Pregenerated sensors for CAMK1G (Mus musculus)
Ensembl gene IDs: ENSMUSG00000016179Ensembl transcript IDs: ENSMUST00000016323.11, ENSMUST00000163202.2, ENSMUST00000169907.8
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCTGGGTCTCCGTGCAGTGGGAAGCTAATCCTGGAGGAACGGACTaGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCATTCA | + |
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Preference number: 1 (lower is better) Translates to: AWVSVQWEANPGGTD*SCECSQAPGAAWHS Trigger: TGAATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR TCA 90 bp | CTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTGGACTTCCTGTaGGTGTCTGCCCAGGCAGCAACAGCCCTACTGCCTCAGACCAGC | + |
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Preference number: 1 (lower is better) Translates to: LRERPRLGLAPLDFL*VSAQAATALLPQTS Trigger: GCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR GCA 90 bp | ACGTCCAAGATTGGGGCTGGCTCCTCTGGACTTCCTGTGAGTGTCTaGCCAGGCAGCAACAGCCCTACTGCCTCAGACCAGCTGCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: TSKIGAGSSGLPVSV*PGSNSPTASDQLLW Trigger: CCAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CCA 90 bp | CTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTaGACTTCCTGTGAGTGTCTGCCCAGGCAGCAACAGCCCTACTGC | + |
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Preference number: 1 (lower is better) Translates to: LLVASENVQDWGWLL*TSCECLPRQQQPYC Trigger: GCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR TCA 90 bp | CAGATGAGCACTATCTATGGACACTGCATGGAGCCACTGCACGTATaGTGTGGGGAAGGGAATGGGCAGGTCGGGAGACCTGGAGGCTGG | + |
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Preference number: 1 (lower is better) Translates to: QMSTIYGHCMEPLHV*CGEGNGQVGRPGGW Trigger: CCAGCCTCCAGGTCTCCCGACCTGCCCATTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGTGCTCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR GCA 90 bp | AGCCCTACTGCCTCAGACCAGCTGCTTTGGCTATCTCTATTCCACTaGCCCCCTTCCTCAGGGCAGATGCCAGCTCAGAGAGGCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SPTASDQLLWLSLFH*PPSSGQMPAQRGRE Trigger: TTCTCTGCCTCTCTGAGCTGGCATCTGCCCTGAGGAAGGGGGGCAGTGGAATAGAGATAGCCAAAGCAGCTGGTCTGAGGCAGTAGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| 3UTR TCA 90 bp | CTTGAGGGTATGAGGCAAGAACACAGAGAGACAGAACAATGCACCTaGCTTTCAGGGGAAGGGAGGGAGCCAGAGGCAGGAGACCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: LEGMRQEHRETEQCT*LSGEGREPEAGDLD Trigger: ATCCAGGTCTCCTGCCTCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTCTGTGTTCTTGCCTCATACCCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR TCA 90 bp | TGGCCAGCCCATAAAGCTTTTCACAACAAACAACACGGACCCAGATaGGCACTATCTATGGACACTGCATGGAGCCACTGCACGTATGAT | + |
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Preference number: 1 (lower is better) Translates to: WPAHKAFHNKQHGPR*ALSMDTAWSHCTYD Trigger: ATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTTTATGGGCTGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR TCA 90 bp | CTGGATGACATGGAAATAGTCCCCGAATCCTTAATTAGGGATATATaGGGTGTGTGGCCAGCAGGGAGAGAAGGCTCACAGTCCATAGTC | + |
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Preference number: 1 (lower is better) Translates to: LDDMEIVPESLIRDI*GVWPAGREGSQSIV Trigger: GACTATGGACTGTGAGCCTTCTCTCCCTGCTGGCCACACACCTCATATATCCCTAATTAAGGATTCGGGGACTATTTCCATGTCATCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CCA 90 bp | AAGCTTTTCACAACAAACAACACGGACCCAGATGAGCACTATCTATaGACACTGCATGGAGCCACTGCACGTATGATGTGGGGAAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: KLFTTNNTDPDEHYL*TLHGATARMMWGRE Trigger: TTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCATCAGCAACAGCCCTACTaGCTCAGACCAGCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: GGTDWSCECSQAPGAAWHQQQPY*LRPAAL Trigger: CAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTG...ATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGAGGCAGGGGAGACCTGGAGGCTaGGATGCTGGAGGCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ERQNNAPDFQGKGGSQRQGRPGG*DAGGRQ Trigger: CTGCCTGCCTCCAGCATCCCAGCCTCCAGGTCTCCC...CTGCCTCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CAA 90 bp | CATGGAGGATGGGGGCACTGCTGTGAGATGGAGGCAAGGAGAGCTTaGGAGTGGCCTGGGTCTCCGTGCAGTGGGAAGCTAATCCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: HGGWGHCCEMEARRA*EWPGSPCSGKLILE Trigger: CTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCCAAAGCTCTCCTTGCCTCCATCTCACAGCAGTGCCCCCATCCTCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGCTTTGGAGTGGCCTGGGTCTCCGTGCAGTGGGAAGCTAATCCTGGAGGAACCTCTGGACTTCCTGTaGGTGTCTGCCCAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RALEWPGSPCSGKLILEEPLDFL*VSAQAA Trigger: TGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGG...TTCCTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCCAAAGCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR GCA 90 bp | ACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGCGAATCTTCCTCAGGGCAGATaGCAGCTCAGAGAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TGVVSAPRPLVQPGIHANLPQGR*QLREAE Trigger: CTCTGCCTCTCTGAGCTGGCATCTGCCCTGAGGAAG...ATTCGCATGAATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| 3UTR-3UTR GCA 90 bp | GGGAGGGAGCCAGAGGCAGGAGACCTGGATGACATGGAAATAGTCCCCGAATCCTGGCCTGGGTCTCCGTaGAGTGGGAAGCTAATCCTG | + |
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Preference number: 2 (lower is better) Translates to: GREPEAGDLDDMEIVPESWPGSP*SGKLIL Trigger: CAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCA...GGATTCGGGGACTATTTCCATGTCATCCAGGTCTCCTGCCTCTGGCTCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAGAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGAGGGAGACCTGGAGGCTaGGATGCTGGAGGCAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: TQRDRTMHLTFRGREGARGRPGG*DAGGRQ Trigger: CTGCCTGCCTCCAGCATCCCAGCCTCCAGGTCTCCC...TCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTCTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGGAAAGTGACACAGCCTaGCCAGCCCATAAAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PGGTDWSCECSQAPGAAWESDTA*PAHKAF Trigger: AAAAGCTTTATGGGCTGGCCAGGCTGTGTCACTTTC...CCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | CTAATCCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCACTCATCCTGCTTGTaGCCTCAGAGAACGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LILEERTGVVSAPRPLVQHSSCL*PQRTSK Trigger: CTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTG...CTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | CTAATCCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGACTGCACGTATGATGTaGGGAAGGGAATGGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LILEERTGVVSAPRPLVQTARMM*GREWAG Trigger: ACCTGCCCATTCCCTTCCCCACATCATACGTGCAGT...CTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGAGGCAGAGGCAAGGAGAGCTTTaGAGTGGCCTGGGTCTCCGT | + |
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Preference number: 2 (lower is better) Translates to: ERQNNAPDFQGKGGSQRQRQGEL*SGLGLR Trigger: ACGGAGACCCAGGCCACTCCAAAGCTCTCCTTGCCT...CTGCCTCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGCAGGGAGAGAAGGCTCACAGTCCATAGTCACAGCTTTCTCTAGTCCACCACCTCTGGACTTCCTGTaGGTGTCTGCCCAGGCAGCA | + |
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Preference number: 2 (lower is better) Translates to: PAGREGSQSIVTAFSSPPPLDFL*VSAQAA Trigger: TGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGG...TGGTGGACTAGAGAAAGCTGTGACTATGGACTGTGAGCCTTCTCTCCCTGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR TCA 90 bp | GAGAGCTTTGGAGTGGCCTGGGTCTCCGTGCAGTGGGAAGCTAATCCTGGAGGAGCAGAGCAGGGAGTCTaGGTTAGACTCCATATGGCT | + |
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Preference number: 2 (lower is better) Translates to: ESFGVAWVSVQWEANPGGAEQGV*VRLHMA Trigger: AGCCATATGGAGTCTAACTCAGACTCCCTGCTCTGC...TCCTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCCAAAGCTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGGAGCGAGTCTGCAGAGCAGGGAGTCTGAGTTAGACTCCATATGGCTTTGCCAGCAACAGCCCTACTaGCTCAGACCAGCTGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: AGASLQSRESELDSIWLCQQQPY*LRPAAL Trigger: CAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTG...GCAAAGCCATATGGAGTCTAACTCAGACTCCCTGCTCTGCAGACTCGCTCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGCAGGGAGAGAAGGCTCACAGTCCATAGTCACAGCTTTCTCTAGTCCACCACTTCCTGTGAGTGTCTaGCCAGGCAGCAACAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: PAGREGSQSIVTAFSSPPLPVSV*PGSNSP Trigger: AGGGCTGTTGCTGCCTGGGCAGACACTCACAGGAAG...TGGTGGACTAGAGAAAGCTGTGACTATGGACTGTGAGCCTTCTCTCCCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR GCA 90 bp | CTAATCCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGACTATCTATGGACACTaGATGGAGCCACTGCACGTA | + |
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Preference number: 2 (lower is better) Translates to: LILEERTGVVSAPRPLVQTIYGH*MEPLHV Trigger: TACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGT...CTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGAGGCAGCACTCATCCTGCTTGTaGCCTCAGAGAACGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: ERQNNAPDFQGKGGSQRQHSSCL*PQRTSK Trigger: CTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTG...CTGCCTCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR GCA 90 bp | TATCTATGGACACTGCATGGAGCCACTGCACGTATGATGTGGGGAAGGGAATGGCTTCCTGTGAGTGTCTaGCCAGGCAGCAACAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: YLWTLHGATARMMWGREWLPVSV*PGSNSP Trigger: AGGGCTGTTGCTGCCTGGGCAGACACTCACAGGAAG...CCATTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGCCAGAGGCAGGAGACCTGGATGACATGGAAATAGTCCCCGAATCCGATGAGCACTATCTATaGACACTGCATGGAGCCACT | + |
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Preference number: 2 (lower is better) Translates to: GREPEAGDLDDMEIVPESDEHYL*TLHGAT Trigger: AGTGGCTCCATGCAGTGTCCATAGATAGTGCTCATC...GGATTCGGGGACTATTTCCATGTCATCCAGGTCTCCTGCCTCTGGCTCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGAGGCAGGAAAGTGACACAGCCTaGCCAGCCCATAAAGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: ERQNNAPDFQGKGGSQRQESDTA*PAHKAF Trigger: AAAAGCTTTATGGGCTGGCCAGGCTGTGTCACTTTC...CTGCCTCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGCCTGGGTCTCCGTGCAGTGGGAAGCTAATCCTGGAGGAACGGACTGGGAGTTAGACTCCATATaGCTTTGCTTGAAGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: GVAWVSVQWEANPGGTDWELDSI*LCLKKV Trigger: CACTTTCTTCAAGCAAAGCCATATGGAGTCTAACTC...CCAGTCCGTTCCTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGCGAATGAGTTAGACTCCATATaGCTTTGCTTGAAGAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: TGVVSAPRPLVQPGIHANELDSI*LCLKKV Trigger: CACTTTCTTCAAGCAAAGCCATATGGAGTCTAACTC...ATTCGCATGAATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CCA 72 bp | TCCGTGCAGTGGGAAGCTAATCCTGGAGGAACGGACTaGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SVQWEANPGGTD*SCECSQAPGAA Trigger: GGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAGCTTCCCACTGCACGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR TCA 72 bp | CGTCCAAGATTGGGGCTGGCTCCTCTGGACTTCCTGTaGGTGTCTGCCCAGGCAGCAACAGCCCTACTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RPRLGLAPLDFL*VSAQAATALLP Trigger: AGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR GCA 72 bp | GAAGCTAATCCTGGAGGAACGGACTGGAGTTGTGAGTaGTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGC | + |
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Preference number: 3 (lower is better) Translates to: EANPGGTDWSCE*SQAPGAAWHSC Trigger: GCATGAATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CCA 72 bp | GCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTaGACTTCCTGTGAGTGTCTGCCCAGGCAGCAACAG | + |
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Preference number: 3 (lower is better) Translates to: ASENVQDWGWLL*TSCECLPRQQQ Trigger: CTGTTGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CCA 72 bp | CTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTaGCTCCTCTGGACTTCCTGTGAGTGTCTGCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: LLVASENVQDWG*LLWTSCECLPR Trigger: CCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CCA 72 bp | CTATGGACACTGCATGGAGCCACTGCACGTATGATGTaGGGAAGGGAATGGGCAGGTCGGGAGACCTGGAGG | + |
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Preference number: 3 (lower is better) Translates to: LWTLHGATARMM*GREWAGRETWR Trigger: CCTCCAGGTCTCCCGACCTGCCCATTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR GCA 72 bp | CAGCTTTCTCTAGTCCACCATGGAGGATGGGGGCACTaGTGTGAGATGGAGGCAAGGAGAGCTTTGGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QLSLVHHGGWGH*CEMEARRALEW Trigger: CCACTCCAAAGCTCTCCTTGCCTCCATCTCACAGCAGTGCCCCCATCCTCCATGGTGGACTAGAGAAAGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CCA 72 bp | AAGGAGAGCTTTGGAGTGGCCTGGGTCTCCGTGCAGTaGGAAGCTAATCCTGGAGGAACGGACTGGAGTTGT | + |
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Preference number: 3 (lower is better) Translates to: KESFGVAWVSVQ*EANPGGTDWSC Trigger: ACAACTCCAGTCCGTTCCTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCCAAAGCTCTCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR TCA 72 bp | ACTATCTATGGACACTGCATGGAGCCACTGCACGTATaGTGTGGGGAAGGGAATGGGCAGGTCGGGAGACCT | + |
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Preference number: 3 (lower is better) Translates to: TIYGHCMEPLHV*CGEGNGQVGRP Trigger: AGGTCTCCCGACCTGCCCATTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR GCA 72 bp | TCCTGTGAGTGTCTGCCCAGGCAGCAACAGCCCTACTaGCTCAGACCAGCTGCTTTGGCTATCTCTATTCCA | + |
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Preference number: 3 (lower is better) Translates to: SCECLPRQQQPY*LRPAALAISIP Trigger: TGGAATAGAGATAGCCAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR TCA 72 bp | ATGAGGCAAGAACACAGAGAGACAGAACAATGCACCTaGCTTTCAGGGGAAGGGAGGGAGCCAGAGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: MRQEHRETEQCT*LSGEGREPEAG Trigger: TCCTGCCTCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTCTGTGTTCTTGCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR GCA 72 bp | CAGAGCAGGGAGTCTGAGTTAGACTCCATATGGCTTTaGTTGAAGAAAGTGACACAGCCTGGCCAGCCCATA | + |
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Preference number: 3 (lower is better) Translates to: QSRESELDSIWL*LKKVTQPGQPI Trigger: TATGGGCTGGCCAGGCTGTGTCACTTTCTTCAAGCAAAGCCATATGGAGTCTAACTCAGACTCCCTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR TCA 72 bp | CAGATAGGCAGGAGCGAGTCTGCAGAGCAGGGAGTCTaGGTTAGACTCCATATGGCTTTGCTTGAAGAAAGT | + |
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Preference number: 3 (lower is better) Translates to: QIGRSESAEQGV*VRLHMALLEES Trigger: ACTTTCTTCAAGCAAAGCCATATGGAGTCTAACTCAGACTCCCTGCTCTGCAGACTCGCTCCTGCCTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| 3UTR CCA 72 bp | ACAACAAACAACACGGACCCAGATGAGCACTATCTATaGACACTGCATGGAGCCACTGCACGTATGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TTNNTDPDEHYL*TLHGATARMMW Trigger: CCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGTGCTCATCTGGGTCCGTGTTGTTTGTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGGGAGAGAAGGCTCACAGTCCATAGTCACAGCTTTCTCTAGTCCACCATGGAGACTCCATATGGCTTaGCTTGAAGAAAGTGACACA | + |
|
Preference number: 3 (lower is better) Translates to: AGREGSQSIVTAFSSPPWRLHMA*LEESDT Trigger: TGTGTCACTTTCTTCAAGCAAAGCCATATGGAGTCT...CCATGGTGGACTAGAGAAAGCTGTGACTATGGACTGTGAGCCTTCTCTCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| 3UTR TCA 72 bp | ATGGAAATAGTCCCCGAATCCTTAATTAGGGATATATaGGGTGTGTGGCCAGCAGGGAGAGAAGGCTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: MEIVPESLIRDI*GVWPAGREGSQ Trigger: CTGTGAGCCTTCTCTCCCTGCTGGCCACACACCTCATATATCCCTAATTAAGGATTCGGGGACTATTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| 3UTR TCA 72 bp | CATAAAGCTTTTCACAACAAACAACACGGACCCAGATaGGCACTATCTATGGACACTGCATGGAGCCACTGC | + |
|
Preference number: 3 (lower is better) Translates to: HKAFHNKQHGPR*ALSMDTAWSHC Trigger: GCAGTGGCTCCATGCAGTGTCCATAGATAGTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| 3UTR CCA 72 bp | CTCCATATGGCTTTGCTTGAAGAAAGTGACACAGCCTaGCCAGCCCATAAAGCTTTTCACAACAAACAACAC | + |
|
Preference number: 3 (lower is better) Translates to: LHMALLEESDTA*PAHKAFHNKQH Trigger: GTGTTGTTTGTTGTGAAAAGCTTTATGGGCTGGCCAGGCTGTGTCACTTTCTTCAAGCAAAGCCATATGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| 3UTR TCA 72 bp | TCCATTTTATTTGAGCACAACACAGAGCACGAAGCTTaGGGGTATGAGGCAAGAACACAGAGAGACAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: SILFEHNTEHEA*GYEARTQRDRT Trigger: TGTTCTGTCTCTCTGTGTTCTTGCCTCATACCCTCAAGCTTCGTGCTCTGTGTTGTGCTCAAATAAAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | ACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGCGAATAGCCACAGGGCCCCGTaGCTAGGGGGCCCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGVVSAPRPLVQPGIHANSHRAP*LGGPVA Trigger: TGCAACAGGGCCCCCTAGCCACGGGGCCCTGTGGCT...ATTCGCATGAATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCTGCCCAGGCAGCAACAGCCCTACTGCCTCAGACCAGCTGCTTTGGCTCCCGGCAGTGGGTGCTaGCACCAGCCTTCACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ECLPRQQQPYCLRPAALAPGSGC*HQPSLV Trigger: TACCAGTGAAGGCTGGTGGCAGCACCCACTGCCGGG...AGCCAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCAGGCCACTCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGCACCCCGGCAGTGGGTaGTGCCACCAGCCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RQAGHSSCLWPQRTSKIGHPGSG*CHQPSL Trigger: CAGTGAAGGCTGGTGGCAGCACCCACTGCCGGGGTG...CCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTGGCCTGCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGCAGGCAGGCCACTCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATAGACACACCCCAGTCTaGCCACCCCGGCAGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEAGRPLILLVASENVQDRHTPV*PPRQWV Trigger: CACCCACTGCCGGGGTGGGCAGACTGGGGTGTGTCT...ATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTGGCCTGCCTGCCTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCAGAAACAAGCTGCATaGCCAGGTAGTAGTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGGTDWSCECSQAPGAAWQKQAA*PGSSGW Trigger: CCACCCACTACTACCTGGTCATGCAGCTTGTTTCTG...CCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | CTAATCCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGGCTAGGGGGCCCTGTTaGATGGGCACTAGGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: LILEERTGVVSAPRPLVQARGPC*MGTRLL Trigger: CAGTAGCCTAGTGCCCATGCAACAGGGCCCCCTAGC...CTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR GCA 90 bp | GGGAGGGAGCCAGAGGCAGGAGACCTGGATGACATGGAAATAGTCCCCGAATCCCCCGGCAGTGGGTGCTaGCACCAGCCTTCACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GREPEAGDLDDMEIVPESPGSGC*HQPSLV Trigger: TACCAGTGAAGGCTGGTGGCAGCACCCACTGCCGGG...GGATTCGGGGACTATTTCCATGTCATCCAGGTCTCCTGCCTCTGGCTCCCTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | TGTGAGTGTCTGCCCAGGCAGCAACAGCCCTACTGCCTCAGACCAGCTGCTTTGCTGGGCCAGCACTTCTaGAGCCACGTAGCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CECLPRQQQPYCLRPAALLGQHF*SHVAWG Trigger: ACCCCAGGCTACGTGGCTCCAGAAGTGCTGGCCCAG...CAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGTCTGCCCAGGCAGCAACAGCCCTACTGCCTCAGACCAGCTGCTTTGGCTTGCAGTTTCCTCATGTaGTGCACCACCGCAGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: ECLPRQQQPYCLRPAALACSFLM*CTTAAA Trigger: CGCAGCTGCGGTGGTGCATCACATGAGGAAACTGCA...AGCCAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR TCA 90 bp | AGGCAGGCAGGCCACTCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGGATGGGGGCCTCTGTaGTGGAGCTGTCATGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RQAGHSSCLWPQRTSKIGGWGPL*WSCHGS Trigger: ACTCCCATGACAGCTCCATCACAGAGGCCCCCATCC...CCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTGGCCTGCCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCCAGGTAGTAGTGGGTaGTGCTCTCATAGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGTDWSCECSQAPGAAWPGSSG*CSHRCP Trigger: AGGACATCTATGAGAGCACCACCCACTACTACCTGG...CCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | CTAATCCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGGCAGACAAGACCTGCTaGATGACCAGGCTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LILEERTGVVSAPRPLVQADKTC*MTRLAS Trigger: GGATGCCAGCCTGGTCATCCAGCAGGTCTTGTCTGC...CTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | GCTAATCCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCATCTCATTCTCTAGGCTaGTGTCCCGGAAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ANPGGTDWSCECSQAPGASHSLG*CPGRLV Trigger: CACCAGCCTTCCGGGACAGCAGCCTAGAGAATGAGA...TGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | GAGCACTATCTATGGACACTGCATGGAGCCACTGCACGTATGATGTGGGGAAGGCACCCCGGCAGTGGGTaGTGCCACCAGCCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: EHYLWTLHGATARMMWGRHPGSG*CHQPSL Trigger: CAGTGAAGGCTGGTGGCAGCACCCACTGCCGGGGTG...CCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCAGGGAGAGAAGGCTCACAGTCCATAGTCACAGCTTTCTCTAGTCCACCAAGACACACCCCAGTCTaGCCACCCCGGCAGTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAGREGSQSIVTAFSSPPRHTPV*PPRQWV Trigger: CACCCACTGCCGGGGTGGGCAGACTGGGGTGTGTCT...TGGTGGACTAGAGAAAGCTGTGACTATGGACTGTGAGCCTTCTCTCCCTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGCCAGAGGCAGGAGACCTGGATGACATGGAAATAGTCCCCGAATCCGCAGACAAGACCTGCTaGATGACCAGGCTGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GREPEAGDLDDMEIVPESADKTC*MTRLAS Trigger: GGATGCCAGCCTGGTCATCCAGCAGGTCTTGTCTGC...GGATTCGGGGACTATTTCCATGTCATCCAGGTCTCCTGCCTCTGGCTCCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGGAGAGAAGGCTCACAGTCCATAGTCACAGCTTTCTCTAGTCCACCATGGCTGGGCCAGCACTTCTaGAGCCACGTAGCCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGREGSQSIVTAFSSPPWLGQHF*SHVAWG Trigger: ACCCCAGGCTACGTGGCTCCAGAAGTGCTGGCCCAG...CCATGGTGGACTAGAGAAAGCTGTGACTATGGACTGTGAGCCTTCTCTCCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | CAAGATTGGGGCTGGCTCCTCTGGACTTCCTGTGAGTGTCTGCCCAGGCAGCAACTGGAGGCTGACAGATaGATAGATGTCCCGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDWGWLLWTSCECLPRQQLEADR*IDVPVQ Trigger: CTGCACCGGGACATCTATCCATCTGTCAGCCTCCAG...TTGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCAATCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGCGAATAGGCAGGTACTATGATAGCAGGGGACACAGGTaGCCTGTTCTCCACCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGPWCSLAFMRIGRYYDSRGHR*PVLHLL Trigger: CAAGAGGTGGAGAACAGGCCACCTGTGTCCCCTGCT...ATCATAGTACCTGCCTATTCGCATGAATGCCAGGCTGCACCAGGGGCCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTGTCTGCCCAGGCAGCAACAGCCCTACTGCCTCAGACCAGCTGCTTTGCAGAAACAAGCTGCATaGCCAGGTAGTAGTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CECLPRQQQPYCLRPAALQKQAA*PGSSGW Trigger: CCACCCACTACTACCTGGTCATGCAGCTTGTTTCTG...CAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR TCA 90 bp | CTAATCCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGTCTGAATCTGGAGGCTaGCAGATGGATAGATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LILEERTGVVSAPRPLVQSESGG*QMDRCP Trigger: GGGACATCTATCCATCTGTCAGCCTCCAGATTCAGA...CTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | TCCTGTGAGTGTCTGCCCAGGCAGCAACAGCCCTACTGCCTCAGACCAGCTGCTGGTAGTAGTGGGTGGTaGTCTCATAGATGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCECLPRQQQPYCLRPAAGSSGW*SHRCPP Trigger: TGGAGGACATCTATGAGAGCACCACCCACTACTACC...AGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | CCAGATGAGCACTATCTATGGACACTGCATGGAGCCACTGCACGTATGATGTGGGTGCAGGAAGGGGTGTaGTTGGGTCCAGGATGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDEHYLWTLHGATARMMWVQEGV*LGPGWG Trigger: CCCCCATCCTGGACCCAAGCACACCCCTTCCTGCAC...CCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGTGCTCATCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR CCA 90 bp | GGGAGGGAGCCAGAGGCAGGAGACCTGGATGACATGGAAATAGTCCCCGAATCCGGTGTACCGTTCGTTTaGGTCCTTCTCCAGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: GREPEAGDLDDMEIVPESGVPFV*VLLQQM Trigger: CATCTGCTGGAGAAGGACCCAAACGAACGGTACACC...GGATTCGGGGACTATTTCCATGTCATCCAGGTCTCCTGCCTCTGGCTCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | TCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTGGACTGGAGGCTGACAGATaGATAGATGTCCCGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCLWPQRTSKIGAGSSGLEADR*IDVPVQ Trigger: CTGCACCGGGACATCTATCCATCTGTCAGCCTCCAG...TCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | CATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTGGACCAATATTTAGACAGCTaGAGCAGCAGCCACAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HPACGLRERPRLGLAPLDQYLDS*SSSHRA Trigger: GGCCCTGTGGCTGCTGCTCCAGCTGTCTAAATATTG...GTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR TCA 90 bp | GGGAGGGAGCCAGAGGCAGGAGACCTGGATGACATGGAAATAGTCCCCGAATCCTCTGAATCTGGAGGCTaGCAGATGGATAGATGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GREPEAGDLDDMEIVPESSESGG*QMDRCP Trigger: GGGACATCTATCCATCTGTCAGCCTCCAGATTCAGA...GGATTCGGGGACTATTTCCATGTCATCCAGGTCTCCTGCCTCTGGCTCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | GCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTGGACTTCCTGGGTAGTAGTGGGTGGTaGTCTCATAGATGTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACGLRERPRLGLAPLDFLGSSGW*SHRCPP Trigger: TGGAGGACATCTATGAGAGCACCACCCACTACTACC...CAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGAATGCACCACCGCAGCTaGGTTGAAGGCTTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQRDRTMHLTFRGREGARMHHRS*VEGLPP Trigger: TGGAGGCAAGCCTTCAACGCAGCTGCGGTGGTGCAT...TCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR GCA 90 bp | AACAGCCCTACTGCCTCAGACCAGCTGCTTTGGCTATCTCTATTCCACTGCCCCCGGACACTGGGGCTGTaGAGGTTCATGTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSPTASDQLLWLSLFHCPRTLGL*RFMCSF Trigger: GAAACTGCACATGAACCTGCACAGCCCCAGTGTCCG...GGGGCAGTGGAATAGAGATAGCCAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR CCA 90 bp | AGGCAGGCAGGCCACTCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGCCAGGTAGTAGTGGGTaGTGCTCTCATAGATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQAGHSSCLWPQRTSKIGPGSSG*CSHRCP Trigger: AGGACATCTATGAGAGCACCACCCACTACTACCTGG...CCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTGGCCTGCCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCAGCCCATAAAGCTTTTCACAACAAACAACACGGACCCAGATGAGCACTGGAGCCACGTAGCCTaGGGTCCCACAAGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGQPIKLFTTNNTDPDEHWSHVA*GPTSCG Trigger: TCCACAGCTTGTGGGACCCCAGGCTACGTGGCTCCA...GTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTTTATGGGCTGGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGCTGGCTCCTCTGGACTTCCTGTGAGTGTCTGCCCAGGCAGCAACAGCCCTCCTTCTCCAGCAGATaGCAAATAAAATCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WGWLLWTSCECLPRQQQPSFSSR*QIKSLA Trigger: AGCCAAGGATTTTATTTGCCATCTGCTGGAGAAGGA...GGGCTGTTGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR TCA 90 bp | AACAGCCCTACTGCCTCAGACCAGCTGCTTTGGCTATCTCTATTCCACTGCCCCACAAGACCTGCTGGATaGCCAGGCTGGCATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NSPTASDQLLWLSLFHCPTRPAG*PGWHPF Trigger: AAAAGGATGCCAGCCTGGTCATCCAGCAGGTCTTGT...GGGGCAGTGGAATAGAGATAGCCAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | ACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGCGAATTTCCCAGTCACTCTTTaGTTCACCAGGAACACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGVVSAPRPLVQPGIHANFPVTL*FTRNTS Trigger: AGAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAA...ATTCGCATGAATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGATCTCATTCTCTAGGCTaGTGTCCCGGAAGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQRDRTMHLTFRGREGARSHSLG*CPGRLV Trigger: CACCAGCCTTCCGGGACAGCAGCCTAGAGAATGAGA...TCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGAGCTGCGTTGAAGGCTTaGCTCCACTTGCTCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQRDRTMHLTFRGREGARAALKA*LHLLLA Trigger: TGCCAAGAGCAAGTGGAGGCAAGCCTTCAACGCAGC...TCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR CCA 90 bp | CCAGATGAGCACTATCTATGGACACTGCATGGAGCCACTGCACGTATGATGTGGCCTCTTGGCGGACACTaGGGCTGTGCAGGTTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PDEHYLWTLHGATARMMWPLGGH*GCAGSC Trigger: ACATGAACCTGCACAGCCCCAGTGTCCGCCAAGAGG...CCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATAGTGCTCATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
||
| CDS-3UTR CCA 90 bp | CCCATAAAGCTTTTCACAACAAACAACACGGACCCAGATGAGCACTATCTATGGGTGAGCGGCCACCACTaGGAGCTGAAGGCCGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PIKLFTTNNTDPDEHYLWVSGHH*ELKAGS Trigger: GCTCCCGGCCTTCAGCTCCCAGTGGTGGCCGCTCAC...CCATAGATAGTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTTTATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS-3UTR GCA 90 bp | TGTGAGTGTCTGCCCAGGCAGCAACAGCCCTACTGCCTCAGACCAGCTGCTTTGGACATGACTCCATTCTaGTCCATCTTGGATAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: CECLPRQQQPYCLRPAALDMTPF*SILDRP Trigger: TGGTCTATCCAAGATGGAGCAGAATGGAGTCATGTC...CAAAGCAGCTGGTCTGAGGCAGTAGGGCTGTTGCTGCCTGGGCAGACACTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CCA 90 bp | GCTAATCCTGGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCATCCTTCTCCAGCAGATaGCAAATAAAATCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ANPGGTDWSCECSQAPGASFSSR*QIKSLA Trigger: AGCCAAGGATTTTATTTGCCATCTGCTGGAGAAGGA...TGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCCAGGATTAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CCA 90 bp | GCAGGGAGAGAAGGCTCACAGTCCATAGTCACAGCTTTCTCTAGTCCACCATGGGGTGTACCGTTCGTTTaGGTCCTTCTCCAGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AGREGSQSIVTAFSSPPWGVPFV*VLLQQM Trigger: CATCTGCTGGAGAAGGACCCAAACGAACGGTACACC...CCATGGTGGACTAGAGAAAGCTGTGACTATGGACTGTGAGCCTTCTCTCCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR TCA 90 bp | CCTGGCCAGCCCATAAAGCTTTTCACAACAAACAACACGGACCCAGATGAGCACAGTTCTCCTCAGGGGTaGGGTACAGCAGGTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGQPIKLFTTNNTDPDEHSSPQG*GTAGFQ Trigger: CTGAAAACCTGCTGTACCTCACCCCTGAGGAGAACT...GTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTTTATGGGCTGGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR GCA 90 bp | GCAGGAGCGAGTCTGCAGAGCAGGGAGTCTGAGTTAGACTCCATATGGCTTTGCTTCCCAGTCACTCTTTaGTTCACCAGGAACACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGASLQSRESELDSIWLCFPVTL*FTRNTS Trigger: AGAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAA...GCAAAGCCATATGGAGTCTAACTCAGACTCCCTGCTCTGCAGACTCGCTCCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR GCA 90 bp | CATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTGGACGATCTCTGTGGACGATaGCATTCTCATGAAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: HPACGLRERPRLGLAPLDDLCGR*HSHEGI Trigger: AATACCTTCATGAGAATGGCATCGTCCACAGAGATC...GTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR GCA 90 bp | AGAGCTTTGGAGTGGCCTGGGTCTCCGTGCAGTGGGAAGCTAATCCTGGAGGAAGACATGACTCCATTCTaGTCCATCTTGGATAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: RALEWPGSPCSGKLILEEDMTPF*SILDRP Trigger: TGGTCTATCCAAGATGGAGCAGAATGGAGTCATGTC...TTCCTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCCAAAGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR TCA 90 bp | CAGGCAGGCCACTCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTCGTAGTAACCCTCTTTaGTCTTCTCAAAAAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGHSSCLWPQRTSKIGARSNPL*SSQKAL Trigger: CAAAGCTTTTTGAGAAGATCAAAGAGGGTTACTACG...AGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTGGCCTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR TCA 90 bp | CTGGAGGCAGGCAGGCCACTCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATAATAAAATCCTTGGCTaGCTCAGAAATGTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LEAGRPLILLVASENVQDNKILG*LRNVIP Trigger: TGGGATGACATTTCTGAGTCAGCCAAGGATTTTATT...ATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTGGCCTGCCTGCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CCA 90 bp | CCCATAAAGCTTTTCACAACAAACAACACGGACCCAGATGAGCACTATCTATGGCTGTTCTCCACCTCTTaGCGGACACTGGGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PIKLFTTNNTDPDEHYLWLFSTS*RTLGLC Trigger: GCACAGCCCCAGTGTCCGCCAAGAGGTGGAGAACAG...CCATAGATAGTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTTTATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS-3UTR GCA 90 bp | GAGAGCTTTGGAGTGGCCTGGGTCTCCGTGCAGTGGGAAGCTAATCCTGGAGGAGTCACAATGTTCTCATaGTTGATCCTTTTCAACACA | + |
|
Preference number: 4 (lower is better) Translates to: ESFGVAWVSVQWEANPGGVTMFS*LILFNT Trigger: TGTGTTGAAAAGGATCAAGCATGAGAACATTGTGAC...TCCTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCCAAAGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR TCA 90 bp | CCCATAAAGCTTTTCACAACAAACAACACGGACCCAGATGAGCACTATCTATGGACAAGACCTGCTGGATaGCCAGGCTGGCATCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PIKLFTTNNTDPDEHYLWTRPAG*PGWHPF Trigger: AAAAGGATGCCAGCCTGGTCATCCAGCAGGTCTTGT...CCATAGATAGTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTTTATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR GCA 90 bp | TATCTATGGACACTGCATGGAGCCACTGCACGTATGATGTGGGGAAGGGAATGGGATCTCTGTGGACGATaGCATTCTCATGAAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: YLWTLHGATARMMWGREWDLCGR*HSHEGI Trigger: AATACCTTCATGAGAATGGCATCGTCCACAGAGATC...CCATTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR TCA 90 bp | TATCTATGGACACTGCATGGAGCCACTGCACGTATGATGTGGGGAAGGGAATGGCGTAGTAACCCTCTTTaGTCTTCTCAAAAAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: YLWTLHGATARMMWGREWRSNPL*SSQKAL Trigger: CAAAGCTTTTTGAGAAGATCAAAGAGGGTTACTACG...CCATTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR TCA 90 bp | TATCTATGGACACTGCATGGAGCCACTGCACGTATGATGTGGGGAAGGGAATGGAATAAAATCCTTGGCTaGCTCAGAAATGTCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLWTLHGATARMMWGREWNKILG*LRNVIP Trigger: TGGGATGACATTTCTGAGTCAGCCAAGGATTTTATT...CCATTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS GCA 90 bp | CAGCTGGAGCAGCAGCCACAGGGCCCCGTGGCTAGGGGGCCCTGTTaGATGGGCACTAGGCTACTGCTGATGCGCAGGGAGCCGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QLEQQPQGPVARGPC*MGTRLLLMRREPLT Trigger: GGTCAACGGCTCCCTGCGCATCAGCAGTAGCCTAGTGCCCATGCAACAGGGCCCCCTAGCCACGGGGCCCTGTGGCTGCTGCTCCAGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 90 bp | GGTGTGCTTGGGTCCAGGATGGGGGCCTCTGTGATGGAGCTGTCATaGGAGTCTGGTCTGGAGACTTCAGGAGCAGGGGACACAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GVLGSRMGASVMELS*ESGLETSGAGDTGG Trigger: GCCACCTGTGTCCCCTGCTCCTGAAGTCTCCAGACCAGACTCCCATGACAGCTCCATCACAGAGGCCCCCATCCTGGACCCAAGCACACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 90 bp | GTCATGGGAGTCTGGTCTGGAGACTTCAGGAGCAGGGGACACAGGTaGCCTGTTCTCCACCTCTTGGCGGACACTGGGGCTGTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VMGVWSGDFRSRGHR*PVLHLLADTGAVQV Trigger: AACCTGCACAGCCCCAGTGTCCGCCAAGAGGTGGAGAACAGGCCACCTGTGTCCCCTGCTCCTGAAGTCTCCAGACCAGACTCCCATGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 90 bp | TGGGTCCAGGATGGGGGCCTCTGTGATGGAGCTGTCATGGGAGTCTaGTCTGGAGACTTCAGGAGCAGGGGACACAGGTGGCCTGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVQDGGLCDGAVMGV*SGDFRSRGHRWPVL Trigger: GAGAACAGGCCACCTGTGTCCCCTGCTCCTGAAGTCTCCAGACCAGACTCCCATGACAGCTCCATCACAGAGGCCCCCATCCTGGACCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS-3UTR CAA 90 bp | CTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGCGAATAGGCAGGTACTATGATCAGGAAGGGGTGTGCTaGGGTCCAGGATGGGGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPGPWCSLAFMRIGRYYDQEGVC*GPGWGP Trigger: AGGCCCCCATCCTGGACCCAAGCACACCCCTTCCTG...ATCATAGTACCTGCCTATTCGCATGAATGCCAGGCTGCACCAGGGGCCTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS TCA 90 bp | TCAGTGCAGGAAGGGGTGTGCTTGGGTCCAGGATGGGGGCCTCTGTaGTGGAGCTGTCATGGGAGTCTGGTCTGGAGACTTCAGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVQEGVCLGPGWGPL*WSCHGSLVWRLQEQ Trigger: CTGCTCCTGAAGTCTCCAGACCAGACTCCCATGACAGCTCCATCACAGAGGCCCCCATCCTGGACCCAAGCACACCCCTTCCTGCACTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 90 bp | TGGGATCACATAACGAGACACACCCCAGTCTGCCCACCCCGGCAGTaGGTGCTGCCACCAGCCTTCACTGGTACCATGACCTCTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: WDHITRHTPVCPPRQ*VLPPAFTGTMTSDL Trigger: CAAGTCAGAGGTCATGGTACCAGTGAAGGCTGGTGGCAGCACCCACTGCCGGGGTGGGCAGACTGGGGTGTGTCTCGTTATGTGATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | AGGCAGGCAGGCCACTCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGATGCGCAGGGAGCCGTaGACCAGGCAGTTGAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RQAGHSSCLWPQRTSKIGMRREP*TRQLSE Trigger: CTCACTCAACTGCCTGGTCAACGGCTCCCTGCGCAT...CCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTGGCCTGCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 90 bp | GAGACTTCAGGAGCAGGGGACACAGGTGGCCTGTTCTCCACCTCTTaGCGGACACTGGGGCTGTGCAGGTTCATGTGCAGTTTCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: ETSGAGDTGGLFSTS*RTLGLCRFMCSFLM Trigger: CATGAGGAAACTGCACATGAACCTGCACAGCCCCAGTGTCCGCCAAGAGGTGGAGAACAGGCCACCTGTGTCCCCTGCTCCTGAAGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 90 bp | CAGAGCAGTAGGAAGACTTTCCCTTGTTCCCAATATTTAGACAGCTaGAGCAGCAGCCACAGGGCCCCGTGGCTAGGGGGCCCTGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: QSSRKTFPCSQYLDS*SSSHRAPWLGGPVA Trigger: TGCAACAGGGCCCCCTAGCCACGGGGCCCTGTGGCTGCTGCTCCAGCTGTCTAAATATTGGGAACAAGGGAAAGTCTTCCTACTGCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS-3UTR CAA 90 bp | CTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGCGAATAGGCAGGTACTATGATAGCTGCGTTGAAGGCTaGCCTCCACTTGCTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPGPWCSLAFMRIGRYYDSCVEG*PPLALG Trigger: GCCAAGAGCAAGTGGAGGCAAGCCTTCAACGCAGCT...ATCATAGTACCTGCCTATTCGCATGAATGCCAGGCTGCACCAGGGGCCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS-3UTR CAA 90 bp | GGAGGAACGGACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCATAAGGTTTTCCTGATGTaGGTGGTCTGTTTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGTDWSCECSQAPGAAWHKVFLM*VVCFFQ Trigger: CTGGAAGAAACAGACCACCAACATCAGGAAAACCTT...ATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGTCCGTTCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | TATCTATGGACACTGCATGGAGCCACTGCACGTATGATGTGGGGAAGGGAATGGCCTGTTCTCCACCTCTaGGCGGACACTGGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: YLWTLHGATARMMWGREWPVLHL*ADTGAV Trigger: CACAGCCCCAGTGTCCGCCAAGAGGTGGAGAACAGG...CCATTCCCTTCCCCACATCATACGTGCAGTGGCTCCATGCAGTGTCCATAGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS-3UTR CAA 90 bp | ACTGGAGTTGTGAGTGCTCCCAGGCCCCTGGTGCAGCCTGGCATTCATGCGAATTTTCCCAGTCACTCTTaGCTTCACCAGGAACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: TGVVSAPRPLVQPGIHANFPSHS*LHQEHL Trigger: GAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAAA...ATTCGCATGAATGCCAGGCTGCACCAGGGGCCTGGGAGCACTCACAACTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | GCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTGGACTTCCTGTTTCCCAGTCACTCTTaGCTTCACCAGGAACACCTC | + |
|
Preference number: 5 (lower is better) Translates to: ACGLRERPRLGLAPLDFLFPSHS*LHQEHL Trigger: GAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAAA...CAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | CAAGATTGGGGCTGGCTCCTCTGGACTTCCTGTGAGTGTCTGCCCAGGCAGCAAACCATGACCTCTGACTaGAAGTTCCCTCCACTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QDWGWLLWTSCECLPRQQTMTSD*KFPPLA Trigger: AGCAAGTGGAGGGAACTTCAAGTCAGAGGTCATGGT...TTGCTGCCTGGGCAGACACTCACAGGAAGTCCAGAGGAGCCAGCCCCAATCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | TCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTGGATCAGTGATCATGATCTaGGAGTTCTCCTCAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSCLWPQRTSKIGAGSSGSVIMI*EFSSGV Trigger: CACCCCTGAGGAGAACTCCAAGATCATGATCACTGA...TCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | GCTTGTGGCCTCAGAGAACGTCCAAGATTGGGGCTGGCTCCTCTGGACTTCCTGCCATTCTGCTCCATCTaGGATAGACCAAAGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ACGLRERPRLGLAPLDFLPFCSI*DRPKSV Trigger: CACTGACTTTGGTCTATCCAAGATGGAGCAGAATGG...CAGGAAGTCCAGAGGAGCCAGCCCCAATCTTGGACGTTCTCTGAGGCCACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | TCCATATGGCTTTGCTTGAAGAAAGTGACACAGCCTGGCCAGCCCATAAAGCTTCCGTTGACCAGGCAGTaGAGTGAGCGGCCACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SIWLCLKKVTQPGQPIKLPLTRQ*SERPPL Trigger: CAGTGGTGGCCGCTCACTCAACTGCCTGGTCAACGG...AAGCTTTATGGGCTGGCCAGGCTGTGTCACTTTCTTCAAGCAAAGCCATATGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS-3UTR CAA 90 bp | GAGAGCTTTGGAGTGGCCTGGGTCTCCGTGCAGTGGGAAGCTAATCCTGGAGGAAAGGTTTTCCTGATGTaGGTGGTCTGTTTCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ESFGVAWVSVQWEANPGGKVFLM*VVCFFQ Trigger: CTGGAAGAAACAGACCACCAACATCAGGAAAACCTT...TCCTCCAGGATTAGCTTCCCACTGCACGGAGACCCAGGCCACTCCAAAGCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | GCAGGAGCGAGTCTGCAGAGCAGGGAGTCTGAGTTAGACTCCATATGGCTTTGCTCAGTGATCATGATCTaGGAGTTCTCCTCAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGASLQSRESELDSIWLCSVIMI*EFSSGV Trigger: CACCCCTGAGGAGAACTCCAAGATCATGATCACTGA...GCAAAGCCATATGGAGTCTAACTCAGACTCCCTGCTCTGCAGACTCGCTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | ACACAGAGAGACAGAACAATGCACCTGACTTTCAGGGGAAGGGAGGGAGCCAGACCATTCTGCTCCATCTaGGATAGACCAAAGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TQRDRTMHLTFRGREGARPFCSI*DRPKSV Trigger: CACTGACTTTGGTCTATCCAAGATGGAGCAGAATGG...TCTGGCTCCCTCCCTTCCCCTGAAAGTCAGGTGCATTGTTCTGTCTCTCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGGCAGGCAGGCCACTCATCCTGCTTGTGGCCTCAGAGAACGTCCAAGATTGGCAAATAAAATCCTaGGCTGACTCAGAAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEAGRPLILLVASENVQDWQIKS*ADSEMS Trigger: TGACATTTCTGAGTCAGCCAAGGATTTTATTTGCCA...ATCTTGGACGTTCTCTGAGGCCACAAGCAGGATGAGTGGCCTGCCTGCCTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | CCAGCAGGGAGAGAAGGCTCACAGTCCATAGTCACAGCTTTCTCTAGTCCACCAACAATGTTCTCATGCTaGATCCTTTTCAACACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PAGREGSQSIVTAFSSPPTMFSC*ILFNTA Trigger: CGCTGTGTTGAAAAGGATCAAGCATGAGAACATTGT...TGGTGGACTAGAGAAAGCTGTGACTATGGACTGTGAGCCTTCTCTCCCTGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS GCA 90 bp | GACTTCTTGATACATTTCAGAGCAAAGAGTTTCCCAGTCACTCTTTaGTTCACCAGGAACACCTCTGAGAAAGCTCCTGATCCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: DFLIHFRAKSFPVTL*FTRNTSEKAPDPST Trigger: AGTGCTGGGATCAGGAGCTTTCTCAGAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAAACTCTTTGCTCTGAAATGTATCAAGAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS-3UTR CAA 90 bp | CCCATAAAGCTTTTCACAACAAACAACACGGACCCAGATGAGCACTATCTATGGTGGCAAATAAAATCCTaGGCTGACTCAGAAATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PIKLFTTNNTDPDEHYLWWQIKS*ADSEMS Trigger: TGACATTTCTGAGTCAGCCAAGGATTTTATTTGCCA...CCATAGATAGTGCTCATCTGGGTCCGTGTTGTTTGTTGTGAAAAGCTTTATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
||
| CDS TCA 90 bp | AGACTCAAACTCGTAGTAACCCTCTTTGATCTTCTCAAAAAGCTTTaGTTCTGTTTCTTCATAGAAAGGGGGATAGCCACACAGCAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RLKLVVTLFDLLKKL*FCFFIERGIATQQY Trigger: ATACTGCTGTGTGGCTATCCCCCTTTCTATGAAGAAACAGAATCAAAGCTTTTTGAGAAGATCAAAGAGGGTTACTACGAGTTTGAGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000016323.11 ENSMUST00000163202.2 ENSMUST00000169907.8 |
||
| CDS GCA 72 bp | GGCTCCTGGGATCACATAACGAGACACACCCCAGTCTaGCCACCCCGGCAGTGGGTGCTGCCACCAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GSWDHITRHTPV*PPRQWVLPPAF Trigger: GAAGGCTGGTGGCAGCACCCACTGCCGGGGTGGGCAGACTGGGGTGTGTCTCGTTATGTGATCCCAGGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169907.8 |
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| CDS CAA 90 bp | GGCACTAGGCTACTGCTGATGCGCAGGGAGCCGTTGACCAGGCAGTaGAGTGAGCGGCCACCACTGGGAGCTGAAGGCCGGGAGCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: GTRLLLMRREPLTRQ*SERPPLGAEGRELC Trigger: ACACAGCTCCCGGCCTTCAGCTCCCAGTGGTGGCCGCTCACTCAACTGCCTGGTCAACGGCTCCCTGCGCATCAGCAGTAGCCTAGTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CAA 90 bp | CCCTGTTGCATGGGCACTAGGCTACTGCTGATGCGCAGGGAGCCGTaGACCAGGCAGTTGAGTGAGCGGCCACCACTGGGAGCTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: PCCMGTRLLLMRREP*TRQLSERPPLGAEG Trigger: GCCTTCAGCTCCCAGTGGTGGCCGCTCACTCAACTGCCTGGTCAACGGCTCCCTGCGCATCAGCAGTAGCCTAGTGCCCATGCAACAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 72 bp | GGAGCAGGGGACACAGGTGGCCTGTTCTCCACCTCTTaGCGGACACTGGGGCTGTGCAGGTTCATGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: GAGDTGGLFSTS*RTLGLCRFMCS Trigger: ACTGCACATGAACCTGCACAGCCCCAGTGTCCGCCAAGAGGTGGAGAACAGGCCACCTGTGTCCCCTGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 72 bp | GTCTGGTCTGGAGACTTCAGGAGCAGGGGACACAGGTaGCCTGTTCTCCACCTCTTGGCGGACACTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: VWSGDFRSRGHR*PVLHLLADTGA Trigger: AGCCCCAGTGTCCGCCAAGAGGTGGAGAACAGGCCACCTGTGTCCCCTGCTCCTGAAGTCTCCAGACCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 72 bp | GGGTCCAGGATGGGGGCCTCTGTGATGGAGCTGTCATaGGAGTCTGGTCTGGAGACTTCAGGAGCAGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: GSRMGASVMELS*ESGLETSGAGD Trigger: GTCCCCTGCTCCTGAAGTCTCCAGACCAGACTCCCATGACAGCTCCATCACAGAGGCCCCCATCCTGGACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 72 bp | ATAACGAGACACACCCCAGTCTGCCCACCCCGGCAGTaGGTGCTGCCACCAGCCTTCACTGGTACCATGACC | + |
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Preference number: 6 (lower is better) Translates to: ITRHTPVCPPRQ*VLPPAFTGTMT Trigger: GGTCATGGTACCAGTGAAGGCTGGTGGCAGCACCCACTGCCGGGGTGGGCAGACTGGGGTGTGTCTCGTTAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS CAA 72 bp | AGGAGCAGGGGACACAGGTGGCCTGTTCTCCACCTCTaGGCGGACACTGGGGCTGTGCAGGTTCATGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: RSRGHRWPVLHL*ADTGAVQVHVQ Trigger: CTGCACATGAACCTGCACAGCCCCAGTGTCCGCCAAGAGGTGGAGAACAGGCCACCTGTGTCCCCTGCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS TCA 72 bp | GAAGGGGTGTGCTTGGGTCCAGGATGGGGGCCTCTGTaGTGGAGCTGTCATGGGAGTCTGGTCTGGAGACTT | + |
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Preference number: 6 (lower is better) Translates to: EGVCLGPGWGPL*WSCHGSLVWRL Trigger: AAGTCTCCAGACCAGACTCCCATGACAGCTCCATCACAGAGGCCCCCATCCTGGACCCAAGCACACCCCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CAA 90 bp | GGAGACTTCAGGAGCAGGGGACACAGGTGGCCTGTTCTCCACCTCTaGGCGGACACTGGGGCTGTGCAGGTTCATGTGCAGTTTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GDFRSRGHRWPVLHL*ADTGAVQVHVQFPH Trigger: ATGAGGAAACTGCACATGAACCTGCACAGCCCCAGTGTCCGCCAAGAGGTGGAGAACAGGCCACCTGTGTCCCCTGCTCCTGAAGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 72 bp | AGGAAGACTTTCCCTTGTTCCCAATATTTAGACAGCTaGAGCAGCAGCCACAGGGCCCCGTGGCTAGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RKTFPCSQYLDS*SSSHRAPWLGG Trigger: GCCCCCTAGCCACGGGGCCCTGTGGCTGCTGCTCCAGCTGTCTAAATATTGGGAACAAGGGAAAGTCTTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS CCA 72 bp | ACACAGGTGGCCTGTTCTCCACCTCTTGGCGGACACTaGGGCTGTGCAGGTTCATGTGCAGTTTCCTCATGT | + |
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Preference number: 6 (lower is better) Translates to: TQVACSPPLGGH*GCAGSCAVSSC Trigger: ACATGAGGAAACTGCACATGAACCTGCACAGCCCCAGTGTCCGCCAAGAGGTGGAGAACAGGCCACCTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016323.11 |
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| CDS TCA 72 bp | CAGCACTTCTGGAGCTTCCTTCTTGAGATCCTTCCTTaGCTTCCCTTCACGATGGGCCACGTAGCCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: QHFWSFLLEILP*LPFTMGHVAWG Trigger: ACCCCAGGCTACGTGGCCCATCGTGAAGGGAAGTCAAGGAAGGATCTCAAGAAGGAAGCTCCAGAAGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163202.2 |
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| CDS TCA 72 bp | GGTGCTGCCACCAGCCTTCACTGGTACCATGACCTCTaGCTTGAAGTTCCCTCCACTTGCTCTTGGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: GAATSLHWYHDL*LEVPSTCSWQS Trigger: ACTTTGCCAAGAGCAAGTGGAGGGAACTTCAAGTCAGAGGTCATGGTACCAGTGAAGGCTGGTGGCAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169907.8 |
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| CDS CAA 90 bp | GCTCCTGATCCCAGCACTTCCATGAAGATGAAGGTTTTCCTGATGTaGGTGGTCTGTTTCTTCCAGGAACTGCAGTCCTCCTCCTCCTTA | + |
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Preference number: 6 (lower is better) Translates to: APDPSTSMKMKVFLM*VVCFFQELQSSSSL Trigger: TAAGGAGGAGGAGGACTGCAGTTCCTGGAAGAAACAGACCACCAACATCAGGAAAACCTTCATCTTCATGGAAGTGCTGGGATCAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS CCA 72 bp | GTGTCTGAGGGCTTTCTCGCAGGTGTACCGTTCGTTTaGGTCCTTCTCCAGCAGATGGCAAATAAAATCCTT | + |
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Preference number: 6 (lower is better) Translates to: VSEGFLAGVPFV*VLLQQMANKIL Trigger: AAGGATTTTATTTGCCATCTGCTGGAGAAGGACCCAAACGAACGGTACACCTGCGAGAAAGCCCTCAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000016323.11 ENSMUST00000163202.2 ENSMUST00000169907.8 |
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| CDS CAA 90 bp | GCGATCTCATTCTCTAGGCTGCTGTCCCGGAAGGCTGGTGACTTCTaGATACATTTCAGAGCAAAGAGTTTCCCAGTCACTCTTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: AISFSRLLSRKAGDF*IHFRAKSFPVTLCF Trigger: GAAGCAAAGAGTGACTGGGAAACTCTTTGCTCTGAAATGTATCAAGAAGTCACCAGCCTTCCGGGACAGCAGCCTAGAGAATGAGATCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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| CDS GCA 72 bp | ATACATTTCAGAGCAAAGAGTTTCCCAGTCACTCTTTaGTTCACCAGGAACACCTCTGAGAAAGCTCCTGAT | + |
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Preference number: 6 (lower is better) Translates to: IHFRAKSFPVTL*FTRNTSEKAPD Trigger: ATCAGGAGCTTTCTCAGAGGTGTTCCTGGTGAAGCAAAGAGTGACTGGGAAACTCTTTGCTCTGAAATGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016323.11 ENSMUST00000169907.8 |
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