Pregenerated sensors for CAMK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030272Ensembl transcript IDs: ENSMUST00000032409.15
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTTGCCCCTGCCCCTCCTaGCTGGTTCCCAGCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPCPCPS*LVPSCS Trigger: GCTGCAGCTGGGAACCAGTCAGGAGGGGCAGGGGCA...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGGTCAGCAGCTCCCCGTaGCTGCCAGTCTGCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMVSSSP*LPVCPC Trigger: GCAGGGGCAGACTGGCAGCCACGGGGAGCTGCTGAC...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGAGAGCTTGGGGGTGGTaGAGGGGGCAGTTCCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMRAWGW*RGQFRA Trigger: GGCTCGGAACTGCCCCCTGCACCACCCCCAAGCTCT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTCCTGCCCCTCCTGACTaGTTCCCAGCTGCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPPAPPD*FPAAAS Trigger: GGAAGCTGCAGCTGGGAACCAGTCAGGAGGGGCAGG...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGCAGCAGCCAGCTGCTaGCCCACCAGCTGTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPAAASC*PTSCWC Trigger: ACACCAACAGCTGGTGGGCCAGCAGCTGGCTGCTGC...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCATGGCCCTAGAGCTTaGGGGTGGTGCAGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMHGPRA*GWCRGQ Trigger: CTGCCCCCTGCACCACCCCCAAGCTCTAGGGCCATG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCCAGCACCTGGAAGATaGGGCGGCTGGCATCCCGTT | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMPAPGR*GGWHPV Trigger: AACGGGATGCCAGCCGCCTCATCTTCCAGGTGCTGG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGTGGCCCACCAGCTGTTaGTGTCAGCAGCTCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMWPTSC*CQQLPV Trigger: CACGGGGAGCTGCTGACACCAACAGCTGGTGGGCCA...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCCTAGAGCTTGGGGGTaGTGCAGGGGGCAGTTCCGA | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMPRAWG*CRGQFR Trigger: TCGGAACTGCCCCCTGCACCACCCCCAAGCTCTAGG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGGTCGTGCAGGTACTTaGCAGCATCCAGCACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPGRAGT*QHPAPG Trigger: TCCAGGTGCTGGATGCTGTCAAGTACCTGCACGACC...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTCTAATGTCTTCCGCCTaGTTCCACCTGGGGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPLMSSA*FHLGPS Trigger: GGAAGGCCCCAGGTGGAAGCAGGCGGAAGACATTAG...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGATCCCGGTGCACAATaGCCAGGTCGTGCAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPDPGAQ*PGRAGT Trigger: AGTACCTGCACGACCTGGGCATTGTGCACCGGGATC...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGGGCTTGAGATCCCGGTaGACAATGCCCAGGTCGTGC | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMGLRSR*TMPRSC Trigger: GCACGACCTGGGCATTGTGCACCGGGATCTCAAGCC...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTAGGGGCCACATATCCTaGAGTCCCACAGGCTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPRGHIS*SPTGCG Trigger: TCCACAGCCTGTGGGACTCCAGGATATGTGGCCCCT...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTTCTCGTTCTCCATGCTaGCTTCTTTGCCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPSRSPC*LLCPPG Trigger: CCCTGGAGGGCAAAGAAGGCAGCATGGAGAACGAGA...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCTGTGGAGAGCACACTaGCTGGGTCCTCCATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMLWRAH*LGPPSW Trigger: CCAAGATGGAGGACCCAGGCAGTGTGCTCTCCACAG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGCAATCCATGGGTGCTaGAAGGCCTGCTCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPAIHGC*KACSQV Trigger: TACCTGTGAGCAGGCCTTGCAGCACCCATGGATTGC...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCCTGCAATCCATGGGTaGTGCAAGGCCTGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMPAIHG*CKACSQ Trigger: CTGTGAGCAGGCCTTGCAGCACCCATGGATTGCAGG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTTGCAGCTTCCTCATGTaGCGAACCACAGCAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPCSFLM*RTTAVA Trigger: TGCCACTGCTGTGGTTCGGCACATGAGGAAGCTGCA...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGTACAGCAGGTTCTCTaGCTTGAGATCCCGGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPVQQVL*LEIPVH Trigger: GTGCACCGGGATCTCAAGCCAGAGAACCTGCTGTAC...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGGGAGAGCACACTGCCTaGGTCCTCCATCTTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMGEHTA*VLHLGE Trigger: CTCTCCAAGATGGAGGACCCAGGCAGTGTGCTCTCC...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTATCTCCTGCAATCCATaGGTGCTGCAAGGCCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPISCNP*VLQGLL Trigger: GAGCAGGCCTTGCAGCACCCATGGATTGCAGGAGAT...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGATGGCCACCAGTTTCTaGGTCCTCTTGTCCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMMATSF*VLLSSA Trigger: GGCAGAGGACAAGAGGACTCAGAAACTGGTGGCCAT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCCATGCTGCCTTCTTTaGCCTCCAGGGCTTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMPCCLL*PPGLSW Trigger: CCAAGAAAGCCCTGGAGGGCAAAGAAGGCAGCATGG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGGGGTGCTGCAAGGCCTaGTCACAGGTAAACCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMGCCKA*SQVNLF Trigger: GAAGAGGTTTACCTGTGAGCAGGCCTTGCAGCACCC...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCCACAGCAGTGGCATTaGAAGCTTGCTTCCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMPQQWH*KLASTC Trigger: GCAAGTGGAAGCAAGCTTTCAATGCCACTGCTGTGG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGACAATGCCCAGGTCGTaGAGGTACTTGACAGCATCC | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMTMPRS*RYLTAS Trigger: GGATGCTGTCAAGTACCTGCACGACCTGGGCATTGT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTTCTTGGCAATGCATTTaGTGGCCACCAGTTTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPSWQCI*WPPVSE Trigger: CTCAGAAACTGGTGGCCATCAAATGCATTGCCAAGA...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTCAATGTTGGGGTGCTTaGTCTTGTGTAAGACGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPQCWGA*SCVRRQ Trigger: TTGCCGTCTTACACAAGATCAAGCACCCCAACATTG...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGAAACAGCTCTCCACCTaGAACCAGCTGCATGATGAG | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMKQLST*NQLHDE Trigger: CTCATCATGCAGCTGGTTTCAGGTGGAGAGCTGTTT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTTGGCAAAGTTCTTCTTaGTCTGCTCGCTCACTGACT | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPWQSSS*SARSLT Trigger: AGTCAGTGAGCGAGCAGATCAAGAAGAACTTTGCCA...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGGATCTGCTCGCTCACTaGCTGGTGGATATTCTTATC | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMDLLAH*LVDILI Trigger: GATAAGAATATCCACCAGTCAGTGAGCGAGCAGATC...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGAAGTTCTTCTTGATCTaGTCGCTCACTGACTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMKFFLI*SLTDWW Trigger: CCACCAGTCAGTGAGCGAGCAGATCAAGAAGAACTT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGGTGGCATTGAAAGCTTaGTTCCACTTGCTCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMVALKA*FHLLLA Trigger: TGCCAAGAGCAAGTGGAAGCAAGCTTTCAATGCCAC...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGGCAGTATATAGGCAATaGCTCCTATGGACCAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMAVYRQ*LLWTSN Trigger: ATTGCTGGTCCATAGGAGTCATTGCCTATATACTGC...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGGCTACAATGTTGGGGTaGTTGATCTTGTGTAAGACG | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMATMLG*LILCKT Trigger: CGTCTTACACAAGATCAAGCACCCCAACATTGTAGC...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGTCGCTCACTGACTGGTaGATATTCTTATCCAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMSLTDW*IFLSRA Trigger: AGCTCTGGATAAGAATATCCACCAGTCAGTGAGCGA...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGTGCTCGCTCACTGACTaGTGGATATTCTTATCCAGA | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMCSLTD*WIFLSR Trigger: TCTGGATAAGAATATCCACCAGTCAGTGAGCGAGCA...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGAAGCTTGCTTCCACTTaGTCTTGGCAAAGTTCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMKLAST*SWQSSS Trigger: AGAAGAACTTTGCCAAGAGCAAGTGGAAGCAAGCTT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCAAAGTCAGAGATCATaGTTTTGGAGTCTTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: GSRLPPTPLMKETLTSLMQSQRS*FWSLHP Trigger: TGGATGAAGACTCCAAAATCATGATCTCTGACTTTG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR GCA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGTCAAACTCATACTCTaGCTTCAAAATCTGTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SGVRRKQAASNPSHERNPVKLIL*LQNLFK Trigger: TTTGAACAGATTTTGAAGGCAGAGTATGAGTTTGAC...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGCTGGCCCACCAGCTGTaGGTGTCAGCAGCTCCCCGT | + |
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Preference number: 5 (lower is better) Translates to: GSRLPPTPLMKETLTSLMLAHQL*VSAAPR Trigger: ACGGGGAGCTGCTGACACCAACAGCTGGTGGGCCAG...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTCCTGGGTCCTCCATCTaGGAGAGGCCAAAGTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SGVRRKQAASNPSHERNPPGSSI*ERPKSE Trigger: CTCTGACTTTGGCCTCTCCAAGATGGAGGACCCAGG...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGAGGTCGTGCAGGTACTaGACAGCATCCAGCACCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSRLPPTPLMKETLTSLMRSCRY*TASSTW Trigger: CCAGGTGCTGGATGCTGTCAAGTACCTGCACGACCT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGAGCAGGTTCTCTGGCTaGAGATCCCGGTGCACAATG | + |
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Preference number: 5 (lower is better) Translates to: GSRLPPTPLMKETLTSLMSRFSG*RSRCTM Trigger: CATTGTGCACCGGGATCTCAAGCCAGAGAACCTGCT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS TCA 90 bp | CCATGCTGCCTTCTTTGCCCTCCAGGGCTTTCTTGGCAATGCATTTaGTGGCCACCAGTTTCTGAGTCCTCTTGTCCTCTGCCAGGATCA | + |
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Preference number: 5 (lower is better) Translates to: PCCLLCPPGLSWQCI*WPPVSESSCPLPGS Trigger: TGATCCTGGCAGAGGACAAGAGGACTCAGAAACTGGTGGCCATCAAATGCATTGCCAAGAAAGCCCTGGAGGGCAAAGAAGGCAGCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTACAATGTTGGGGTGCTaGATCTTGTGTAAGACGGCA | + |
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Preference number: 5 (lower is better) Translates to: SGVRRKQAASNPSHERNPTMLGC*ILCKTA Trigger: TGCCGTCTTACACAAGATCAAGCACCCCAACATTGT...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGTCCAGGGCTACAATGTaGGGGTGCTTGATCTTGTGT | + |
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Preference number: 5 (lower is better) Translates to: GSRLPPTPLMKETLTSLMSRATM*GCLILC Trigger: ACACAAGATCAAGCACCCCAACATTGTAGCCCTGGA...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGACCACAGCAGTGGCATaGAAAGCTTGCTTCCACTTG | + |
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Preference number: 5 (lower is better) Translates to: GSRLPPTPLMKETLTSLMTTAVA*KACFHL Trigger: CAAGTGGAAGCAAGCTTTCAATGCCACTGCTGTGGT...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | TCTGGAGTGAGGAGGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTAAAGCTTGCTTCCACTaGCTCTTGGCAAAGTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: SGVRRKQAASNPSHERNPKACFH*LLAKFF Trigger: GAAGAACTTTGCCAAGAGCAAGTGGAAGCAAGCTTT...AGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCCTCCTCACTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS-3UTR CAA 90 bp | GGAAGCAGGCTGCCTCCAACCCCTCTCATGAAAGAAACCCTGACTTCCTTGATGTCAGAGATCATGATTTaGGAGTCTTCATCCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: GSRLPPTPLMKETLTSLMSEIMI*ESSSRL Trigger: CAGTCTGGATGAAGACTCCAAAATCATGATCTCTGA...CATCAAGGAAGTCAGGGTTTCTTTCATGAGAGGGGTTGGAGGCAGCCTGCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS GCA 72 bp | GCTGTATCTCCTGCAATCCATGGGTGCTGCAAGGCCTaGTCACAGGTAAACCTCTTCTCCGGGTCTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: AVSPAIHGCCKA*SQVNLFSGSFS Trigger: GGAGAAAGACCCGGAGAAGAGGTTTACCTGTGAGCAGGCCTTGCAGCACCCATGGATTGCAGGAGATACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS TCA 72 bp | TTTCTGAGTCCTCTTGTCCTCTGCCAGGATCACTTCTaGGAAGGCACCCGTGCCCAGAACATCTCTGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLSPLVLCQDHF*EGTRAQNISEV Trigger: GACTTCAGAGATGTTCTGGGCACGGGTGCCTTCTCAGAAGTGATCCTGGCAGAGGACAAGAGGACTCAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS TCA 72 bp | CTTCTTTGCCCTCCAGGGCTTTCTTGGCAATGCATTTaGTGGCCACCAGTTTCTGAGTCCTCTTGTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LLCPPGLSWQCI*WPPVSESSCPL Trigger: CAGAGGACAAGAGGACTCAGAAACTGGTGGCCATCAAATGCATTGCCAAGAAAGCCCTGGAGGGCAAAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS TCA 72 bp | GCTTTCTTGGCAATGCATTTGATGGCCACCAGTTTCTaGGTCCTCTTGTCCTCTGCCAGGATCACTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AFLAMHLMATSF*VLLSSARITSE Trigger: CTCAGAAGTGATCCTGGCAGAGGACAAGAGGACTCAGAAACTGGTGGCCATCAAATGCATTGCCAAGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS TCA 72 bp | CATAGATGTCATCCAGGGCTACAATGTTGGGGTGCTTaGTCTTGTGTAAGACGGCAATCTCGTTCTCCATGC | + |
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Preference number: 6 (lower is better) Translates to: HRCHPGLQCWGA*SCVRRQSRSPC Trigger: GCATGGAGAACGAGATTGCCGTCTTACACAAGATCAAGCACCCCAACATTGTAGCCCTGGATGACATCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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| CDS TCA 72 bp | ACCTCTTCTCCGGGTCTTTCTCCATCAAATGTCGTATaGAATCTTTGGCAGAGTCAGAGATGTCGTCCCAAT | + |
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Preference number: 6 (lower is better) Translates to: TSSPGLSPSNVV*NLWQSQRCRPN Trigger: ATTGGGACGACATCTCTGACTCTGCCAAAGATTTCATACGACATTTGATGGAGAAAGACCCGGAGAAGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032409.15 |
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