATaGGAGTGTGTCCTCTACCTCCAGCTGGTTTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: TRPFPLQVFEKS*ECVLYLQLVLA Trigger: AGCTAAAACCAGCTGGAGGTAGAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR-3UTR CAA 90 bp | AAGAGGACTGTGGACTCAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTAAGGAATTGCCCTCTTaGAAGACTTCTAGTGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: KRTVDSEPCKNDSTSQHCKELPS*KTSSGC Trigger: ACACCCACTAGAAGTCTTCAAAGAGGGCAATTCCTT...ACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTGAGTCCACAGTCCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| 3UTR TCA 72 bp | GTTTGCCATTTCACTTCAATATGTGCCACCAAAGGCTaGGAATGTTTAAGTGTTGCGTTGTTTGCTAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: VCHFTSICATKG*ECLSVALFARN Trigger: ATTTCTAGCAAACAACGCAACACTTAAACATTCTCAGCCTTTGGTGGCACATATTGAAGTGAAATGGCAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR TCA 90 bp | CCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATGGGAGTGTGTCCTCTGGCCGCTTTACCTGTaGCCCATGGGTGTTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: PTRPFPLQVFEKSWECVLWPLYL*PMGVGG Trigger: CCCTCCAACACCCATGGGTCACAGGTAAAGCGGCCA...GAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATGGCCGCTTTACCTGTaGCCCATGGGTGTTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAWPLYL*PMGVGG Trigger: CCCTCCAACACCCATGGGTCACAGGTAAAGCGGCCA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAACCCCGTCCCAGCTCTaGCTCCACCTCGAAGAAATC | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSATPSQL*LHLEEI Trigger: GATTTCTTCGAGGTGGAGTCAGAGCTGGGACGGGGT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAACAGTTCTCCTCCTGTaGCCAGCTCAAGGACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSATVLLL*PAQGPG Trigger: GCCTGGTCCTTGAGCTGGTCACAGGAGGAGAACTGT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATGGTGTGGCTACTGCTaGCACTTCCCAGCCGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAWCGYC*HFPAEK Trigger: CTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR TCA 90 bp | TATAACCATCTTCAGCCTACTTTTAAAACGGCCTACTCGGCCCTTCCCACTGCAACCCCGTCCCAGCTCTaGCTCCACCTCGAAGAAATC | + |
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Preference number: 4 (lower is better) Translates to: YNHLQPTFKTAYSALPTATPSQL*LHLEEI Trigger: GATTTCTTCGAGGTGGAGTCAGAGCTGGGACGGGGT...TGCAGTGGGAAGGGCCGAGTAGGCCGTTTTAAAAGTAGGCTGAAGATGGTTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATCATCCTCTGGATCCTaGGGCACCATACTGGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSASSSGS*GTILEV Trigger: GACCTCCAGTATGGTGCCTCAGGATCCAGAGGATGA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATCTTGGATGCTGGTGTaGCTACTGCTGGCACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSASWMLV*LLLALP Trigger: GGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR TCA 90 bp | TATAACCATCTTCAGCCTACTTTTAAAACGGCCTACTCGGCCCTTCCCACTGCAGCTCAAGGACCAGGCTaGTTTCTGTGGGGGTTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YNHLQPTFKTAYSALPTAAQGPG*FLWGFR Trigger: TCGAAACCCCCACAGAAATCAGCCTGGTCCTTGAGC...TGCAGTGGGAAGGGCCGAGTAGGCCGTTTTAAAAGTAGGCTGAAGATGGTTATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGGGTGTTGGAGGGCTTaGAATGTAGTCAGCCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAGCWRA*NVVSRF Trigger: GAAACGGCTGACTACATTTCAAGCCCTCCAACACCC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGCCTTGTGGTTCTCTTaGATGCTGGTGTGGCTACTG | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAALWFS*MLVWLL Trigger: CAGTAGCCACACCAGCATCCAAGAGAACCACAAGGC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCACTTCAGCTTCTCCTCTaGATCCCTCTTCATCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSALQLLL*IPLHLW Trigger: CCAGAGATGAAGAGGGATTCAGAGGAGAAGCTGAAG...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | ACTGTGGACTCAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTACATGGTGGTGTGGCTACTGCTaGCACTTCCCAGCCGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: TVDSEPCKNDSTSQHCTWWCGYC*HFPAEK Trigger: CTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCA...CCATGTACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTGAGTCCACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGATCTGTGCTGTCCTTaGCATCTTGGGTTGAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSADLCCP*HLGLKV Trigger: CACCTTCAACCCAAGATGCCAAGGACAGCACAGATC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCACTTCCTCCTCAGTCATaGGGTCCATTTCTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSALPPQS*GPFLPP Trigger: TGGAGGAAGAAATGGACCCCATGACTGAGGAGGAAG...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR TCA 90 bp | CCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATGGGAGTGTGTCCTCCACACACTGTCTTCATaGGCACTTGATGTTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: PTRPFPLQVFEKSWECVLHTLSS*ALDVPQ Trigger: TTGTGGAACATCAAGTGCTCATGAAGACAGTGTGTG...GAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR GCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGGGTCCCCTTCTGTTTaGATCTGTACACAATGGATG | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAGSPSV*ICTQWM Trigger: CATCCATTGTGTACAGATGCAAACAGAAGGGGACCC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR GCA 90 bp | CCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATGGGAGTGTGTCCTCATCAGGGGCTGGAGTTaGATAAAGAAGATTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PTRPFPLQVFEKSWECVLIRGWS*IKKILW Trigger: CCAGAGAATCTTCTTTATGCAACTCCAGCCCCTGAT...GAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR GCA 90 bp | TATAACCATCTTCAGCCTACTTTTAAAACGGCCTACTCGGCCCTTCCCACTGCATTCCCAGAAGATCTGTaGTGTCCTTGGCATCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: YNHLQPTFKTAYSALPTAFPEDL*CPWHLG Trigger: CCCAAGATGCCAAGGACAGCACAGATCTTCTGGGAA...TGCAGTGGGAAGGGCCGAGTAGGCCGTTTTAAAAGTAGGCTGAAGATGGTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGGGTGCATCAGGGGCTaGAGTTGCATAAAGAAGATT | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAGCIRG*SCIKKI Trigger: AATCTTCTTTATGCAACTCCAGCCCCTGATGCACCC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATTTACCTGTGACCCATaGGTGTTGGAGGGCTTGAAA | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAFTCDP*VLEGLK Trigger: TTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAACTTGGTCCTCCTCTTaGTCCTCCTCTTGCATTTTC | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSATWSSS*SSSCIF Trigger: GAAAATGCAAGAGGAGGACCAAGAGGAGGACCAAGT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAATCCCTCTTCATCTCTaGGTCATCTGTTTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAIPLHL*VICFQL Trigger: GAGCTGGAAACAGATGACCCAGAGATGAAGAGGGAT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCACACACACTGTCTTCATaGGCACTTGATGTTCCACAA | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAHTLSS*ALDVPQ Trigger: TTGTGGAACATCAAGTGCTCATGAAGACAGTGTGTG...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR GCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAATCAGGGGCTGGAGTTaGATAAAGAAGATTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAIRGWS*IKKILW Trigger: CCAGAGAATCTTCTTTATGCAACTCCAGCCCCTGAT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR GCA 90 bp | CCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATGGGAGTGTGTCCTCTCTTGGTCCTCCTCTTaGATTTTCTTTCCCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PTRPFPLQVFEKSWECVLSWSSS*IFFPRR Trigger: TCTTCTGGGAAAGAAAATGCAAGAGGAGGACCAAGA...GAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGGTTTGAGGTCACGATaGACAATCCCATTTTCATGC | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAGLRSR*TIPFSC Trigger: GCATGAAAATGGGATTGTCCATCGTGACCTCAAACC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATTTTCTTTAACACTTTaGGAGCATAGGGCTTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAFSLTL*EHRASG Trigger: CCCAGAAGCCCTATGCTCTCAAAGTGTTAAAGAAAA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR GCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATCTTGGTCCTCCTCTTaGATTTTCTTTCCCAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSASWSSS*IFFPRR Trigger: TCTTCTGGGAAAGAAAATGCAAGAGGAGGACCAAGA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CCA 90 bp | CCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATGGGAGTGTGTCCTCATAAAGAAGATTCTCTaGTTTGAGGTCACGATGGAC | + |
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Preference number: 4 (lower is better) Translates to: PTRPFPLQVFEKSWECVLIKKIL*FEVTMD Trigger: GTCCATCGTGACCTCAAACCAGAGAATCTTCTTTAT...GAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR CCA 90 bp | AGGATGCCTAAGCTTTCAAAGTCTGTTTGCCATTTCACTTCAATATGTGCCACCGCCTTGTGGTTCTCTTaGATGCTGGTGTGGCTACTG | + |
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Preference number: 4 (lower is better) Translates to: RMPKLSKSVCHFTSICATALWFS*MLVWLL Trigger: CAGTAGCCACACCAGCATCCAAGAGAACCACAAGGC...GGTGGCACATATTGAAGTGAAATGGCAAACAGACTTTGAAAGCTTAGGCATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAAAAGTAGGATGTAGGTaGTTATTCCTACAGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAKVGCR*LFLQTT Trigger: TGTGGTCTGTAGGAATAATCACCTACATCCTACTTT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR TCA 90 bp | AGGATGCCTAAGCTTTCAAAGTCTGTTTGCCATTTCACTTCAATATGTGCCACCCTTCAGCTTCTCCTCTaGATCCCTCTTCATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RMPKLSKSVCHFTSICATLQLLL*IPLHLW Trigger: CCAGAGATGAAGAGGGATTCAGAGGAGAAGCTGAAG...GGTGGCACATATTGAAGTGAAATGGCAAACAGACTTTGAAAGCTTAGGCATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR CCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAATAAAGAAGATTCTCTaGTTTGAGGTCACGATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAIKKIL*FEVTMD Trigger: GTCCATCGTGACCTCAAACCAGAGAATCTTCTTTAT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGGACTGTGGACTCAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTTTTACCTGTGACCCATaGGTGTTGGAGGGCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRTVDSEPCKNDSTSQHCFTCDP*VLEGLK Trigger: TTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAA...ACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTGAGTCCACAGTCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR TCA 90 bp | TCTCAACACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACACAGTTCTCCTCCTGTaGCCAGCTCAAGGACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQHCTWMFLHVLQVIFYNTVLLL*PAQGPG Trigger: GCCTGGTCCTTGAGCTGGTCACAGGAGGAGAACTGT...GTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGTGTTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR TCA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGTCTTCATGAGCACTTaGTGTTCCACAATTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RITIVHIMLPRLAEGQSAVFMST*CSTIFE Trigger: TTCAAAAATTGTGGAACATCAAGTGCTCATGAAGAC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CCA 90 bp | AGGATGCCTAAGCTTTCAAAGTCTGTTTGCCATTTCACTTCAATATGTGCCACCGGGTGCATCAGGGGCTaGAGTTGCATAAAGAAGATT | + |
|
Preference number: 4 (lower is better) Translates to: RMPKLSKSVCHFTSICATGCIRG*SCIKKI Trigger: AATCTTCTTTATGCAACTCCAGCCCCTGATGCACCC...GGTGGCACATATTGAAGTGAAATGGCAAACAGACTTTGAAAGCTTAGGCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTACATGGATGTTTTTGCGATCTGTGCTGTCCTTaGCATCTTGGGTTGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSLVRMTQLLNTVHGCFCDLCCP*HLGLKV Trigger: CACCTTCAACCCAAGATGCCAAGGACAGCACAGATC...GCAAAAACATCCATGTACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGGACTGTGGACTCAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTTTTTCTTTAACACTTTaGGAGCATAGGGCTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRTVDSEPCKNDSTSQHCFSLTL*EHRASG Trigger: CCCAGAAGCCCTATGCTCTCAAAGTGTTAAAGAAAA...ACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTGAGTCCACAGTCCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR TCA 90 bp | ACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACCATCTTCTCATCCTCTGGATCCTaGGGCACCATACTGGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVHGCFCTFYRLSFITIFSSSGS*GTILEV Trigger: GACCTCCAGTATGGTGCCTCAGGATCCAGAGGATGA...GAAGATGGTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR GCA 90 bp | CAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTACATGGATGTTTTTGCGGGTCCCCTTCTGTTTaGATCTGTACACAATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QSLVRMTQLLNTVHGCFCGSPSV*ICTQWM Trigger: CATCCATTGTGTACAGATGCAAACAGAAGGGGACCC...GCAAAAACATCCATGTACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR TCA 90 bp | AAGAGGACTGTGGACTCAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTGTCTTCATGAGCACTTaGTGTTCCACAATTTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRTVDSEPCKNDSTSQHCVFMST*CSTIFE Trigger: TTCAAAAATTGTGGAACATCAAGTGCTCATGAAGAC...ACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTGAGTCCACAGTCCTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR CCA 90 bp | TCTCAACACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACATCCCTCTTCATCTCTaGGTCATCTGTTTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SQHCTWMFLHVLQVIFYNIPLHL*VICFQL Trigger: GAGCTGGAAACAGATGACCCAGAGATGAAGAGGGAT...GTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGTGTTGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS CCA 90 bp | CCGAGCTGGCCTTGTGGTTCTCTTGGATGCTGGTGTGGCTACTGCTaGCACTTCCCAGCCGAGAAGAGGCCACCACAGCCTTCACCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSWPCGSLGCWCGYC*HFPAEKRPPQPSPL Trigger: CAGCGGTGAAGGCTGTGGTGGCCTCTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS GCA 90 bp | GATCCGAGCTGGCCTTGTGGTTCTCTTGGATGCTGGTGTGGCTACTaGTGGCACTTCCCAGCCGAGAAGAGGCCACCACAGCCTTCACCG | + |
|
Preference number: 5 (lower is better) Translates to: DPSWPCGSLGCWCGY*WHFPAEKRPPQPSP Trigger: CGGTGAAGGCTGTGGTGGCCTCTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS CCA 90 bp | GAAGGTGGATCCGAGCTGGCCTTGTGGTTCTCTTGGATGCTGGTGTaGCTACTGCTGGCACTTCCCAGCCGAGAAGAGGCCACCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGGSELALWFSWMLV*LLLALPSREEATTA Trigger: GGCTGTGGTGGCCTCTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS CCA 90 bp | GGGTTGAAGGTGGATCCGAGCTGGCCTTGTGGTTCTCTTGGATGCTaGTGTGGCTACTGCTGGCACTTCCCAGCCGAGAAGAGGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: GLKVDPSWPCGSLGC*CGYCWHFPAEKRPP Trigger: TGGTGGCCTCTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS GCA 90 bp | CTTGGGTTGAAGGTGGATCCGAGCTGGCCTTGTGGTTCTCTTGGATaGTGGTGTGGCTACTGCTGGCACTTCCCAGCCGAGAAGAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGLKVDPSWPCGSLG*WCGYCWHFPAEKRP Trigger: TGGCCTCTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS TCA 90 bp | ATCTTTCTCCACCTCCTCGGACTGCAGCTTCCTCATCTCATCGGCTaGAGCCTCGGCCTCCACTTGGTCCTCCTCTTGGTCCTCCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFLHLLGLQLPHLIG*SLGLHLVLLLVLLL Trigger: CAAGAGGAGGACCAAGAGGAGGACCAAGTGGAGGCCGAGGCTTCAGCCGATGAGATGAGGAAGCTGCAGTCCGAGGAGGTGGAGAAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS CCA 90 bp | GCATCTTGGGTTGAAGGTGGATCCGAGCTGGCCTTGTGGTTCTCTTaGATGCTGGTGTGGCTACTGCTGGCACTTCCCAGCCGAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASWVEGGSELALWFS*MLVWLLLALPSREE Trigger: CTCTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS CCA 90 bp | CTGTCCTTGGCATCTTGGGTTGAAGGTGGATCCGAGCTGGCCTTGTaGTTCTCTTGGATGCTGGTGTGGCTACTGCTGGCACTTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSLASWVEGGSELAL*FSWMLVWLLLALPS Trigger: GCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS GCA 90 bp | GTCTCCTCCTCTTTTACACCTGCATCTTTCTCCACCTCCTCGGACTaGAGCTTCCTCATCTCATCGGCTGAAGCCTCGGCCTCCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSSSFTPASFSTSSD*SFLISSAEASASTW Trigger: CCAAGTGGAGGCCGAGGCTTCAGCCGATGAGATGAGGAAGCTGCAGTCCGAGGAGGTGGAGAAAGATGCAGGTGTAAAAGAGGAGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS CCA 90 bp | GATCTGTGCTGTCCTTGGCATCTTGGGTTGAAGGTGGATCCGAGCTaGCCTTGTGGTTCTCTTGGATGCTGGTGTGGCTACTGCTGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: DLCCPWHLGLKVDPS*PCGSLGCWCGYCWH Trigger: GTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAGCACAGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAAGCCTCGGCCTCCACTaGGTCCTCCTCTTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSASLGLH*VLLLVL Trigger: GAGGACCAAGAGGAGGACCAAGTGGAGGCCGAGGCT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | CCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATGGGAGTGTGTCCTCGGATCCGAGCTGGCCTaGTGGTTCTCTTGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTRPFPLQVFEKSWECVLGSELA*WFSWML Trigger: CAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCC...GAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS GCA 90 bp | TGGATCCTGAGGCACCATACTGGAGGTCTCCTCCTCTTTTACACCTaGATCTTTCTCCACCTCCTCGGACTGCAGCTTCCTCATCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: WILRHHTGGLLLFYT*IFLHLLGLQLPHLI Trigger: GATGAGATGAGGAAGCTGCAGTCCGAGGAGGTGGAGAAAGATGCAGGTGTAAAAGAGGAGGAGACCTCCAGTATGGTGCCTCAGGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGGATCCGAGCTGGCCTaGTGGTTCTCTTGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAGSELA*WFSWML Trigger: CAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCACCTTGGCATCTTGGGTaGAAGGTGGATCCGAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAPWHLG*KVDPSW Trigger: CCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGG...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS CCA 90 bp | GGTCCTCCTCTTGCATTTTCTTTCCCAGAAGATCTGTGCTGTCCTTaGCATCTTGGGTTGAAGGTGGATCCGAGCTGGCCTTGTGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GPPLAFSFPEDLCCP*HLGLKVDPSWPCGS Trigger: AGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAGCACAGATCTTCTGGGAAAGAAAATGCAAGAGGAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS CCA 90 bp | GGTCATCTGTTTCCAGCTCATCCTCTGGATCCTGAGGCACCATACTaGAGGTCTCCTCCTCTTTTACACCTGCATCTTTCTCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GHLFPAHPLDPEAPY*RSPPLLHLHLSPPP Trigger: AGGAGGTGGAGAAAGATGCAGGTGTAAAAGAGGAGGAGACCTCCAGTATGGTGCCTCAGGATCCAGAGGATGAGCTGGAAACAGATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGGCCTTGTGGTTCTCTaGGATGCTGGTGTGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAGLVVL*DAGVAT Trigger: AGTAGCCACACCAGCATCCAAGAGAACCACAAGGCC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS TCA 90 bp | CTCTTCATCTCTGGGTCATCTGTTTCCAGCTCATCCTCTGGATCCTaGGGCACCATACTGGAGGTCTCCTCCTCTTTTACACCTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LFISGSSVSSSSSGS*GTILEVSSSFTPAS Trigger: AGATGCAGGTGTAAAAGAGGAGGAGACCTCCAGTATGGTGCCTCAGGATCCAGAGGATGAGCTGGAAACAGATGACCCAGAGATGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS CCA 90 bp | AGCAGTGTCCATGTGAACAAAGTTGGCCGCTTTACCTGTGACCCATaGGTGTTGGAGGGCTTGAAATGTAGTCAGCCGTTTCTTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: SSVHVNKVGRFTCDP*VLEGLKCSQPFLGI Trigger: GATCCCAAGAAACGGCTGACTACATTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAAGCGGCCAACTTTGTTCACATGGACACTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAACCGCTGCCTTAAGCTaGCGCCGAGCATTGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSATAALS*RRALNS Trigger: AGAATTCAATGCTCGGCGCAAGCTTAAGGCAGCGGT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATGGGTGTTGGAGGGCTaGAAATGTAGTCAGCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAWVLEG*KCSQPF Trigger: AAACGGCTGACTACATTTCAAGCCCTCCAACACCCA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAAGATCTGTGCTGTCCTaGGCATCTTGGGTTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSARSVLS*ASWVEG Trigger: ACCTTCAACCCAAGATGCCAAGGACAGCACAGATCT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCACACTTGGTCCTCCTCTaGGTCCTCCTCTTGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAHLVLL*VLLLHF Trigger: AAAATGCAAGAGGAGGACCAAGAGGAGGACCAAGTG...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATGGGTCCCCTTCTGTTaGCATCTGTACACAATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAWVPFC*HLYTMD Trigger: ATCCATTGTGTACAGATGCAAACAGAAGGGGACCCA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCACATCAGGGGCTGGAGTaGCATAAAGAAGATTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAHQGLE*HKEDSL Trigger: CAGAGAATCTTCTTTATGCAACTCCAGCCCCTGATG...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGTAGTCAGCCGTTTCTaGGGATCCAAAACAATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAVVSRF*GSKTMS Trigger: GCTCATTGTTTTGGATCCCAAGAAACGGCTGACTAC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | TATAACCATCTTCAGCCTACTTTTAAAACGGCCTACTCGGCCCTTCCCACTGCACACTTGGTCCTCCTCTaGGTCCTCCTCTTGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: YNHLQPTFKTAYSALPTAHLVLL*VLLLHF Trigger: AAAATGCAAGAGGAGGACCAAGAGGAGGACCAAGTG...TGCAGTGGGAAGGGCCGAGTAGGCCGTTTTAAAAGTAGGCTGAAGATGGTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS TCA 90 bp | ACAAAGTTGGCCGCTTTACCTGTGACCCATGGGTGTTGGAGGGCTTaGAATGTAGTCAGCCGTTTCTTGGGATCCAAAACAATGAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TKLAALPVTHGCWRA*NVVSRFLGSKTMSF Trigger: AAAGCTCATTGTTTTGGATCCCAAGAAACGGCTGACTACATTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAAGCGGCCAACTTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | TATAACCATCTTCAGCCTACTTTTAAAACGGCCTACTCGGCCCTTCCCACTGCACATCAGGGGCTGGAGTaGCATAAAGAAGATTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YNHLQPTFKTAYSALPTAHQGLE*HKEDSL Trigger: CAGAGAATCTTCTTTATGCAACTCCAGCCCCTGATG...TGCAGTGGGAAGGGCCGAGTAGGCCGTTTTAAAAGTAGGCTGAAGATGGTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTACATGGATGTTTTTGCGGCCTTGTGGTTCTCTaGGATGCTGGTGTGGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: QSLVRMTQLLNTVHGCFCGLVVL*DAGVAT Trigger: AGTAGCCACACCAGCATCCAAGAGAACCACAAGGCC...GCAAAAACATCCATGTACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR CAA 90 bp | TCTCAACACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACAGCCTCGGCCTCCACTaGGTCCTCCTCTTGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQHCTWMFLHVLQVIFYNSLGLH*VLLLVL Trigger: GAGGACCAAGAGGAGGACCAAGTGGAGGCCGAGGCT...GTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGTGTTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR CAA 90 bp | CCTACTCGGCCCTTCCCACTGCAAGTATTTGAAAAGTCATGGGAGTGTGTCCTCAAAACAATGAGCTTTTaGACCAAGTCCTTGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PTRPFPLQVFEKSWECVLKTMSF*TKSLAF Trigger: AAATGCCAAGGACTTGGTCAAAAAGCTCATTGTTTT...GAGGACACACTCCCATGACTTTTCAAATACTTGCAGTGGGAAGGGCCGAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGTTCTCACAATCTTCTaGTCCACTGTTTTCTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAVLTIF*STVFFN Trigger: GTTAAAGAAAACAGTGGACAAGAAGATTGTGAGAAC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAGTTTCGAATATTTCCTaGAGTTTTATGATGTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAVSNIS*SFMMFG Trigger: CCCGAACATCATAAAACTCAAGGAAATATTCGAAAC...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCATTTTTGACCAAGTCCTaGGCATTTAAAGACACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAFLTKS*AFKDTS Trigger: TGAAGTGTCTTTAAATGCCAAGGACTTGGTCAAAAA...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CAA 90 bp | AGAATCACTATAGTGCATATCATGCTTCCCCGCCTTGCTGAGGGACAGAGTGCAAAAACAATGAGCTTTTaGACCAAGTCCTTGGCATTT | + |
|
Preference number: 5 (lower is better) Translates to: RITIVHIMLPRLAEGQSAKTMSF*TKSLAF Trigger: AAATGCCAAGGACTTGGTCAAAAAGCTCATTGTTTT...TGCACTCTGTCCCTCAGCAAGGCGGGGAAGCATGATATGCACTATAGTGATTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS-3UTR CAA 90 bp | AGGATGCCTAAGCTTTCAAAGTCTGTTTGCCATTTCACTTCAATATGTGCCACCGTAGTCAGCCGTTTCTaGGGATCCAAAACAATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RMPKLSKSVCHFTSICATVVSRF*GSKTMS Trigger: GCTCATTGTTTTGGATCCCAAGAAACGGCTGACTAC...GGTGGCACATATTGAAGTGAAATGGCAAACAGACTTTGAAAGCTTAGGCATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR CAA 90 bp | CAGAGCCTTGTAAGAATGACTCAACTTCTCAACACTGTACATGGATGTTTTTGCAGATCTGTGCTGTCCTaGGCATCTTGGGTTGAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QSLVRMTQLLNTVHGCFCRSVLS*ASWVEG Trigger: ACCTTCAACCCAAGATGCCAAGGACAGCACAGATCT...GCAAAAACATCCATGTACAGTGTTGAGAAGTTGAGTCATTCTTACAAGGCTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
||
| CDS-3UTR CAA 90 bp | TATAACCATCTTCAGCCTACTTTTAAAACGGCCTACTCGGCCCTTCCCACTGCAGTTCTCACAATCTTCTaGTCCACTGTTTTCTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: YNHLQPTFKTAYSALPTAVLTIF*STVFFN Trigger: GTTAAAGAAAACAGTGGACAAGAAGATTGTGAGAAC...TGCAGTGGGAAGGGCCGAGTAGGCCGTTTTAAAAGTAGGCTGAAGATGGTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS-3UTR CAA 90 bp | TATAACCATCTTCAGCCTACTTTTAAAACGGCCTACTCGGCCCTTCCCACTGCAGTTTCGAATATTTCCTaGAGTTTTATGATGTTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: YNHLQPTFKTAYSALPTAVSNIS*SFMMFG Trigger: CCCGAACATCATAAAACTCAAGGAAATATTCGAAAC...TGCAGTGGGAAGGGCCGAGTAGGCCGTTTTAAAAGTAGGCTGAAGATGGTTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS TCA 90 bp | TTTCTGTTCTCACAATCTTCTTGTCCACTGTTTTCTTTAACACTTTaGGAGCATAGGGCTTCTGGGTCCCCTTCTGTTTGCATCTGTACA | + |
|
Preference number: 5 (lower is better) Translates to: FLFSQSSCPLFSLTL*EHRASGSPSVCICT Trigger: TGTACAGATGCAAACAGAAGGGGACCCAGAAGCCCTATGCTCTCAAAGTGTTAAAGAAAACAGTGGACAAGAAGATTGTGAGAACAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS TCA 90 bp | TGTGGGGGTTTCGAATATTTCCTTGAGTTTTATGATGTTCGGGTGTaGGAGACGCAGGAGAACTCCTATTTCTGTTCTCACAATCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CGGFEYFLEFYDVRV*ETQENSYFCSHNLL Trigger: AAGAAGATTGTGAGAACAGAAATAGGAGTTCTCCTGCGTCTCTCACACCCGAACATCATAAAACTCAAGGAAATATTCGAAACCCCCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAACACTGTACATGGATGTTTTTGCACGTTCTACAGGTTATCTTTTATAACTGGGTGTTGGAGGGCTaGAAATGTAGTCAGCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SQHCTWMFLHVLQVIFYNWVLEG*KCSQPF Trigger: AAACGGCTGACTACATTTCAAGCCCTCCAACACCCA...GTTATAAAAGATAACCTGTAGAACGTGCAAAAACATCCATGTACAGTGTTGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042868.6 |
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| CDS TCA 72 bp | CACCTCCTCGGACTGCAGCTTCCTCATCTCATCGGCTaGAGCCTCGGCCTCCACTTGGTCCTCCTCTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HLLGLQLPHLIG*SLGLHLVLLLV Trigger: GACCAAGAGGAGGACCAAGTGGAGGCCGAGGCTTCAGCCGATGAGATGAGGAAGCTGCAGTCCGAGGAGGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS GCA 72 bp | CTCAGGTCCGTAGGCACAGCCTCGGAGAATCTCAGGTaGGCAGTACCCCGGGGTTCCACACACTGTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LRSVGTASENLR*AVPRGSTHCLH Trigger: ATGAAGACAGTGTGTGGAACCCCGGGGTACTGCGCACCTGAGATTCTCCGAGGCTGTGCCTACGGACCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS GCA 72 bp | TGGCCTTGTGGTTCTCTTGGATGCTGGTGTGGCTACTaGTGGCACTTCCCAGCCGAGAAGAGGCCACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: WPCGSLGCWCGY*WHFPAEKRPPQ Trigger: CTGTGGTGGCCTCTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS GCA 72 bp | AAGGTGGATCCGAGCTGGCCTTGTGGTTCTCTTGGATaGTGGTGTGGCTACTGCTGGCACTTCCCAGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: KVDPSWPCGSLG*WCGYCWHFPAE Trigger: CTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | GTGGATCCGAGCTGGCCTTGTGGTTCTCTTGGATGCTaGTGTGGCTACTGCTGGCACTTCCCAGCCGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VDPSWPCGSLGC*CGYCWHFPAEK Trigger: CTTCTCGGCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 90 bp | GTGCTGTCCTTGGCATCTTGGGTTGAAGGTGGATCCGAGCTGGCCTaGTGGTTCTCTTGGATGCTGGTGTGGCTACTGCTGGCACTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VLSLASWVEGGSELA*WFSWMLVWLLLALP Trigger: GGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | GTTGAAGGTGGATCCGAGCTGGCCTTGTGGTTCTCTTaGATGCTGGTGTGGCTACTGCTGGCACTTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VEGGSELALWFS*MLVWLLLALPS Trigger: GCTGGGAAGTGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | CCCCAAGTCCCGCGTCAGGGGCTTCCTCCTCAGTCATaGGGTCCATTTCTTCCTCCACACTCTTCAGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PQVPRQGLPPQS*GPFLPPHSSAS Trigger: AGAAGCTGAAGAGTGTGGAGGAAGAAATGGACCCCATGACTGAGGAGGAAGCCCCTGACGCGGGACTTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | GCATCTTGGGTTGAAGGTGGATCCGAGCTGGCCTTGTaGTTCTCTTGGATGCTGGTGTGGCTACTGCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASWVEGGSELAL*FSWMLVWLLLA Trigger: TGCCAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS GCA 72 bp | TCTTTTACACCTGCATCTTTCTCCACCTCCTCGGACTaGAGCTTCCTCATCTCATCGGCTGAAGCCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFTPASFSTSSD*SFLISSAEASA Trigger: GGCCGAGGCTTCAGCCGATGAGATGAGGAAGCTGCAGTCCGAGGAGGTGGAGAAAGATGCAGGTGTAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | TGTCCTTGGCATCTTGGGTTGAAGGTGGATCCGAGCTaGCCTTGTGGTTCTCTTGGATGCTGGTGTGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: CPWHLGLKVDPS*PCGSLGCWCGY Trigger: GTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 72 bp | TTGGCATCTTGGGTTGAAGGTGGATCCGAGCTGGCCTaGTGGTTCTCTTGGATGCTGGTGTGGCTACTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LASWVEGGSELA*WFSWMLVWLLL Trigger: CAGCAGTAGCCACACCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS GCA 72 bp | AGGCACCATACTGGAGGTCTCCTCCTCTTTTACACCTaGATCTTTCTCCACCTCCTCGGACTGCAGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RHHTGGLLLFYT*IFLHLLGLQLP Trigger: AGGAAGCTGCAGTCCGAGGAGGTGGAGAAAGATGCAGGTGTAAAAGAGGAGGAGACCTCCAGTATGGTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | TTCTTTCCCAGAAGATCTGTGCTGTCCTTGGCATCTTaGGTTGAAGGTGGATCCGAGCTGGCCTTGTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: FFPRRSVLSLAS*VEGGSELALWF Trigger: GAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAGCACAGATCTTCTGGGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 72 bp | GGCCGCTTTACCTGTGACCCATGGGTGTTGGAGGGCTaGAAATGTAGTCAGCCGTTTCTTGGGATCCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRFTCDPWVLEG*KCSQPFLGIQN Trigger: GTTTTGGATCCCAAGAAACGGCTGACTACATTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAAGCGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 72 bp | TTCCCAGAAGATCTGTGCTGTCCTTGGCATCTTGGGTaGAAGGTGGATCCGAGCTGGCCTTGTGGTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPEDLCCPWHLG*KVDPSWPCGSL Trigger: AAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAGCACAGATCTTCTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 90 bp | GCATTTTCTTTCCCAGAAGATCTGTGCTGTCCTTGGCATCTTGGGTaGAAGGTGGATCCGAGCTGGCCTTGTGGTTCTCTTGGATGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: AFSFPEDLCCPWHLG*KVDPSWPCGSLGCW Trigger: CCAGCATCCAAGAGAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAGCACAGATCTTCTGGGAAAGAAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 90 bp | TGGTCCTCCTCTTGCATTTTCTTTCCCAGAAGATCTGTGCTGTCCTaGGCATCTTGGGTTGAAGGTGGATCCGAGCTGGCCTTGTGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: WSSSCIFFPRRSVLS*ASWVEGGSELALWF Trigger: GAACCACAAGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAGCACAGATCTTCTGGGAAAGAAAATGCAAGAGGAGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 90 bp | CACAGCCTTCACCGCTGCCTTAAGCTTGCGCCGAGCATTGAATTCTaGAAGTTTCTTCTGAGCAGTGTCCATGTGAACAAAGTTGGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: HSLHRCLKLAPSIEF*KFLLSSVHVNKVGR Trigger: GCGGCCAACTTTGTTCACATGGACACTGCTCAGAAGAAACTTCAAGAATTCAATGCTCGGCGCAAGCTTAAGGCAGCGGTGAAGGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS TCA 72 bp | GCCGCTTTACCTGTGACCCATGGGTGTTGGAGGGCTTaGAATGTAGTCAGCCGTTTCTTGGGATCCAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: AALPVTHGCWRA*NVVSRFLGSKT Trigger: TGTTTTGGATCCCAAGAAACGGCTGACTACATTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAAGCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS TCA 72 bp | TCTGGGTCATCTGTTTCCAGCTCATCCTCTGGATCCTaGGGCACCATACTGGAGGTCTCCTCCTCTTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: SGSSVSSSSSGS*GTILEVSSSFT Trigger: TGTAAAAGAGGAGGAGACCTCCAGTATGGTGCCTCAGGATCCAGAGGATGAGCTGGAAACAGATGACCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS GCA 72 bp | GGTCCTCCTCTTGCATTTTCTTTCCCAGAAGATCTGTaGTGTCCTTGGCATCTTGGGTTGAAGGTGGATCCG | + |
|
Preference number: 6 (lower is better) Translates to: GPPLAFSFPEDL*CPWHLGLKVDP Trigger: CGGATCCACCTTCAACCCAAGATGCCAAGGACAGCACAGATCTTCTGGGAAAGAAAATGCAAGAGGAGGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | CTTGCATTTTCTTTCCCAGAAGATCTGTGCTGTCCTTaGCATCTTGGGTTGAAGGTGGATCCGAGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LAFSFPEDLCCP*HLGLKVDPSWP Trigger: AGGCCAGCTCGGATCCACCTTCAACCCAAGATGCCAAGGACAGCACAGATCTTCTGGGAAAGAAAATGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 72 bp | AACAAAGTTGGCCGCTTTACCTGTGACCCATGGGTGTaGGAGGGCTTGAAATGTAGTCAGCCGTTTCTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: NKVGRFTCDPWV*EGLKCSQPFLG Trigger: CCCAAGAAACGGCTGACTACATTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAAGCGGCCAACTTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 90 bp | GTCCATGTGAACAAAGTTGGCCGCTTTACCTGTGACCCATGGGTGTaGGAGGGCTTGAAATGTAGTCAGCCGTTTCTTGGGATCCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: VHVNKVGRFTCDPWV*EGLKCSQPFLGIQN Trigger: GTTTTGGATCCCAAGAAACGGCTGACTACATTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAAGCGGCCAACTTTGTTCACATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | CATGTGAACAAAGTTGGCCGCTTTACCTGTGACCCATaGGTGTTGGAGGGCTTGAAATGTAGTCAGCCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: HVNKVGRFTCDP*VLEGLKCSQPF Trigger: AAACGGCTGACTACATTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAAGCGGCCAACTTTGTTCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | TTTCCAGCTCATCCTCTGGATCCTGAGGCACCATACTaGAGGTCTCCTCCTCTTTTACACCTGCATCTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FPAHPLDPEAPY*RSPPLLHLHLS Trigger: AGAAAGATGCAGGTGTAAAAGAGGAGGAGACCTCCAGTATGGTGCCTCAGGATCCAGAGGATGAGCTGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 90 bp | AACAAAGTTGGCCGCTTTACCTGTGACCCATGGGTGTTGGAGGGCTaGAAATGTAGTCAGCCGTTTCTTGGGATCCAAAACAATGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: NKVGRFTCDPWVLEG*KCSQPFLGIQNNEL Trigger: AAGCTCATTGTTTTGGATCCCAAGAAACGGCTGACTACATTTCAAGCCCTCCAACACCCATGGGTCACAGGTAAAGCGGCCAACTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS TCA 72 bp | CAGGGGCTGGAGTTGCATAAAGAAGATTCTCTGGTTTaGGGTCACGATGGACAATCCCATTTTCATGCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGLELHKEDSLV*GHDGQSHFHAG Trigger: ACCTGCATGAAAATGGGATTGTCCATCGTGACCTCAAACCAGAGAATCTTCTTTATGCAACTCCAGCCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CAA 72 bp | CACCGCTGCCTTAAGCTTGCGCCGAGCATTGAATTCTaGAAGTTTCTTCTGAGCAGTGTCCATGTGAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: HRCLKLAPSIEF*KFLLSSVHVNK Trigger: TTTGTTCACATGGACACTGCTCAGAAGAAACTTCAAGAATTCAATGCTCGGCGCAAGCTTAAGGCAGCGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS CCA 72 bp | TGCATCAGGGGCTGGAGTTGCATAAAGAAGATTCTCTaGTTTGAGGTCACGATGGACAATCCCATTTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: CIRGWSCIKKIL*FEVTMDNPIFM Trigger: CATGAAAATGGGATTGTCCATCGTGACCTCAAACCAGAGAATCTTCTTTATGCAACTCCAGCCCCTGATGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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| CDS TCA 72 bp | TTCGAATATTTCCTTGAGTTTTATGATGTTCGGGTGTaGGAGACGCAGGAGAACTCCTATTTCTGTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: FEYFLEFYDVRV*ETQENSYFCSH Trigger: GTGAGAACAGAAATAGGAGTTCTCCTGCGTCTCTCACACCCGAACATCATAAAACTCAAGGAAATATTCGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042868.6 ENSMUST00000234205.2 ENSMUST00000234654.2 |
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