Pregenerated sensors for CAMK2N1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046447Ensembl transcript IDs: ENSMUST00000050918.4
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCTGAACCCAAGTCCAGTCTCCCAGCTTCAGTCTCCACAGGACTaGCGGCCTCCCAACCCAACAGGATGGCCCAAGCAAGCCTCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: NLNPSPVSQLQSPQD*RPPNPTGWPKQASG Trigger: CCCTGAGGCTTGCTTGGGCCATCCTGTTGGGTTGGGAGGCCGCCAGTCCTGTGGAGACTGAAGCTGGGAGACTGGACTTGGGTTCAGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 90 bp | GCCTGGGGTCAAGAGGGAAGACAGCCAGATTCAAGAAGAGGACTGTaGGCCTGGGGAAATGAAGTTGGCATCCGCTTGCATCCGCAGGCT | + |
|
Preference number: 1 (lower is better) Translates to: AWGQEGRQPDSRRGL*AWGNEVGIRLHPQA Trigger: AGCCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCTTCTTGAATCTGGCTGTCTTCCCTCTTGACCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 90 bp | CAGCTTCAGTCTCCACAGGACTGGCGGCCTCCCAACCCAACAGGATaGCCCAAGCAAGCCTCAGGGAATCCAGAAGGAGCCATTTGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: QLQSPQDWRPPNPTG*PKQASGNPEGAICK Trigger: TTTGCAAATGGCTCCTTCTGGATTCCCTGAGGCTTGCTTGGGCCATCCTGTTGGGTTGGGAGGCCGCCAGTCCTGTGGAGACTGAAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 90 bp | CTGCCAGTTCCAGCTCCCCCATCAGTCCCAGTAATGACCACAGGATaGAGAACCCCAGGCTGGGACCTGCTGAGGCTGTCAGACTTAAGA | + |
|
Preference number: 1 (lower is better) Translates to: LPVPAPPSVPVMTTG*RTPGWDLLRLSDLR Trigger: TCTTAAGTCTGACAGCCTCAGCAGGTCCCAGCCTGGGGTTCTTCATCCTGTGGTCATTACTGGGACTGATGGGGGAGCTGGAACTGGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 90 bp | CAGGAGCTGGCTGACCACATCCACACACTGCCTCCTTCTGACCCCTaGTGCAGTCTCAAGTTGTGCAGGATGATGGAGATGGGCAGAGCT | + |
|
Preference number: 1 (lower is better) Translates to: QELADHIHTLPPSDP*CSLKLCRMMEMGRA Trigger: AGCTCTGCCCATCTCCATCATCCTGCACAACTTGAGACTGCATCAGGGGTCAGAAGGAGGCAGTGTGTGGATGTGGTCAGCCAGCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 90 bp | TTTAACTTTTGTTTTTGTAGAGGAGCCCAGAGCCACCGCTACCGCTaGTACCACCACCACCACCACCTCCACCACCTCCACCTCCTCCTC | + |
|
Preference number: 1 (lower is better) Translates to: FNFCFCRGAQSHRYR*YHHHHHLHHLHLLL Trigger: GAGGAGGAGGTGGAGGTGGTGGAGGTGGTGGTGGTGGTGGTAGCAGCGGTAGCGGTGGCTCTGGGCTCCTCTACAAAAACAAAAGTTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 90 bp | AAGGCTGAAGGACAACCGTTGAAGCCGGAACAGAGCCAGTCTGTCTaGATCTTCATCCCAGATGGTGGGCTCTGGGTTCCAATCCTGCCT | + |
|
Preference number: 1 (lower is better) Translates to: KAEGQPLKPEQSQSV*IFIPDGGLWVPILP Trigger: AGGCAGGATTGGAACCCAGAGCCCACCATCTGGGATGAAGATGCAGACAGACTGGCTCTGTTCCGGCTTCAACGGTTGTCCTTCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 90 bp | CCTCTTCCTCCTCCTCCTCCTCTCCACCTCATCTGTCTCCCGGCCTaGCTTGAGACACAAGTTGTCGATTTCATCGCAGGTAGCAAGCTA | + |
|
Preference number: 1 (lower is better) Translates to: PLPPPPPLHLICLPA*LETQVVDFIAGSKL Trigger: TAGCTTGCTACCTGCGATGAAATCGACAACTTGTGTCTCAAGTCAGGCCGGGAGACAGATGAGGTGGAGAGGAGGAGGAGGAGGAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 90 bp | CACTGCCTCCTTCTGACCCCTGATGCAGTCTCAAGTTGTGCAGGATaGTGGAGATGGGCAGAGCTTGCGGAAGACACACCAACACAAGGA | + |
|
Preference number: 1 (lower is better) Translates to: HCLLLTPDAVSSCAG*WRWAELAEDTPTQG Trigger: TCCTTGTGTTGGTGTGTCTTCCGCAAGCTCTGCCCATCTCCATCATCCTGCACAACTTGAGACTGCATCAGGGGTCAGAAGGAGGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 90 bp | TACAGAAGTTCCAGTTCCGAGAGTAAGGCAGTCAGAGCTAGAACCTaGACCCAAGTCCAGTCTCCCAGCTTCAGTCTCCACAGGACTGGC | + |
|
Preference number: 1 (lower is better) Translates to: YRSSSSESKAVRART*TQVQSPSFSLHRTG Trigger: GCCAGTCCTGTGGAGACTGAAGCTGGGAGACTGGACTTGGGTTCAGGTTCTAGCTCTGACTGCCTTACTCTCGGAACTGGAACTTCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 90 bp | AGGCGCTTGGCAGGAATTACCCTCTCTGAGACACGCTATCTACTGTaGAGCCAGGTAACACCACCCATTCTTCTGGGCTGTTGTGAGTCT | + |
|
Preference number: 1 (lower is better) Translates to: RRLAGITLSETRYLL*SQVTPPILLGCCES Trigger: AGACTCACAACAGCCCAGAAGAATGGGTGGTGTTACCTGGCTGCACAGTAGATAGCGTGTCTCAGAGAGGGTAATTCCTGCCAAGCGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 90 bp | ACATTGGGAACAGCCAAATCAGCAGAGAAGGCAAGCACCTTCACGTaGTCGGTGCTGCTTTCGGGAAGTGGTTCAAACTCCAGAGCTATA | + |
|
Preference number: 1 (lower is better) Translates to: TLGTAKSAEKASTFT*SVLLSGSGSNSRAI Trigger: TATAGCTCTGGAGTTTGAACCACTTCCCGAAAGCAGCACCGACCACGTGAAGGTGCTTGCCTTCTCTGCTGATTTGGCTGTTCCCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 90 bp | CTATTAATAAATTTCAAAGTGCTTTCTCCCTCCTCCTCCTCCTCGTaGTTTTTGTCAGTAACTGTCACAGCCCGCCACTCTTCTTATTCT | + |
|
Preference number: 1 (lower is better) Translates to: LLINFKVLSPSSSSS*FLSVTVTARHSSYS Trigger: AGAATAAGAAGAGTGGCGGGCTGTGACAGTTACTGACAAAAAGCACGAGGAGGAGGAGGAGGGAGAAAGCACTTTGAAATTTATTAATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 90 bp | TTCCCAAAGCATCAGTCCGTAGAAAAGTTACTTTCTGCTTTAAAATaGGGTTCATTCAAAGATGACCCAAGTACAACAGTATCTACAGAG | + |
|
Preference number: 1 (lower is better) Translates to: FPKHQSVEKLLSALK*GSFKDDPSTTVSTE Trigger: CTCTGTAGATACTGTTGTACTTGGGTCATCTTTGAATGAACCCCATTTTAAAGCAGAAAGTAACTTTTCTACGGACTGATGCTTTGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 90 bp | TCAAGAAGAGGACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTaGCATCCGCAGGCTGGGCACTGCCAGTTCCAGCTCCCCCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: SRRGLCAWGNEVGIR*HPQAGHCQFQLPHQ Trigger: CTGATGGGGGAGCTGGAACTGGCAGTGCCCAGCCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCTTCTTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAGGACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTTGCATCCGCAGGCAGTCTCCACAGGACTaGCGGCCTCCCAACCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: EEDCAPGEMKLASACIRRQSPQD*RPPNPT Trigger: TGTTGGGTTGGGAGGCCGCCAGTCCTGTGGAGACTG...CCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | AACCCCAGGCTGGGACCTGCTGAGGCTGTCAGACTTAAGAAGGGGGATAAGACATTGCCCTCCTTTCCCTaGGGCCCCCTGGAGCTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: NPRLGPAEAVRLKKGDKTLPSFP*GPLELL Trigger: GAGGAGCTCCAGGGGGCCCCAGGGAAAGGAGGGCAA...TGTCTTATCCCCCTTCTTAAGTCTGACAGCCTCAGCAGGTCCCAGCCTGGGGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTTGCATCCGCAGGCTAAACATCCCAAGGGTTaGGGGAGGGGTAGGAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: RGLCAWGNEVGIRLHPQAKHPKG*GRGRRQ Trigger: TTGCCTCCTACCCCTCCCCCAACCCTTGGGATGTTT...AGCCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCCCCATCAGTCCCAGTAATGACCACAGGATGAAGAACCCCAGGCTGGGAATCTGTCTCCCGGCCTaGCTTGAGACACAAGTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: SSPISPSNDHRMKNPRLGICLPA*LETQVV Trigger: GACAACTTGTGTCTCAAGTCAGGCCGGGAGACAGAT...TCCCAGCCTGGGGTTCTTCATCCTGTGGTCATTACTGGGACTGATGGGGGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 90 bp | GCTCTGGGTTCCAATCCTGCCTCTGCAGCTATCAAACTGAGGCGCTaGGCAGGAATTACCCTCTCTGAGACACGCTATCTACTGTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: ALGSNPASAAIKLRR*AGITLSETRYLLCS Trigger: GCTGCACAGTAGATAGCGTGTCTCAGAGAGGGTAATTCCTGCCAAGCGCCTCAGTTTGATAGCTGCAGAGGCAGGATTGGAACCCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCCCCCATCAGTCCCAGTAATGACCACAGGATGAAGAACCCCAGGCTGGGAGGTACAGCAGGTGCTTaGAAACTTTTGGGACTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: SSPISPSNDHRMKNPRLGGTAGA*KLLGLP Trigger: GGGAAGTCCCAAAAGTTTCCAAGCACCTGCTGTACC...TCCCAGCCTGGGGTTCTTCATCCTGTGGTCATTACTGGGACTGATGGGGGAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAGGACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTTGCATCCGCAGGAGTGGGGTTTCTACATaGAAAACATCCCAAGGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: EEDCAPGEMKLASACIRRSGVST*KTSQGL Trigger: CAACCCTTGGGATGTTTTGCATGTAGAAACCCCACT...CCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | CCAACAGGATGGCCCAAGCAAGCCTCAGGGAATCCAGAAGGAGCCATTTGCAAATGCAAAACAGGCAGCTaGCGAGCCTTAAGAGAACCC | + |
|
Preference number: 2 (lower is better) Translates to: PTGWPKQASGNPEGAICKCKTGS*RALREP Trigger: GGGTTCTCTTAAGGCTCGCCAGCTGCCTGTTTTGCA...TTTGCAAATGGCTCCTTCTGGATTCCCTGAGGCTTGCTTGGGCCATCCTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | GAAGAGGACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTTGCATCCGCAGGAATAGCCCTGTGTGCTaGTTCAAGGTGCAACATACA | + |
|
Preference number: 2 (lower is better) Translates to: EEDCAPGEMKLASACIRRNSPVC*FKVQHT Trigger: TGTATGTTGCACCTTGAACCAGCACACAGGGCTATT...CCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR GCA 90 bp | AGAGGACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTTGCATCCGCAGGCTTTTTTGCAAATACCATaGAAAACAGGCAGCTGGCGA | + |
|
Preference number: 2 (lower is better) Translates to: RGLCAWGNEVGIRLHPQAFLQIP*KTGSWR Trigger: TCGCCAGCTGCCTGTTTTGCATGGTATTTGCAAAAA...AGCCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAAGGAGCCATTTGCAAAATTCAAAGTCCACTGACTCTGCCATTCTTAGGGGGGGTGGGGACCTCTTaGGGTCCAAAGTTGCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: PEGAICKIQSPLTLPFLGGVGTS*GPKLQT Trigger: TGTTTGCAACTTTGGACCTCAAGAGGTCCCCACCCC...CCCTAAGAATGGCAGAGTCAGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGG 50% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCTCCCCCATCAGTCCCAGTAATGACCACAGGATGAAGAACCCCAGGCTGGGATGTGCTGGTTCAAGGTaGAACATACAGAATAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSPISPSNDHRMKNPRLGCAGSR*NIQNRE Trigger: TTCTCTATTCTGTATGTTGCACCTTGAACCAGCACA...TCCCAGCCTGGGGTTCTTCATCCTGTGGTCATTACTGGGACTGATGGGGGAGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTCCTCTTCTTGACCCTAAGAGGCAGCAGCTGAGTTCATCGGTCTCTGCAGATGCTGCTTTCGGGAAGTaGTTCAAACTCCAGAGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: TPLLDPKRQQLSSSVSADAAFGK*FKLQSY Trigger: ATAGCTCTGGAGTTTGAACCACTTCCCGAAAGCAGC...ATCTGCAGAGACCGATGAACTCAGCTGCTGCCTCTTAGGGTCAAGAAGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 90 bp | GAAGACACACCAACACAAGGACTTTTAAAGGCTGAAGGACAACCGTaGAAGCCGGAACAGAGCCAGTCTGTCTGCATCTTCATCCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: EDTPTQGLLKAEGQP*KPEQSQSVCIFIPD Trigger: ATCTGGGATGAAGATGCAGACAGACTGGCTCTGTTCCGGCTTCAACGGTTGTCCTTCAGCCTTTAAAAGTCCTTGTGTTGGTGTGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | GGCTGGGACCTGCTGAGGCTGTCAGACTTAAGAAGGGGGATAAGACATTTGCCCGCGGTTCAAGATATTTaGCACTCTTGTGATTACATT | + |
|
Preference number: 2 (lower is better) Translates to: GWDLLRLSDLRRGIRHLPAVQDI*HSCDYI Trigger: AATGTAATCACAAGAGTGCCAAATATCTTGAACCGC...GGGCAAATGTCTTATCCCCCTTCTTAAGTCTGACAGCCTCAGCAGGTCCCAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR GCA 90 bp | AAGCAAGCCTCAGGGAATCCAGAAGGAGCCATTTGCAAAATTCAAAGTCCACTGGGCAAAGAGCTGTACTaGAACAAAGAAGCGCAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: KQASGNPEGAICKIQSPLGKELY*NKEAQA Trigger: AGCTTGCGCTTCTTTGTTGCAGTACAGCTCTTTGCC...CAGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGGATTCCCTGAGGCTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 90 bp | ATAAATTTCAAAGTGCTTTCTCCCTCCTCCTCCTCCTCGTGCTTTTaGTCAGTAACTGTCACAGCCCGCCACTCTTCTTATTCTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: INFKVLSPSSSSSCF*SVTVTARHSSYSFP Trigger: AGGGAAAGAATAAGAAGAGTGGCGGGCTGTGACAGTTACTGACAAAAAGCACGAGGAGGAGGAGGAGGGAGAAAGCACTTTGAAATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAAGGAGCCATTTGCAAAATTCAAAGTCCACTGACTCTGCCATTCTTAGGGAGAAATAGCCCTGTGTaGTGGTTCAAGGTGCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: PEGAICKIQSPLTLPFLGRNSPV*WFKVQH Trigger: ATGTTGCACCTTGAACCAGCACACAGGGCTATTTCT...CCCTAAGAATGGCAGAGTCAGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAAGGAGCCATTTGCAAAATTCAAAGTCCACTGACTCTGCCATTCTTAGGGGGGTTCATTCAAAGATaGCCCAAGTACAACAGTATC | + |
|
Preference number: 2 (lower is better) Translates to: PEGAICKIQSPLTLPFLGGFIQR*PKYNSI Trigger: GATACTGTTGTACTTGGGTCATCTTTGAATGAACCC...CCCTAAGAATGGCAGAGTCAGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CCA 90 bp | CCAGAAGGAGCCATTTGCAAAATTCAAAGTCCACTGACTCTGCCATTCTTAGGGAAATTATGTAAACATTaGGAACAGCCAAATCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PEGAICKIQSPLTLPFLGKLCKH*EQPNQQ Trigger: CTGCTGATTTGGCTGTTCCCAATGTTTACATAATTT...CCCTAAGAATGGCAGAGTCAGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 72 bp | CAGCCTTGGCCCAGGGCGCGGGGCAGCTCCAGGAGCTaGCTGACCACATCCACACACTGCCTCCTTCTGACC | + |
|
Preference number: 3 (lower is better) Translates to: QPWPRARGSSRS*LTTSTHCLLLT Trigger: GGTCAGAAGGAGGCAGTGTGTGGATGTGGTCAGCCAGCTCCTGGAGCTGCCCCGCGCCCTGGGCCAAGGCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | GACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTTaGATCCGCAGGCTGGGCACTGCCAGTTCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: DCAPGEMKLASA*IRRLGTASSSS Trigger: GGAGCTGGAACTGGCAGTGCCCAGCCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 72 bp | TCTCCACAGGACTGGCGGCCTCCCAACCCAACAGGATaGCCCAAGCAAGCCTCAGGGAATCCAGAAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SPQDWRPPNPTG*PKQASGNPEGA Trigger: GGCTCCTTCTGGATTCCCTGAGGCTTGCTTGGGCCATCCTGTTGGGTTGGGAGGCCGCCAGTCCTGTGGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CAA 90 bp | CGCTACCGCTGCTACCACCACCACCACCACCTCCACCACCTCCACCTCCTCCTCGTCTCCCGGCCTGACTaGAGACACAAGTTGTCGATT | + |
|
Preference number: 3 (lower is better) Translates to: RYRCYHHHHHLHHLHLLLVSRPD*RHKLSI Trigger: AATCGACAACTTGTGTCTCAAGTCAGGCCGGGAGAC...GAGGAGGAGGTGGAGGTGGTGGAGGTGGTGGTGGTGGTGGTAGCAGCGGTAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 72 bp | CCAGCTCCCCCATCAGTCCCAGTAATGACCACAGGATaGAGAACCCCAGGCTGGGACCTGCTGAGGCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: PAPPSVPVMTTG*RTPGWDLLRLS Trigger: TGACAGCCTCAGCAGGTCCCAGCCTGGGGTTCTTCATCCTGTGGTCATTACTGGGACTGATGGGGGAGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | GGCAGCTCCAGGAGCTGGCTGACCACATCCACACACTaGCTCCTTCTGACCCCTGATGCAGTCTCAAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: GSSRSWLTTSTH*LLLTPDAVSSC Trigger: ACAACTTGAGACTGCATCAGGGGTCAGAAGGAGGCAGTGTGTGGATGTGGTCAGCCAGCTCCTGGAGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGACCTGCTGAGGCTGTCAGACTTAAGAAGGGGGATAAGACATTTGCCCCACAGGACCTCTTCCTaGAGCCAAAACCCCTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GWDLLRLSDLRRGIRHLPHRTSS*SQNPSS Trigger: GGAGGAGGGGTTTTGGCTCAAGGAAGAGGTCCTGTG...GGGCAAATGTCTTATCCCCCTTCTTAAGTCTGACAGCCTCAGCAGGTCCCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | GGACAACCGTTGAAGCCGGAACAGAGCCAGTCTGTCTaGATCTTCATCCCAGATGGTGGGCTCTGGGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GQPLKPEQSQSV*IFIPDGGLWVP Trigger: TGGAACCCAGAGCCCACCATCTGGGATGAAGATGCAGACAGACTGGCTCTGTTCCGGCTTCAACGGTTGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 72 bp | CTCTGGGTTCCAATCCTGCCTCTGCAGCTATCAAACTaGGGCGCTTGGCAGGAATTACCCTCTCTGAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: LWVPILPLQLSN*GAWQELPSLRH Trigger: GTGTCTCAGAGAGGGTAATTCCTGCCAAGCGCCTCAGTTTGATAGCTGCAGAGGCAGGATTGGAACCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 72 bp | CTTCTGACCCCTGATGCAGTCTCAAGTTGTGCAGGATaGTGGAGATGGGCAGAGCTTGCGGAAGACACACCA | + |
|
Preference number: 3 (lower is better) Translates to: LLTPDAVSSCAG*WRWAELAEDTP Trigger: TGGTGTGTCTTCCGCAAGCTCTGCCCATCTCCATCATCCTGCACAACTTGAGACTGCATCAGGGGTCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 72 bp | GCTGACCACATCCACACACTGCCTCCTTCTGACCCCTaGTGCAGTCTCAAGTTGTGCAGGATGATGGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: ADHIHTLPPSDP*CSLKLCRMMEM Trigger: CATCTCCATCATCCTGCACAACTTGAGACTGCATCAGGGGTCAGAAGGAGGCAGTGTGTGGATGTGGTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 72 bp | ACAGCCAAATCAGCAGAGAAGGCAAGCACCTTCACGTaGTCGGTGCTGCTTTCGGGAAGTGGTTCAAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: TAKSAEKASTFT*SVLLSGSGSNS Trigger: GGAGTTTGAACCACTTCCCGAAAGCAGCACCGACCACGTGAAGGTGCTTGCCTTCTCTGCTGATTTGGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTCCTCTTCTTGACCCTAAGAGGCAGCAGCTGAGTTCATCGGTCTCTGCAGATAGGGGTGGGGACCTCTaGAGGTCCAAAGTTGCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: TPLLDPKRQQLSSSVSADRGGDL*RSKVAN Trigger: GTTTGCAACTTTGGACCTCAAGAGGTCCCCACCCCT...ATCTGCAGAGACCGATGAACTCAGCTGCTGCCTCTTAGGGTCAAGAAGAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | CAAGAGGGAAGACAGCCAGATTCAAGAAGAGGACTGTaGGCCTGGGGAAATGAAGTTGGCATCCGCTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: QEGRQPDSRRGL*AWGNEVGIRLH Trigger: ATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCTTCTTGAATCTGGCTGTCTTCCCTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | GCAGGAATTACCCTCTCTGAGACACGCTATCTACTGTaGAGCCAGGTAACACCACCCATTCTTCTGGGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: AGITLSETRYLL*SQVTPPILLGC Trigger: ACAGCCCAGAAGAATGGGTGGTGTTACCTGGCTGCACAGTAGATAGCGTGTCTCAGAGAGGGTAATTCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 72 bp | TATCAAACTGAGGCGCTTGGCAGGAATTACCCTCTCTaGGACACGCTATCTACTGTGCAGCCAGGTAACACC | + |
|
Preference number: 3 (lower is better) Translates to: YQTEALGRNYPL*DTLSTVQPGNT Trigger: GGTGTTACCTGGCTGCACAGTAGATAGCGTGTCTCAGAGAGGGTAATTCCTGCCAAGCGCCTCAGTTTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 72 bp | GGAGCCTATAGACCTTCAAGTCCAAAAGGGAGTGCCTaGGGTCAAGAGGGAAGACAGCCAGATTCAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GAYRPSSPKGSA*GQEGRQPDSRR Trigger: TCTTCTTGAATCTGGCTGTCTTCCCTCTTGACCCCAGGCACTCCCTTTTGGACTTGAAGGTCTATAGGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGGGACCTGCTGAGGCTGTCAGACTTAAGAAGGGGGATAAGACATTTGCCCTCCAGAAGGAGCCATTaGCAAAATTCAAAGTCCACT | + |
|
Preference number: 3 (lower is better) Translates to: GWDLLRLSDLRRGIRHLPSRRSH*QNSKST Trigger: AGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGGA...GGGCAAATGTCTTATCCCCCTTCTTAAGTCTGACAGCCTCAGCAGGTCCCAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | GGCTGTTGTGAGTCTGGTGTTCAGGGAAAGCTTTCTTaGTTCCCTGAGACCTCAGCTTCTTTGGTAACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: GCCESGVQGKLS*FPETSASLVTG Trigger: ACCAGTTACCAAAGAAGCTGAGGTCTCAGGGAAGCAAGAAAGCTTTCCCTGAACACCAGACTCACAACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | CTCAAGTTGTGCAGGATGATGGAGATGGGCAGAGCTTaGGGAAGACACACCAACACAAGGACTTTTAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LKLCRMMEMGRA*GRHTNTRTFKG Trigger: GCCTTTAAAAGTCCTTGTGTTGGTGTGTCTTCCGCAAGCTCTGCCCATCTCCATCATCCTGCACAACTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | CCCACTGTTGGTGTTAACCTGGGCAAAGAGCTGTACTaGAACAAAGAAGCGCAAGCTTTTCAGTTGTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: PTVGVNLGKELY*NKEAQAFQLSL Trigger: GAGAGACAACTGAAAAGCTTGCGCTTCTTTGTTGCAGTACAGCTCTTTGCCCAGGTTAACACCAACAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | CCCAAGCAAGCCTCAGGGAATCCAGAAGGAGCCATTTaGAAAATTCAAAGTCCACTGACTCTGCCATTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PKQASGNPEGAI*KIQSPLTLPFL Trigger: TAAGAATGGCAGAGTCAGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGGATTCCCTGAGGCTTGCTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR GCA 72 bp | ACAGTACCAGAAACCACATCCCTAAAGCTACCTTCTTaGCTGGCCTCTGTCCCTCTCGGCAGATTATTATTT | + |
|
Preference number: 3 (lower is better) Translates to: TVPETTSLKLPS*LASVPLGRLLF Trigger: AAATAATAATCTGCCGAGAGGGACAGAGGCCAGGCAAGAAGGTAGCTTTAGGGATGTGGTTTCTGGTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 72 bp | AAGCACCTTCACGTGGTCGGTGCTGCTTTCGGGAAGTaGTTCAAACTCCAGAGCTATAATTGCACAATATTT | + |
|
Preference number: 3 (lower is better) Translates to: KHLHVVGAAFGK*FKLQSYNCTIF Trigger: AAATATTGTGCAATTATAGCTCTGGAGTTTGAACCACTTCCCGAAAGCAGCACCGACCACGTGAAGGTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAAGCCTCAGGGAATCCAGAAGGAGCCATTTGCAAAATTCAAAGTCCACTGAGGAAGAGTTCTTTATaGTACACTGGAGAAATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KQASGNPEGAICKIQSPLRKSSL*YTGEIA Trigger: GGCTATTTCTCCAGTGTACAATAAAGAACTCTTCCT...CAGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGGATTCCCTGAGGCTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 72 bp | TCACATCCAAGTGCACAGATGAAATTATGTAAACATTaGGAACAGCCAAATCAGCAGAGAAGGCAAGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: SHPSAQMKLCKH*EQPNQQRRQAP Trigger: AGGTGCTTGCCTTCTCTGCTGATTTGGCTGTTCCCAATGTTTACATAATTTCATCTGTGCACTTGGATGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR TCA 72 bp | GTTACTTTCTGCTTTAAAATGGGGTTCATTCAAAGATaGCCCAAGTACAACAGTATCTACAGAGGTCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: VTFCFKMGFIQR*PKYNSIYRGHS Trigger: GGAATGACCTCTGTAGATACTGTTGTACTTGGGTCATCTTTGAATGAACCCCATTTTAAAGCAGAAAGTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CCA 72 bp | CATCAGTCCGTAGAAAAGTTACTTTCTGCTTTAAAATaGGGTTCATTCAAAGATGACCCAAGTACAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HQSVEKLLSALK*GSFKDDPSTTV Trigger: TACTGTTGTACTTGGGTCATCTTTGAATGAACCCCATTTTAAAGCAGAAAGTAACTTTTCTACGGACTGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 72 bp | GGACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTaGCATCCGCAGGCTGGGCACTGCCAGTTCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLCAWGNEVGIR*HPQAGHCQFQL Trigger: GAGCTGGAACTGGCAGTGCCCAGCCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| CDS-3UTR GCA 90 bp | AACCCCAGGCTGGGACCTGCTGAGGCTGTCAGACTTAAGAAGGGGGATAAGACAGGAGGCCGCTTGCTCTaGCCAGCCCCGAAGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NPRLGPAEAVRLKKGDKTGGRLL*PAPKKL Trigger: CAACTTCTTCGGGGCTGGGCAGAGCAAGCGGCCTCC...TGTCTTATCCCCCTTCTTAAGTCTGACAGCCTCAGCAGGTCCCAGCCTGGGGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| CDS-3UTR GCA 90 bp | TGGGAACAGCCAAATCAGCAGAGAAGGCAAGCACCTTCACGTGGTCGGTGCTGCTTAGACACCAGGGGGTaGCTTGTCGGTCATGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: WEQPNQQRRQAPSRGRCCLDTRG*LVGHGF Trigger: AAAACCATGACCGACAAGGCACCCCCTGGTGTCTAA...GCAGCACCGACCACGTGAAGGTGCTTGCCTTCTCTGCTGATTTGGCTGTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| CDS-3UTR CCA 90 bp | GGCAGATTATTATTTGAACAAAAAGCAGGCCCTAGCTCTAATCCTTTCCCCCAGCGGCACGAGAAGATCTaGCCCACGTCGCCGCCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GRLLFEQKAGPSSNPFPQRHEKI*PTSPPS Trigger: CGACGGCGGCGACGTGGGCCAGATCTTCTCGTGCCG...CTGGGGGAAAGGATTAGAGCTAGGGCCTGCTTTTTGTTCAAATAATAATCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| CDS-3UTR CCA 90 bp | GAAGAGGACTGTGCGCCTGGGGAAATGAAGTTGGCATCCGCTTGCATCCGCAGGGTGCCTTGTCGGTCATaGTTTTCAGCACGTCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: EEDCAPGEMKLASACIRRVPCRS*FSARHQ Trigger: TTGATGACGTGCTGAAAACCATGACCGACAAGGCAC...CCTGCGGATGCAAGCGGATGCCAACTTCATTTCCCCAGGCGCACAGTCCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| CDS-3UTR GCA 90 bp | CCAACAGGATGGCCCAAGCAAGCCTCAGGGAATCCAGAAGGAGCCATTTGCAAAAAGTTGTTGGTGTCCTaGAGGCGGCACGAGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PTGWPKQASGNPEGAICKKLLVS*RRHEKI Trigger: GATCTTCTCGTGCCGCCTGCAGGACACCAACAACTT...TTTGCAAATGGCTCCTTCTGGATTCCCTGAGGCTTGCTTGGGCCATCCTGTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 72 bp | CGGCCTTCTGGGGAGGGGAGCAGTACATTGCATTTCTaGGCTCTAATGGAGCCTATAGACCTTCAAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPSGEGSSTLHF*ALMEPIDLQVQ Trigger: TTGGACTTGAAGGTCTATAGGCTCCATTAGAGCCAAGAAATGCAATGTACTGCTCCCCTCCCCAGAAGGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 72 bp | TCCAATCCTGCCTCTGCAGCTATCAAACTGAGGCGCTaGGCAGGAATTACCCTCTCTGAGACACGCTATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SNPASAAIKLRR*AGITLSETRYL Trigger: TAGATAGCGTGTCTCAGAGAGGGTAATTCCTGCCAAGCGCCTCAGTTTGATAGCTGCAGAGGCAGGATTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 72 bp | CCAACACAAGGACTTTTAAAGGCTGAAGGACAACCGTaGAAGCCGGAACAGAGCCAGTCTGTCTGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTQGLLKAEGQP*KPEQSQSVCIF Trigger: GAAGATGCAGACAGACTGGCTCTGTTCCGGCTTCAACGGTTGTCCTTCAGCCTTTAAAAGTCCTTGTGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 72 bp | GCCCAAGCAAGCCTCAGGGAATCCAGAAGGAGCCATTaGCAAAATTCAAAGTCCACTGACTCTGCCATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: AQASLRESRRSH*QNSKSTDSAIL Trigger: AAGAATGGCAGAGTCAGTGGACTTTGAATTTTGCAAATGGCTCCTTCTGGATTCCCTGAGGCTTGCTTGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| 3UTR CAA 72 bp | CTTGCCTGGCCTCTGTCCCTCTCGGCAGATTATTATTaGAACAAAAAGCAGGCCCTAGCTCTAATCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAWPLSLSADYY*NKKQALALILS Trigger: GGAAAGGATTAGAGCTAGGGCCTGCTTTTTGTTCAAATAATAATCTGCCGAGAGGGACAGAGGCCAGGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGACCTGCTGAGGCTGTCAGACTTAAGAAGGGGGATAAGACATTTGCCCTCAATAACAACGCGCTaGCTCCGGCCGATCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GWDLLRLSDLRRGIRHLPSITTR*LRPIWP Trigger: GGGCCAGATCGGCCGGAGCAAGCGCGTTGTTATTGA...GGGCAAATGTCTTATCCCCCTTCTTAAGTCTGACAGCCTCAGCAGGTCCCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050918.4 |
||